5-58270521-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270521
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270521
    reference: chr 5
allele count: 3
allele frequency: 2.591658315767649e-5
allele num: 115756
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2208T>C
  hgvsp: ENST00000507116.1:c.2208T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2217T>C
  hgvsp: ENST00000546160.1:c.2217T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2136T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1527T>C
  hgvsp: ENST00000317118.8:c.1527T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2217T>C
  hgvsp: ENST00000502484.2:c.2217T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1494T>C
  hgvsp: ENST00000358923.6:c.1494T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.2034T>C
  hgvsp: ENST00000405755.2:c.2034T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1992T>C
  hgvsp: ENST00000360047.5:c.1992T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.2010T>C
  hgvsp: ENST00000503258.1:c.2010T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2400T>C
  hgvsp: ENST00000340635.6:c.2400T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys800Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/5-58270522-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270522
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270522
    reference: chr 5
allele count: 2
allele frequency: 1.727145546555208e-5
allele num: 115798
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2207G>T
  hgvsp: ENSP00000424852.1:p.Cys736Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2135G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1991G>T
  hgvsp: ENSP00000353152.5:p.Cys664Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2216G>T
  hgvsp: ENSP00000442734.1:p.Cys739Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.2009G>T
  hgvsp: ENSP00000425605.1:p.Cys670Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2216G>T
  hgvsp: ENSP00000423094.2:p.Cys739Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2399G>T
  hgvsp: ENSP00000345502.6:p.Cys800Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1526G>T
  hgvsp: ENSP00000321739.8:p.Cys509Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1493G>T
  hgvsp: ENSP00000351800.6:p.Cys498Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.2033G>T
  hgvsp: ENSP00000384806.2:p.Cys678Phe
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14798
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys800Phe
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

5-58270525-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270525
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270525
    reference: chr 5
allele count: 1
allele frequency: 8.607037113544033e-6
allele num: 116184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2132C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1490C>T
  hgvsp: ENSP00000351800.6:p.Ala497Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.2006C>T
  hgvsp: ENSP00000425605.1:p.Ala669Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1523C>T
  hgvsp: ENSP00000321739.8:p.Ala508Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1988C>T
  hgvsp: ENSP00000353152.5:p.Ala663Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.2030C>T
  hgvsp: ENSP00000384806.2:p.Ala677Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2213C>T
  hgvsp: ENSP00000423094.2:p.Ala738Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2213C>T
  hgvsp: ENSP00000442734.1:p.Ala738Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2396C>T
  hgvsp: ENSP00000345502.6:p.Ala799Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2204C>T
  hgvsp: ENSP00000424852.1:p.Ala735Val
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala799Val
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

5-58270525-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270525
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270525
    reference: chr 5
allele count: 49
allele frequency: 4.217448185636577e-4
allele num: 116184
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.2030C>G
  hgvsp: ENSP00000384806.2:p.Ala677Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2213C>G
  hgvsp: ENSP00000442734.1:p.Ala738Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1523C>G
  hgvsp: ENSP00000321739.8:p.Ala508Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.2006C>G
  hgvsp: ENSP00000425605.1:p.Ala669Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2396C>G
  hgvsp: ENSP00000345502.6:p.Ala799Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2204C>G
  hgvsp: ENSP00000424852.1:p.Ala735Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1988C>G
  hgvsp: ENSP00000353152.5:p.Ala663Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1490C>G
  hgvsp: ENSP00000351800.6:p.Ala497Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2213C>G
  hgvsp: ENSP00000423094.2:p.Ala738Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2132C>G
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8818
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14953
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28817
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala799Gly
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-58270533-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270533
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270533
    reference: chr 5
allele count: 1
allele frequency: 8.530530769624486e-6
allele num: 117226
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2205G>T
  hgvsp: ENSP00000442734.1:p.Gln735His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2388G>T
  hgvsp: ENSP00000345502.6:p.Gln796His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1515G>T
  hgvsp: ENSP00000321739.8:p.Gln505His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1998G>T
  hgvsp: ENSP00000425605.1:p.Gln666His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1980G>T
  hgvsp: ENSP00000353152.5:p.Gln660His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2196G>T
  hgvsp: ENSP00000424852.1:p.Gln732His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2205G>T
  hgvsp: ENSP00000423094.2:p.Gln735His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2124G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.2022G>T
  hgvsp: ENSP00000384806.2:p.Gln674His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1482G>T
  hgvsp: ENSP00000351800.6:p.Gln494His
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln796His
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

5-58270552-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270552
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270552
    reference: chr 5
allele count: 1
allele frequency: 8.38841727342885e-6
allele num: 119212
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2369G>A
  hgvsp: ENSP00000345502.6:p.Gly790Glu
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2177G>A
  hgvsp: ENSP00000424852.1:p.Gly726Glu
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2186G>A
  hgvsp: ENSP00000423094.2:p.Gly729Glu
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1496G>A
  hgvsp: ENSP00000321739.8:p.Gly499Glu
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1979G>A
  hgvsp: ENSP00000425605.1:p.Gly660Glu
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.2003G>A
  hgvsp: ENSP00000384806.2:p.Gly668Glu
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2186G>A
  hgvsp: ENSP00000442734.1:p.Gly729Glu
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1961G>A
  hgvsp: ENSP00000353152.5:p.Gly654Glu
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1463G>A
  hgvsp: ENSP00000351800.6:p.Gly488Glu
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2105G>A
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly790Glu
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

5-58270558-GCCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270558
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270555
    reference: chr 5
allele count: 1
allele frequency: 8.355754608198667e-6
allele num: 119678
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2177_2179delAGG
  hgvsp: ENSP00000423094.2:p.Glu726del
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2360_2362delAGG
  hgvsp: ENSP00000345502.6:p.Glu787del
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2177_2179delAGG
  hgvsp: ENSP00000442734.1:p.Glu726del
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1994_1996delAGG
  hgvsp: ENSP00000384806.2:p.Glu665del
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1487_1489delAGG
  hgvsp: ENSP00000321739.8:p.Glu496del
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1970_1972delAGG
  hgvsp: ENSP00000425605.1:p.Glu657del
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1952_1954delAGG
  hgvsp: ENSP00000353152.5:p.Glu651del
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2168_2170delAGG
  hgvsp: ENSP00000424852.1:p.Glu723del
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1454_1456delAGG
  hgvsp: ENSP00000351800.6:p.Glu485del
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2096_2098delAGG
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29747
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2171
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Glu787del
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: GCCT
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD

5-58270572-C-CTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270572
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270575
    reference: chr 5
allele count: 1
allele frequency: 8.312137383006666e-6
allele num: 120306
alternate allele: CTGT
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1440_1442dupACA
  hgvsp: ENSP00000351800.6:p.Gln481dup
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2154_2156dupACA
  hgvsp: ENSP00000424852.1:p.Gln719dup
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2163_2165dupACA
  hgvsp: ENSP00000442734.1:p.Gln722dup
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1473_1475dupACA
  hgvsp: ENSP00000321739.8:p.Gln492dup
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2346_2348dupACA
  hgvsp: ENSP00000345502.6:p.Gln783dup
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1980_1982dupACA
  hgvsp: ENSP00000384806.2:p.Gln661dup
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1956_1958dupACA
  hgvsp: ENSP00000425605.1:p.Gln653dup
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2163_2165dupACA
  hgvsp: ENSP00000423094.2:p.Gln722dup
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1938_1940dupACA
  hgvsp: ENSP00000353152.5:p.Gln647dup
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2082_2084dupACA
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8947
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2005
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln783dup
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: C
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-58270577-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270577
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270577
    reference: chr 5
allele count: 1
allele frequency: 8.306475728477921e-6
allele num: 120388
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2344G>T
  hgvsp: ENSP00000345502.6:p.Glu782Ter
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2161G>T
  hgvsp: ENSP00000442734.1:p.Glu721Ter
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1978G>T
  hgvsp: ENSP00000384806.2:p.Glu660Ter
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2080G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2161G>T
  hgvsp: ENSP00000423094.2:p.Glu721Ter
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1438G>T
  hgvsp: ENSP00000351800.6:p.Glu480Ter
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1936G>T
  hgvsp: ENSP00000353152.5:p.Glu646Ter
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1954G>T
  hgvsp: ENSP00000425605.1:p.Glu652Ter
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1471G>T
  hgvsp: ENSP00000321739.8:p.Glu491Ter
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2152G>T
  hgvsp: ENSP00000424852.1:p.Glu718Ter
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8947
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu782Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ

5-58270583-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270583
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270583
    reference: chr 5
allele count: 4
allele frequency: 3.319557171073379e-5
allele num: 120498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2074C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2155C>T
  hgvsp: ENSP00000423094.2:p.Leu719Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1432C>T
  hgvsp: ENSP00000351800.6:p.Leu478Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1465C>T
  hgvsp: ENSP00000321739.8:p.Leu489Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1948C>T
  hgvsp: ENSP00000425605.1:p.Leu650Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2338C>T
  hgvsp: ENSP00000345502.6:p.Leu780Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2146C>T
  hgvsp: ENSP00000424852.1:p.Leu716Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2155C>T
  hgvsp: ENSP00000442734.1:p.Leu719Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1972C>T
  hgvsp: ENSP00000384806.2:p.Leu658Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1930C>T
  hgvsp: ENSP00000353152.5:p.Leu644Phe
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30076
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu780Phe
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

5-58270605-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270605
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270605
    reference: chr 5
allele count: 1
allele frequency: 8.292836647703714e-6
allele num: 120586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2133C>T
  hgvsp: ENST00000546160.1:c.2133C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2052C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1926C>T
  hgvsp: ENST00000503258.1:c.1926C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1410C>T
  hgvsp: ENST00000358923.6:c.1410C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2316C>T
  hgvsp: ENST00000340635.6:c.2316C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1950C>T
  hgvsp: ENST00000405755.2:c.1950C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1443C>T
  hgvsp: ENST00000317118.8:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2133C>T
  hgvsp: ENST00000502484.2:c.2133C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1908C>T
  hgvsp: ENST00000360047.5:c.1908C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2124C>T
  hgvsp: ENST00000507116.1:c.2124C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16858
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8035
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp772Asp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

5-58270615-C-CAAAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270615
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270619
    reference: chr 5
allele count: 1
allele frequency: 8.29242404139578e-6
allele num: 120592
alternate allele: CAAAG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2110_2113dupCTTT
  hgvsp: ENSP00000424852.1:p.Cys705SerfsTer10
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1936_1939dupCTTT
  hgvsp: ENSP00000384806.2:p.Cys647SerfsTer10
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2119_2122dupCTTT
  hgvsp: ENSP00000442734.1:p.Cys708SerfsTer10
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1396_1399dupCTTT
  hgvsp: ENSP00000351800.6:p.Cys467SerfsTer10
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2302_2305dupCTTT
  hgvsp: ENSP00000345502.6:p.Cys769SerfsTer10
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1429_1432dupCTTT
  hgvsp: ENSP00000321739.8:p.Cys478SerfsTer10
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2038_2041dupCTTT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1912_1915dupCTTT
  hgvsp: ENSP00000425605.1:p.Cys639SerfsTer10
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2119_2122dupCTTT
  hgvsp: ENSP00000423094.2:p.Cys708SerfsTer10
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1894_1897dupCTTT
  hgvsp: ENSP00000353152.5:p.Cys633SerfsTer10
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30147
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Cys769SerfsTer10
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

5-58270626-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270626
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270626
    reference: chr 5
allele count: 1
allele frequency: 8.293111741387604e-6
allele num: 120582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1929C>T
  hgvsp: ENST00000405755.2:c.1929C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2103C>T
  hgvsp: ENST00000507116.1:c.2103C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1389C>T
  hgvsp: ENST00000358923.6:c.1389C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2031C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2112C>T
  hgvsp: ENST00000546160.1:c.2112C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2295C>T
  hgvsp: ENST00000340635.6:c.2295C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1887C>T
  hgvsp: ENST00000360047.5:c.1887C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1905C>T
  hgvsp: ENST00000503258.1:c.1905C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2112C>T
  hgvsp: ENST00000502484.2:c.2112C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1422C>T
  hgvsp: ENST00000317118.8:c.1422C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8957
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser765Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

5-58270630-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270630
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270630
    reference: chr 5
allele count: 1
allele frequency: 8.29324929507381e-6
allele num: 120580
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1883A>G
  hgvsp: ENSP00000353152.5:p.Asp628Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1925A>G
  hgvsp: ENSP00000384806.2:p.Asp642Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2291A>G
  hgvsp: ENSP00000345502.6:p.Asp764Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1418A>G
  hgvsp: ENSP00000321739.8:p.Asp473Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2108A>G
  hgvsp: ENSP00000442734.1:p.Asp703Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1385A>G
  hgvsp: ENSP00000351800.6:p.Asp462Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1901A>G
  hgvsp: ENSP00000425605.1:p.Asp634Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2027A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2108A>G
  hgvsp: ENSP00000423094.2:p.Asp703Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2099A>G
  hgvsp: ENSP00000424852.1:p.Asp700Gly
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp764Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

5-58270642-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270642
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270642
    reference: chr 5
allele count: 1
allele frequency: 8.294074713025015e-6
allele num: 120568
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2096C>G
  hgvsp: ENSP00000423094.2:p.Thr699Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1889C>G
  hgvsp: ENSP00000425605.1:p.Thr630Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2015C>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1373C>G
  hgvsp: ENSP00000351800.6:p.Thr458Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2096C>G
  hgvsp: ENSP00000442734.1:p.Thr699Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1871C>G
  hgvsp: ENSP00000353152.5:p.Thr624Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2279C>G
  hgvsp: ENSP00000345502.6:p.Thr760Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1913C>G
  hgvsp: ENSP00000384806.2:p.Thr638Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1406C>G
  hgvsp: ENSP00000321739.8:p.Thr469Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2087C>G
  hgvsp: ENSP00000424852.1:p.Thr696Ser
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16673
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr760Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

5-58270654-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270654
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270654
    reference: chr 5
allele count: 3
allele frequency: 2.489089491064169e-5
allele num: 120526
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1901T>C
  hgvsp: ENSP00000384806.2:p.Val634Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2084T>C
  hgvsp: ENSP00000442734.1:p.Val695Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1361T>C
  hgvsp: ENSP00000351800.6:p.Val454Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2267T>C
  hgvsp: ENSP00000345502.6:p.Val756Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2084T>C
  hgvsp: ENSP00000423094.2:p.Val695Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1394T>C
  hgvsp: ENSP00000321739.8:p.Val465Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2003T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2075T>C
  hgvsp: ENSP00000424852.1:p.Val692Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1859T>C
  hgvsp: ENSP00000353152.5:p.Val620Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1877T>C
  hgvsp: ENSP00000425605.1:p.Val626Ala
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30166
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val756Ala
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

5-58270655-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270655
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270655
    reference: chr 5
allele count: 1
allele frequency: 8.297102651754007e-6
allele num: 120524
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.2002G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1393G>A
  hgvsp: ENSP00000321739.8:p.Val465Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1876G>A
  hgvsp: ENSP00000425605.1:p.Val626Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2074G>A
  hgvsp: ENSP00000424852.1:p.Val692Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2266G>A
  hgvsp: ENSP00000345502.6:p.Val756Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1900G>A
  hgvsp: ENSP00000384806.2:p.Val634Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2083G>A
  hgvsp: ENSP00000423094.2:p.Val695Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2083G>A
  hgvsp: ENSP00000442734.1:p.Val695Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1858G>A
  hgvsp: ENSP00000353152.5:p.Val620Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1360G>A
  hgvsp: ENSP00000351800.6:p.Val454Met
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val756Met
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/5-58270663-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270663
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270663
    reference: chr 5
allele count: 3
allele frequency: 2.489750526997195e-5
allele num: 120494
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1994G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1850G>T
  hgvsp: ENSP00000353152.5:p.Gly617Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1868G>T
  hgvsp: ENSP00000425605.1:p.Gly623Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2258G>T
  hgvsp: ENSP00000345502.6:p.Gly753Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2075G>T
  hgvsp: ENSP00000442734.1:p.Gly692Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1352G>T
  hgvsp: ENSP00000351800.6:p.Gly451Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1892G>T
  hgvsp: ENSP00000384806.2:p.Gly631Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2066G>T
  hgvsp: ENSP00000424852.1:p.Gly689Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2075G>T
  hgvsp: ENSP00000423094.2:p.Gly692Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1385G>T
  hgvsp: ENSP00000321739.8:p.Gly462Val
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly753Val
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

5-58270664-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270664
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270664
    reference: chr 5
allele count: 3
allele frequency: 2.490163852781513e-5
allele num: 120474
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1384G>A
  hgvsp: ENSP00000321739.8:p.Gly462Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1891G>A
  hgvsp: ENSP00000384806.2:p.Gly631Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1849G>A
  hgvsp: ENSP00000353152.5:p.Gly617Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2065G>A
  hgvsp: ENSP00000424852.1:p.Gly689Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1351G>A
  hgvsp: ENSP00000351800.6:p.Gly451Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2074G>A
  hgvsp: ENSP00000442734.1:p.Gly692Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1867G>A
  hgvsp: ENSP00000425605.1:p.Gly623Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2074G>A
  hgvsp: ENSP00000423094.2:p.Gly692Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2257G>A
  hgvsp: ENSP00000345502.6:p.Gly753Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1993G>A
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly753Ser
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

5-58270667-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270667
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270667
    reference: chr 5
allele count: 3
allele frequency: 2.489791853401056e-5
allele num: 120492
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1348A>G
  hgvsp: ENSP00000351800.6:p.Ser450Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2254A>G
  hgvsp: ENSP00000345502.6:p.Ser752Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2071A>G
  hgvsp: ENSP00000442734.1:p.Ser691Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2062A>G
  hgvsp: ENSP00000424852.1:p.Ser688Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1846A>G
  hgvsp: ENSP00000353152.5:p.Ser616Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1990A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1864A>G
  hgvsp: ENSP00000425605.1:p.Ser622Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1381A>G
  hgvsp: ENSP00000321739.8:p.Ser461Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1888A>G
  hgvsp: ENSP00000384806.2:p.Ser630Gly
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2071A>G
  hgvsp: ENSP00000423094.2:p.Ser691Gly
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8955
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser752Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

5-58270672-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270672
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270672
    reference: chr 5
allele count: 1
allele frequency: 8.302613662781043e-6
allele num: 120444
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2066A>C
  hgvsp: ENSP00000442734.1:p.Lys689Thr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1376A>C
  hgvsp: ENSP00000321739.8:p.Lys459Thr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1343A>C
  hgvsp: ENSP00000351800.6:p.Lys448Thr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1985A>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2066A>C
  hgvsp: ENSP00000423094.2:p.Lys689Thr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2057A>C
  hgvsp: ENSP00000424852.1:p.Lys686Thr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2249A>C
  hgvsp: ENSP00000345502.6:p.Lys750Thr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1883A>C
  hgvsp: ENSP00000384806.2:p.Lys628Thr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1859A>C
  hgvsp: ENSP00000425605.1:p.Lys620Thr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1841A>C
  hgvsp: ENSP00000353152.5:p.Lys614Thr
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys750Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: T
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

5-58270677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270677
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270677
    reference: chr 5
allele count: 1
allele frequency: 8.305371914554334e-6
allele num: 120404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1878G>A
  hgvsp: ENST00000405755.2:c.1878G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2061G>A
  hgvsp: ENST00000546160.1:c.2061G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1854G>A
  hgvsp: ENST00000503258.1:c.1854G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2052G>A
  hgvsp: ENST00000507116.1:c.2052G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1371G>A
  hgvsp: ENST00000317118.8:c.1371G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2061G>A
  hgvsp: ENST00000502484.2:c.2061G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1338G>A
  hgvsp: ENST00000358923.6:c.1338G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2244G>A
  hgvsp: ENST00000340635.6:c.2244G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1836G>A
  hgvsp: ENST00000360047.5:c.1836G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1980G>A
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8945
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr748Thr
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

5-58270679-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270679
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270679
    reference: chr 5
allele count: 1
allele frequency: 8.305509875251242e-6
allele num: 120402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1336A>G
  hgvsp: ENSP00000351800.6:p.Thr446Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1834A>G
  hgvsp: ENSP00000353152.5:p.Thr612Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2050A>G
  hgvsp: ENSP00000424852.1:p.Thr684Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1369A>G
  hgvsp: ENSP00000321739.8:p.Thr457Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2059A>G
  hgvsp: ENSP00000423094.2:p.Thr687Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2059A>G
  hgvsp: ENSP00000442734.1:p.Thr687Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1876A>G
  hgvsp: ENSP00000384806.2:p.Thr626Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1852A>G
  hgvsp: ENSP00000425605.1:p.Thr618Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1978A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2242A>G
  hgvsp: ENSP00000345502.6:p.Thr748Ala
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8926
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr748Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/5-58270686-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270686
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270686
    reference: chr 5
allele count: 3
allele frequency: 2.493060980271577e-5
allele num: 120334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1845G>T
  hgvsp: ENSP00000425605.1:p.Glu615Asp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2235G>T
  hgvsp: ENSP00000345502.6:p.Glu745Asp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1362G>T
  hgvsp: ENSP00000321739.8:p.Glu454Asp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1869G>T
  hgvsp: ENSP00000384806.2:p.Glu623Asp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2052G>T
  hgvsp: ENSP00000423094.2:p.Glu684Asp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1827G>T
  hgvsp: ENSP00000353152.5:p.Glu609Asp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2043G>T
  hgvsp: ENSP00000424852.1:p.Glu681Asp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1329G>T
  hgvsp: ENSP00000351800.6:p.Glu443Asp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2052G>T
  hgvsp: ENSP00000442734.1:p.Glu684Asp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1971G>T
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu745Asp
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

5-58270686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270686
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270686
    reference: chr 5
allele count: 1
allele frequency: 8.310203267571925e-6
allele num: 120334
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2235G>A
  hgvsp: ENST00000340635.6:c.2235G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1827G>A
  hgvsp: ENST00000360047.5:c.1827G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1362G>A
  hgvsp: ENST00000317118.8:c.1362G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1329G>A
  hgvsp: ENST00000358923.6:c.1329G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1845G>A
  hgvsp: ENST00000503258.1:c.1845G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2052G>A
  hgvsp: ENST00000502484.2:c.2052G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1971G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2043G>A
  hgvsp: ENST00000507116.1:c.2043G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2052G>A
  hgvsp: ENST00000546160.1:c.2052G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1869G>A
  hgvsp: ENST00000405755.2:c.1869G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8938
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu745Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/5-58270694-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270694
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270694
    reference: chr 5
allele count: 1
allele frequency: 8.313519445321983e-6
allele num: 120286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1321G>T
  hgvsp: ENSP00000351800.6:p.Asp441Tyr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1963G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1837G>T
  hgvsp: ENSP00000425605.1:p.Asp613Tyr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1861G>T
  hgvsp: ENSP00000384806.2:p.Asp621Tyr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1819G>T
  hgvsp: ENSP00000353152.5:p.Asp607Tyr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1354G>T
  hgvsp: ENSP00000321739.8:p.Asp452Tyr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2035G>T
  hgvsp: ENSP00000424852.1:p.Asp679Tyr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2044G>T
  hgvsp: ENSP00000442734.1:p.Asp682Tyr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2227G>T
  hgvsp: ENSP00000345502.6:p.Asp743Tyr
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2044G>T
  hgvsp: ENSP00000423094.2:p.Asp682Tyr
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp743Tyr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

5-58270705-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270705
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270705
    reference: chr 5
allele count: 1
allele frequency: 8.314487162431821e-6
allele num: 120272
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2216C>T
  hgvsp: ENSP00000345502.6:p.Thr739Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2033C>T
  hgvsp: ENSP00000442734.1:p.Thr678Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.2024C>T
  hgvsp: ENSP00000424852.1:p.Thr675Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1826C>T
  hgvsp: ENSP00000425605.1:p.Thr609Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1343C>T
  hgvsp: ENSP00000321739.8:p.Thr448Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1850C>T
  hgvsp: ENSP00000384806.2:p.Thr617Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1808C>T
  hgvsp: ENSP00000353152.5:p.Thr603Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1310C>T
  hgvsp: ENSP00000351800.6:p.Thr437Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2033C>T
  hgvsp: ENSP00000423094.2:p.Thr678Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1952C>T
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 15740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr739Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/5-58270734-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270734
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270734
    reference: chr 5
allele count: 2
allele frequency: 1.663865825859803e-5
allele num: 120202
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1923T>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1281T>G
  hgvsp: ENST00000358923.6:c.1281T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1779T>G
  hgvsp: ENST00000360047.5:c.1779T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1314T>G
  hgvsp: ENST00000317118.8:c.1314T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2187T>G
  hgvsp: ENST00000340635.6:c.2187T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2004T>G
  hgvsp: ENST00000546160.1:c.2004T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1821T>G
  hgvsp: ENST00000405755.2:c.1821T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1797T>G
  hgvsp: ENST00000503258.1:c.1797T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1995T>G
  hgvsp: ENST00000507116.1:c.1995T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2004T>G
  hgvsp: ENST00000502484.2:c.2004T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29985
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8923
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly729Gly
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/5-58270737-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270737
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270737
    reference: chr 5
allele count: 7
allele frequency: 5.821786789534091e-5
allele num: 120238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1278G>T
  hgvsp: ENSP00000351800.6:p.Gln426His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1311G>T
  hgvsp: ENSP00000321739.8:p.Gln437His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1920G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2001G>T
  hgvsp: ENSP00000442734.1:p.Gln667His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2184G>T
  hgvsp: ENSP00000345502.6:p.Gln728His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1992G>T
  hgvsp: ENSP00000424852.1:p.Gln664His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1818G>T
  hgvsp: ENSP00000384806.2:p.Gln606His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2001G>T
  hgvsp: ENSP00000423094.2:p.Gln667His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1794G>T
  hgvsp: ENSP00000425605.1:p.Gln598His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1776G>T
  hgvsp: ENSP00000353152.5:p.Gln592His
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30116
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15934
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8943
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln728His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

5-58270737-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270737
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270737
    reference: chr 5
allele count: 1
allele frequency: 8.316838270762986e-6
allele num: 120238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1278G>A
  hgvsp: ENST00000358923.6:c.1278G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.2001G>A
  hgvsp: ENST00000502484.2:c.2001G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1776G>A
  hgvsp: ENST00000360047.5:c.1776G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1992G>A
  hgvsp: ENST00000507116.1:c.1992G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1920G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1794G>A
  hgvsp: ENST00000503258.1:c.1794G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2184G>A
  hgvsp: ENST00000340635.6:c.2184G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1818G>A
  hgvsp: ENST00000405755.2:c.1818G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1311G>A
  hgvsp: ENST00000317118.8:c.1311G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.2001G>A
  hgvsp: ENST00000546160.1:c.2001G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30116
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln728Gln
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP

5-58270741-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270741
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270741
    reference: chr 5
allele count: 7
allele frequency: 5.821883628863236e-5
allele num: 120236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1307G>A
  hgvsp: ENSP00000321739.8:p.Arg436Gln
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2180G>A
  hgvsp: ENSP00000345502.6:p.Arg727Gln
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1997G>A
  hgvsp: ENSP00000423094.2:p.Arg666Gln
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1988G>A
  hgvsp: ENSP00000424852.1:p.Arg663Gln
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1772G>A
  hgvsp: ENSP00000353152.5:p.Arg591Gln
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1814G>A
  hgvsp: ENSP00000384806.2:p.Arg605Gln
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1274G>A
  hgvsp: ENSP00000351800.6:p.Arg425Gln
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1790G>A
  hgvsp: ENSP00000425605.1:p.Arg597Gln
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1997G>A
  hgvsp: ENSP00000442734.1:p.Arg666Gln
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1916G>A
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30209
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1792
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg727Gln
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ

5-58270742-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270742
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270742
    reference: chr 5
allele count: 2
allele frequency: 1.662980393461161e-5
allele num: 120266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1813C>T
  hgvsp: ENSP00000384806.2:p.Arg605Trp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1771C>T
  hgvsp: ENSP00000353152.5:p.Arg591Trp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1987C>T
  hgvsp: ENSP00000424852.1:p.Arg663Trp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2179C>T
  hgvsp: ENSP00000345502.6:p.Arg727Trp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1789C>T
  hgvsp: ENSP00000425605.1:p.Arg597Trp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1273C>T
  hgvsp: ENSP00000351800.6:p.Arg425Trp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1996C>T
  hgvsp: ENSP00000442734.1:p.Arg666Trp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1306C>T
  hgvsp: ENSP00000321739.8:p.Arg436Trp
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1915C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1996C>T
  hgvsp: ENSP00000423094.2:p.Arg666Trp
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg727Trp
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/5-58270782-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270782
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270782
    reference: chr 5
allele count: 1
allele frequency: 8.331389342486753e-6
allele num: 120028
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1233T>G
  hgvsp: ENST00000505453.1:c.1233T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1956T>G
  hgvsp: ENST00000546160.1:c.1956T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1266T>G
  hgvsp: ENST00000317118.8:c.1266T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1749T>G
  hgvsp: ENST00000503258.1:c.1749T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1773T>G
  hgvsp: ENST00000405755.2:c.1773T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1875T>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1233T>G
  hgvsp: ENST00000358923.6:c.1233T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1956T>G
  hgvsp: ENST00000502484.2:c.1956T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1731T>G
  hgvsp: ENST00000360047.5:c.1731T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1947T>G
  hgvsp: ENST00000507116.1:c.1947T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2139T>G
  hgvsp: ENST00000340635.6:c.2139T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1343T>G
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30456
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro713Pro
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: A
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-58270784-GGATTGTGCTCTGGTACCATTCAC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270784
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270761
    reference: chr 5
allele count: 1
allele frequency: 8.332916687498959e-6
allele num: 120006
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsp: ENSP00000442734.1:p.Arg644ProfsTer9
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsp: ENSP00000345502.6:p.Arg705ProfsTer9
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsp: ENSP00000425605.1:p.Arg575ProfsTer9
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsp: ENSP00000384806.2:p.Arg583ProfsTer9
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsp: ENSP00000353152.5:p.Arg569ProfsTer9
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsp: ENSP00000321739.8:p.Arg414ProfsTer9
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsp: ENSP00000423094.2:p.Arg644ProfsTer9
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsp: ENSP00000421013.1:p.Arg403ProfsTer9
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsp: ENSP00000351800.6:p.Arg403ProfsTer9
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsp: ENSP00000424852.1:p.Arg641ProfsTer9
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 8903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg705ProfsTer9
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: GGATTGTGCTCTGGTACCATTCAC
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

5-58270788-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270788
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270788
    reference: chr 5
allele count: 66
allele frequency: 5.505046292434731e-4
allele num: 119890
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1869A>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1227A>C
  hgvsp: ENST00000505453.1:c.1227A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1743A>C
  hgvsp: ENST00000503258.1:c.1743A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1950A>C
  hgvsp: ENST00000502484.2:c.1950A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2133A>C
  hgvsp: ENST00000340635.6:c.2133A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1260A>C
  hgvsp: ENST00000317118.8:c.1260A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1950A>C
  hgvsp: ENST00000546160.1:c.1950A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1337A>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1725A>C
  hgvsp: ENST00000360047.5:c.1725A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1227A>C
  hgvsp: ENST00000358923.6:c.1227A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1941A>C
  hgvsp: ENST00000507116.1:c.1941A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1767A>C
  hgvsp: ENST00000405755.2:c.1767A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30410
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Thr711Thr
num of homozygotes: 3
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum

5-58270791-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270791
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270791
    reference: chr 5
allele count: 1
allele frequency: 8.345016356232058e-6
allele num: 119832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1947C>T
  hgvsp: ENST00000502484.2:c.1947C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1224C>T
  hgvsp: ENST00000505453.1:c.1224C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1947C>T
  hgvsp: ENST00000546160.1:c.1947C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1334C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2130C>T
  hgvsp: ENST00000340635.6:c.2130C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1740C>T
  hgvsp: ENST00000503258.1:c.1740C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1722C>T
  hgvsp: ENST00000360047.5:c.1722C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1257C>T
  hgvsp: ENST00000317118.8:c.1257C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1938C>T
  hgvsp: ENST00000507116.1:c.1938C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1764C>T
  hgvsp: ENST00000405755.2:c.1764C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1866C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1224C>T
  hgvsp: ENST00000358923.6:c.1224C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser710Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

5-58270792-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270792
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270792
    reference: chr 5
allele count: 1
allele frequency: 8.347942232239753e-6
allele num: 119790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1946G>A
  hgvsp: ENSP00000423094.2:p.Ser649Asn
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1739G>A
  hgvsp: ENSP00000425605.1:p.Ser580Asn
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1937G>A
  hgvsp: ENSP00000424852.1:p.Ser646Asn
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1721G>A
  hgvsp: ENSP00000353152.5:p.Ser574Asn
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1223G>A
  hgvsp: ENSP00000351800.6:p.Ser408Asn
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1256G>A
  hgvsp: ENSP00000321739.8:p.Ser419Asn
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1763G>A
  hgvsp: ENSP00000384806.2:p.Ser588Asn
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1223G>A
  hgvsp: ENSP00000421013.1:p.Ser408Asn
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1333G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2129G>A
  hgvsp: ENSP00000345502.6:p.Ser710Asn
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1946G>A
  hgvsp: ENSP00000442734.1:p.Ser649Asn
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1865G>A
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser710Asn
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

5-58270827-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270827
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270827
    reference: chr 5
allele count: 1
allele frequency: 8.653812869950501e-6
allele num: 115556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1221G>A
  hgvsp: ENST00000317118.8:c.1221G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1911G>A
  hgvsp: ENST00000502484.2:c.1911G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1704G>A
  hgvsp: ENST00000503258.1:c.1704G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1830G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1728G>A
  hgvsp: ENST00000405755.2:c.1728G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2094G>A
  hgvsp: ENST00000340635.6:c.2094G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1188G>A
  hgvsp: ENST00000358923.6:c.1188G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1298G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1911G>A
  hgvsp: ENST00000546160.1:c.1911G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1188G>A
  hgvsp: ENST00000505453.1:c.1188G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1902G>A
  hgvsp: ENST00000507116.1:c.1902G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1686G>A
  hgvsp: ENST00000360047.5:c.1686G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu698Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

5-58270834-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270834
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270834
    reference: chr 5
allele count: 1
allele frequency: 8.890785589814717e-6
allele num: 112476
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1214A>T
  hgvsp: ENSP00000321739.8:p.Asp405Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1181A>T
  hgvsp: ENSP00000351800.6:p.Asp394Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1679A>T
  hgvsp: ENSP00000353152.5:p.Asp560Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1895A>T
  hgvsp: ENSP00000424852.1:p.Asp632Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1291A>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1904A>T
  hgvsp: ENSP00000423094.2:p.Asp635Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2087A>T
  hgvsp: ENSP00000345502.6:p.Asp696Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1904A>T
  hgvsp: ENSP00000442734.1:p.Asp635Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1697A>T
  hgvsp: ENSP00000425605.1:p.Asp566Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1721A>T
  hgvsp: ENSP00000384806.2:p.Asp574Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1181A>T
  hgvsp: ENSP00000421013.1:p.Asp394Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1823A>T
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3851
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6357
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp696Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

5-58270840-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270840
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270840
    reference: chr 5
allele count: 1
allele frequency: 9.057971014492753e-6
allele num: 110400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1715C>T
  hgvsp: ENSP00000384806.2:p.Ala572Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1898C>T
  hgvsp: ENSP00000442734.1:p.Ala633Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1208C>T
  hgvsp: ENSP00000321739.8:p.Ala403Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1175C>T
  hgvsp: ENSP00000351800.6:p.Ala392Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1285C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1175C>T
  hgvsp: ENSP00000421013.1:p.Ala392Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2081C>T
  hgvsp: ENSP00000345502.6:p.Ala694Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1691C>T
  hgvsp: ENSP00000425605.1:p.Ala564Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1898C>T
  hgvsp: ENSP00000423094.2:p.Ala633Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1817C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1673C>T
  hgvsp: ENSP00000353152.5:p.Ala558Val
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1889C>T
  hgvsp: ENSP00000424852.1:p.Ala630Val
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4812
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15669
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala694Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

5-58270842-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270842
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270842
    reference: chr 5
allele count: 3
allele frequency: 2.735828408842197e-5
allele num: 109656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1283C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1896C>T
  hgvsp: ENST00000502484.2:c.1896C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1206C>T
  hgvsp: ENST00000317118.8:c.1206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1887C>T
  hgvsp: ENST00000507116.1:c.1887C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1713C>T
  hgvsp: ENST00000405755.2:c.1713C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1896C>T
  hgvsp: ENST00000546160.1:c.1896C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1671C>T
  hgvsp: ENST00000360047.5:c.1671C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1689C>T
  hgvsp: ENST00000503258.1:c.1689C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1173C>T
  hgvsp: ENST00000505453.1:c.1173C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2079C>T
  hgvsp: ENST00000340635.6:c.2079C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1815C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1173C>T
  hgvsp: ENST00000358923.6:c.1173C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5335
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24289
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15682
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp693Asp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

5-58270853-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270853
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270853
    reference: chr 5
allele count: 1
allele frequency: 9.620750033672625e-6
allele num: 103942
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1702G>A
  hgvsp: ENSP00000384806.2:p.Val568Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1678G>A
  hgvsp: ENSP00000425605.1:p.Val560Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1272G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1804G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1162G>A
  hgvsp: ENSP00000421013.1:p.Val388Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1195G>A
  hgvsp: ENSP00000321739.8:p.Val399Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1885G>A
  hgvsp: ENSP00000442734.1:p.Val629Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1660G>A
  hgvsp: ENSP00000353152.5:p.Val554Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1885G>A
  hgvsp: ENSP00000423094.2:p.Val629Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1162G>A
  hgvsp: ENSP00000351800.6:p.Val388Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1876G>A
  hgvsp: ENSP00000424852.1:p.Val626Ile
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2068G>A
  hgvsp: ENSP00000345502.6:p.Val690Ile
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16132
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7621
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6554
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val690Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

5-58270854-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270854
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270854
    reference: chr 5
allele count: 1
allele frequency: 9.624639076034649e-6
allele num: 103900
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2067C>A
  hgvsp: ENST00000340635.6:c.2067C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1884C>A
  hgvsp: ENST00000502484.2:c.1884C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1701C>A
  hgvsp: ENST00000405755.2:c.1701C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1194C>A
  hgvsp: ENST00000317118.8:c.1194C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1884C>A
  hgvsp: ENST00000546160.1:c.1884C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1161C>A
  hgvsp: ENST00000505453.1:c.1161C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1875C>A
  hgvsp: ENST00000507116.1:c.1875C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1271C>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1659C>A
  hgvsp: ENST00000360047.5:c.1659C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1161C>A
  hgvsp: ENST00000358923.6:c.1161C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1803C>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1677C>A
  hgvsp: ENST00000503258.1:c.1677C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20243
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7728
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu689Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-58270855-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270855
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270855
    reference: chr 5
allele count: 1
allele frequency: 9.692552242856589e-6
allele num: 103172
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1676T>A
  hgvsp: ENSP00000425605.1:p.Leu559His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1160T>A
  hgvsp: ENSP00000351800.6:p.Leu387His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1193T>A
  hgvsp: ENSP00000321739.8:p.Leu398His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1883T>A
  hgvsp: ENSP00000442734.1:p.Leu628His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1270T>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1160T>A
  hgvsp: ENSP00000421013.1:p.Leu387His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1883T>A
  hgvsp: ENSP00000423094.2:p.Leu628His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1658T>A
  hgvsp: ENSP00000353152.5:p.Leu553His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2066T>A
  hgvsp: ENSP00000345502.6:p.Leu689His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1874T>A
  hgvsp: ENSP00000424852.1:p.Leu625His
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1802T>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1700T>A
  hgvsp: ENSP00000384806.2:p.Leu567His
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6856
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu689His
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

5-58270869-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270869
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270869
    reference: chr 5
allele count: 1
allele frequency: 1.04936198791135e-5
allele num: 95296
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2052G>A
  hgvsp: ENST00000340635.6:c.2052G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1788G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1869G>A
  hgvsp: ENST00000502484.2:c.1869G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1179G>A
  hgvsp: ENST00000317118.8:c.1179G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1860G>A
  hgvsp: ENST00000507116.1:c.1860G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1256G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1662G>A
  hgvsp: ENST00000503258.1:c.1662G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1869G>A
  hgvsp: ENST00000546160.1:c.1869G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1146G>A
  hgvsp: ENST00000505453.1:c.1146G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1146G>A
  hgvsp: ENST00000358923.6:c.1146G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1644G>A
  hgvsp: ENST00000360047.5:c.1644G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1686G>A
  hgvsp: ENST00000405755.2:c.1686G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15012
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9240
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu684Glu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum

5-58270877-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270877
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270877
    reference: chr 5
allele count: 3
allele frequency: 3.359161553276302e-5
allele num: 89308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1248C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1138C>T
  hgvsp: ENSP00000351800.6:p.Leu380Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1636C>T
  hgvsp: ENSP00000353152.5:p.Leu546Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1861C>T
  hgvsp: ENSP00000423094.2:p.Leu621Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1138C>T
  hgvsp: ENSP00000421013.1:p.Leu380Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1852C>T
  hgvsp: ENSP00000424852.1:p.Leu618Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1861C>T
  hgvsp: ENSP00000442734.1:p.Leu621Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1171C>T
  hgvsp: ENSP00000321739.8:p.Leu391Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1654C>T
  hgvsp: ENSP00000425605.1:p.Leu552Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1780C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1678C>T
  hgvsp: ENSP00000384806.2:p.Leu560Phe
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2044C>T
  hgvsp: ENSP00000345502.6:p.Leu682Phe
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13210
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13906
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13417
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu682Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

5-58270885-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270885
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270885
    reference: chr 5
allele count: 1
allele frequency: 1.195685965038142e-5
allele num: 83634
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1130T>C
  hgvsp: ENSP00000421013.1:p.Val377Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1628T>C
  hgvsp: ENSP00000353152.5:p.Val543Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1844T>C
  hgvsp: ENSP00000424852.1:p.Val615Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1130T>C
  hgvsp: ENSP00000351800.6:p.Val377Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1853T>C
  hgvsp: ENSP00000423094.2:p.Val618Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1853T>C
  hgvsp: ENSP00000442734.1:p.Val618Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1646T>C
  hgvsp: ENSP00000425605.1:p.Val549Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1240T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2036T>C
  hgvsp: ENSP00000345502.6:p.Val679Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1772T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1163T>C
  hgvsp: ENSP00000321739.8:p.Val388Ala
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1670T>C
  hgvsp: ENSP00000384806.2:p.Val557Ala
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10692
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11540
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val679Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

5-58270908-C-CTAGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270908
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270912
    reference: chr 5
allele count: 1
allele frequency: 1.524715640533041e-5
allele num: 65586
alternate allele: CTAGT
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1831-5_1831-2dupACTA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1141-5_1141-2dupACTA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1218-5_*1218-2dupACTA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1831-5_1831-2dupACTA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1606-5_1606-2dupACTA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1624-5_1624-2dupACTA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1108-5_1108-2dupACTA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1822-5_1822-2dupACTA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1750-5_1750-2dupACTA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2014-5_2014-2dupACTA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1108-5_1108-2dupACTA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1648-5_1648-2dupACTA
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6066
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2014-5_2014-2dupACTA
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

5-58270916-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270916
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270917
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 60602
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1822-10dupT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1831-10dupT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1648-10dupT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1831-10dupT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1108-10dupT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1606-10dupT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1108-10dupT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2014-10dupT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1750-10dupT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1218-10dupT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1141-10dupT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1624-10dupT
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7746
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19274
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

5-58270916-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270916
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270915
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 60602
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1141-10delT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1648-10delT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1831-10delT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1108-10delT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1108-10delT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2014-10delT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1606-10delT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1822-10delT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1624-10delT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1750-10delT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1831-10delT
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1218-10delT
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 7746
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21304
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: GA
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

5-58270924-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270924
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270924
    reference: chr 5
allele count: 2
allele frequency: 3.589375448671931e-5
allele num: 55720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1822-17A>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1108-17A>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1624-17A>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2014-17A>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1831-17A>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1750-17A>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1831-17A>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1648-17A>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1218-17A>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1108-17A>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1141-17A>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1606-17A>T
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9981
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21250
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18918
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-58270928-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270928
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270927
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 52834
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1750-22delA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1648-22delA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1218-22delA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1108-22delA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1108-22delA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1606-22delA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1831-22delA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1831-22delA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1822-22delA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1141-22delA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1624-22delA
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2014-22delA
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 21434
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18054
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11254
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: GT
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/5-58270930-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270930
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270930
    reference: chr 5
allele count: 13
allele frequency: 2.522312766783081e-4
allele num: 51540
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1108-23T>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1108-23T>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1624-23T>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1141-23T>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1831-23T>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1606-23T>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2014-23T>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1648-23T>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1831-23T>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1750-23T>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1822-23T>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1218-23T>G
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17535
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21576
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11810
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: A
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

5-58270930-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270930
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270930
    reference: chr 5
allele count: 1
allele frequency: 1.940240589833139e-5
allele num: 51540
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2014-23T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1822-23T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1108-23T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1606-23T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1141-23T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1831-23T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1624-23T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1831-23T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1648-23T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1750-23T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1108-23T>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1218-23T>C
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17535
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11810
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21576
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

5-58270930-ATGAGTAGAGGACTTGGGACTAAGAAACAATGGAAAAGC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270930
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270892
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 51540
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 21576
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17535
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11810
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: ATGAGTAGAGGACTTGGGACTAAGAAACAATGGAAAAGC
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

5-58270932-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270932
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270932
    reference: chr 5
allele count: 1
allele frequency: 1.995530012771392e-5
allele num: 50112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1750-25C>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2014-25C>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1624-25C>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1218-25C>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1141-25C>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1108-25C>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1606-25C>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1831-25C>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1822-25C>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1648-25C>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1108-25C>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1831-25C>G
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17108
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

5-58270946-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58270946
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58270946
    reference: chr 5
allele count: 1
allele frequency: 2.563445270443476e-5
allele num: 39010
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2014-39C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1108-39C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1831-39C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1218-39C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1141-39C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1606-39C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1750-39C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1108-39C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1648-39C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1831-39C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1624-39C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1822-39C>T
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14626
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

5-58271441-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58271441
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58271441
    reference: chr 5
allele count: 3
allele frequency: 2.835110002268088e-5
allele num: 105816
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1605+43C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1107+43C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1217+43C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1749+43C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2013+43C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1623+43C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1821+43C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1830+43C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1647+43C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1107+43C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1140+43C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1830+43C>T
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8273
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9625
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6899
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

5-58271442-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58271442
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58271442
    reference: chr 5
allele count: 1
allele frequency: 9.383327703336711e-6
allele num: 106572
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1749+42C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1623+42C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2013+42C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1107+42C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1605+42C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1830+42C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1217+42C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1107+42C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1647+42C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1140+42C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1830+42C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1821+42C>T
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9486
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

5-58271455-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58271455
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58271455
    reference: chr 5
allele count: 1
allele frequency: 9.274889165074477e-6
allele num: 107818
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1830+29G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1605+29G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1217+29G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1107+29G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1623+29G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1830+29G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1107+29G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1140+29G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1821+29G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1647+29G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2013+29G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1749+29G>A
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

5-58271469-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58271469
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58271469
    reference: chr 5
allele count: 1
allele frequency: 9.084632435771648e-6
allele num: 110076
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1605+15G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1217+15G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1830+15G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1107+15G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1830+15G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1647+15G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1821+15G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1140+15G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1749+15G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1623+15G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2013+15G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1107+15G>A
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4724
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/5-58271469-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58271469
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58271469
    reference: chr 5
allele count: 1
allele frequency: 9.084632435771648e-6
allele num: 110076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1605+15G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1830+15G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1623+15G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1647+15G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1217+15G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2013+15G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1140+15G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1107+15G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1821+15G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1107+15G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1749+15G>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1830+15G>T
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4724
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29454
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

5-58271476-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58271476
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58271476
    reference: chr 5
allele count: 1
allele frequency: 8.982627598225034e-6
allele num: 111326
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1749+8A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1821+8A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1605+8A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1830+8A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1830+8A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1623+8A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2013+8A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1107+8A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1107+8A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1647+8A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1140+8A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1217+8A>G
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2013+8A>G
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

5-58271481-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58271481
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58271481
    reference: chr 5
allele count: 2
allele frequency: 1.783294100863114e-5
allele num: 112152
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1830+3A>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.2013+3A>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1821+3A>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1107+3A>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1605+3A>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1140+3A>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1623+3A>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1647+3A>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1217+3A>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1830+3A>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1749+3A>C
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1107+3A>C
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10315
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2013+3A>C
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

5-58271498-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58271498
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58271498
    reference: chr 5
allele count: 1
allele frequency: 8.732404205525866e-6
allele num: 114516
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1735G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.1999G>A
  hgvsp: ENSP00000345502.6:p.Val667Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1093G>A
  hgvsp: ENSP00000351800.6:p.Val365Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1609G>A
  hgvsp: ENSP00000425605.1:p.Val537Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1807G>A
  hgvsp: ENSP00000424852.1:p.Val603Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1203G>A
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1816G>A
  hgvsp: ENSP00000442734.1:p.Val606Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1126G>A
  hgvsp: ENSP00000321739.8:p.Val376Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1591G>A
  hgvsp: ENSP00000353152.5:p.Val531Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1816G>A
  hgvsp: ENSP00000423094.2:p.Val606Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1093G>A
  hgvsp: ENSP00000421013.1:p.Val365Met
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1633G>A
  hgvsp: ENSP00000384806.2:p.Val545Met
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30950
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val667Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

5-58271499-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58271499
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58271499
    reference: chr 5
allele count: 2
allele frequency: 1.739705293923209e-5
allele num: 114962
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1632C>T
  hgvsp: ENST00000405755.2:c.1632C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1092C>T
  hgvsp: ENST00000505453.1:c.1092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.1998C>T
  hgvsp: ENST00000340635.6:c.1998C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1815C>T
  hgvsp: ENST00000502484.2:c.1815C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1590C>T
  hgvsp: ENST00000360047.5:c.1590C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1608C>T
  hgvsp: ENST00000503258.1:c.1608C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1092C>T
  hgvsp: ENST00000358923.6:c.1092C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1734C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1815C>T
  hgvsp: ENST00000546160.1:c.1815C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1202C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1806C>T
  hgvsp: ENST00000507116.1:c.1806C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1125C>T
  hgvsp: ENST00000317118.8:c.1125C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31061
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2848
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser666Ser
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

5-58271506-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58271506
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58271506
    reference: chr 5
allele count: 1
allele frequency: 8.605259534627564e-6
allele num: 116208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1195A>G
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1085A>G
  hgvsp: ENSP00000421013.1:p.Asn362Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1625A>G
  hgvsp: ENSP00000384806.2:p.Asn542Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1808A>G
  hgvsp: ENSP00000423094.2:p.Asn603Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1799A>G
  hgvsp: ENSP00000424852.1:p.Asn600Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1085A>G
  hgvsp: ENSP00000351800.6:p.Asn362Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1601A>G
  hgvsp: ENSP00000425605.1:p.Asn534Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.1991A>G
  hgvsp: ENSP00000345502.6:p.Asn664Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1808A>G
  hgvsp: ENSP00000442734.1:p.Asn603Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1118A>G
  hgvsp: ENSP00000321739.8:p.Asn373Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1583A>G
  hgvsp: ENSP00000353152.5:p.Asn528Ser
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1727A>G
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31638
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn664Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

5-58271508-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 58271508
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 58271508
    reference: chr 5
allele count: 5
allele frequency: 4.290814224907319e-5
allele num: 116528
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000423094
  ensembl transcript: ENST00000502484
  gene symbol: PDE4D
  hgvsc: ENST00000502484.2:c.1806C>T
  hgvsp: ENST00000502484.2:c.1806C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000308485
  ensembl transcript: ENST00000309641
  gene symbol: PDE4D
  hgvsc: ENST00000309641.6:c.*1193C>T
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000353152
  ensembl transcript: ENST00000360047
  gene symbol: PDE4D
  hgvsc: ENST00000360047.5:c.1581C>T
  hgvsp: ENST00000360047.5:c.1581C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000442734
  ensembl transcript: ENST00000546160
  gene symbol: PDE4D
  hgvsc: ENST00000546160.1:c.1806C>T
  hgvsp: ENST00000546160.1:c.1806C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000321739
  ensembl transcript: ENST00000317118
  gene symbol: PDE4D
  hgvsc: ENST00000317118.8:c.1116C>T
  hgvsp: ENST00000317118.8:c.1116C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000384806
  ensembl transcript: ENST00000405755
  gene symbol: PDE4D
  hgvsc: ENST00000405755.2:c.1623C>T
  hgvsp: ENST00000405755.2:c.1623C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000424852
  ensembl transcript: ENST00000507116
  gene symbol: PDE4D
  hgvsc: ENST00000507116.1:c.1797C>T
  hgvsp: ENST00000507116.1:c.1797C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000421013
  ensembl transcript: ENST00000505453
  gene symbol: PDE4D
  hgvsc: ENST00000505453.1:c.1083C>T
  hgvsp: ENST00000505453.1:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000345502
  ensembl transcript: ENST00000340635
  gene symbol: PDE4D
  hgvsc: ENST00000340635.6:c.1989C>T
  hgvsp: ENST00000340635.6:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000425605
  ensembl transcript: ENST00000503258
  gene symbol: PDE4D
  hgvsc: ENST00000503258.1:c.1599C>T
  hgvsp: ENST00000503258.1:c.1599C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000113448
  ensembl protein: ENSP00000351800
  ensembl transcript: ENST00000358923
  gene symbol: PDE4D
  hgvsc: ENST00000358923.6:c.1083C>T
  hgvsp: ENST00000358923.6:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8783
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000113448
  ensembl transcript: ENST00000515011
  gene symbol: PDE4D
  hgvsc: ENST00000515011.1:n.1725C>T
  variant of: http://identifiers.org/hgnc/8783
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His663His
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41377
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2420
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2204
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 7729
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.582251412860852e-5
allele num: 65470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12926
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.471e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.75e0

DP
type: SiteQuality
SIO_000300: 1.642113e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

FS
type: SiteQuality
SIO_000300: 5.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

QD
type: SiteQuality
SIO_000300: 1.318e1

GenotypeQuality
all individuals: 178
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41271
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1948
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2324
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7712
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2201
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 331
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.054231717337716e-4
allele num: 9736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.674e0

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

MQRankSum
type: SiteQuality
SIO_000300: 2.34e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.478e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.64279e6

QD
type: SiteQuality
SIO_000300: 1.33e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.516e0

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41513
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2185
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2223
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7736
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1952
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65556
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.026272577996716e-4
allele num: 9744
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.26e-2

DP
type: SiteQuality
SIO_000300: 1.648339e6

QD
type: SiteQuality
SIO_000300: 1.333e1

MQ
type: SiteQuality
SIO_000300: 5.989e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: 2.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.91e-1

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7736
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2185
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41513
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1952
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 84
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2223
bin: 9.75e1
variant carriers: 50

South Asian
type: Population
allele count: 43
allele frequency: 3.244303606458428e-3
allele num: 13254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161710037174721e-4
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.627066935139423e-5
allele num: 65556
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e-1

QD
type: SiteQuality
SIO_000300: 1.333e1

DP
type: SiteQuality
SIO_000300: 1.648339e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.26e-2

MQ
type: SiteQuality
SIO_000300: 5.989e1

FS
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: 2.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.91e-1

GenotypeQuality
all individuals: 331
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7770
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2173
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 103
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.024800163968026e-4
allele num: 9758
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14028
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 1.654095e6

MQRankSum
type: SiteQuality
SIO_000300: -5.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

FS
type: SiteQuality
SIO_000300: 2.057e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.381e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e0

QD
type: SiteQuality
SIO_000300: 1.476e1

GenotypeQuality
all individuals: 169
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2173
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1972
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7897
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43228
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1794
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.490977541217708e-5
allele num: 15406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.387e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
SIO_000300: 2.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.675307e6

FS
type: SiteQuality
SIO_000300: 2.619e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.97e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.393e1

GenotypeQuality
all individuals: 95
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1989
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7954
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43834
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1803
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.02082482645978e-4
allele num: 9796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66432
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.436e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.597e0

DP
type: SiteQuality
SIO_000300: 1.681015e6

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: -7.67e-1

MQ
type: SiteQuality
SIO_000300: 5.742e1

QD
type: SiteQuality
SIO_000300: 1.729e1

GenotypeQuality
all individuals: 2172
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44490
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1814
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7998
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variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16212
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.689858e6

MQ
type: SiteQuality
SIO_000300: 5.636e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

FS
type: SiteQuality
SIO_000300: 7.159e0

VQSLOD
type: SiteQuality
SIO_000300: 8.8e-1

QD
type: SiteQuality
SIO_000300: 1.608e1

MQRankSum
type: SiteQuality
SIO_000300: -2.065e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.252e0

GenotypeQuality
all individuals: 2170
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44550
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 2008
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8008
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1813
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 7.335e0

DP
type: SiteQuality
SIO_000300: 1.690873e6

MQRankSum
type: SiteQuality
SIO_000300: 2.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e1

VQSLOD
type: SiteQuality
SIO_000300: 6.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.874e0

QD
type: SiteQuality
SIO_000300: 1.336e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2010
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8023
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1814
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2169
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 47
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44655
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 4.081632653061225e-4
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.281e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

FS
type: SiteQuality
SIO_000300: 1.094e0

QD
type: SiteQuality
SIO_000300: 1.551e1

DP
type: SiteQuality
SIO_000300: 1.692367e6

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.13e-1

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2165
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2010
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.33e0

QD
type: SiteQuality
SIO_000300: 1.496e1

FS
type: SiteQuality
SIO_000300: 2.465e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.19e0

DP
type: SiteQuality
SIO_000300: 1.692702e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

GenotypeQuality
all individuals: 107
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.044e0

MQ
type: SiteQuality
SIO_000300: 5.509e1

QD
type: SiteQuality
SIO_000300: 1.452e1

FS
type: SiteQuality
SIO_000300: 6.255e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.33e-1

DP
type: SiteQuality
SIO_000300: 1.692599e6

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.31e-1

QD
type: SiteQuality
SIO_000300: 1.31e1

DP
type: SiteQuality
SIO_000300: 1.692363e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.693e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.07e-2

FS
type: SiteQuality
SIO_000300: 3.445e0

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8040
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

FS
type: SiteQuality
SIO_000300: 4.882e0

QD
type: SiteQuality
SIO_000300: 1.382e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.67e0

VQSLOD
type: SiteQuality
SIO_000300: 4.67e-1

DP
type: SiteQuality
SIO_000300: 1.692361e6

MQ
type: SiteQuality
SIO_000300: 5.937e1

GenotypeQuality
all individuals: 74
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44580
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8033
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2010
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.100536847242558e-5
allele num: 16392
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

FS
type: SiteQuality
SIO_000300: 5.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.6e-2

DP
type: SiteQuality
SIO_000300: 1.691539e6

QD
type: SiteQuality
SIO_000300: 1.416e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.573e0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.501665616278023e-5
allele num: 66642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

QD
type: SiteQuality
SIO_000300: 1.271e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 1.69032e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
SIO_000300: 3.52e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 208
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2001
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500555205426008e-5
allele num: 66642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.04e-2

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.239e0

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.905e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.082e0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

DP
type: SiteQuality
SIO_000300: 1.690018e6

QD
type: SiteQuality
SIO_000300: 1.191e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 113
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.040816326530612e-4
allele num: 9800
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.117704637220115e-5
allele num: 16346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
type: SiteQuality
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MQRankSum
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 1.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.818e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

QD
type: SiteQuality
SIO_000300: 9.49e0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44102
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7993
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1999
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2155
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.503017021404341e-5
allele num: 66622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.169e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

FS
type: SiteQuality
SIO_000300: 1.804e0

DP
type: SiteQuality
SIO_000300: 1.688197e6

VQSLOD
type: SiteQuality
SIO_000300: 8.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.52e-1

QD
type: SiteQuality
SIO_000300: 1.047e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
all individuals: 330
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44045
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8001
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1999
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1812
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2155
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.835535976505139e-4
allele num: 16344
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.868e0

DP
type: SiteQuality
SIO_000300: 1.686758e6

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

QD
type: SiteQuality
SIO_000300: 1.392e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.93e-1

GenotypeQuality
all individuals: 1993
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 812
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 328
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1798
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7971
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43729
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.130456105934282e-5
allele num: 16312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.685033e6

QD
type: SiteQuality
SIO_000300: 1.697e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.819e-1

GenotypeQuality
all individuals: 7946
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43512
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1989
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1796
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501501501501501e-5
allele num: 66600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.11e-1

FS
type: SiteQuality
SIO_000300: 4.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

QD
type: SiteQuality
SIO_000300: 1.323e1

DP
type: SiteQuality
SIO_000300: 1.683763e6

VQSLOD
type: SiteQuality
SIO_000300: 7.22e-1

GenotypeQuality
all individuals: 113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7955
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 211
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43520
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1799
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1989
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16294
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501456412720339e-5
allele num: 66602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e-1

DP
type: SiteQuality
SIO_000300: 1.682805e6

MQRankSum
type: SiteQuality
SIO_000300: 7.63e-1

FS
type: SiteQuality
SIO_000300: 8.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.15e-1

QD
type: SiteQuality
SIO_000300: 1.35e1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1798
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7926
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43299
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1988
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.506128334534967e-5
allele num: 66576
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.983e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

DP
type: SiteQuality
SIO_000300: 1.68168e6

QD
type: SiteQuality
SIO_000300: 1.256e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.843e0

FS
type: SiteQuality
SIO_000300: 1.279e0

MQRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.98e-1

GenotypeQuality
all individuals: 96
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 274
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1988
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43299
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7926
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1798
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66576
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

MQRankSum
type: SiteQuality
SIO_000300: 8.400000000000001e-2

FS
type: SiteQuality
SIO_000300: 1.279e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.843e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.98e-1

DP
type: SiteQuality
SIO_000300: 1.68168e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

QD
type: SiteQuality
SIO_000300: 1.256e1

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43159
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7902
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1974
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1791
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2150
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 807
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66574
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.167509559639817e-5
allele num: 16214
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

ReadPosRankSum
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SIO_000300: 5.580000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.04e-1

BaseQRankSum
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SIO_000300: -5.55e0

DP
type: SiteQuality
SIO_000300: 1.679513e6

MQ
type: SiteQuality
SIO_000300: 5.98e1

QD
type: SiteQuality
SIO_000300: 1.31e1

FS
type: SiteQuality
SIO_000300: 3.01e0

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.099e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.167509559639817e-5
allele num: 16214
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66570
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.677754e6

InbreedingCoeff
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SIO_000300: -1.0e-4

ReadPosRankSum
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SIO_000300: 3.65e-1

FS
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SIO_000300: 3.01e0

ClippingRankSum
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SIO_000300: 3.65e-1

VQSLOD
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MQRankSum
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SIO_000300: -1.447e0

MQ
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SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

QD
type: SiteQuality
SIO_000300: 3.85e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.006343384541382e-5
allele num: 66526
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16200
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e0

FS
type: SiteQuality
SIO_000300: 7.8006e1

MQ
type: SiteQuality
SIO_000300: 5.766e1

MQRankSum
type: SiteQuality
SIO_000300: -6.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.197e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

QD
type: SiteQuality
SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: -2.907e1

DP
type: SiteQuality
SIO_000300: 1.680128e6

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2149
bin: 9.75e1
variant carriers: 8

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66550
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

South Asian
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allele count: 7
allele frequency: 4.320454264905567e-4
allele num: 16202
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.296e0

DP
type: SiteQuality
SIO_000300: 1.680879e6

VQSLOD
type: SiteQuality
SIO_000300: 2.67e0

MQRankSum
type: SiteQuality
SIO_000300: 2.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.02e-1

QD
type: SiteQuality
SIO_000300: 1.475e1

MQ
type: SiteQuality
SIO_000300: 5.951e1

FS
type: SiteQuality
SIO_000300: 1.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2149
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16202
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502629601803156e-5
allele num: 66550
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.296e0

MQRankSum
type: SiteQuality
SIO_000300: 2.75e-1

ClippingRankSum
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SIO_000300: -7.22e-1

InbreedingCoeff
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SIO_000300: 5.6e-3

VQSLOD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.02e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

QD
type: SiteQuality
SIO_000300: 1.475e1

FS
type: SiteQuality
SIO_000300: 1.42e0

DP
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SIO_000300: 1.680879e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502810255177181e-5
allele num: 66542
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 5
allele frequency: 3.084896347482725e-4
allele num: 16208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

FS
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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DP
type: SiteQuality
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QD
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MQ
type: SiteQuality
SIO_000300: 5.985e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
type: Population
allele count: 0
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allele num: 900
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.020408163265306e-4
allele num: 9800
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
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DP
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66416
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.156877231867996e-5
allele num: 16242
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.471e0

DP
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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MQ
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QD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66406
num of homozygotes: 0

East Asian
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South Asian
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QD
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ReadPosRankSum
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MQ
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ClippingRankSum
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MQRankSum
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DP
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FS
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 9.044044496698923e-5
allele num: 66342
num of homozygotes: 0

South Asian
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allele frequency: 3.641076277462355e-3
allele num: 16204
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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FS
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VQSLOD
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BaseQRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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QD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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Latino
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African
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66318
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South Asian
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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MQ
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FS
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MQRankSum
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QD
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 1
allele frequency: 6.183527083848628e-5
allele num: 16172
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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num of homozygotes: 0

Other
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FS
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SIO_000300: 1.96e0

BaseQRankSum
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QD
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ReadPosRankSum
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MQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64422
num of homozygotes: 0

Other
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South Asian
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Latino
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European (Finnish)
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African
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East Asian
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MQRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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FS
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BaseQRankSum
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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African
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Latino
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South Asian
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European (Non-Finnish)
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Other
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VQSLOD
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MQ
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QD
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DP
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InbreedingCoeff
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FS
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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South Asian
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Latino
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European (Non-Finnish)
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East Asian
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African
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QD
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MQ
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InbreedingCoeff
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ClippingRankSum
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SIO_000300: 5.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.483443e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
all individuals: 826
bin: 2.75e1
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GenotypeQuality
all individuals: 86
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.855311711011847e-5
allele num: 61788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7874
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

QD
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VQSLOD
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SIO_000300: -1.27e0

InbreedingCoeff
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SIO_000300: 1.0e-3

MQ
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SIO_000300: 5.871e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.62e-1

FS
type: SiteQuality
SIO_000300: 9.340000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.943e0

DP
type: SiteQuality
SIO_000300: 1.471863e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59080
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.607200257152041e-4
allele num: 6222
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.93e-1

QD
type: SiteQuality
SIO_000300: 1.797e1

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 3.535e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

DP
type: SiteQuality
SIO_000300: 1.37205e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59036
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.126887536623845e-4
allele num: 8874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6222
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7422
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9860
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.07e-1

QD
type: SiteQuality
SIO_000300: 1.259e1

DP
type: SiteQuality
SIO_000300: 1.369129e6

FS
type: SiteQuality
SIO_000300: 7.58e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

InbreedingCoeff
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SIO_000300: -2.0e-4

ClippingRankSum
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SIO_000300: 1.56e0

VQSLOD
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SIO_000300: -3.519e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.622e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1036
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6196
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9770
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58684
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.374e1

BaseQRankSum
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SIO_000300: 2.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.34e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.001e0

DP
type: SiteQuality
SIO_000300: 1.356157e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.135847342117219e-4
allele num: 8804
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54828
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.922e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.13e-1

BaseQRankSum
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ClippingRankSum
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VQSLOD
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

FS
type: SiteQuality
SIO_000300: 5.969e0

DP
type: SiteQuality
SIO_000300: 1.244357e6

MQRankSum
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.806077027288562e-5
allele num: 51670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8104
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: -8.31e-1

QD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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SIO_000300: -7.14e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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DP
type: SiteQuality
SIO_000300: 1.159699e6

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.39e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
all individuals: 872
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GenotypeQuality
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GenotypeQuality
all individuals: 447
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1656
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.055329469313931e-5
allele num: 48654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7574
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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Other
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MQRankSum
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MQ
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BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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African
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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DP
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FS
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MQRankSum
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MQ
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ClippingRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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South Asian
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Latino
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Other
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European (Finnish)
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ClippingRankSum
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MQ
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QD
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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num of homozygotes: 0

East Asian
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Latino
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Other
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European (Finnish)
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African
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South Asian
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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DP
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FS
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MQ
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MQRankSum
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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South Asian
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Latino
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East Asian
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Other
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European (Non-Finnish)
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FS
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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QD
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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Other
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East Asian
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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BaseQRankSum
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DP
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QD
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Other
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East Asian
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African
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South Asian
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Latino
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FS
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MQ
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ReadPosRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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European (Finnish)
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South Asian
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East Asian
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Latino
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African
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DP
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ReadPosRankSum
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MQ
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FS
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VQSLOD
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QD
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SIO_000300: 1.39e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.05e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

GenotypeQuality
all individuals: 2038
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2280
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4054
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 31096
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3704
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

FS
type: SiteQuality
SIO_000300: 6.2e-1

DP
type: SiteQuality
SIO_000300: 6.86559e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.05e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.39e1

GenotypeDepth
all individuals: 226
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1944
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4002
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.842524161455372e-4
allele num: 3518
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.186e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.77411e5

VQSLOD
type: SiteQuality
SIO_000300: -2.002e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.36e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

GenotypeDepth
all individuals: 173
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1941
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2742
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18241
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.219409282700422e-5
allele num: 23700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4184
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 312
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.84e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.363e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.603e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.16e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 6.11874e5

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2825
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variant carriers: 3

GenotypeQuality
all individuals: 1604
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variant carriers: 0

GenotypeQuality
all individuals: 4526
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variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.141327623126338e-4
allele num: 9340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10774
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8048
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.633880138553036e-5
allele num: 61204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

MQRankSum
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SIO_000300: -5.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.87e-1

FS
type: SiteQuality
SIO_000300: 2.095e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.447795e6

QD
type: SiteQuality
SIO_000300: 1.629e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.84e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1350
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GenotypeQuality
all individuals: 894
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2369
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4385
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
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GenotypeQuality
all individuals: 5522
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8092
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.621113380669844e-5
allele num: 61686
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.02e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.120000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.428e1

BaseQRankSum
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SIO_000300: -1.041e0

DP
type: SiteQuality
SIO_000300: 1.452841e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 4.334e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.19e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 361
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6179
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variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.604621309370989e-5
allele num: 62320
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10996
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.29e-1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.848e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 1.297e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.308e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.937e0

DP
type: SiteQuality
SIO_000300: 1.54022e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 5.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.775171065493646e-5
allele num: 10230
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.2e-2

InbreedingCoeff
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QD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.251e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.61e-1

DP
type: SiteQuality
SIO_000300: 1.611177e6

MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeDepth
all individuals: 557
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 177
bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11184
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.575944778894947e-5
allele num: 63454
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9530
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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SIO_000300: 1.611177e6

ReadPosRankSum
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FS
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VQSLOD
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MQRankSum
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InbreedingCoeff
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QD
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BaseQRankSum
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ClippingRankSum
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SIO_000300: 8.090000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563574957783476e-5
allele num: 63956
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10742
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.887e1

VQSLOD
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FS
type: SiteQuality
SIO_000300: 1.52e0

InbreedingCoeff
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SIO_000300: 4.0e-4

ReadPosRankSum
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SIO_000300: 8.61e-1

DP
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MQRankSum
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SIO_000300: 1.41e-1

ClippingRankSum
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SIO_000300: -3.29e-1

QD
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SIO_000300: 7.18e0

BaseQRankSum
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SIO_000300: 3.29e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.112162330387153e-5
allele num: 64264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9636
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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SIO_000300: 1.3e-1

FS
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SIO_000300: 2.053e0

BaseQRankSum
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SIO_000300: 1.46e0

ClippingRankSum
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SIO_000300: -2.09e-1

QD
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MQ
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SIO_000300: 6.0e1

VQSLOD
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SIO_000300: 1.13e0

InbreedingCoeff
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SIO_000300: -9.0e-4

DP
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SIO_000300: 1.645711e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.25e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 448
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64970
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.029548739360848e-5
allele num: 12454
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

FS
type: SiteQuality
SIO_000300: 1.923e0

DP
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ClippingRankSum
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InbreedingCoeff
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MQ
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SIO_000300: 6.0e1

MQRankSum
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ReadPosRankSum
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SIO_000300: 1.22e0

QD
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SIO_000300: 1.047e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.381e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.536428725071444e-5
allele num: 65086
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.844367743959836e-5
allele num: 12748
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: 5.0e-4

VQSLOD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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QD
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FS
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DP
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SIO_000300: 1.685827e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528818223513224e-5
allele num: 65410
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
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MQRankSum
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ReadPosRankSum
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FS
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 8.07e0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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