9-131885297-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885297
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885297
    reference: chr 9
allele count: 34
allele frequency: 3.498590273919038e-4
allele num: 97182
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.199-34T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.130-34T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.130-34T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-87-34T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.130-34T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2408T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.130-34T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.148-34T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.25-34T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.130-34T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.25-34T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.130-34T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2408T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.25-34T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.130-34T>C
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/9-131885304-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885304
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885304
    reference: chr 9
allele count: 31
allele frequency: 2.934939029008559e-4
allele num: 105624
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.130-27A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.130-27A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.130-27A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.130-27A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.148-27A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.130-27A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2415A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.130-27A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2415A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.130-27A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.25-27A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.25-27A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.25-27A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-87-27A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.199-27A>C
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/9-131885310-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885310
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885310
    reference: chr 9
allele count: 12
allele frequency: 1.035804302040534e-4
allele num: 115852
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.25-21A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.130-21A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.25-21A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.130-21A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.130-21A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-87-21A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.25-21A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2421A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.130-21A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2421A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.130-21A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.130-21A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.130-21A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.199-21A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.148-21A>C
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4069
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

9-131885316-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885316
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885316
    reference: chr 9
allele count: 1
allele frequency: 8.405197774303629e-6
allele num: 118974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.130-15C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.130-15C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.130-15C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2427C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.130-15C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-87-15C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.130-15C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.25-15C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.199-15C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.130-15C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.148-15C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2427C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.25-15C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.25-15C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.130-15C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6846
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

9-131885318-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885318
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885318
    reference: chr 9
allele count: 7
allele frequency: 5.877512636652169e-5
allele num: 119098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2429C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.148-13C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2429C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.130-13C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.25-13C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.25-13C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.130-13C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.130-13C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.130-13C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.130-13C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.199-13C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.130-13C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.25-13C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-87-13C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.130-13C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6845
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5261
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5470
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

9-131885321-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885321
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885321
    reference: chr 9
allele count: 1
allele frequency: 8.38447865311735e-6
allele num: 119268
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.130-10T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.130-10T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.130-10T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2432T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.130-10T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.199-10T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.25-10T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2432T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.130-10T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-87-10T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.25-10T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.130-10T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.25-10T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.148-10T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.130-10T>C
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5014
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

9-131885324-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885324
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885324
    reference: chr 9
allele count: 1
allele frequency: 8.375209380234507e-6
allele num: 119400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.25-7T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.25-7T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.25-7T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-87-7T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.130-7T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.148-7T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.130-7T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.130-7T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2435T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.130-7T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.130-7T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2435T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.130-7T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.130-7T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.199-7T>G
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.130-7T>G
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

9-131885335-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885335
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885335
    reference: chr 9
allele count: 1
allele frequency: 8.346827370916315e-6
allele num: 119806
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.134A>G
  hgvsp: ENSP00000347109.3:p.Tyr45Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.134A>G
  hgvsp: ENSP00000406997.1:p.Tyr45Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.29A>G
  hgvsp: ENSP00000403542.1:p.Tyr10Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.134A>G
  hgvsp: ENSP00000337448.1:p.Tyr45Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.134A>G
  hgvsp: ENSP00000377036.2:p.Tyr45Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.29A>G
  hgvsp: ENSP00000393092.1:p.Tyr10Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.152A>G
  hgvsp: ENSP00000335200.6:p.Tyr51Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.134A>G
  hgvsp: ENSP00000351885.4:p.Tyr45Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-83A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.203A>G
  hgvsp: ENSP00000400314.1:p.Tyr68Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2446A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.29A>G
  hgvsp: ENSP00000393796.1:p.Tyr10Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2446A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.134A>G
  hgvsp: ENSP00000394338.2:p.Tyr45Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.134A>G
  hgvsp: ENSP00000395499.1:p.Tyr45Cys
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr45Cys
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

9-131885336-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885336
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885336
    reference: chr 9
allele count: 5
allele frequency: 4.172856403665437e-5
allele num: 119822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.135C>T
  hgvsp: ENST00000358994.4:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.135C>T
  hgvsp: ENST00000393370.2:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.30C>T
  hgvsp: ENST00000440346.1:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.204C>T
  hgvsp: ENST00000417504.1:c.204C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.135C>T
  hgvsp: ENST00000337738.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2447C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.135C>T
  hgvsp: ENST00000452489.2:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2447C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.135C>T
  hgvsp: ENST00000445241.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-82C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.135C>T
  hgvsp: ENST00000355007.3:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.30C>T
  hgvsp: ENST00000453358.1:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.153C>T
  hgvsp: ENST00000348141.5:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.135C>T
  hgvsp: ENST00000455292.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.30C>T
  hgvsp: ENST00000417728.1:c.30C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4832
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr45Tyr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

9-131885337-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885337
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885337
    reference: chr 9
allele count: 1
allele frequency: 8.343345347750633e-6
allele num: 119856
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2448G>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.31G>T
  hgvsp: ENSP00000393092.1:p.Ala11Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.136G>T
  hgvsp: ENSP00000351885.4:p.Ala46Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.31G>T
  hgvsp: ENSP00000403542.1:p.Ala11Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.136G>T
  hgvsp: ENSP00000377036.2:p.Ala46Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.136G>T
  hgvsp: ENSP00000337448.1:p.Ala46Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.136G>T
  hgvsp: ENSP00000406997.1:p.Ala46Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.154G>T
  hgvsp: ENSP00000335200.6:p.Ala52Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.136G>T
  hgvsp: ENSP00000394338.2:p.Ala46Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2448G>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.31G>T
  hgvsp: ENSP00000393796.1:p.Ala11Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.136G>T
  hgvsp: ENSP00000347109.3:p.Ala46Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-81G>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.136G>T
  hgvsp: ENSP00000395499.1:p.Ala46Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.205G>T
  hgvsp: ENSP00000400314.1:p.Ala69Ser
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6848
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala46Ser
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

9-131885338-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885338
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885338
    reference: chr 9
allele count: 1
allele frequency: 8.340840089413805e-6
allele num: 119892
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.137C>T
  hgvsp: ENSP00000347109.3:p.Ala46Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.137C>T
  hgvsp: ENSP00000406997.1:p.Ala46Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2449C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.32C>T
  hgvsp: ENSP00000393092.1:p.Ala11Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-80C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.155C>T
  hgvsp: ENSP00000335200.6:p.Ala52Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.137C>T
  hgvsp: ENSP00000377036.2:p.Ala46Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.32C>T
  hgvsp: ENSP00000393796.1:p.Ala11Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2449C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.137C>T
  hgvsp: ENSP00000394338.2:p.Ala46Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.137C>T
  hgvsp: ENSP00000351885.4:p.Ala46Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.137C>T
  hgvsp: ENSP00000395499.1:p.Ala46Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.137C>T
  hgvsp: ENSP00000337448.1:p.Ala46Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.32C>T
  hgvsp: ENSP00000403542.1:p.Ala11Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.206C>T
  hgvsp: ENSP00000400314.1:p.Ala69Val
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala46Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

9-131885342-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885342
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885342
    reference: chr 9
allele count: 1
allele frequency: 8.333611120370679e-6
allele num: 119996
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.141C>T
  hgvsp: ENST00000337738.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2453C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.141C>T
  hgvsp: ENST00000358994.4:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.141C>T
  hgvsp: ENST00000355007.3:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.210C>T
  hgvsp: ENST00000417504.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.36C>T
  hgvsp: ENST00000453358.1:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-76C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.159C>T
  hgvsp: ENST00000348141.5:c.159C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2453C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.141C>T
  hgvsp: ENST00000393370.2:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.36C>T
  hgvsp: ENST00000440346.1:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.36C>T
  hgvsp: ENST00000417728.1:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.141C>T
  hgvsp: ENST00000445241.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.141C>T
  hgvsp: ENST00000455292.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.141C>T
  hgvsp: ENST00000452489.2:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5265
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp47Asp
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

9-131885345-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885345
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885345
    reference: chr 9
allele count: 5
allele frequency: 4.165278240586471e-5
allele num: 120040
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.213C>T
  hgvsp: ENST00000417504.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.144C>T
  hgvsp: ENST00000445241.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.144C>T
  hgvsp: ENST00000452489.2:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2456C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.39C>T
  hgvsp: ENST00000440346.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.162C>T
  hgvsp: ENST00000348141.5:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.39C>T
  hgvsp: ENST00000453358.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.144C>T
  hgvsp: ENST00000355007.3:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.144C>T
  hgvsp: ENST00000358994.4:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.39C>T
  hgvsp: ENST00000417728.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.144C>T
  hgvsp: ENST00000393370.2:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.144C>T
  hgvsp: ENST00000337738.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.144C>T
  hgvsp: ENST00000455292.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-73C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2456C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr48Tyr
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

9-131885348-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885348
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885348
    reference: chr 9
allele count: 3
allele frequency: 2.49804319949373e-5
allele num: 120094
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.216C>T
  hgvsp: ENST00000417504.1:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.147C>T
  hgvsp: ENST00000337738.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.147C>T
  hgvsp: ENST00000358994.4:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.147C>T
  hgvsp: ENST00000355007.3:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2459C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.147C>T
  hgvsp: ENST00000445241.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.147C>T
  hgvsp: ENST00000455292.1:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.147C>T
  hgvsp: ENST00000393370.2:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.165C>T
  hgvsp: ENST00000348141.5:c.165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.42C>T
  hgvsp: ENST00000417728.1:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.42C>T
  hgvsp: ENST00000453358.1:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.147C>T
  hgvsp: ENST00000452489.2:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.42C>T
  hgvsp: ENST00000440346.1:c.42C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2459C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5289
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5264
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile49Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

9-131885355-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885355
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885355
    reference: chr 9
allele count: 1
allele frequency: 8.318221896887321e-6
allele num: 120218
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2466A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.49A>G
  hgvsp: ENSP00000403542.1:p.Ile17Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.172A>G
  hgvsp: ENSP00000335200.6:p.Ile58Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2466A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.154A>G
  hgvsp: ENSP00000377036.2:p.Ile52Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.223A>G
  hgvsp: ENSP00000400314.1:p.Ile75Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.154A>G
  hgvsp: ENSP00000406997.1:p.Ile52Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-63A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.154A>G
  hgvsp: ENSP00000347109.3:p.Ile52Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.154A>G
  hgvsp: ENSP00000337448.1:p.Ile52Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.154A>G
  hgvsp: ENSP00000394338.2:p.Ile52Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.49A>G
  hgvsp: ENSP00000393092.1:p.Ile17Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.154A>G
  hgvsp: ENSP00000395499.1:p.Ile52Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.154A>G
  hgvsp: ENSP00000351885.4:p.Ile52Val
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.49A>G
  hgvsp: ENSP00000393796.1:p.Ile17Val
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6846
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4117
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile52Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS

9-131885358-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885358
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885358
    reference: chr 9
allele count: 4
allele frequency: 3.326513979675e-5
allele num: 120246
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2469C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2469C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.157C>T
  hgvsp: ENSP00000351885.4:p.Leu53Phe
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.175C>T
  hgvsp: ENSP00000335200.6:p.Leu59Phe
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.52C>T
  hgvsp: ENSP00000393092.1:p.Leu18Phe
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.157C>T
  hgvsp: ENSP00000394338.2:p.Leu53Phe
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.157C>T
  hgvsp: ENSP00000337448.1:p.Leu53Phe
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.157C>T
  hgvsp: ENSP00000406997.1:p.Leu53Phe
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.52C>T
  hgvsp: ENSP00000403542.1:p.Leu18Phe
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.52C>T
  hgvsp: ENSP00000393796.1:p.Leu18Phe
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.157C>T
  hgvsp: ENSP00000377036.2:p.Leu53Phe
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.157C>T
  hgvsp: ENSP00000395499.1:p.Leu53Phe
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-60C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.226C>T
  hgvsp: ENSP00000400314.1:p.Leu76Phe
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.157C>T
  hgvsp: ENSP00000347109.3:p.Leu53Phe
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6846
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu53Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD

9-131885362-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885362
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885362
    reference: chr 9
allele count: 1
allele frequency: 8.315731701232391e-6
allele num: 120254
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.56C>T
  hgvsp: ENSP00000393092.1:p.Thr19Ile
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.56C>T
  hgvsp: ENSP00000403542.1:p.Thr19Ile
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.161C>T
  hgvsp: ENSP00000337448.1:p.Thr54Ile
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.56C>T
  hgvsp: ENSP00000393796.1:p.Thr19Ile
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.230C>T
  hgvsp: ENSP00000400314.1:p.Thr77Ile
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.161C>T
  hgvsp: ENSP00000351885.4:p.Thr54Ile
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.161C>T
  hgvsp: ENSP00000406997.1:p.Thr54Ile
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.161C>T
  hgvsp: ENSP00000394338.2:p.Thr54Ile
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.161C>T
  hgvsp: ENSP00000377036.2:p.Thr54Ile
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-56C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.161C>T
  hgvsp: ENSP00000395499.1:p.Thr54Ile
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2473C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.161C>T
  hgvsp: ENSP00000347109.3:p.Thr54Ile
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.179C>T
  hgvsp: ENSP00000335200.6:p.Thr60Ile
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2473C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6846
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr54Ile
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

9-131885369-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885369
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885369
    reference: chr 9
allele count: 1
allele frequency: 8.311999202048076e-6
allele num: 120308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.63C>T
  hgvsp: ENST00000453358.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.168C>T
  hgvsp: ENST00000445241.1:c.168C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.237C>T
  hgvsp: ENST00000417504.1:c.237C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2480C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2480C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.168C>T
  hgvsp: ENST00000337738.1:c.168C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-49C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.63C>T
  hgvsp: ENST00000417728.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.186C>T
  hgvsp: ENST00000348141.5:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.63C>T
  hgvsp: ENST00000440346.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.168C>T
  hgvsp: ENST00000358994.4:c.168C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.168C>T
  hgvsp: ENST00000393370.2:c.168C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.168C>T
  hgvsp: ENST00000355007.3:c.168C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.168C>T
  hgvsp: ENST00000452489.2:c.168C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.168C>T
  hgvsp: ENST00000455292.1:c.168C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6847
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn56Asn
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP

9-131885370-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885370
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885370
    reference: chr 9
allele count: 2
allele frequency: 1.662565671344018e-5
allele num: 120296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.169G>A
  hgvsp: ENSP00000337448.1:p.Glu57Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.64G>A
  hgvsp: ENSP00000403542.1:p.Glu22Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.187G>A
  hgvsp: ENSP00000335200.6:p.Glu63Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2481G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.169G>A
  hgvsp: ENSP00000394338.2:p.Glu57Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.238G>A
  hgvsp: ENSP00000400314.1:p.Glu80Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.169G>A
  hgvsp: ENSP00000406997.1:p.Glu57Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.64G>A
  hgvsp: ENSP00000393796.1:p.Glu22Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.169G>A
  hgvsp: ENSP00000351885.4:p.Glu57Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.169G>A
  hgvsp: ENSP00000377036.2:p.Glu57Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.64G>A
  hgvsp: ENSP00000393092.1:p.Glu22Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-48G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.169G>A
  hgvsp: ENSP00000395499.1:p.Glu57Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.169G>A
  hgvsp: ENSP00000347109.3:p.Glu57Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2481G>A
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5354
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu57Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

9-131885374-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885374
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885374
    reference: chr 9
allele count: 1
allele frequency: 8.31255195344971e-6
allele num: 120300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.173G>A
  hgvsp: ENSP00000337448.1:p.Gly58Asp
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.173G>A
  hgvsp: ENSP00000406997.1:p.Gly58Asp
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.173G>A
  hgvsp: ENSP00000347109.3:p.Gly58Asp
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.173G>A
  hgvsp: ENSP00000394338.2:p.Gly58Asp
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.242G>A
  hgvsp: ENSP00000400314.1:p.Gly81Asp
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.173G>A
  hgvsp: ENSP00000351885.4:p.Gly58Asp
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.191G>A
  hgvsp: ENSP00000335200.6:p.Gly64Asp
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.68G>A
  hgvsp: ENSP00000393796.1:p.Gly23Asp
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.173G>A
  hgvsp: ENSP00000377036.2:p.Gly58Asp
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2485G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.173G>A
  hgvsp: ENSP00000395499.1:p.Gly58Asp
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.68G>A
  hgvsp: ENSP00000403542.1:p.Gly23Asp
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.68G>A
  hgvsp: ENSP00000393092.1:p.Gly23Asp
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-44G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2485G>A
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6848
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly58Asp
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

9-131885396-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885396
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885396
    reference: chr 9
allele count: 1
allele frequency: 8.317114959162966e-6
allele num: 120234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.90C>T
  hgvsp: ENST00000417728.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.90C>T
  hgvsp: ENST00000453358.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.213C>T
  hgvsp: ENST00000348141.5:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.195C>T
  hgvsp: ENST00000445241.1:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.90C>T
  hgvsp: ENST00000440346.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.195C>T
  hgvsp: ENST00000337738.1:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2507C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.195C>T
  hgvsp: ENST00000393370.2:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.195C>T
  hgvsp: ENST00000358994.4:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2507C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.195C>T
  hgvsp: ENST00000452489.2:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.264C>T
  hgvsp: ENST00000417504.1:c.264C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.195C>T
  hgvsp: ENST00000455292.1:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.195C>T
  hgvsp: ENST00000355007.3:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-22C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6848
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr65Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

9-131885396-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885396
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885396
    reference: chr 9
allele count: 2
allele frequency: 1.663422991832593e-5
allele num: 120234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.264C>G
  hgvsp: ENST00000417504.1:c.264C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.195C>G
  hgvsp: ENST00000455292.1:c.195C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.90C>G
  hgvsp: ENST00000453358.1:c.90C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2507C>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.90C>G
  hgvsp: ENST00000440346.1:c.90C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.213C>G
  hgvsp: ENST00000348141.5:c.213C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.195C>G
  hgvsp: ENST00000393370.2:c.195C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.195C>G
  hgvsp: ENST00000358994.4:c.195C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-22C>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.195C>G
  hgvsp: ENST00000337738.1:c.195C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.195C>G
  hgvsp: ENST00000355007.3:c.195C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.195C>G
  hgvsp: ENST00000452489.2:c.195C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2507C>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.90C>G
  hgvsp: ENST00000417728.1:c.90C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.195C>G
  hgvsp: ENST00000445241.1:c.195C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6848
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5848
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr65Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

9-131885399-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885399
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885399
    reference: chr 9
allele count: 2
allele frequency: 1.664115023630433e-5
allele num: 120184
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.198C>T
  hgvsp: ENST00000358994.4:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.216C>T
  hgvsp: ENST00000348141.5:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.198C>T
  hgvsp: ENST00000455292.1:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.93C>T
  hgvsp: ENST00000417728.1:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.198C>T
  hgvsp: ENST00000445241.1:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.198C>T
  hgvsp: ENST00000393370.2:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.198C>T
  hgvsp: ENST00000355007.3:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.198C>T
  hgvsp: ENST00000337738.1:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.93C>T
  hgvsp: ENST00000440346.1:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.93C>T
  hgvsp: ENST00000453358.1:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2510C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2510C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.198C>T
  hgvsp: ENST00000452489.2:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.267C>T
  hgvsp: ENST00000417504.1:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-19C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6848
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe66Phe
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

9-131885414-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885414
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885414
    reference: chr 9
allele count: 145
allele frequency: 1.208514610524912e-3
allele num: 119982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.231C>T
  hgvsp: ENST00000348141.5:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.213C>T
  hgvsp: ENST00000337738.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.213C>T
  hgvsp: ENST00000455292.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2525C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.108C>T
  hgvsp: ENST00000453358.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.213C>T
  hgvsp: ENST00000393370.2:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-4C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.108C>T
  hgvsp: ENST00000440346.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.213C>T
  hgvsp: ENST00000355007.3:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.213C>T
  hgvsp: ENST00000358994.4:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.213C>T
  hgvsp: ENST00000445241.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.108C>T
  hgvsp: ENST00000417728.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.282C>T
  hgvsp: ENST00000417504.1:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.213C>T
  hgvsp: ENST00000452489.2:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2525C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5264
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 9.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6462
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5262
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser71Ser
num of homozygotes: 1
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

9-131885415-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885415
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885415
    reference: chr 9
allele count: 2
allele frequency: 1.667000066680003e-5
allele num: 119976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.109G>A
  hgvsp: ENSP00000403542.1:p.Glu37Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.109G>A
  hgvsp: ENSP00000393092.1:p.Glu37Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.214G>A
  hgvsp: ENSP00000347109.3:p.Glu72Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2526G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.214G>A
  hgvsp: ENSP00000337448.1:p.Glu72Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.232G>A
  hgvsp: ENSP00000335200.6:p.Glu78Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.214G>A
  hgvsp: ENSP00000394338.2:p.Glu72Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.214G>A
  hgvsp: ENSP00000406997.1:p.Glu72Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.214G>A
  hgvsp: ENSP00000351885.4:p.Glu72Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.283G>A
  hgvsp: ENSP00000400314.1:p.Glu95Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.109G>A
  hgvsp: ENSP00000393796.1:p.Glu37Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.214G>A
  hgvsp: ENSP00000377036.2:p.Glu72Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2526G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.214G>A
  hgvsp: ENSP00000395499.1:p.Glu72Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-3G>A
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4835
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu72Lys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum

9-131885415-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885415
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885415
    reference: chr 9
allele count: 2
allele frequency: 1.667000066680003e-5
allele num: 119976
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.214G>C
  hgvsp: ENSP00000406997.1:p.Glu72Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.109G>C
  hgvsp: ENSP00000393796.1:p.Glu37Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2526G>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.214G>C
  hgvsp: ENSP00000394338.2:p.Glu72Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2526G>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.109G>C
  hgvsp: ENSP00000393092.1:p.Glu37Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.214G>C
  hgvsp: ENSP00000377036.2:p.Glu72Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.283G>C
  hgvsp: ENSP00000400314.1:p.Glu95Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.232G>C
  hgvsp: ENSP00000335200.6:p.Glu78Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.214G>C
  hgvsp: ENSP00000351885.4:p.Glu72Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.214G>C
  hgvsp: ENSP00000337448.1:p.Glu72Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.109G>C
  hgvsp: ENSP00000403542.1:p.Glu37Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.214G>C
  hgvsp: ENSP00000347109.3:p.Glu72Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.214G>C
  hgvsp: ENSP00000395499.1:p.Glu72Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-3G>C
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6473
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu72Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

9-131885421-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885421
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885421
    reference: chr 9
allele count: 1
allele frequency: 8.341814177747376e-6
allele num: 119878
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+4G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+4G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+4G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+4G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+4G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+4G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+4G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+4G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+4G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2532G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+4G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+4G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+4G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2532G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+4G>A
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.216+4G>A
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

9-131885423-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885423
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885423
    reference: chr 9
allele count: 2
allele frequency: 1.668696914579405e-5
allele num: 119854
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+6C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+6C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+6C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+6C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+6C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2534C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+6C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+6C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+6C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+6C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2534C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+6C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+6C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+6C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+6C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6477
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6853
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.216+6C>T
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP

9-131885424-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885424
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885424
    reference: chr 9
allele count: 1
allele frequency: 8.343763037129745e-6
allele num: 119850
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+7C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+7C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+7C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+7C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+7C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+7C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2535C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2535C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+7C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+7C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+7C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+7C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+7C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+7C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+7C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.216+7C>T
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

9-131885425-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885425
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885425
    reference: chr 9
allele count: 2
allele frequency: 1.66908684258842e-5
allele num: 119826
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2536C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+8C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+8C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+8C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2536C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+8C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+8C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+8C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+8C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+8C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+8C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+8C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+8C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+8C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+8C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5173
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.216+8C>T
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

9-131885426-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885426
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885426
    reference: chr 9
allele count: 1
allele frequency: 8.34599142032082e-6
allele num: 119818
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+9A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+9A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+9A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+9A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+9A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+9A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+9A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+9A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2537A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+9A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+9A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2537A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+9A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+9A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+9A>G
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6852
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5243
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

9-131885428-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885428
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885428
    reference: chr 9
allele count: 1
allele frequency: 8.347384764353328e-6
allele num: 119798
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+11G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+11G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+11G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2539G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+11G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2539G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+11G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+11G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+11G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+11G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+11G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+11G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+11G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+11G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+11G>A
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

9-131885434-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885434
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885434
    reference: chr 9
allele count: 1
allele frequency: 8.355754608198667e-6
allele num: 119678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+17G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+17G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+17G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+17G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+17G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+17G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+17G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2545G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2545G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+17G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+17G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+17G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+17G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+17G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+17G>A
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6851
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6474
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

9-131885436-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885436
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885436
    reference: chr 9
allele count: 2
allele frequency: 1.671541997492687e-5
allele num: 119650
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+19T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+19T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+19T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+19T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2547T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2547T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+19T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+19T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+19T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+19T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+19T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+19T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+19T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+19T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+19T>C
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

9-131885438-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885438
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885438
    reference: chr 9
allele count: 2
allele frequency: 1.672744304305644e-5
allele num: 119564
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+21C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+21C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+21C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+21C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+21C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+21C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2549C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+21C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+21C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+21C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+21C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2549C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+21C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+21C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+21C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6849
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5273
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/9-131885441-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885441
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885441
    reference: chr 9
allele count: 2
allele frequency: 1.672968180145214e-5
allele num: 119548
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+24C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+24C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2552C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+24C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+24C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+24C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2552C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+24C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+24C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+24C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+24C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+24C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+24C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+24C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+24C>A
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/9-131885447-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885447
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885447
    reference: chr 9
allele count: 6
allele frequency: 5.024199896166536e-5
allele num: 119422
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+30C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+30C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+30C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+30C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+30C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+30C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+30C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+30C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+30C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2558C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2558C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+30C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+30C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+30C>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+30C>A
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6843
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6444
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4116
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

9-131885448-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885448
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885448
    reference: chr 9
allele count: 3
allele frequency: 2.511805485783181e-5
allele num: 119436
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+31C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+31C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2559C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+31C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+31C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+31C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+31C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+31C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2559C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+31C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+31C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+31C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+31C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+31C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+31C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6257
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

9-131885456-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885456
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885456
    reference: chr 9
allele count: 15
allele frequency: 1.257292295312814e-4
allele num: 119304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+39A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+39A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+39A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2567A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+39A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+39A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+39A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+39A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+39A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+39A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+39A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2567A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+39A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+39A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+39A>G
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6256
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

9-131885463-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885463
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885463
    reference: chr 9
allele count: 21
allele frequency: 1.763046544428773e-4
allele num: 119112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+46T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+46T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+46T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+46T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+46T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+46T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+46T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+46T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+46T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2574T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+46T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2574T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+46T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+46T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+46T>C
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3119
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

9-131885464-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131885464
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131885464
    reference: chr 9
allele count: 1
allele frequency: 8.400678774845007e-6
allele num: 119038
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+2575C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.216+47C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.216+47C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.234+47C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.129+2575C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.111+47C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.216+47C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.216+47C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.216+47C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.111+47C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.-1+47C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.285+47C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.216+47C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.111+47C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.216+47C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4136
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ

9-131890201-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890201
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890201
    reference: chr 9
allele count: 1
allele frequency: 3.924030764401193e-5
allele num: 25484
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-1063T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.217-42T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-1063T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.217-42T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-1063T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3600T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-1063T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.1-42T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-1063T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-1063T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7312T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-1063T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.217-42T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-1063T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.217-42T>C
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30787
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum

9-131890215-G-GTTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890215
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890219
    reference: chr 9
allele count: 1
allele frequency: 3.867275117951891e-5
allele num: 25858
alternate allele: GTTGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-1048_235-1045dupTTGT
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3585_217-3582dupTTGT
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.217-27_217-24dupTTGT
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-1048_112-1045dupTTGT
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.217-27_217-24dupTTGT
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-1048_217-1045dupTTGT
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.1-27_1-24dupTTGT
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7327_129+7330dupTTGT
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.217-27_217-24dupTTGT
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-1048_130-1045dupTTGT
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-1048_112-1045dupTTGT
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.217-27_217-24dupTTGT
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-1048_286-1045dupTTGT
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-1048_112-1045dupTTGT
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-1048_217-1045dupTTGT
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27632
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

9-131890221-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890221
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890221
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 26258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-1043A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7332A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-1043A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-1043A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-1043A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.217-22A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3580A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.217-22A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.217-22A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-1043A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-1043A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-1043A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-1043A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.1-22A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.217-22A>G
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21293
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

9-131890228-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890228
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890228
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 26844
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-1036T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-1036T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.217-15T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.217-15T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.1-15T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-1036T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-1036T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7339T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-1036T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.217-15T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-1036T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-1036T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3573T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.217-15T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-1036T>C
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 25325
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21081
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

9-131890232-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890232
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890232
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 27314
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-1032T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7343T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.217-11T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-1032T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3569T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-1032T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.217-11T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-1032T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.217-11T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-1032T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-1032T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-1032T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.1-11T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.217-11T>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-1032T>G
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19071
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27215
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

9-131890266-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890266
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890266
    reference: chr 9
allele count: 15
allele frequency: 4.170373665480427e-4
allele num: 35968
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-998A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.240A>G
  hgvsp: ENST00000452489.2:c.240A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3535A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-998A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-998A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-998A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.240A>G
  hgvsp: ENST00000455292.1:c.240A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.24A>G
  hgvsp: ENST00000414331.1:c.24A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.240A>G
  hgvsp: ENST00000445241.1:c.240A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.240A>G
  hgvsp: ENST00000337738.1:c.240A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7377A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-998A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-998A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-998A>G
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-998A>G
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7372
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu80Glu
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/9-131890267-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890267
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890267
    reference: chr 9
allele count: 1
allele frequency: 2.747403703500192e-5
allele num: 36398
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-997A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.241A>C
  hgvsp: ENSP00000406997.1:p.Lys81Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7378A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.25A>C
  hgvsp: ENSP00000399069.1:p.Lys9Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.241A>C
  hgvsp: ENSP00000395499.1:p.Lys81Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-997A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.241A>C
  hgvsp: ENSP00000394338.2:p.Lys81Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.241A>C
  hgvsp: ENSP00000337448.1:p.Lys81Gln
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3534A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-997A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-997A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-997A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-997A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-997A>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-997A>C
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2790
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35083
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7161
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys81Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

9-131890282-AAGC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890282
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890279
    reference: chr 9
allele count: 1
allele frequency: 2.450499901980004e-5
allele num: 40808
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3516_217-3514delCAG
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-979_217-977delCAG
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-979_112-977delCAG
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-979_112-977delCAG
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.43_45delCAG
  hgvsp: ENSP00000399069.1:p.Gln15del
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7396_129+7398delCAG
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-979_286-977delCAG
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-979_217-977delCAG
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.259_261delCAG
  hgvsp: ENSP00000395499.1:p.Gln87del
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.259_261delCAG
  hgvsp: ENSP00000406997.1:p.Gln87del
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-979_112-977delCAG
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.259_261delCAG
  hgvsp: ENSP00000337448.1:p.Gln87del
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.259_261delCAG
  hgvsp: ENSP00000394338.2:p.Gln87del
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-979_130-977delCAG
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-979_235-977delCAG
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln87del
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: AAGC
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

9-131890287-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890287
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890287
    reference: chr 9
allele count: 26
allele frequency: 6.23680675494147e-4
allele num: 41688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.261G>A
  hgvsp: ENST00000452489.2:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-977G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-977G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3514G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-977G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7398G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.261G>A
  hgvsp: ENST00000445241.1:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-977G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-977G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-977G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.261G>A
  hgvsp: ENST00000337738.1:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.45G>A
  hgvsp: ENST00000414331.1:c.45G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.261G>A
  hgvsp: ENST00000455292.1:c.261G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-977G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-977G>A
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6785
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34400
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Gln87Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD

9-131890288-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890288
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890288
    reference: chr 9
allele count: 1
allele frequency: 2.388915432393693e-5
allele num: 41860
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.46A>T
  hgvsp: ENSP00000399069.1:p.Ser16Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.262A>T
  hgvsp: ENSP00000337448.1:p.Ser88Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.262A>T
  hgvsp: ENSP00000406997.1:p.Ser88Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-976A>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3513A>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-976A>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-976A>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.262A>T
  hgvsp: ENSP00000395499.1:p.Ser88Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.262A>T
  hgvsp: ENSP00000394338.2:p.Ser88Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-976A>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-976A>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-976A>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-976A>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-976A>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7399A>T
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34382
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5182
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser88Cys
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

9-131890290-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890290
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890290
    reference: chr 9
allele count: 1
allele frequency: 2.388230798624379e-5
allele num: 41872
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7401T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.264T>C
  hgvsp: ENST00000452489.2:c.264T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-974T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.264T>C
  hgvsp: ENST00000337738.1:c.264T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-974T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.48T>C
  hgvsp: ENST00000414331.1:c.48T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3511T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-974T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-974T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.264T>C
  hgvsp: ENST00000455292.1:c.264T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.264T>C
  hgvsp: ENST00000445241.1:c.264T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-974T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-974T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-974T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-974T>C
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser88Ser
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

9-131890299-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890299
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890299
    reference: chr 9
allele count: 2
allele frequency: 4.708097928436911e-5
allele num: 42480
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.273C>T
  hgvsp: ENST00000452489.2:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.273C>T
  hgvsp: ENST00000445241.1:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3502C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-965C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.273C>T
  hgvsp: ENST00000455292.1:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-965C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.273C>T
  hgvsp: ENST00000337738.1:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-965C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-965C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-965C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-965C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7410C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-965C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-965C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.57C>T
  hgvsp: ENST00000414331.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33618
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys91Cys
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

9-131890303-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890303
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890303
    reference: chr 9
allele count: 3
allele frequency: 7.018528916339136e-5
allele num: 42744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.277G>A
  hgvsp: ENSP00000337448.1:p.Glu93Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-961G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.277G>A
  hgvsp: ENSP00000395499.1:p.Glu93Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-961G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.277G>A
  hgvsp: ENSP00000406997.1:p.Glu93Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-961G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.61G>A
  hgvsp: ENSP00000399069.1:p.Glu21Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7414G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-961G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-961G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3498G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-961G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-961G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.277G>A
  hgvsp: ENSP00000394338.2:p.Glu93Lys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-961G>A
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Glu93Lys
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

9-131890313-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890313
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890313
    reference: chr 9
allele count: 2
allele frequency: 4.813014390913029e-5
allele num: 41554
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.287C>T
  hgvsp: ENSP00000337448.1:p.Pro96Leu
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-951C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.287C>T
  hgvsp: ENSP00000394338.2:p.Pro96Leu
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3488C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.71C>T
  hgvsp: ENSP00000399069.1:p.Pro24Leu
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7424C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.287C>T
  hgvsp: ENSP00000406997.1:p.Pro96Leu
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-951C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-951C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-951C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.287C>T
  hgvsp: ENSP00000395499.1:p.Pro96Leu
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-951C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-951C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-951C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-951C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4528
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro96Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

9-131890316-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890316
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890316
    reference: chr 9
allele count: 1
allele frequency: 2.408129846361316e-5
allele num: 41526
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.74T>C
  hgvsp: ENSP00000399069.1:p.Leu25Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-948T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3485T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.290T>C
  hgvsp: ENSP00000337448.1:p.Leu97Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-948T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.290T>C
  hgvsp: ENSP00000406997.1:p.Leu97Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-948T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7427T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-948T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.290T>C
  hgvsp: ENSP00000395499.1:p.Leu97Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-948T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.290T>C
  hgvsp: ENSP00000394338.2:p.Leu97Ser
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-948T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-948T>C
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-948T>C
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7339
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5825
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu97Ser
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/9-131890317-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890317
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890318
    reference: chr 9
allele count: 2
allele frequency: 4.863813229571985e-5
allele num: 41120
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.79dupC
  hgvsp: ENSP00000399069.1:p.Arg27ProfsTer12
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7432dupC
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-943dupC
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-943dupC
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-943dupC
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-943dupC
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.295dupC
  hgvsp: ENSP00000337448.1:p.Arg99ProfsTer12
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.295dupC
  hgvsp: ENSP00000394338.2:p.Arg99ProfsTer12
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.295dupC
  hgvsp: ENSP00000395499.1:p.Arg99ProfsTer12
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.295dupC
  hgvsp: ENSP00000406997.1:p.Arg99ProfsTer12
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-943dupC
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3480dupC
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-943dupC
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-943dupC
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-943dupC
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6096
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31892
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg99ProfsTer12
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

9-131890321-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890321
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890321
    reference: chr 9
allele count: 1
allele frequency: 2.456761006289308e-5
allele num: 40704
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-943C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.79C>T
  hgvsp: ENSP00000399069.1:p.Arg27Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.295C>T
  hgvsp: ENSP00000394338.2:p.Arg99Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-943C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.295C>T
  hgvsp: ENSP00000395499.1:p.Arg99Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.295C>T
  hgvsp: ENSP00000406997.1:p.Arg99Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-943C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-943C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7432C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-943C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-943C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.295C>T
  hgvsp: ENSP00000337448.1:p.Arg99Cys
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3480C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-943C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-943C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31467
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg99Cys
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

9-131890323-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890323
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890323
    reference: chr 9
allele count: 9
allele frequency: 2.215875517037621e-4
allele num: 40616
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-941C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-941C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-941C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.297C>T
  hgvsp: ENST00000452489.2:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3478C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-941C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-941C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-941C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.81C>T
  hgvsp: ENST00000414331.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.297C>T
  hgvsp: ENST00000455292.1:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.297C>T
  hgvsp: ENST00000337738.1:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-941C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.297C>T
  hgvsp: ENST00000445241.1:c.297C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-941C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7434C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8646
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31293
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg99Arg
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-131890324-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890324
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890324
    reference: chr 9
allele count: 1
allele frequency: 2.480897092388608e-5
allele num: 40308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.298G>A
  hgvsp: ENSP00000337448.1:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.298G>A
  hgvsp: ENSP00000394338.2:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-940G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-940G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-940G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.82G>A
  hgvsp: ENSP00000399069.1:p.Ala28Thr
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3477G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7435G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.298G>A
  hgvsp: ENSP00000406997.1:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-940G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.298G>A
  hgvsp: ENSP00000395499.1:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-940G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-940G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-940G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-940G>A
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9098
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30911
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6264
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala100Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

9-131890326-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890326
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890326
    reference: chr 9
allele count: 1
allele frequency: 2.483484825907714e-5
allele num: 40266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-938C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-938C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-938C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.84C>T
  hgvsp: ENST00000414331.1:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-938C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-938C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-938C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3475C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.300C>T
  hgvsp: ENST00000337738.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.300C>T
  hgvsp: ENST00000445241.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-938C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.300C>T
  hgvsp: ENST00000452489.2:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.300C>T
  hgvsp: ENST00000455292.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-938C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7437C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30752
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala100Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

9-131890327-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890327
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890327
    reference: chr 9
allele count: 42
allele frequency: 1.05089325927038e-3
allele num: 39966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.301G>A
  hgvsp: ENSP00000406997.1:p.Gly101Arg
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7438G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-937G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.301G>A
  hgvsp: ENSP00000395499.1:p.Gly101Arg
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.301G>A
  hgvsp: ENSP00000337448.1:p.Gly101Arg
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-937G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-937G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.85G>A
  hgvsp: ENSP00000399069.1:p.Gly29Arg
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3474G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-937G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-937G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-937G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-937G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.301G>A
  hgvsp: ENSP00000394338.2:p.Gly101Arg
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-937G>A
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30460
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 9619
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly101Arg
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD

9-131890343-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890343
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890343
    reference: chr 9
allele count: 2
allele frequency: 5.536485439043296e-5
allele num: 36124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-921C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-921C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7454C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-921C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.317C>T
  hgvsp: ENSP00000337448.1:p.Ser106Leu
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3458C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-921C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.101C>T
  hgvsp: ENSP00000399069.1:p.Ser34Leu
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.317C>T
  hgvsp: ENSP00000394338.2:p.Ser106Leu
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.317C>T
  hgvsp: ENSP00000395499.1:p.Ser106Leu
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.317C>T
  hgvsp: ENSP00000406997.1:p.Ser106Leu
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-921C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-921C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-921C>T
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-921C>T
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16468
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25266
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser106Leu
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

9-131890344-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890344
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890344
    reference: chr 9
allele count: 2
allele frequency: 5.611987204669173e-5
allele num: 35638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337448
  ensembl transcript: ENST00000337738
  gene symbol: PPP2R4
  hgvsc: ENST00000337738.1:c.318G>A
  hgvsp: ENST00000337738.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393092
  ensembl transcript: ENST00000453358
  gene symbol: PPP2R4
  hgvsc: ENST00000453358.1:c.112-920G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000399069
  ensembl transcript: ENST00000414331
  gene symbol: PPP2R4
  hgvsc: ENST00000414331.1:c.102G>A
  hgvsp: ENST00000414331.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000347109
  ensembl transcript: ENST00000355007
  gene symbol: PPP2R4
  hgvsc: ENST00000355007.3:c.217-3457G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000351885
  ensembl transcript: ENST00000358994
  gene symbol: PPP2R4
  hgvsc: ENST00000358994.4:c.217-920G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000335200
  ensembl transcript: ENST00000348141
  gene symbol: PPP2R4
  hgvsc: ENST00000348141.5:c.235-920G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000393796
  ensembl transcript: ENST00000440346
  gene symbol: PPP2R4
  hgvsc: ENST00000440346.1:c.112-920G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000406997
  ensembl transcript: ENST00000445241
  gene symbol: PPP2R4
  hgvsc: ENST00000445241.1:c.318G>A
  hgvsp: ENST00000445241.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.318G>A
  hgvsp: ENST00000455292.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000337412
  ensembl transcript: ENST00000347048
  gene symbol: PPP2R4
  hgvsc: ENST00000347048.4:c.129+7455G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000394338
  ensembl transcript: ENST00000452489
  gene symbol: PPP2R4
  hgvsc: ENST00000452489.2:c.318G>A
  hgvsp: ENST00000452489.2:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-920G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000377036
  ensembl transcript: ENST00000393370
  gene symbol: PPP2R4
  hgvsc: ENST00000393370.2:c.217-920G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000400314
  ensembl transcript: ENST00000417504
  gene symbol: PPP2R4
  hgvsc: ENST00000417504.1:c.286-920G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000349726
  ensembl transcript: ENST00000357197
  gene symbol: PPP2R4
  hgvsc: ENST00000357197.4:c.130-920G>A
  variant of: http://identifiers.org/hgnc/9308
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17062
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3127
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6009
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24800
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser106Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

9-131890396-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131890396
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131890396
    reference: chr 9
allele count: 1
allele frequency: 4.225828262339418e-5
allele num: 23664
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000403542
  ensembl transcript: ENST00000417728
  gene symbol: PPP2R4
  hgvsc: ENST00000417728.1:c.112-868G>A
  variant of: http://identifiers.org/hgnc/9308
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119383
  ensembl protein: ENSP00000395499
  ensembl transcript: ENST00000455292
  gene symbol: PPP2R4
  hgvsc: ENST00000455292.1:c.321+49G>A
  variant of: http://identifiers.org/hgnc/9308
canonical: true
consequence: intron
filter: PASS
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 4985
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1393
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3088
bin: 9.75e1
variant carriers: 7

GenotypeDepth
all individuals: 3575
bin: 6.75e1
variant carriers: 5

GenotypeDepth
all individuals: 1318
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5463
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4153
bin: 6.25e1
variant carriers: 9

GenotypeDepth
all individuals: 3588
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8315
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1047
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1794
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2877
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 678
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2305
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2354
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 724
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1687
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 685
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 862
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2014
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 23124
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 2443
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5647
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 749
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 5.75e1
variant carriers: 3

Latino
type: Population
allele count: 2
allele frequency: 2.262443438914027e-4
allele num: 8840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.635184989986297e-4
allele num: 56922
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.24595066035385e-4
allele num: 8026
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 1.899535669058675e-3
allele num: 4738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.391594767603674e-4
allele num: 7186
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 5.564830272676684e-4
allele num: 10782
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.313e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.61e-2

MQ
type: SiteQuality
SIO_000300: 5.823e1

FS
type: SiteQuality
SIO_000300: 2.5504e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.263e0

MQRankSum
type: SiteQuality
SIO_000300: -1.473e0

DP
type: SiteQuality
SIO_000300: 3.094873e6

QD
type: SiteQuality
SIO_000300: 6.5e-1

GenotypeDepth
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bin: 3.75e1
variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.487314695055218e-4
allele num: 60306
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.659969088098918e-5
allele num: 10352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8970
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.269680040629761e-4
allele num: 7876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 11
allele frequency: 2.150958154086821e-3
allele num: 5114
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.446183953033268e-4
allele num: 12264
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.815e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.705e0

DP
type: SiteQuality
SIO_000300: 3.074759e6

VQSLOD
type: SiteQuality
SIO_000300: -6.712e0

FS
type: SiteQuality
SIO_000300: 2.8311e1

QD
type: SiteQuality
SIO_000300: 4.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.496e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.25e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.642e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.035e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 11

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 28481
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variant carriers: 4

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.659108557229383e-5
allele num: 64390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 1.641736592484495e-3
allele num: 5482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8376
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.16e-1

FS
type: SiteQuality
SIO_000300: 2.6056e1

VQSLOD
type: SiteQuality
SIO_000300: -5.343e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.662e0

QD
type: SiteQuality
SIO_000300: 2.2e-1

MQ
type: SiteQuality
SIO_000300: 5.688e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.543e0

MQRankSum
type: SiteQuality
SIO_000300: -2.505e0

DP
type: SiteQuality
SIO_000300: 2.842517e6

GenotypeDepth
all individuals: 3120
bin: 6.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3314
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variant carriers: 0

GenotypeQuality
all individuals: 3331
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.188495364868077e-4
allele num: 8414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.525e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.949e0

VQSLOD
type: SiteQuality
SIO_000300: -2.05e0

MQ
type: SiteQuality
SIO_000300: 5.797e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 2.806423e6

MQRankSum
type: SiteQuality
SIO_000300: 3.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e0

QD
type: SiteQuality
SIO_000300: 2.487e1

GenotypeDepth
all individuals: 565
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variant carriers: 0

GenotypeDepth
all individuals: 4968
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.139489194499017e-5
allele num: 16288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.18920574631666e-5
allele num: 65294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.807213e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.244e0

VQSLOD
type: SiteQuality
SIO_000300: 7.000000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.257e1

FS
type: SiteQuality
SIO_000300: 3.477e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-2

MQ
type: SiteQuality
SIO_000300: 5.891e1

GenotypeDepth
all individuals: 2179
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variant carriers: 0

GenotypeDepth
all individuals: 144
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16346
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.517911353976928e-4
allele num: 6588
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.834e1

FS
type: SiteQuality
SIO_000300: 3.684e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.04e-1

DP
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VQSLOD
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SIO_000300: -1.637e0

QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 2.89e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527603800678256e-5
allele num: 65462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.1e-2

FS
type: SiteQuality
SIO_000300: 3.861e0

DP
type: SiteQuality
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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European (Finnish)
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African
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Latino
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FS
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BaseQRankSum
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QD
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MQ
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ReadPosRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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Latino
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European (Non-Finnish)
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East Asian
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African
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South Asian
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ReadPosRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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FS
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BaseQRankSum
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QD
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MQRankSum
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DP
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Latino
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African
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East Asian
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European (Non-Finnish)
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European (Finnish)
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South Asian
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ClippingRankSum
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InbreedingCoeff
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FS
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MQ
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ReadPosRankSum
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DP
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MQRankSum
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VQSLOD
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QD
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East Asian
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South Asian
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European (Non-Finnish)
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African
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ClippingRankSum
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InbreedingCoeff
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QD
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MQ
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MQRankSum
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African
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East Asian
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VQSLOD
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MQ
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FS
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DP
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Latino
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African
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European (Finnish)
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allele frequency: 0.0e0
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Other
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BaseQRankSum
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DP
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FS
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VQSLOD
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MQ
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -2.0e-4

ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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East Asian
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allele frequency: 0.0e0
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African
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South Asian
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Other
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MQ
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InbreedingCoeff
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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Other
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Latino
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ReadPosRankSum
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InbreedingCoeff
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QD
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQRankSum
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DP
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MQ
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SIO_000300: 5.917e1

FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 2.927971891469842e-4
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num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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Latino
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South Asian
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East Asian
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Other
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VQSLOD
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ReadPosRankSum
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MQ
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MQRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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Latino
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African
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South Asian
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VQSLOD
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DP
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MQ
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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FS
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BaseQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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Other
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African
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European (Non-Finnish)
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East Asian
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Latino
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South Asian
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MQ
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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FS
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QD
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele num: 66052
num of homozygotes: 0

South Asian
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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MQ
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BaseQRankSum
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QD
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MQRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
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FS
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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African
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South Asian
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European (Finnish)
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East Asian
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European (Non-Finnish)
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VQSLOD
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MQ
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DP
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MQRankSum
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ClippingRankSum
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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Other
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European (Finnish)
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European (Non-Finnish)
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East Asian
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African
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VQSLOD
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MQ
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FS
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MQRankSum
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DP
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: -4.91e-1

QD
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SIO_000300: 1.372e1

InbreedingCoeff
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SIO_000300: 1.0e-4

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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African
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European (Finnish)
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East Asian
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MQ
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SIO_000300: 5.809e1

MQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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DP
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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East Asian
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African
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Other
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FS
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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DP
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MQ
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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African
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European (Non-Finnish)
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MQ
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ReadPosRankSum
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VQSLOD
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FS
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QD
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MQRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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DP
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FS
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MQ
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GenotypeQuality
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East Asian
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European (Finnish)
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Latino
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African
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FS
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MQ
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InbreedingCoeff
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DP
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VQSLOD
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GenotypeQuality
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South Asian
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African
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Latino
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European (Non-Finnish)
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MQ
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DP
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ClippingRankSum
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FS
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ReadPosRankSum
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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BaseQRankSum
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South Asian
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Latino
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European (Non-Finnish)
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East Asian
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FS
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InbreedingCoeff
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VQSLOD
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QD
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MQ
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European (Non-Finnish)
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European (Finnish)
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FS
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DP
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MQ
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VQSLOD
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East Asian
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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South Asian
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East Asian
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MQ
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DP
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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BaseQRankSum
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VQSLOD
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MQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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African
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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MQ
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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FS
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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num of homozygotes: 0

East Asian
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South Asian
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European (Non-Finnish)
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allele num: 65646
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Latino
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQ
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FS
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ReadPosRankSum
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MQRankSum
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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Other
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European (Finnish)
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South Asian
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African
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Latino
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VQSLOD
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ReadPosRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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QD
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MQ
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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East Asian
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African
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FS
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QD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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DP
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VQSLOD
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MQRankSum
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InbreedingCoeff
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FS
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.719916288803627e-5
allele num: 11468
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.123595505617978e-3
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.437538086532602e-4
allele num: 16410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65478
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.196e0

MQRankSum
type: SiteQuality
SIO_000300: -1.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.855e1

VQSLOD
type: SiteQuality
SIO_000300: -1.184e0

QD
type: SiteQuality
SIO_000300: 1.395e1

ReadPosRankSum
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SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.74e-1

DP
type: SiteQuality
SIO_000300: 2.78979e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.849e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 148
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variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 2.959163543105149e-4
allele num: 10138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.799e1

ReadPosRankSum
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SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.575e0

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
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DP
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SIO_000300: 2.78884e6

BaseQRankSum
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SIO_000300: -4.361e0

MQRankSum
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SIO_000300: 8.94e-1

VQSLOD
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SIO_000300: -1.62e0

QD
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SIO_000300: 1.53e1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 15

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 14
allele frequency: 1.661918328584995e-3
allele num: 8424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65402
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.719916288803627e-5
allele num: 11468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-2

DP
type: SiteQuality
SIO_000300: 2.775925e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.62e-1

MQ
type: SiteQuality
SIO_000300: 5.839e1

QD
type: SiteQuality
SIO_000300: 1.544e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.12e0

GenotypeDepth
all individuals: 2570
bin: 1.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 3

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1190
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 21

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2240
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65280
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10090
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

East Asian
type: Population
allele count: 20
allele frequency: 2.376425855513308e-3
allele num: 8416
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.104260774020266e-5
allele num: 16382
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.509e1

DP
type: SiteQuality
SIO_000300: 2.768122e6

VQSLOD
type: SiteQuality
SIO_000300: 3.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

MQ
type: SiteQuality
SIO_000300: 5.845e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.08e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.532942943863629e-5
allele num: 65234
num of homozygotes: 0

Other
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allele count: 0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.8e-2

ReadPosRankSum
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MQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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ClippingRankSum
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DP
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QD
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MQ
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SIO_000300: 5.905e1

GenotypeDepth
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variant carriers: 4

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3100
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 9.07605736068252e-5
allele num: 11018
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European (Finnish)
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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VQSLOD
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BaseQRankSum
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MQ
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QD
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DP
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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European (Non-Finnish)
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num of homozygotes: 0

East Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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MQRankSum
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QD
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VQSLOD
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FS
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DP
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ClippingRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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Other
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QD
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MQRankSum
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FS
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MQ
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BaseQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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Other
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num of homozygotes: 0

VQSLOD
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InbreedingCoeff
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MQ
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ReadPosRankSum
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ClippingRankSum
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DP
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BaseQRankSum
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FS
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MQRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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BaseQRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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DP
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MQ
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ClippingRankSum
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FS
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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East Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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DP
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ClippingRankSum
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MQ
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MQRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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African
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Latino
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East Asian
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European (Finnish)
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QD
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FS
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQRankSum
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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South Asian
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.44e-1

QD
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SIO_000300: 1.287e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

MQRankSum
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SIO_000300: 1.69e-1

FS
type: SiteQuality
SIO_000300: 1.143e0

BaseQRankSum
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SIO_000300: 1.69e0

MQ
type: SiteQuality
SIO_000300: 5.877e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.21e-2

DP
type: SiteQuality
SIO_000300: 8.52687e5

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 1.167133520074697e-4
allele num: 8568
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 5.720823798627002e-4
allele num: 1748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4592
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2616
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2494
num of homozygotes: 0

European (Non-Finnish)
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allele count: 24
allele frequency: 1.12760759255779e-3
allele num: 21284
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

BaseQRankSum
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SIO_000300: -7.42e-1

InbreedingCoeff
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DP
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SIO_000300: 8.5998e5

VQSLOD
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MQRankSum
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SIO_000300: 1.3e-2

ReadPosRankSum
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FS
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MQ
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QD
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SIO_000300: 1.208e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.680333239726669e-5
allele num: 21366
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2514
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.143e0

FS
type: SiteQuality
SIO_000300: 5.497e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.17e-2

BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 3.58e0

DP
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SIO_000300: 8.58833e5

VQSLOD
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SIO_000300: -4.399e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.78e0

MQ
type: SiteQuality
SIO_000300: 5.845e1

ReadPosRankSum
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SIO_000300: -2.388e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1768
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 2.178649237472767e-4
allele num: 4590
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 21378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2528
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2624
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.964e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.02e-1

DP
type: SiteQuality
SIO_000300: 8.59167e5

FS
type: SiteQuality
SIO_000300: 1.076e0

MQRankSum
type: SiteQuality
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QD
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VQSLOD
type: SiteQuality
SIO_000300: 4.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.21e-2

ClippingRankSum
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 9.189487226612754e-5
allele num: 21764
num of homozygotes: 0

Latino
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DP
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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FS
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InbreedingCoeff
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MQ
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ReadPosRankSum
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QD
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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Other
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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FS
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QD
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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South Asian
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Other
type: Population
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 9.443762394938144e-5
allele num: 21178
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.31916e5

QD
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SIO_000300: 1.352e1

FS
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BaseQRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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European (Non-Finnish)
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.53e-2

BaseQRankSum
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MQRankSum
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FS
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ClippingRankSum
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VQSLOD
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MQ
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QD
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 4.476275738585497e-4
allele num: 4468
num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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MQRankSum
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FS
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SIO_000300: 0.0e0

ClippingRankSum
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QD
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DP
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ReadPosRankSum
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MQ
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SIO_000300: 6.083e1

InbreedingCoeff
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SIO_000300: -1.65e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 4.851542790607413e-5
allele num: 20612
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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BaseQRankSum
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FS
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SIO_000300: 0.0e0

MQ
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQRankSum
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DP
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 8606
num of homozygotes: 0

Other
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European (Finnish)
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African
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allele num: 4424
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Latino
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European (Non-Finnish)
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allele num: 20572
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East Asian
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FS
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DP
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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MQ
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

African
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South Asian
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Latino
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East Asian
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European (Finnish)
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Other
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ClippingRankSum
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MQ
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ReadPosRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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DP
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MQRankSum
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele num: 1718
num of homozygotes: 0

European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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QD
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MQ
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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FS
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SIO_000300: 2.187e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

DP
type: SiteQuality
SIO_000300: 8.04719e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.93e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

GenotypeDepth
all individuals: 787
bin: 4.25e1
variant carriers: 0

GenotypeDepth
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bin: 3.25e1
variant carriers: 0

GenotypeDepth
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bin: 1.25e1
variant carriers: 18

GenotypeDepth
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bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1202
bin: 3.75e1
variant carriers: 1

GenotypeDepth
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bin: 1.75e1
variant carriers: 4

GenotypeDepth
all individuals: 95
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 72
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 665
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1516
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 485
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 843
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32606
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 491
bin: 9.25e1
variant carriers: 2

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9898
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1556
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3176
bin: 9.75e1
variant carriers: 38

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5325
bin: 6.25e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.984717673910886e-4
allele num: 20154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2272
num of homozygotes: 0

South Asian
type: Population
allele count: 37
allele frequency: 4.305329299511287e-3
allele num: 8594
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 5.88235294117647e-4
allele num: 1700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2520
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

FS
type: SiteQuality
SIO_000300: 1.199e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.07e-2

DP
type: SiteQuality
SIO_000300: 8.032e5

QD
type: SiteQuality
SIO_000300: 1.246e1

GenotypeDepth
all individuals: 2200
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variant carriers: 0

GenotypeDepth
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bin: 2.25e1
variant carriers: 0

GenotypeDepth
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bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 131
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 149
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variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 205
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variant carriers: 0

GenotypeDepth
all individuals: 292
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 3141
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4149
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26338
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1986
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 2.49003984063745e-4
allele num: 4016
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1938
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.633168093735917e-5
allele num: 17752
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

DP
type: SiteQuality
SIO_000300: 7.43122e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.17e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.16e-1

QD
type: SiteQuality
SIO_000300: 7.19e0

GenotypeDepth
all individuals: 93
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 166
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 149
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variant carriers: 0

GenotypeDepth
all individuals: 202
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variant carriers: 0

GenotypeDepth
all individuals: 1201
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variant carriers: 0

GenotypeDepth
all individuals: 120
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variant carriers: 0

GenotypeDepth
all individuals: 526
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 25618
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variant carriers: 0

GenotypeQuality
all individuals: 585
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variant carriers: 0

GenotypeQuality
all individuals: 3140
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variant carriers: 1

GenotypeQuality
all individuals: 817
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variant carriers: 0

GenotypeQuality
all individuals: 681
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variant carriers: 0

GenotypeQuality
all individuals: 1516
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 489
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variant carriers: 0

GenotypeQuality
all individuals: 17456
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variant carriers: 0

GenotypeQuality
all individuals: 391
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.146920518408074e-4
allele num: 17438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4004
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.38248e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e-1

FS
type: SiteQuality
SIO_000300: 2.526e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 1.466e1

MQRankSum
type: SiteQuality
SIO_000300: -1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.33e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.88e-1