8-17739538-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739538
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739538
    reference: chr 8
allele count: 67373
allele frequency: 5.552140161191963e-1
allele num: 121346
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.214A>G
  hgvsp: ENSP00000428430.1:p.Ile72Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.214A>G
  hgvsp: ENSP00000381133.2:p.Ile72Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.214A>G
  hgvsp: ENSP00000401952.1:p.Ile72Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.214A>G
  hgvsp: ENSP00000429757.1:p.Ile72Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.214A>G
  hgvsp: ENSP00000371262.2:p.Ile72Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.214A>G
  hgvsp: ENSP00000371263.2:p.Ile72Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.214A>G
  hgvsp: ENSP00000381131.1:p.Ile72Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.137A>G
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 7.25e1
  variant carriers: 1718
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 2.75e1
  variant carriers: 213
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 3.75e1
  variant carriers: 632
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 3.25e1
  variant carriers: 375
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 9.25e1
  variant carriers: 2587
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 8.25e1
  variant carriers: 2286
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 2.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 4.75e1
  variant carriers: 936
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 6.75e1
  variant carriers: 1516
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 4.25e1
  variant carriers: 766
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 6.25e1
  variant carriers: 1276
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 5.75e1
  variant carriers: 1122
genotype depth: GenotypeDepth
  all individuals: 28146
  bin: 9.75e1
  variant carriers: 28050
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 7.75e1
  variant carriers: 1919
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 5.25e1
  variant carriers: 1048
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 8.75e1
  variant carriers: 2489
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 51023
  bin: 9.75e1
  variant carriers: 46823
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 3
hgvs: p.Ile72Val
num of homozygotes: 20309
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ

8-17739539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739539
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739539
    reference: chr 8
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.213C>T
  hgvsp: ENST00000381840.2:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.213C>T
  hgvsp: ENST00000518650.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.136C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.213C>T
  hgvsp: ENST00000398054.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.213C>T
  hgvsp: ENST00000427924.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.213C>T
  hgvsp: ENST00000522444.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.213C>T
  hgvsp: ENST00000381841.2:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.213C>T
  hgvsp: ENST00000398056.2:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11794
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2776
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val71Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

8-17739546-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739546
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739546
    reference: chr 8
allele count: 6
allele frequency: 4.943072284193702e-5
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.206A>G
  hgvsp: ENSP00000401952.1:p.Asn69Ser
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.206A>G
  hgvsp: ENSP00000381133.2:p.Asn69Ser
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.206A>G
  hgvsp: ENSP00000428430.1:p.Asn69Ser
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.206A>G
  hgvsp: ENSP00000381131.1:p.Asn69Ser
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.206A>G
  hgvsp: ENSP00000429757.1:p.Asn69Ser
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.206A>G
  hgvsp: ENSP00000371262.2:p.Asn69Ser
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.206A>G
  hgvsp: ENSP00000371263.2:p.Asn69Ser
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.129A>G
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2777
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3897
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn69Ser
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

8-17739551-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739551
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739551
    reference: chr 8
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.201T>C
  hgvsp: ENST00000381840.2:c.201T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.201T>C
  hgvsp: ENST00000518650.1:c.201T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.124T>C
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.201T>C
  hgvsp: ENST00000381841.2:c.201T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.201T>C
  hgvsp: ENST00000427924.1:c.201T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.201T>C
  hgvsp: ENST00000522444.1:c.201T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.201T>C
  hgvsp: ENST00000398054.1:c.201T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.201T>C
  hgvsp: ENST00000398056.2:c.201T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5153
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17126
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2283
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp67Asp
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

8-17739552-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739552
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739552
    reference: chr 8
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.200A>T
  hgvsp: ENSP00000371262.2:p.Asp67Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.200A>T
  hgvsp: ENSP00000428430.1:p.Asp67Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.200A>T
  hgvsp: ENSP00000401952.1:p.Asp67Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.200A>T
  hgvsp: ENSP00000429757.1:p.Asp67Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.200A>T
  hgvsp: ENSP00000381131.1:p.Asp67Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.123A>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.200A>T
  hgvsp: ENSP00000381133.2:p.Asp67Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.200A>T
  hgvsp: ENSP00000371263.2:p.Asp67Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.1T>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5153
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7636
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp67Val
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/8-17739568-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739568
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739568
    reference: chr 8
allele count: 2
allele frequency: 1.647527884409444e-5
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.107T>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.184T>G
  hgvsp: ENSP00000401952.1:p.Phe62Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.184T>G
  hgvsp: ENSP00000429757.1:p.Phe62Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.17A>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.184T>G
  hgvsp: ENSP00000371262.2:p.Phe62Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.184T>G
  hgvsp: ENSP00000381131.1:p.Phe62Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.184T>G
  hgvsp: ENSP00000428430.1:p.Phe62Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.184T>G
  hgvsp: ENSP00000381133.2:p.Phe62Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.184T>G
  hgvsp: ENSP00000371263.2:p.Phe62Val
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3978
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7635
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe62Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

8-17739571-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739571
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739571
    reference: chr 8
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.181C>G
  hgvsp: ENSP00000371262.2:p.Gln61Glu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.181C>G
  hgvsp: ENSP00000401952.1:p.Gln61Glu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.181C>G
  hgvsp: ENSP00000428430.1:p.Gln61Glu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.181C>G
  hgvsp: ENSP00000381133.2:p.Gln61Glu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.181C>G
  hgvsp: ENSP00000429757.1:p.Gln61Glu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.181C>G
  hgvsp: ENSP00000371263.2:p.Gln61Glu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.20G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.181C>G
  hgvsp: ENSP00000381131.1:p.Gln61Glu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.104C>G
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7634
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18875
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln61Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

8-17739574-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739574
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739574
    reference: chr 8
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.178G>A
  hgvsp: ENSP00000429757.1:p.Val60Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.178G>A
  hgvsp: ENSP00000381133.2:p.Val60Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.101G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.23C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.178G>A
  hgvsp: ENSP00000371263.2:p.Val60Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.178G>A
  hgvsp: ENSP00000371262.2:p.Val60Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.178G>A
  hgvsp: ENSP00000381131.1:p.Val60Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.178G>A
  hgvsp: ENSP00000401952.1:p.Val60Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.178G>A
  hgvsp: ENSP00000428430.1:p.Val60Ile
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4833
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val60Ile
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

8-17739577-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739577
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739577
    reference: chr 8
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.175G>A
  hgvsp: ENSP00000381133.2:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.98G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.175G>A
  hgvsp: ENSP00000429757.1:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.175G>A
  hgvsp: ENSP00000381131.1:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.175G>A
  hgvsp: ENSP00000371263.2:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.175G>A
  hgvsp: ENSP00000371262.2:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.175G>A
  hgvsp: ENSP00000428430.1:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.26C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.175G>A
  hgvsp: ENSP00000401952.1:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3896
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu59Lys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

8-17739585-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739585
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739585
    reference: chr 8
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.34T>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.167A>C
  hgvsp: ENSP00000371263.2:p.Gln56Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.167A>C
  hgvsp: ENSP00000381133.2:p.Gln56Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.167A>C
  hgvsp: ENSP00000381131.1:p.Gln56Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.167A>C
  hgvsp: ENSP00000371262.2:p.Gln56Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.90A>C
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.167A>C
  hgvsp: ENSP00000429757.1:p.Gln56Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.167A>C
  hgvsp: ENSP00000401952.1:p.Gln56Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.167A>C
  hgvsp: ENSP00000428430.1:p.Gln56Pro
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17175
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2769
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln56Pro
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

8-17739594-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739594
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739594
    reference: chr 8
allele count: 27
allele frequency: 2.224235933767197e-4
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.158A>G
  hgvsp: ENSP00000371263.2:p.Gln53Arg
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.158A>G
  hgvsp: ENSP00000381133.2:p.Gln53Arg
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.158A>G
  hgvsp: ENSP00000401952.1:p.Gln53Arg
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.158A>G
  hgvsp: ENSP00000371262.2:p.Gln53Arg
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.158A>G
  hgvsp: ENSP00000429757.1:p.Gln53Arg
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.81A>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.158A>G
  hgvsp: ENSP00000428430.1:p.Gln53Arg
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.158A>G
  hgvsp: ENSP00000381131.1:p.Gln53Arg
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.43T>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 11813
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7630
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18877
  bin: 9.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln53Arg
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

8-17739603-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739603
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739603
    reference: chr 8
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.52T>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.149A>T
  hgvsp: ENSP00000371262.2:p.Lys50Met
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.149A>T
  hgvsp: ENSP00000429757.1:p.Lys50Met
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.72A>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.149A>T
  hgvsp: ENSP00000381133.2:p.Lys50Met
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.149A>T
  hgvsp: ENSP00000401952.1:p.Lys50Met
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.149A>T
  hgvsp: ENSP00000381131.1:p.Lys50Met
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.149A>T
  hgvsp: ENSP00000371263.2:p.Lys50Met
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.149A>T
  hgvsp: ENSP00000428430.1:p.Lys50Met
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2279
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys50Met
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

8-17739605-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739605
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739605
    reference: chr 8
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.147C>G
  hgvsp: ENST00000398056.2:c.147C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.70C>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.147C>G
  hgvsp: ENST00000398054.1:c.147C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.147C>G
  hgvsp: ENST00000381841.2:c.147C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.147C>G
  hgvsp: ENST00000522444.1:c.147C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.54G>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.147C>G
  hgvsp: ENST00000427924.1:c.147C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.147C>G
  hgvsp: ENST00000381840.2:c.147C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.147C>G
  hgvsp: ENST00000518650.1:c.147C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3991
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2764
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17186
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val49Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum

8-17739609-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739609
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739609
    reference: chr 8
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.143A>C
  hgvsp: ENSP00000371262.2:p.Gln48Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.66A>C
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.143A>C
  hgvsp: ENSP00000429757.1:p.Gln48Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.143A>C
  hgvsp: ENSP00000371263.2:p.Gln48Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.143A>C
  hgvsp: ENSP00000428430.1:p.Gln48Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.143A>C
  hgvsp: ENSP00000381131.1:p.Gln48Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.58T>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.143A>C
  hgvsp: ENSP00000401952.1:p.Gln48Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.143A>C
  hgvsp: ENSP00000381133.2:p.Gln48Pro
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12584
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3899
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17173
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln48Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

8-17739611-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739611
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739611
    reference: chr 8
allele count: 2
allele frequency: 1.647799363949445e-5
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.141A>G
  hgvsp: ENST00000518650.1:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.64A>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.141A>G
  hgvsp: ENST00000522444.1:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.141A>G
  hgvsp: ENST00000381841.2:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.141A>G
  hgvsp: ENST00000381840.2:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.141A>G
  hgvsp: ENST00000398054.1:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.60T>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.141A>G
  hgvsp: ENST00000427924.1:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.141A>G
  hgvsp: ENST00000398056.2:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4827
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2279
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln47Gln
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

8-17739612-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739612
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739612
    reference: chr 8
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.61T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.140A>G
  hgvsp: ENSP00000371262.2:p.Gln47Arg
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.63A>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.140A>G
  hgvsp: ENSP00000381133.2:p.Gln47Arg
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.140A>G
  hgvsp: ENSP00000371263.2:p.Gln47Arg
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.140A>G
  hgvsp: ENSP00000428430.1:p.Gln47Arg
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.140A>G
  hgvsp: ENSP00000429757.1:p.Gln47Arg
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.140A>G
  hgvsp: ENSP00000381131.1:p.Gln47Arg
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.140A>G
  hgvsp: ENSP00000401952.1:p.Gln47Arg
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17187
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln47Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

8-17739612-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739612
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739612
    reference: chr 8
allele count: 6
allele frequency: 4.943398091848337e-5
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.140A>C
  hgvsp: ENSP00000428430.1:p.Gln47Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.140A>C
  hgvsp: ENSP00000381133.2:p.Gln47Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.140A>C
  hgvsp: ENSP00000401952.1:p.Gln47Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.140A>C
  hgvsp: ENSP00000371262.2:p.Gln47Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.61T>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.140A>C
  hgvsp: ENSP00000371263.2:p.Gln47Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.140A>C
  hgvsp: ENSP00000381131.1:p.Gln47Pro
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.63A>C
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.140A>C
  hgvsp: ENSP00000429757.1:p.Gln47Pro
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3899
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4828
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln47Pro
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

8-17739624-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739624
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739624
    reference: chr 8
allele count: 122
allele frequency: 1.005306700945977e-3
allele num: 121356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.128G>A
  hgvsp: ENSP00000428430.1:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.128G>A
  hgvsp: ENSP00000381133.2:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.128G>A
  hgvsp: ENSP00000381131.1:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.128G>A
  hgvsp: ENSP00000371262.2:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.51G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.128G>A
  hgvsp: ENSP00000371263.2:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.128G>A
  hgvsp: ENSP00000401952.1:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.128G>A
  hgvsp: ENSP00000429757.1:p.Arg43Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.73C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11781
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7627
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9551
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12570
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 9.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 6271
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg43Gln
num of homozygotes: 1
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

8-17739625-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739625
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739625
    reference: chr 8
allele count: 29
allele frequency: 2.389742237457973e-4
allele num: 121352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.127C>T
  hgvsp: ENSP00000429757.1:p.Arg43Trp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.127C>T
  hgvsp: ENSP00000428430.1:p.Arg43Trp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.127C>T
  hgvsp: ENSP00000371263.2:p.Arg43Trp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.127C>T
  hgvsp: ENSP00000401952.1:p.Arg43Trp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.74G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.127C>T
  hgvsp: ENSP00000381133.2:p.Arg43Trp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.127C>T
  hgvsp: ENSP00000371262.2:p.Arg43Trp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.127C>T
  hgvsp: ENSP00000381131.1:p.Arg43Trp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.50C>T
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3150
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9560
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7641
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11813
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4502
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17212
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg43Trp
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

8-17739627-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739627
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739627
    reference: chr 8
allele count: 2
allele frequency: 1.648179585647652e-5
allele num: 121346
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.125C>G
  hgvsp: ENSP00000381133.2:p.Thr42Ser
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.125C>G
  hgvsp: ENSP00000428430.1:p.Thr42Ser
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.125C>G
  hgvsp: ENSP00000401952.1:p.Thr42Ser
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.125C>G
  hgvsp: ENSP00000371262.2:p.Thr42Ser
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.125C>G
  hgvsp: ENSP00000371263.2:p.Thr42Ser
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.125C>G
  hgvsp: ENSP00000381131.1:p.Thr42Ser
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.76G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.125C>G
  hgvsp: ENSP00000429757.1:p.Thr42Ser
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.48C>G
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2758
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr42Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

8-17739631-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739631
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739631
    reference: chr 8
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.121G>C
  hgvsp: ENSP00000428430.1:p.Glu41Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.44G>C
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.121G>C
  hgvsp: ENSP00000371262.2:p.Glu41Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.121G>C
  hgvsp: ENSP00000401952.1:p.Glu41Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.121G>C
  hgvsp: ENSP00000381133.2:p.Glu41Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.121G>C
  hgvsp: ENSP00000371263.2:p.Glu41Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.121G>C
  hgvsp: ENSP00000429757.1:p.Glu41Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.121G>C
  hgvsp: ENSP00000381131.1:p.Glu41Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.80C>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4502
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu41Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

8-17739634-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739634
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739634
    reference: chr 8
allele count: 2
allele frequency: 1.648342591524222e-5
allele num: 121334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.118C>T
  hgvsp: ENSP00000371263.2:p.Leu40Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.41C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.118C>T
  hgvsp: ENSP00000428430.1:p.Leu40Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.118C>T
  hgvsp: ENSP00000381131.1:p.Leu40Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.118C>T
  hgvsp: ENSP00000429757.1:p.Leu40Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.118C>T
  hgvsp: ENSP00000401952.1:p.Leu40Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.83G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.118C>T
  hgvsp: ENSP00000381133.2:p.Leu40Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.118C>T
  hgvsp: ENSP00000371262.2:p.Leu40Phe
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu40Phe
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/8-17739639-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739639
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739639
    reference: chr 8
allele count: 3304
allele frequency: 2.723555790029016e-2
allele num: 121312
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.113G>T
  hgvsp: ENSP00000381133.2:p.Arg38Leu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.113G>T
  hgvsp: ENSP00000428430.1:p.Arg38Leu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.88C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.113G>T
  hgvsp: ENSP00000381131.1:p.Arg38Leu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.113G>T
  hgvsp: ENSP00000429757.1:p.Arg38Leu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.113G>T
  hgvsp: ENSP00000401952.1:p.Arg38Leu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.113G>T
  hgvsp: ENSP00000371263.2:p.Arg38Leu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.113G>T
  hgvsp: ENSP00000371262.2:p.Arg38Leu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.36G>T
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.75e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 11644
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 7470
  bin: 4.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12413
  bin: 3.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 5009
  bin: 4.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.25e1
  variant carriers: 225
genotype depth: GenotypeDepth
  all individuals: 9376
  bin: 3.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 5.25e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 6.25e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 8.75e1
  variant carriers: 259
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 7.25e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 3742
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 9.75e1
  variant carriers: 1442
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.75e1
  variant carriers: 231
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 248
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg38Leu
num of homozygotes: 77
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

8-17739639-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739639
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739639
    reference: chr 8
allele count: 3
allele frequency: 2.472962279082036e-5
allele num: 121312
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.113G>A
  hgvsp: ENSP00000401952.1:p.Arg38His
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.36G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.113G>A
  hgvsp: ENSP00000381133.2:p.Arg38His
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.113G>A
  hgvsp: ENSP00000428430.1:p.Arg38His
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.113G>A
  hgvsp: ENSP00000371263.2:p.Arg38His
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.113G>A
  hgvsp: ENSP00000371262.2:p.Arg38His
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.113G>A
  hgvsp: ENSP00000381131.1:p.Arg38His
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.113G>A
  hgvsp: ENSP00000429757.1:p.Arg38His
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.88C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5009
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12413
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11644
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg38His
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

8-17739640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739640
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739640
    reference: chr 8
allele count: 2
allele frequency: 1.648559982854976e-5
allele num: 121318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.112C>T
  hgvsp: ENSP00000371262.2:p.Arg38Cys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.112C>T
  hgvsp: ENSP00000381133.2:p.Arg38Cys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.112C>T
  hgvsp: ENSP00000401952.1:p.Arg38Cys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.112C>T
  hgvsp: ENSP00000428430.1:p.Arg38Cys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.112C>T
  hgvsp: ENSP00000429757.1:p.Arg38Cys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.112C>T
  hgvsp: ENSP00000371263.2:p.Arg38Cys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.89G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.112C>T
  hgvsp: ENSP00000381131.1:p.Arg38Cys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.35C>T
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9826
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7767
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6570
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2331
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg38Cys
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

8-17739642-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739642
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739642
    reference: chr 8
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.110T>C
  hgvsp: ENSP00000381133.2:p.Val37Ala
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.110T>C
  hgvsp: ENSP00000371262.2:p.Val37Ala
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.110T>C
  hgvsp: ENSP00000429757.1:p.Val37Ala
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.91A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.110T>C
  hgvsp: ENSP00000371263.2:p.Val37Ala
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.110T>C
  hgvsp: ENSP00000401952.1:p.Val37Ala
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.110T>C
  hgvsp: ENSP00000428430.1:p.Val37Ala
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.110T>C
  hgvsp: ENSP00000381131.1:p.Val37Ala
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.33T>C
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 9822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2877
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val37Ala
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/8-17739642-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739642
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739641
    reference: chr 8
allele count: 3
allele frequency: 2.472880741204788e-5
allele num: 121316
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.93delC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.109delG
  hgvsp: ENSP00000371262.2:p.Val37CysfsTer86
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.109delG
  hgvsp: ENSP00000381131.1:p.Val37CysfsTer86
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.109delG
  hgvsp: ENSP00000371263.2:p.Val37CysfsTer86
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.109delG
  hgvsp: ENSP00000428430.1:p.Val37CysfsTer86
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.109delG
  hgvsp: ENSP00000401952.1:p.Val37CysfsTer86
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.109delG
  hgvsp: ENSP00000381133.2:p.Val37CysfsTer86
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.32delG
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.109delG
  hgvsp: ENSP00000429757.1:p.Val37CysfsTer86
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 12488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2877
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val37CysfsTer86
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: AC
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ

8-17739643-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739643
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739643
    reference: chr 8
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.109G>A
  hgvsp: ENSP00000428430.1:p.Val37Met
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.109G>A
  hgvsp: ENSP00000381133.2:p.Val37Met
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.92C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.109G>A
  hgvsp: ENSP00000401952.1:p.Val37Met
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.109G>A
  hgvsp: ENSP00000429757.1:p.Val37Met
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.32G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.109G>A
  hgvsp: ENSP00000381131.1:p.Val37Met
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.109G>A
  hgvsp: ENSP00000371262.2:p.Val37Met
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.109G>A
  hgvsp: ENSP00000371263.2:p.Val37Met
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5160
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val37Met
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

8-17739645-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739645
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739645
    reference: chr 8
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.107A>T
  hgvsp: ENSP00000381131.1:p.Gln36Leu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.107A>T
  hgvsp: ENSP00000381133.2:p.Gln36Leu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.94T>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.107A>T
  hgvsp: ENSP00000371263.2:p.Gln36Leu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.107A>T
  hgvsp: ENSP00000429757.1:p.Gln36Leu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.107A>T
  hgvsp: ENSP00000428430.1:p.Gln36Leu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.107A>T
  hgvsp: ENSP00000371262.2:p.Gln36Leu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.30A>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.107A>T
  hgvsp: ENSP00000401952.1:p.Gln36Leu
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7769
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13188
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln36Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

8-17739646-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739646
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739646
    reference: chr 8
allele count: 1
allele frequency: 8.244566830458728e-6
allele num: 121292
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.106C>T
  hgvsp: ENSP00000381131.1:p.Gln36Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.106C>T
  hgvsp: ENSP00000401952.1:p.Gln36Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.106C>T
  hgvsp: ENSP00000371263.2:p.Gln36Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.106C>T
  hgvsp: ENSP00000381133.2:p.Gln36Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.106C>T
  hgvsp: ENSP00000429757.1:p.Gln36Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.106C>T
  hgvsp: ENSP00000428430.1:p.Gln36Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.95G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.29C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.106C>T
  hgvsp: ENSP00000371262.2:p.Gln36Ter
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5022
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6570
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln36Ter
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

8-17739647-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739647
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739647
    reference: chr 8
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.105C>G
  hgvsp: ENST00000381840.2:c.105C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.96G>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.105C>G
  hgvsp: ENST00000398054.1:c.105C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.105C>G
  hgvsp: ENST00000522444.1:c.105C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.105C>G
  hgvsp: ENST00000427924.1:c.105C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.105C>G
  hgvsp: ENST00000518650.1:c.105C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.105C>G
  hgvsp: ENST00000398056.2:c.105C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.28C>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.105C>G
  hgvsp: ENST00000381841.2:c.105C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18090
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala35Ala
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/8-17739651-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739651
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739651
    reference: chr 8
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.101G>T
  hgvsp: ENSP00000381131.1:p.Arg34Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.101G>T
  hgvsp: ENSP00000429757.1:p.Arg34Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.101G>T
  hgvsp: ENSP00000371262.2:p.Arg34Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.101G>T
  hgvsp: ENSP00000381133.2:p.Arg34Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.101G>T
  hgvsp: ENSP00000401952.1:p.Arg34Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.100C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.101G>T
  hgvsp: ENSP00000371263.2:p.Arg34Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.101G>T
  hgvsp: ENSP00000428430.1:p.Arg34Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.24G>T
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg34Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

8-17739651-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739651
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739651
    reference: chr 8
allele count: 52
allele frequency: 4.287811072447515e-4
allele num: 121274
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.101G>C
  hgvsp: ENSP00000429757.1:p.Arg34Thr
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.100C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.101G>C
  hgvsp: ENSP00000371262.2:p.Arg34Thr
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.24G>C
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.101G>C
  hgvsp: ENSP00000401952.1:p.Arg34Thr
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.101G>C
  hgvsp: ENSP00000428430.1:p.Arg34Thr
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.101G>C
  hgvsp: ENSP00000381133.2:p.Arg34Thr
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.101G>C
  hgvsp: ENSP00000371263.2:p.Arg34Thr
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.101G>C
  hgvsp: ENSP00000381131.1:p.Arg34Thr
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7765
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 13176
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 9827
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg34Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/8-17739656-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739656
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739656
    reference: chr 8
allele count: 1
allele frequency: 8.249191579225235e-6
allele num: 121224
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.96G>T
  hgvsp: ENST00000398054.1:c.96G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.96G>T
  hgvsp: ENST00000427924.1:c.96G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.96G>T
  hgvsp: ENST00000381841.2:c.96G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.96G>T
  hgvsp: ENST00000518650.1:c.96G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.96G>T
  hgvsp: ENST00000522444.1:c.96G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.105C>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.96G>T
  hgvsp: ENST00000381840.2:c.96G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.96G>T
  hgvsp: ENST00000398056.2:c.96G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.19G>T
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg32Arg
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

8-17739658-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739658
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739658
    reference: chr 8
allele count: 13
allele frequency: 1.072518769078459e-4
allele num: 121210
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.107G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.94C>T
  hgvsp: ENSP00000381133.2:p.Arg32Trp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.94C>T
  hgvsp: ENSP00000371263.2:p.Arg32Trp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.94C>T
  hgvsp: ENSP00000381131.1:p.Arg32Trp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.94C>T
  hgvsp: ENSP00000428430.1:p.Arg32Trp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.94C>T
  hgvsp: ENSP00000401952.1:p.Arg32Trp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.94C>T
  hgvsp: ENSP00000429757.1:p.Arg32Trp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.94C>T
  hgvsp: ENSP00000371262.2:p.Arg32Trp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.17C>T
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12420
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7766
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13164
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3979
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4636
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5012
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg32Trp
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

8-17739658-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739658
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739658
    reference: chr 8
allele count: 19
allele frequency: 1.567527431730055e-4
allele num: 121210
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.94C>A
  hgvsp: ENST00000381840.2:c.94C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.94C>A
  hgvsp: ENST00000381841.2:c.94C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.94C>A
  hgvsp: ENST00000398054.1:c.94C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.94C>A
  hgvsp: ENST00000427924.1:c.94C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.94C>A
  hgvsp: ENST00000398056.2:c.94C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.17C>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.94C>A
  hgvsp: ENST00000518650.1:c.94C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.94C>A
  hgvsp: ENST00000522444.1:c.94C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.107G>T
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13164
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12420
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2860
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg32Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

8-17739659-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739659
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739659
    reference: chr 8
allele count: 2
allele frequency: 1.650083329208125e-5
allele num: 121206
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.93G>A
  hgvsp: ENSP00000429757.1:p.Met31Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.93G>A
  hgvsp: ENSP00000381131.1:p.Met31Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.93G>A
  hgvsp: ENSP00000371262.2:p.Met31Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.93G>A
  hgvsp: ENSP00000381133.2:p.Met31Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.16G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.108C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.93G>A
  hgvsp: ENSP00000401952.1:p.Met31Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.93G>A
  hgvsp: ENSP00000428430.1:p.Met31Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.93G>A
  hgvsp: ENSP00000371263.2:p.Met31Ile
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18090
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2863
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Met31Ile
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

8-17739662-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739662
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739662
    reference: chr 8
allele count: 21
allele frequency: 1.732987836075855e-4
allele num: 121178
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.90G>C
  hgvsp: ENSP00000429757.1:p.Gln30His
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.13G>C
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.90G>C
  hgvsp: ENSP00000381131.1:p.Gln30His
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.90G>C
  hgvsp: ENSP00000371263.2:p.Gln30His
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.111C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.90G>C
  hgvsp: ENSP00000371262.2:p.Gln30His
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.90G>C
  hgvsp: ENSP00000401952.1:p.Gln30His
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.90G>C
  hgvsp: ENSP00000428430.1:p.Gln30His
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.90G>C
  hgvsp: ENSP00000381133.2:p.Gln30His
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12402
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9820
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13150
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7761
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6538
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln30His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

8-17739667-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739667
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739667
    reference: chr 8
allele count: 1
allele frequency: 8.255047961828658e-6
allele num: 121138
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.85G>C
  hgvsp: ENSP00000401952.1:p.Glu29Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.85G>C
  hgvsp: ENSP00000428430.1:p.Glu29Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.116C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.85G>C
  hgvsp: ENSP00000371263.2:p.Glu29Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.8G>C
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.85G>C
  hgvsp: ENSP00000381131.1:p.Glu29Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.85G>C
  hgvsp: ENSP00000429757.1:p.Glu29Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.85G>C
  hgvsp: ENSP00000371262.2:p.Glu29Gln
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.85G>C
  hgvsp: ENSP00000381133.2:p.Glu29Gln
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu29Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

8-17739668-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739668
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739668
    reference: chr 8
allele count: 1
allele frequency: 8.255320554097116e-6
allele num: 121134
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.84G>A
  hgvsp: ENST00000381841.2:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.84G>A
  hgvsp: ENST00000398056.2:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.84G>A
  hgvsp: ENST00000427924.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.84G>A
  hgvsp: ENST00000522444.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.84G>A
  hgvsp: ENST00000398054.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.84G>A
  hgvsp: ENST00000381840.2:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.7G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.117C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.84G>A
  hgvsp: ENST00000518650.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7757
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9814
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6524
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5007
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2847
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln28Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

8-17739670-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739670
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739670
    reference: chr 8
allele count: 3
allele frequency: 2.477496077297878e-5
allele num: 121090
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.82C>G
  hgvsp: ENSP00000429757.1:p.Gln28Glu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.119G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.82C>G
  hgvsp: ENSP00000371262.2:p.Gln28Glu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.82C>G
  hgvsp: ENSP00000428430.1:p.Gln28Glu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.5C>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.82C>G
  hgvsp: ENSP00000401952.1:p.Gln28Glu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.82C>G
  hgvsp: ENSP00000381133.2:p.Gln28Glu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.82C>G
  hgvsp: ENSP00000371263.2:p.Gln28Glu
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.82C>G
  hgvsp: ENSP00000381131.1:p.Gln28Glu
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9811
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13129
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4628
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln28Glu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

8-17739670-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739670
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739670
    reference: chr 8
allele count: 4
allele frequency: 3.303328103063837e-5
allele num: 121090
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.119G>A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.82C>T
  hgvsp: ENSP00000428430.1:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.82C>T
  hgvsp: ENSP00000429757.1:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.82C>T
  hgvsp: ENSP00000381133.2:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.82C>T
  hgvsp: ENSP00000371262.2:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.5C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.82C>T
  hgvsp: ENSP00000401952.1:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.82C>T
  hgvsp: ENSP00000371263.2:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.82C>T
  hgvsp: ENSP00000381131.1:p.Gln28Ter
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9811
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13129
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12372
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2316
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18010
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gln28Ter
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

8-17739671-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739671
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739671
    reference: chr 8
allele count: 1
allele frequency: 8.259411599517651e-6
allele num: 121074
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.81C>G
  hgvsp: ENST00000381840.2:c.81C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.81C>G
  hgvsp: ENST00000522444.1:c.81C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.81C>G
  hgvsp: ENST00000398054.1:c.81C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.81C>G
  hgvsp: ENST00000518650.1:c.81C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.81C>G
  hgvsp: ENST00000381841.2:c.81C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.81C>G
  hgvsp: ENST00000427924.1:c.81C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.81C>G
  hgvsp: ENST00000398056.2:c.81C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.4C>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.120G>C
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12366
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9812
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16832
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala27Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum

8-17739672-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739672
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739672
    reference: chr 8
allele count: 1
allele frequency: 8.263643275047103e-6
allele num: 121012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.80C>T
  hgvsp: ENSP00000381131.1:p.Ala27Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.80C>T
  hgvsp: ENSP00000381133.2:p.Ala27Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.80C>T
  hgvsp: ENSP00000371263.2:p.Ala27Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.80C>T
  hgvsp: ENSP00000371262.2:p.Ala27Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.121G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.80C>T
  hgvsp: ENSP00000429757.1:p.Ala27Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.80C>T
  hgvsp: ENSP00000401952.1:p.Ala27Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.80C>T
  hgvsp: ENSP00000428430.1:p.Ala27Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.3C>T
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17922
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2316
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala27Val
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

8-17739672-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739672
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739672
    reference: chr 8
allele count: 7
allele frequency: 5.784550292532972e-5
allele num: 121012
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.80C>A
  hgvsp: ENSP00000429757.1:p.Ala27Asp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.80C>A
  hgvsp: ENSP00000401952.1:p.Ala27Asp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.80C>A
  hgvsp: ENSP00000428430.1:p.Ala27Asp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.80C>A
  hgvsp: ENSP00000381131.1:p.Ala27Asp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.80C>A
  hgvsp: ENSP00000371262.2:p.Ala27Asp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.3C>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.121G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.80C>A
  hgvsp: ENSP00000371263.2:p.Ala27Asp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.80C>A
  hgvsp: ENSP00000381133.2:p.Ala27Asp
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7756
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala27Asp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

8-17739674-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739674
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739674
    reference: chr 8
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.78T>A
  hgvsp: ENSP00000428430.1:p.Cys26Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.123A>T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.78T>A
  hgvsp: ENSP00000381131.1:p.Cys26Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.78T>A
  hgvsp: ENSP00000401952.1:p.Cys26Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.78T>A
  hgvsp: ENSP00000429757.1:p.Cys26Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.78T>A
  hgvsp: ENSP00000371262.2:p.Cys26Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.78T>A
  hgvsp: ENSP00000381133.2:p.Cys26Ter
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000104760
  ensembl transcript: ENST00000523097
  gene symbol: FGL1
  hgvsc: ENST00000523097.1:n.1T>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.78T>A
  hgvsp: ENSP00000371263.2:p.Cys26Ter
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4988
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4625
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys26Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/8-17739675-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739675
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739675
    reference: chr 8
allele count: 1
allele frequency: 8.27034090345204e-6
allele num: 120914
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.77G>T
  hgvsp: ENSP00000428430.1:p.Cys26Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.77G>T
  hgvsp: ENSP00000429757.1:p.Cys26Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.77G>T
  hgvsp: ENSP00000401952.1:p.Cys26Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.77G>T
  hgvsp: ENSP00000381131.1:p.Cys26Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.77G>T
  hgvsp: ENSP00000381133.2:p.Cys26Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.77G>T
  hgvsp: ENSP00000371263.2:p.Cys26Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.124C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.77G>T
  hgvsp: ENSP00000371262.2:p.Cys26Phe
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3969
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6431
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Cys26Phe
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP

8-17739675-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739675
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739675
    reference: chr 8
allele count: 1
allele frequency: 8.27034090345204e-6
allele num: 120914
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.77G>A
  hgvsp: ENSP00000428430.1:p.Cys26Tyr
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.77G>A
  hgvsp: ENSP00000429757.1:p.Cys26Tyr
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.77G>A
  hgvsp: ENSP00000371263.2:p.Cys26Tyr
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.124C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.77G>A
  hgvsp: ENSP00000401952.1:p.Cys26Tyr
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.77G>A
  hgvsp: ENSP00000381133.2:p.Cys26Tyr
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.77G>A
  hgvsp: ENSP00000371262.2:p.Cys26Tyr
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.77G>A
  hgvsp: ENSP00000381131.1:p.Cys26Tyr
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16809
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4624
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Cys26Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/8-17739676-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739676
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739676
    reference: chr 8
allele count: 5
allele frequency: 4.135991397137894e-5
allele num: 120890
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.76T>G
  hgvsp: ENSP00000381131.1:p.Cys26Gly
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.76T>G
  hgvsp: ENSP00000428430.1:p.Cys26Gly
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.125A>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.76T>G
  hgvsp: ENSP00000429757.1:p.Cys26Gly
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.76T>G
  hgvsp: ENSP00000371262.2:p.Cys26Gly
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.76T>G
  hgvsp: ENSP00000371263.2:p.Cys26Gly
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.76T>G
  hgvsp: ENSP00000381133.2:p.Cys26Gly
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.76T>G
  hgvsp: ENSP00000401952.1:p.Cys26Gly
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7754
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12213
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6425
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3968
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2818
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Cys26Gly
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

8-17739677-G-GTCCTCGAGCGCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739677
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739689
    reference: chr 8
allele count: 29
allele frequency: 2.400145664012712e-4
allele num: 120826
alternate allele: GTCCTCGAGCGCC
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9758
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12157
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12998
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3810
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7736
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17524
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3967
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu24_Asp25insGluAlaLeuGlu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/8-17739680-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739680
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739680
    reference: chr 8
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.72G>T
  hgvsp: ENSP00000381133.2:p.Glu24Asp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.72G>T
  hgvsp: ENSP00000381131.1:p.Glu24Asp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.72G>T
  hgvsp: ENSP00000401952.1:p.Glu24Asp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.129C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.72G>T
  hgvsp: ENSP00000371262.2:p.Glu24Asp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.72G>T
  hgvsp: ENSP00000429757.1:p.Glu24Asp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.72G>T
  hgvsp: ENSP00000428430.1:p.Glu24Asp
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.72G>T
  hgvsp: ENSP00000371263.2:p.Glu24Asp
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7717
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12967
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2794
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16814
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17429
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2313
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu24Asp
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

8-17739680-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739680
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739680
    reference: chr 8
allele count: 2
allele frequency: 1.656479318855704e-5
allele num: 120738
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.129C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.72G>A
  hgvsp: ENST00000518650.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.72G>A
  hgvsp: ENST00000522444.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.72G>A
  hgvsp: ENST00000427924.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.72G>A
  hgvsp: ENST00000381841.2:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.72G>A
  hgvsp: ENST00000398054.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.72G>A
  hgvsp: ENST00000398056.2:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.72G>A
  hgvsp: ENST00000381840.2:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7717
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4964
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2313
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu24Glu
num of homozygotes: 1
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

8-17739682-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739682
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739682
    reference: chr 8
allele count: 5
allele frequency: 4.142776654624996e-5
allele num: 120692
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.70G>A
  hgvsp: ENSP00000381131.1:p.Glu24Lys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.70G>A
  hgvsp: ENSP00000371262.2:p.Glu24Lys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.70G>A
  hgvsp: ENSP00000429757.1:p.Glu24Lys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.70G>A
  hgvsp: ENSP00000428430.1:p.Glu24Lys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.131C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.70G>A
  hgvsp: ENSP00000401952.1:p.Glu24Lys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.70G>A
  hgvsp: ENSP00000381133.2:p.Glu24Lys
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.70G>A
  hgvsp: ENSP00000371263.2:p.Glu24Lys
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12124
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3075
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6283
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu24Lys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS

8-17739683-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739683
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739683
    reference: chr 8
allele count: 1
allele frequency: 8.285827919925758e-6
allele num: 120688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.69C>T
  hgvsp: ENST00000427924.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.69C>T
  hgvsp: ENST00000398054.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.69C>T
  hgvsp: ENST00000398056.2:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.69C>T
  hgvsp: ENST00000381841.2:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.69C>T
  hgvsp: ENST00000381840.2:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.132G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.69C>T
  hgvsp: ENST00000522444.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.69C>T
  hgvsp: ENST00000518650.1:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3073
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12907
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9687
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2785
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16808
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu23Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

8-17739683-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739683
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739683
    reference: chr 8
allele count: 1
allele frequency: 8.285827919925758e-6
allele num: 120688
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.69C>G
  hgvsp: ENST00000381841.2:c.69C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.69C>G
  hgvsp: ENST00000398054.1:c.69C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.132G>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.69C>G
  hgvsp: ENST00000381840.2:c.69C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.69C>G
  hgvsp: ENST00000398056.2:c.69C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.69C>G
  hgvsp: ENST00000427924.1:c.69C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.69C>G
  hgvsp: ENST00000522444.1:c.69C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.69C>G
  hgvsp: ENST00000518650.1:c.69C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3073
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12907
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5109
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3962
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu23Leu
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

8-17739683-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739683
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739683
    reference: chr 8
allele count: 3
allele frequency: 2.485748375977728e-5
allele num: 120688
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.69C>A
  hgvsp: ENST00000381840.2:c.69C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.69C>A
  hgvsp: ENST00000398054.1:c.69C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.69C>A
  hgvsp: ENST00000518650.1:c.69C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.69C>A
  hgvsp: ENST00000398056.2:c.69C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.69C>A
  hgvsp: ENST00000427924.1:c.69C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.69C>A
  hgvsp: ENST00000381841.2:c.69C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.132G>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.69C>A
  hgvsp: ENST00000522444.1:c.69C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12907
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5109
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3073
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17417
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3962
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2785
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu23Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

8-17739685-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739685
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739685
    reference: chr 8
allele count: 1
allele frequency: 8.287888080359362e-6
allele num: 120658
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.67C>T
  hgvsp: ENSP00000371262.2:p.Leu23Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.67C>T
  hgvsp: ENSP00000401952.1:p.Leu23Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.67C>T
  hgvsp: ENSP00000371263.2:p.Leu23Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.134G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.67C>T
  hgvsp: ENSP00000381131.1:p.Leu23Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.67C>T
  hgvsp: ENSP00000429757.1:p.Leu23Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.67C>T
  hgvsp: ENSP00000428430.1:p.Leu23Phe
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.67C>T
  hgvsp: ENSP00000381133.2:p.Leu23Phe
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3073
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4953
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4613
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17417
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3962
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu23Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP

8-17739685-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739685
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739685
    reference: chr 8
allele count: 1
allele frequency: 8.287888080359362e-6
allele num: 120658
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.67C>A
  hgvsp: ENSP00000381133.2:p.Leu23Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.67C>A
  hgvsp: ENSP00000371263.2:p.Leu23Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.67C>A
  hgvsp: ENSP00000401952.1:p.Leu23Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.67C>A
  hgvsp: ENSP00000381131.1:p.Leu23Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.67C>A
  hgvsp: ENSP00000429757.1:p.Leu23Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.67C>A
  hgvsp: ENSP00000371262.2:p.Leu23Ile
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.134G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.67C>A
  hgvsp: ENSP00000428430.1:p.Leu23Ile
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5107
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3073
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6280
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4613
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16806
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu23Ile
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

8-17739686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739686
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739686
    reference: chr 8
allele count: 4
allele frequency: 3.315484972564362e-5
allele num: 120646
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.66G>A
  hgvsp: ENST00000398056.2:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.66G>A
  hgvsp: ENST00000427924.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.135C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.66G>A
  hgvsp: ENST00000381840.2:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.66G>A
  hgvsp: ENST00000518650.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.66G>A
  hgvsp: ENST00000381841.2:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.66G>A
  hgvsp: ENST00000398054.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.66G>A
  hgvsp: ENST00000522444.1:c.66G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12072
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3072
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5108
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2778
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6262
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3960
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4608
  bin: 8.25e1
  variant carriers: 0
hgvs: c.66G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP

8-17739687-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739687
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739687
    reference: chr 8
allele count: 5
allele frequency: 4.145112083830747e-5
allele num: 120624
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.65C>T
  hgvsp: ENSP00000371263.2:p.Ala22Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.65C>T
  hgvsp: ENSP00000428430.1:p.Ala22Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.65C>T
  hgvsp: ENSP00000381131.1:p.Ala22Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.65C>T
  hgvsp: ENSP00000429757.1:p.Ala22Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.65C>T
  hgvsp: ENSP00000371262.2:p.Ala22Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.136G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.65C>T
  hgvsp: ENSP00000401952.1:p.Ala22Val
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.65C>T
  hgvsp: ENSP00000381133.2:p.Ala22Val
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3071
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16793
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala22Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

8-17739689-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739689
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739689
    reference: chr 8
allele count: 2
allele frequency: 1.658677370664632e-5
allele num: 120578
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.64-1G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.64-1G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.64-1G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.138C>T
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.64-1G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.64-1G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.64-1G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.64-1G>A
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12018
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3072
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6246
  bin: 6.75e1
  variant carriers: 0
hgvs: c.64-1G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

8-17739691-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739691
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739691
    reference: chr 8
allele count: 1
allele frequency: 8.30357884248111e-6
allele num: 120430
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.64-3C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.64-3C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.64-3C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.64-3C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.140G>A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.64-3C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.64-3C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.64-3C>T
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2300
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17287
  bin: 6.25e1
  variant carriers: 0
hgvs: c.64-3C>T
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

8-17739691-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739691
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739691
    reference: chr 8
allele count: 276
allele frequency: 2.291787760524786e-3
allele num: 120430
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.64-3C>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.64-3C>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.64-3C>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.64-3C>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.64-3C>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.64-3C>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.140G>C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.64-3C>G
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9640
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 11932
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 5100
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 5.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 7665
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 6.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 12741
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 6.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6207
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3947
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
hgvs: c.64-3C>G
num of homozygotes: 4
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/8-17739692-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739692
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739692
    reference: chr 8
allele count: 423
allele frequency: 3.511480798924142e-3
allele num: 120462
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.64-4G>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.64-4G>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.141C>A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.64-4G>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.64-4G>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.64-4G>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.64-4G>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.64-4G>T
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11957
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 12737
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 9644
  bin: 3.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 7.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 7661
  bin: 4.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 5.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 5.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 6.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 5084
  bin: 4.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 6.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17286
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4888
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: c.64-4G>T
num of homozygotes: 3
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

8-17739701-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739701
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739701
    reference: chr 8
allele count: 9
allele frequency: 7.49063670411985e-5
allele num: 120150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.64-13A>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.148+2T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.64-13A>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.64-13A>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.64-13A>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.64-13A>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.64-13A>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.64-13A>T
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5083
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7670
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9650
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4597
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2688
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16452
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4864
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 3.25e1
  variant carriers: 0
hgvs: n.148+2T>A
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/8-17739710-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739710
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739710
    reference: chr 8
allele count: 1
allele frequency: 8.335139280177371e-6
allele num: 119974
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.64-22T>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.64-22T>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.64-22T>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.64-22T>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.64-22T>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.64-22T>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.64-22T>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.148+11A>C
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12430
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9627
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5080
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16444
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2654
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4586
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

8-17739712-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739712
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739712
    reference: chr 8
allele count: 1
allele frequency: 8.339309838717748e-6
allele num: 119914
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.64-24C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.64-24C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.64-24C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.64-24C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.64-24C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.64-24C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.64-24C>T
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.148+13G>A
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1997
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5860
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

8-17739716-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739716
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739716
    reference: chr 8
allele count: 2
allele frequency: 1.669978791269351e-5
allele num: 119762
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.64-28T>C
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.64-28T>C
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.64-28T>C
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.64-28T>C
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.64-28T>C
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.64-28T>C
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.148+17A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.64-28T>C
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10289
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3041
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14607
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3958
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4819
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2253
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

8-17739717-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739717
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739717
    reference: chr 8
allele count: 1
allele frequency: 8.353241893178742e-6
allele num: 119714
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.64-29A>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.64-29A>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.64-29A>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.148+18T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.64-29A>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.64-29A>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.64-29A>G
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.64-29A>G
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3040
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7652
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12075
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2282
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2627
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14347
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

8-17739719-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 17739719
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 17739719
    reference: chr 8
allele count: 3
allele frequency: 2.50890661849566e-5
allele num: 119574
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381131
  ensembl transcript: ENST00000398054
  gene symbol: FGL1
  hgvsc: ENST00000398054.1:c.64-31G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000401952
  ensembl transcript: ENST00000427924
  gene symbol: FGL1
  hgvsc: ENST00000427924.1:c.64-31G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000429757
  ensembl transcript: ENST00000522444
  gene symbol: FGL1
  hgvsc: ENST00000522444.1:c.64-31G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000381133
  ensembl transcript: ENST00000398056
  gene symbol: FGL1
  hgvsc: ENST00000398056.2:c.64-31G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371262
  ensembl transcript: ENST00000381840
  gene symbol: FGL1
  hgvsc: ENST00000381840.2:c.64-31G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000371263
  ensembl transcript: ENST00000381841
  gene symbol: FGL1
  hgvsc: ENST00000381841.2:c.64-31G>A
  variant of: http://identifiers.org/hgnc/3695
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253215
  ensembl transcript: ENST00000519368
  gene symbol: RP11-156K13.2
  hgvsc: ENST00000519368.1:n.148+20C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104760
  ensembl protein: ENSP00000428430
  ensembl transcript: ENST00000518650
  gene symbol: FGL1
  hgvsc: ENST00000518650.1:c.64-31G>A
  variant of: http://identifiers.org/hgnc/3695
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3040
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7646
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10014
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2999
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12003
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2338
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2298
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3956
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16428
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1345
bin: 6.75e1
variant carriers: 22

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 7.75e1
variant carriers: 24

GenotypeQuality
all individuals: 1006
bin: 8.25e1
variant carriers: 39

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 7

GenotypeQuality
all individuals: 4055
bin: 6.25e1
variant carriers: 16

GenotypeQuality
all individuals: 553
bin: 8.75e1
variant carriers: 25

GenotypeQuality
all individuals: 963
bin: 9.25e1
variant carriers: 58

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 9

GenotypeQuality
all individuals: 635
bin: 7.25e1
variant carriers: 16

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 14

Latino
type: Population
allele count: 3600
allele frequency: 3.110957483581058e-1
allele num: 11572
num of homozygotes: 639

European (Non-Finnish)
type: Population
allele count: 44660
allele frequency: 6.694648478488983e-1
allele num: 66710
num of homozygotes: 15044

European (Finnish)
type: Population
allele count: 4497
allele frequency: 6.803328290468986e-1
allele num: 6610
num of homozygotes: 1533

South Asian
type: Population
allele count: 7222
allele frequency: 4.374848558274776e-1
allele num: 16508
num of homozygotes: 1616

African
type: Population
allele count: 3148
allele frequency: 3.026923076923077e-1
allele num: 10400
num of homozygotes: 485

East Asian
type: Population
allele count: 3668
allele frequency: 4.24537037037037e-1
allele num: 8640
num of homozygotes: 807

Other
type: Population
allele count: 578
allele frequency: 6.379690949227373e-1
allele num: 906
num of homozygotes: 185

BaseQRankSum
type: SiteQuality
SIO_000300: 7.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

FS
type: SiteQuality
SIO_000300: 5.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.89e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.43e-1

DP
type: SiteQuality
SIO_000300: 5.514779e6

QD
type: SiteQuality
SIO_000300: 2.227e1

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2283
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17075
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3897
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6296
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4522
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18895
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4845
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.015e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

QD
type: SiteQuality
SIO_000300: 2.135e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.40055e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.015e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

GenotypeQuality
all individuals: 18893
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17103
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4847
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6300
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2282
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4518
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.777675063554426e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.05e-1

QD
type: SiteQuality
SIO_000300: 1.756e1

DP
type: SiteQuality
SIO_000300: 2.400451e6

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4516
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3897
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6301
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2775
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4841
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18886
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.913e1

DP
type: SiteQuality
SIO_000300: 2.399999e6

VQSLOD
type: SiteQuality
SIO_000300: -6.279999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.244e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.59e-1

FS
type: SiteQuality
SIO_000300: 3.441e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e-1

QD
type: SiteQuality
SIO_000300: 1.388e1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2774
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6301
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17124
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2283
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18886
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3898
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4516
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4841
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.92e-1

MQ
type: SiteQuality
SIO_000300: 5.926e1

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

FS
type: SiteQuality
SIO_000300: 7.85e-1

QD
type: SiteQuality
SIO_000300: 1.201e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.649999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.400032e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18876
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2283
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6298
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17160
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2771
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4838
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3897
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4512
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.943e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.52e-1

QD
type: SiteQuality
SIO_000300: 1.436e1

DP
type: SiteQuality
SIO_000300: 2.399905e6

FS
type: SiteQuality
SIO_000300: 3.341e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.596e0

MQRankSum
type: SiteQuality
SIO_000300: 4.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.82e-1

BaseQRankSum
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SIO_000300: -2.059e0

InbreedingCoeff
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MQ
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SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 2.399749e6

VQSLOD
type: SiteQuality
SIO_000300: 3.49e-1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.21e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.645e0

FS
type: SiteQuality
SIO_000300: 7.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

QD
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VQSLOD
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SIO_000300: -1.592e-1

MQ
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SIO_000300: 5.976e1

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

DP
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SIO_000300: 2.399478e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2770
bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.92e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

MQRankSum
type: SiteQuality
SIO_000300: -7.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

DP
type: SiteQuality
SIO_000300: 2.399386e6

VQSLOD
type: SiteQuality
SIO_000300: 2.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.413e0

QD
type: SiteQuality
SIO_000300: 1.167e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.404e0

DP
type: SiteQuality
SIO_000300: 2.399222e6

MQ
type: SiteQuality
SIO_000300: 5.983e1

QD
type: SiteQuality
SIO_000300: 1.32e1

MQRankSum
type: SiteQuality
SIO_000300: -1.17e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.0e-1

FS
type: SiteQuality
SIO_000300: 7.441e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 26
allele frequency: 2.500480861704174e-3
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.943e1

BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-2

QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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Other
type: Population
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allele frequency: 0.0e0
allele num: 904
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.746e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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QD
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FS
type: SiteQuality
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MQRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

Other
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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FS
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VQSLOD
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QD
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.89e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
type: Population
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Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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QD
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DP
type: SiteQuality
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ClippingRankSum
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MQ
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FS
type: SiteQuality
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VQSLOD
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SIO_000300: 1.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.19e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997601918465228e-5
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

DP
type: SiteQuality
SIO_000300: 2.397589e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.1e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

QD
type: SiteQuality
SIO_000300: 1.336e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.303e1

MQRankSum
type: SiteQuality
SIO_000300: 2.83e-1

FS
type: SiteQuality
SIO_000300: 3.197e0

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.14e-1

DP
type: SiteQuality
SIO_000300: 2.397586e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.992805755395684e-5
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

MQRankSum
type: SiteQuality
SIO_000300: 2.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

DP
type: SiteQuality
SIO_000300: 2.397586e6

FS
type: SiteQuality
SIO_000300: 3.197e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.14e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.303e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 121

GenotypeQuality
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GenotypeQuality
all individuals: 4820
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728309713100588e-4
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 116
allele frequency: 1.116028477968059e-2
allele num: 10394
num of homozygotes: 1

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.497211728728189e-5
allele num: 66708
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.298e1

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

FS
type: SiteQuality
SIO_000300: 2.469e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.51e-1

DP
type: SiteQuality
SIO_000300: 2.400197e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 29

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 6288
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variant carriers: 0

African
type: Population
allele count: 23
allele frequency: 2.213240954580446e-3
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.320774282751469e-4
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 2.393722e6

QD
type: SiteQuality
SIO_000300: 1.254e1

VQSLOD
type: SiteQuality
SIO_000300: 2.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e-1

FS
type: SiteQuality
SIO_000300: 2.469e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92492781520693e-4
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.86e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.19e-1

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 1.475e0

VQSLOD
type: SiteQuality
SIO_000300: 2.66e0

QD
type: SiteQuality
SIO_000300: 1.253e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.81e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 70
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 17171
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.391469e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.149999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.741e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.02e-1

QD
type: SiteQuality
SIO_000300: 1.527e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 16
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6281
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

FS
type: SiteQuality
SIO_000300: 1.761e0

BaseQRankSum
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SIO_000300: -2.353e0

MQRankSum
type: SiteQuality
SIO_000300: -1.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.8e-1

DP
type: SiteQuality
SIO_000300: 2.391419e6

MQ
type: SiteQuality
SIO_000300: 5.982e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

QD
type: SiteQuality
SIO_000300: 1.111e1

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 19444
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variant carriers: 3224

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
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GenotypeQuality
all individuals: 16916
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4754
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2699
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4417
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3808
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6180
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 27
allele frequency: 2.986725663716814e-2
allele num: 904
num of homozygotes: 1

Latino
type: Population
allele count: 170
allele frequency: 1.469317199654278e-2
allele num: 11570
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 2026
allele frequency: 3.038574599556062e-2
allele num: 66676
num of homozygotes: 42

East Asian
type: Population
allele count: 7
allele frequency: 8.092485549132948e-4
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 224
allele frequency: 3.38777979431337e-2
allele num: 6612
num of homozygotes: 4

African
type: Population
allele count: 64
allele frequency: 6.159769008662175e-3
allele num: 10390
num of homozygotes: 1

South Asian
type: Population
allele count: 786
allele frequency: 4.760751059963658e-2
allele num: 16510
num of homozygotes: 26

FS
type: SiteQuality
SIO_000300: 5.24e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.356e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

DP
type: SiteQuality
SIO_000300: 2.471174e6

VQSLOD
type: SiteQuality
SIO_000300: 4.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.02e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16916
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2233
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 4417
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
all individuals: 4754
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 84
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variant carriers: 0

GenotypeQuality
all individuals: 2699
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variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19444
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6180
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499790029395885e-5
allele num: 66676
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92492781520693e-4
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.84e0

FS
type: SiteQuality
SIO_000300: 5.24e-1

QD
type: SiteQuality
SIO_000300: 1.356e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.02e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

DP
type: SiteQuality
SIO_000300: 2.471174e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.27e-1

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5022
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variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16910
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.56e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

FS
type: SiteQuality
SIO_000300: 8.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.595e0

QD
type: SiteQuality
SIO_000300: 1.466e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

VQSLOD
type: SiteQuality
SIO_000300: 7.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

DP
type: SiteQuality
SIO_000300: 2.284602e6

GenotypeQuality
all individuals: 98
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 2330
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6564
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variant carriers: 0

GenotypeQuality
all individuals: 16911
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18106
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4645
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5020
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499700059988002e-5
allele num: 66680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-2

MQ
type: SiteQuality
SIO_000300: 6.043e1

DP
type: SiteQuality
SIO_000300: 2.284213e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

FS
type: SiteQuality
SIO_000300: 1.102e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 6.24e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5020
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3982
bin: 9.25e1
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GenotypeQuality
all individuals: 18106
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variant carriers: 0

GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4645
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variant carriers: 0

GenotypeQuality
all individuals: 16911
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
all individuals: 2330
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6564
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499100179964007e-5
allele num: 66680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.12e-1

FS
type: SiteQuality
SIO_000300: 1.102e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

QD
type: SiteQuality
SIO_000300: 6.24e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 2.284213e6

MQ
type: SiteQuality
SIO_000300: 6.043e1

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18111
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5020
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variant carriers: 0

GenotypeQuality
all individuals: 3982
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
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variant carriers: 0

GenotypeQuality
all individuals: 2329
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 16908
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4646
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variant carriers: 0

GenotypeQuality
all individuals: 34
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GenotypeQuality
all individuals: 2875
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variant carriers: 0

GenotypeQuality
all individuals: 6569
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.932e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.516e0

QD
type: SiteQuality
SIO_000300: 1.149e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.93e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.33e-1

FS
type: SiteQuality
SIO_000300: 3.73e0

DP
type: SiteQuality
SIO_000300: 2.283772e6

MQRankSum
type: SiteQuality
SIO_000300: 9.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-1

GenotypeQuality
all individuals: 6569
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2329
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16907
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2873
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 4646
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3982
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.195e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.53e-1

DP
type: SiteQuality
SIO_000300: 2.283646e6

VQSLOD
type: SiteQuality
SIO_000300: -2.135e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.73e-1

QD
type: SiteQuality
SIO_000300: 2.336e1

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18089
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variant carriers: 0

GenotypeQuality
all individuals: 2872
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.281e1

FS
type: SiteQuality
SIO_000300: 3.307e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

MQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.76e-1

DP
type: SiteQuality
SIO_000300: 2.283475e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.056e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3982
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 16906
bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.05e-1

MQ
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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SIO_000300: -2.313e0

ClippingRankSum
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SIO_000300: 3.9e-2

DP
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 9.95e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
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South Asian
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allele frequency: 0.0e0
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East Asian
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 5.41e-1

ClippingRankSum
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SIO_000300: -2.51e-1

VQSLOD
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QD
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BaseQRankSum
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SIO_000300: -3.62e-1

MQ
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.27e-1

DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele frequency: 1.926040061633282e-4
allele num: 10384
num of homozygotes: 0

Latino
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allele frequency: 4.322268326417704e-4
allele num: 11568
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 45
allele frequency: 6.751687921980495e-4
allele num: 66650
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.62e-1

FS
type: SiteQuality
SIO_000300: 5.41e-1

DP
type: SiteQuality
SIO_000300: 2.28392e6

ReadPosRankSum
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SIO_000300: 4.27e-1

MQRankSum
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MQ
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QD
type: SiteQuality
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ClippingRankSum
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SIO_000300: -2.51e-1

VQSLOD
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InbreedingCoeff
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SIO_000300: -4.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

DP
type: SiteQuality
SIO_000300: 2.279955e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.234e0

BaseQRankSum
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SIO_000300: -3.928e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.189e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.801801801801802e-4
allele num: 66600
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.197e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.41e-1

DP
type: SiteQuality
SIO_000300: 2.279938e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.21e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

FS
type: SiteQuality
SIO_000300: 5.570000000000001e-1

BaseQRankSum
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SIO_000300: -1.623e0

VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 19
allele frequency: 2.197547999074717e-3
allele num: 8646
num of homozygotes: 0

South Asian
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Latino
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African
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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ClippingRankSum
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QD
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DP
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BaseQRankSum
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FS
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MQRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.00318337437684e-5
allele num: 66596
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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Other
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InbreedingCoeff
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FS
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MQ
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QD
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MQRankSum
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DP
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 21

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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African
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Other
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South Asian
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allele frequency: 1.212415130940834e-3
allele num: 16496
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East Asian
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allele num: 8644
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Latino
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allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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ClippingRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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allele frequency: 1.50253929140247e-5
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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BaseQRankSum
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MQRankSum
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DP
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FS
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MQ
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.50253929140247e-5
allele num: 66554
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
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South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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BaseQRankSum
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QD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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DP
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MQ
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FS
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

African
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66516
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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num of homozygotes: 0

QD
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MQ
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 6.013590715015936e-5
allele num: 66516
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
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SIO_000300: 5.972e1

QD
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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MQRankSum
type: SiteQuality
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DP
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
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Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66520
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South Asian
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African
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allele frequency: 9.663703131039814e-5
allele num: 10348
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Latino
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allele count: 0
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ClippingRankSum
type: SiteQuality
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QD
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MQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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InbreedingCoeff
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FS
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MQ
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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European (Non-Finnish)
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East Asian
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African
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Other
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InbreedingCoeff
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MQRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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DP
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VQSLOD
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MQ
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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African
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Other
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FS
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QD
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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MQ
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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South Asian
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European (Finnish)
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Other
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FS
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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DP
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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South Asian
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Other
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505751972535084e-5
allele num: 66412
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.256e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.103e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.6e-2

FS
type: SiteQuality
SIO_000300: 6.087e0

DP
type: SiteQuality
SIO_000300: 2.268788e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.103e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -7.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.087e0

VQSLOD
type: SiteQuality
SIO_000300: 6.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.65e-1

DP
type: SiteQuality
SIO_000300: 2.268788e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66400
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
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allele count: 5
allele frequency: 4.844961240310077e-4
allele num: 10320
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.412e0

MQRankSum
type: SiteQuality
SIO_000300: -1.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.46e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.382e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.79e-1

DP
type: SiteQuality
SIO_000300: 2.268187e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 29

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 4.219663632527579e-4
allele num: 66356
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

QD
type: SiteQuality
SIO_000300: 4.3e0

DP
type: SiteQuality
SIO_000300: 2.263717e6

MQRankSum
type: SiteQuality
SIO_000300: -4.646e0

FS
type: SiteQuality
SIO_000300: 5.606e0

MQ
type: SiteQuality
SIO_000300: 5.22e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.3e-2

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508523155830442e-5
allele num: 66290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.07e-2

FS
type: SiteQuality
SIO_000300: 2.784e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

VQSLOD
type: SiteQuality
SIO_000300: -1.653e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 2.259971e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.66e0

QD
type: SiteQuality
SIO_000300: 1.775e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66290
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.215509906405737e-4
allele num: 16454
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 1
allele frequency: 6.080505898090721e-5
allele num: 16446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.018685664261781e-5
allele num: 66254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.944390433599067e-4
allele num: 10286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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FS
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.080505898090721e-5
allele num: 16446
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
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num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.080505898090721e-5
allele num: 16446
num of homozygotes: 0

East Asian
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allele count: 0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
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allele num: 66260
num of homozygotes: 0

Latino
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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DP
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MQRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 3.408e0

ClippingRankSum
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BaseQRankSum
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VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.252e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.527618472683369e-5
allele num: 66260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

DP
type: SiteQuality
SIO_000300: 2.256477e6

FS
type: SiteQuality
SIO_000300: 3.408e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.68e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.305e0

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

QD
type: SiteQuality
SIO_000300: 1.252e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.73e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6280
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.822e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.126e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

QD
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SIO_000300: 1.222e1

VQSLOD
type: SiteQuality
SIO_000300: 5.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.92e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.255146e6

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.731413001167769e-5
allele num: 10276
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66242
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.822e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.255146e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.126e0

QD
type: SiteQuality
SIO_000300: 1.222e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.038829674809022e-5
allele num: 66238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.51e-1

FS
type: SiteQuality
SIO_000300: 2.212e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.92e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.7e-1

QD
type: SiteQuality
SIO_000300: 1.249e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.254489e6

GenotypeQuality
all individuals: 2772
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.628558204119417e-4
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.738994935722633e-5
allele num: 10268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66226
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.108e0

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-1

FS
type: SiteQuality
SIO_000300: 2.495e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.45e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

DP
type: SiteQuality
SIO_000300: 2.253178e6

QD
type: SiteQuality
SIO_000300: 1.25e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.85e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.021056765656627e-5
allele num: 66202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.17e-1

DP
type: SiteQuality
SIO_000300: 2.251204e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.22e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.171e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e-1

FS
type: SiteQuality
SIO_000300: 3.409e0

VQSLOD
type: SiteQuality
SIO_000300: 2.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51290508033526e-5
allele num: 66098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.531e1

FS
type: SiteQuality
SIO_000300: 7.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.253263e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.83e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 272

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 226
allele frequency: 2.20703125e-2
allele num: 10240
num of homozygotes: 4

East Asian
type: Population
allele count: 4
allele frequency: 4.628558204119417e-4
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.474272930648769e-3
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.298926220990648e-3
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 3.328391176737572e-4
allele num: 66098
num of homozygotes: 0

South Asian
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allele count: 5
allele frequency: 3.048780487804878e-4
allele num: 16400
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.253263e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.2e-1

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.531e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 419

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

Latino
type: Population
allele count: 18
allele frequency: 1.558711465188777e-3
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.474272930648769e-3
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.174123337363966e-4
allele num: 66160
num of homozygotes: 0

African
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allele count: 380
allele frequency: 3.716017993350284e-2
allele num: 10226
num of homozygotes: 3

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

FS
type: SiteQuality
SIO_000300: 7.9e-1

VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.64e-2

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.02e-1

DP
type: SiteQuality
SIO_000300: 2.249559e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.36e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.424e1

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 16577
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GenotypeQuality
all individuals: 1498
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.363636363636364e-4
allele num: 66000
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.219774e6

FS
type: SiteQuality
SIO_000300: 3.285e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-1

QD
type: SiteQuality
SIO_000300: 1.332e1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.85e-1

GenotypeQuality
all individuals: 5898
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1938
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4840
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3961
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2307
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15771
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65920
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16246
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.06e0

QD
type: SiteQuality
SIO_000300: 8.289999999999999e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.534e0

DP
type: SiteQuality
SIO_000300: 2.203566e6

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4832
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16438
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15684
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2305
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3959
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4585
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.159152500615915e-5
allele num: 16236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.939e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 2.200869e6

FS
type: SiteQuality
SIO_000300: 4.431e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.296e0

QD
type: SiteQuality
SIO_000300: 1.449e1

VQSLOD
type: SiteQuality
SIO_000300: -1.272e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.835e0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1129
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2631
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16435
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 646
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5740
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2299
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4577
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.902951079421667e-5
allele num: 10098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.16827041697508e-5
allele num: 16212
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.24e-1

DP
type: SiteQuality
SIO_000300: 2.185784e6

VQSLOD
type: SiteQuality
SIO_000300: -3.136e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.38e1

GenotypeQuality
all individuals: 178
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2300
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4575
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1189
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5713
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3958
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16434
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 222
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4818
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10086
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16210
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.912e0

DP
type: SiteQuality
SIO_000300: 2.182192e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

QD
type: SiteQuality
SIO_000300: 1.539e1

FS
type: SiteQuality
SIO_000300: 6.054e0

VQSLOD
type: SiteQuality
SIO_000300: 2.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2603
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5652
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14123
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4781
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4563
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.977963073257892e-4
allele num: 10074
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0