6-30030114-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30030114
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30030114
    reference: chr 6
allele count: 105532
allele frequency: 9.02492004036465e-1
allele num: 116934
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.356+4A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.334+4A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.356+4A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3435+4A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.356+4A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.356+4A>G
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4018
  bin: 2.25e1
  variant carriers: 3841
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 8444
  bin: 3.25e1
  variant carriers: 8345
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 9.75e1
  variant carriers: 2067
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 1.25e1
  variant carriers: 395
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 622
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 8.25e1
  variant carriers: 765
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 9.25e1
  variant carriers: 491
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 6.25e1
  variant carriers: 1887
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 7.75e1
  variant carriers: 1011
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 6.75e1
  variant carriers: 1554
genotype depth: GenotypeDepth
  all individuals: 7154
  bin: 4.25e1
  variant carriers: 7137
genotype depth: GenotypeDepth
  all individuals: 8452
  bin: 3.75e1
  variant carriers: 8423
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 1.75e1
  variant carriers: 1411
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 7.25e1
  variant carriers: 1233
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 2.75e1
  variant carriers: 6798
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 5.75e1
  variant carriers: 2701
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 4.75e1
  variant carriers: 5434
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 5.25e1
  variant carriers: 3776
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 5.25e1
  variant carriers: 594
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.25e1
  variant carriers: 127
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 6.25e1
  variant carriers: 1075
genotype quality: GenotypeQuality
  all individuals: 2018
  bin: 7.75e1
  variant carriers: 2001
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 6.75e1
  variant carriers: 1399
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.25e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.75e1
  variant carriers: 193
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 4.75e1
  variant carriers: 383
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 7.25e1
  variant carriers: 936
hgvs: c.356+4A>G
num of homozygotes: 47700
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

6-30030118-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30030118
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30030118
    reference: chr 6
allele count: 1
allele frequency: 8.781173164734809e-6
allele num: 113880
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.356+8T>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3435+8T>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.334+8T>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.356+8T>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.356+8T>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.356+8T>A
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10249
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9218
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4197
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1271
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34787
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
hgvs: c.356+8T>A
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

6-30030131-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30030131
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30030131
    reference: chr 6
allele count: 1
allele frequency: 9.005925899241701e-6
allele num: 111038
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.356+21C>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.356+21C>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3435+21C>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.356+21C>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.334+21C>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.356+21C>T
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7824
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9334
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1677
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26558
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5214
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2822
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
reference allele: C
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

6-30030135-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30030135
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30030135
    reference: chr 6
allele count: 5530
allele frequency: 5.022250476795932e-2
allele num: 110110
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.356+25G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3435+25G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.356+25G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.356+25G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.356+25G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.334+25G>A
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6425
  bin: 3.25e1
  variant carriers: 691
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 2.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 7.5e0
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 1.75e1
  variant carriers: 865
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 17164
  bin: 2.75e1
  variant carriers: 1079
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.25e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 8179
  bin: 2.25e1
  variant carriers: 1093
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 13142
  bin: 1.25e1
  variant carriers: 319
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 4.75e1
  variant carriers: 185
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 4.25e1
  variant carriers: 285
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 3.75e1
  variant carriers: 402
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 4.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 1641
  bin: 3.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 9.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 2872
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 8.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 10877
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3378
  bin: 6.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3525
  bin: 3.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 5.25e1
  variant carriers: 15
num of homozygotes: 172
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ

6-30030145-TTTGC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30030145
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30030141
    reference: chr 6
allele count: 1
allele frequency: 9.283499507974526e-6
allele num: 107718
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.334+37_334+40delTGCT
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3435+37_3435+40delTGCT
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.356+37_356+40delTGCT
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.356+37_356+40delTGCT
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.356+37_356+40delTGCT
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.356+37_356+40delTGCT
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5284
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18992
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10648
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4483
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1225
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14552
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4925
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14628
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: TTTGC
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

6-30030152-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30030152
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30030152
    reference: chr 6
allele count: 2
allele frequency: 1.900815449827976e-5
allele num: 105218
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.334+42A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3435+42A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.356+42A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.356+42A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.356+42A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.356+42A>G
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18625
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2127
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1179
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5253
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14056
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8433
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

6-30030153-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30030153
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30030153
    reference: chr 6
allele count: 1
allele frequency: 9.615754452094311e-6
allele num: 103996
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.356+43C>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.356+43C>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.356+43C>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3435+43C>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.356+43C>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.334+43C>T
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5748
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15354
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2508
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1049
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6649
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2807
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8520
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6858
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1197
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5248
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

6-30030154-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30030154
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30030154
    reference: chr 6
allele count: 2
allele frequency: 1.923076923076923e-5
allele num: 104000
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3435+44T>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.356+44T>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.334+44T>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.356+44T>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.356+44T>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.356+44T>A
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5785
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13556
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8550
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2500
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2534
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5242
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2796
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

6-30032401-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032401
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032401
    reference: chr 6
allele count: 2
allele frequency: 1.725744658820281e-5
allele num: 115892
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.357-49T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.357-49T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.357-49T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3436-49T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.357-49T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.335-49T>C
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3633
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6974
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3545
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4247
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum

6-30032423-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032423
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032423
    reference: chr 6
allele count: 1
allele frequency: 8.624258313785014e-6
allele num: 115952
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3436-27T>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.357-27T>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.357-27T>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.357-27T>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.357-27T>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.335-27T>G
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9718
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2542
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2203
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4803
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

6-30032426-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032426
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032426
    reference: chr 6
allele count: 1
allele frequency: 8.623812069887374e-6
allele num: 115958
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.357-24A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.357-24A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.335-24A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3436-24A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.357-24A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.357-24A>G
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9728
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4280
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9246
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3982
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26930
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

6-30032427-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032427
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032427
    reference: chr 6
allele count: 1
allele frequency: 8.623365872167224e-6
allele num: 115964
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3436-23A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.357-23A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.357-23A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.335-23A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.357-23A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.357-23A>G
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5162
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5216
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26929
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4801
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3983
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3557
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2549
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

6-30032433-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032433
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032433
    reference: chr 6
allele count: 2
allele frequency: 1.724821912137572e-5
allele num: 115954
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3436-17C>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.357-17C>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.357-17C>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.357-17C>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.335-17C>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.357-17C>G
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6979
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9271
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4286
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26934
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

6-30032446-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032446
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032446
    reference: chr 6
allele count: 28
allele frequency: 2.414792327859804e-4
allele num: 115952
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.357-4A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.357-4A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.335-4A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.357-4A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3436-4A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.357-4A>G
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8396
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6978
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4797
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9385
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
hgvs: c.357-4A>G
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-30032469-T-TCTTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032469
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032473
    reference: chr 6
allele count: 1
allele frequency: 8.629914736442405e-6
allele num: 115876
alternate allele: TCTTG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.377_380dupCTTG
  hgvsp: ENSP00000365978.2:p.Ter127Cys
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3456_3459dupCTTG
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.377_380dupCTTG
  hgvsp: ENSP00000365981.2:p.Ter127Cys
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.377_380dupCTTG
  hgvsp: ENSP00000352333.4:p.Ter127Cys
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.377_380dupCTTG
  hgvsp: ENSP00000331111.5:p.Ter127Cys
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.355_358dupCTTG
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3559
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2547
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9223
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2206
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ter127Cys
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD

6-30032473-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032473
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032473
    reference: chr 6
allele count: 1
allele frequency: 8.630659555003193e-6
allele num: 115866
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.380G>A
  hgvsp: ENST00000376782.2:c.380G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.380G>A
  hgvsp: ENST00000359374.4:c.380G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3459G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.358G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: stop_retained_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.380G>A
  hgvsp: ENST00000332435.5:c.380G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.380G>A
  hgvsp: ENST00000376785.2:c.380G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: stop retained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9746
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4282
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ter127Ter
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

6-30032478-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032478
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032478
    reference: chr 6
allele count: 1
allele frequency: 8.631702517004453e-6
allele num: 115852
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.363T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.*4T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3464T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.*4T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.*4T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.*4T>C
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6985
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2535
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4286
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4760
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2206
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

6-30032484-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032484
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032484
    reference: chr 6
allele count: 1
allele frequency: 8.632149577887885e-6
allele num: 115846
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.*10T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.*10T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3470T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.*10T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.369T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.*10T>C
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6985
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26927
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3551
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4282
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2530
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4760
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9029
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

6-30032487-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032487
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032487
    reference: chr 6
allele count: 8
allele frequency: 6.90643507087729e-5
allele num: 115834
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3473G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.*13G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.*13G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.372G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.*13G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.*13G>A
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9745
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8366
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6983
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5223
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4751
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2523
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2205
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9032
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

6-30032495-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032495
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032495
    reference: chr 6
allele count: 17550
allele frequency: 1.516617985101713e-1
allele num: 115718
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.*21A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.380A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.*21A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.*21A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3481A>G
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.*21A>G
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7070
  bin: 2.75e1
  variant carriers: 361
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 2.25e1
  variant carriers: 175
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 6.25e1
  variant carriers: 1456
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 7.75e1
  variant carriers: 761
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 7454
  bin: 3.75e1
  variant carriers: 968
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 9.25e1
  variant carriers: 348
genotype depth: GenotypeDepth
  all individuals: 5108
  bin: 4.75e1
  variant carriers: 1544
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 7.25e1
  variant carriers: 993
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 2.5e0
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 8.75e1
  variant carriers: 457
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 5.25e1
  variant carriers: 1664
genotype depth: GenotypeDepth
  all individuals: 8391
  bin: 3.25e1
  variant carriers: 630
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 8.25e1
  variant carriers: 592
genotype depth: GenotypeDepth
  all individuals: 6439
  bin: 4.25e1
  variant carriers: 1316
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 9.75e1
  variant carriers: 1531
genotype depth: GenotypeDepth
  all individuals: 2067
  bin: 6.75e1
  variant carriers: 1250
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 5.75e1
  variant carriers: 1673
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 7.5e0
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 3558
  bin: 7.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 3248
  bin: 8.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 4038
  bin: 6.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 7582
  bin: 6.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.25e1
  variant carriers: 14
num of homozygotes: 1654
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/6-30032506-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032506
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032506
    reference: chr 6
allele count: 1
allele frequency: 8.647227698799765e-6
allele num: 115644
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.*32C>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.*32C>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.*32C>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.*32C>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3492C>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.391C>A
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9068
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2289
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5665
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22070
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10262
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4814
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2848
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4453
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS

6-30032507-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032507
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032507
    reference: chr 6
allele count: 2
allele frequency: 1.729445539759953e-5
allele num: 115644
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3493T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.*33T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.*33T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.*33T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.*33T>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.392T>C
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11132
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4809
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2288
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5665
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2845
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3786
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10219
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/6-30032513-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032513
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032513
    reference: chr 6
allele count: 4
allele frequency: 3.461045928079466e-5
allele num: 115572
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.*39C>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.*39C>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.*39C>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.*39C>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.398C>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3499C>A
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6992
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9036
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4440
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5509
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2281
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

6-30032514-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032514
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032514
    reference: chr 6
allele count: 1
allele frequency: 8.659658116697553e-6
allele num: 115478
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.*40G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.399G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.*40G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.*40G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3500G>A
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.*40G>A
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10516
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4867
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6980
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4707
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8016
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5031
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22044
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3776
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

6-30032515-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032515
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032515
    reference: chr 6
allele count: 1
allele frequency: 8.656509695290859e-6
allele num: 115520
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3501G>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.400G>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.*41G>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.*41G>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.*41G>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.*41G>T
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6965
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8905
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22041
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4426
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8224
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

6-30032519-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032519
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032519
    reference: chr 6
allele count: 2
allele frequency: 1.731991617160573e-5
allele num: 115474
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.*45G>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3505G>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.*45G>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.*45G>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.*45G>T
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.404G>T
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8287
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6954
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4695
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2269
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3773
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22040
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7784
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/6-30032522-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30032522
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30032522
    reference: chr 6
allele count: 5988
allele frequency: 5.191067341701921e-2
allele num: 115352
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000463141
  gene symbol: ZNRD1
  hgvsc: ENST00000463141.1:n.407A>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000352333
  ensembl transcript: ENST00000359374
  gene symbol: ZNRD1
  hgvsc: ENST00000359374.4:c.*48A>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365981
  ensembl transcript: ENST00000376785
  gene symbol: ZNRD1
  hgvsc: ENST00000376785.2:c.*48A>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000331111
  ensembl transcript: ENST00000332435
  gene symbol: ZNRD1
  hgvsc: ENST00000332435.5:c.*48A>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000066379
  ensembl protein: ENSP00000365978
  ensembl transcript: ENST00000376782
  gene symbol: ZNRD1
  hgvsc: ENST00000376782.2:c.*48A>C
  variant of: http://identifiers.org/hgnc/13182
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066379
  ensembl transcript: ENST00000471008
  gene symbol: ZNRD1
  hgvsc: ENST00000471008.1:n.3508A>C
  variant of: http://identifiers.org/hgnc/13182
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 8.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 1.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.25e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 8745
  bin: 3.75e1
  variant carriers: 860
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 6.75e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 9706
  bin: 3.25e1
  variant carriers: 778
genotype depth: GenotypeDepth
  all individuals: 3305
  bin: 5.25e1
  variant carriers: 483
genotype depth: GenotypeDepth
  all individuals: 6953
  bin: 4.25e1
  variant carriers: 832
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.25e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.5e0
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 8071
  bin: 2.75e1
  variant carriers: 474
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 2.25e1
  variant carriers: 215
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 1.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 5.75e1
  variant carriers: 314
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 6.25e1
  variant carriers: 239
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 9.75e1
  variant carriers: 178
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 4953
  bin: 4.75e1
  variant carriers: 689
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 7.5e0
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 4246
  bin: 6.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 4215
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2431
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 966
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 2.75e1
  variant carriers: 3
num of homozygotes: 266
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/6-30035153-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035153
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035153
    reference: chr 6
allele count: 2
allele frequency: 1.662759182587586e-5
allele num: 120282
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.-35C>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-266C>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+367C>A
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8047
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9012
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4106
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3740
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2536
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3731
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29837
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3703
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7892
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2419
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

6-30035154-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035154
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035154
    reference: chr 6
allele count: 4
allele frequency: 3.325131342688036e-5
allele num: 120296
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.-34C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-265C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+368C>T
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6193
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8044
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7779
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3739
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3737
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2538
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 3711
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29841
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4130
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-30035158-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035158
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035158
    reference: chr 6
allele count: 2
allele frequency: 1.662040653514385e-5
allele num: 120334
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.-30C>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-261C>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+372C>G
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9335
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3765
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3715
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2560
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8140
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 285
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 8.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4181
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP

6-30035160-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035160
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035160
    reference: chr 6
allele count: 1
allele frequency: 8.307579835842223e-6
allele num: 120372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-259C>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.-28C>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+374C>G
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3754
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 29845
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3717
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

6-30035171-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035171
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035171
    reference: chr 6
allele count: 1
allele frequency: 8.298479718515568e-6
allele num: 120504
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+385T>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.-17T>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-248T>A
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8067
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29849
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4307
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8765
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3764
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3766
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2442
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3724
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2601
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ

6-30035201-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035201
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035201
    reference: chr 6
allele count: 1
allele frequency: 8.294487483618387e-6
allele num: 120562
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.14G>C
  hgvsp: ENSP00000365963.3:p.Gly5Ala
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-218G>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+415G>C
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6191
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9487
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3725
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3765
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29853
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2606
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8782
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4370
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3784
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly5Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

6-30035202-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035202
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035202
    reference: chr 6
allele count: 297
allele frequency: 2.463340189768429e-3
allele num: 120568
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+416G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-217G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.15G>A
  hgvsp: ENST00000376772.3:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6172
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8054
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 6.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 4444
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 6093
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8292
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 7.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9433
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 9.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 5.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 9029
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3751
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3746
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3708
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8745
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30061
  bin: 9.75e1
  variant carriers: 291
genotype quality: GenotypeQuality
  all individuals: 2587
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly5Gly
num of homozygotes: 6
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-30035211-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035211
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035211
    reference: chr 6
allele count: 2
allele frequency: 1.659365458648613e-5
allele num: 120528
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-208G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.24G>A
  hgvsp: ENST00000376772.3:c.24G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+425G>A
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9067
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8077
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3720
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2600
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2438
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3781
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8821
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29890
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4360
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3772
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu8Leu
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/6-30035214-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035214
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035214
    reference: chr 6
allele count: 1
allele frequency: 8.297653423611802e-6
allele num: 120516
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.27C>A
  hgvsp: ENSP00000365963.3:p.Ser9Arg
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+428C>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-205C>A
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9067
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8079
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8330
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3779
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8806
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2594
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3720
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4357
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2439
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3771
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser9Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/6-30035228-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035228
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035228
    reference: chr 6
allele count: 1
allele frequency: 8.299719469481931e-6
allele num: 120486
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-191A>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+442A>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.41A>C
  hgvsp: ENSP00000365963.3:p.Glu14Ala
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8078
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9067
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9476
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 26
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29889
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
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genotype quality: GenotypeQuality
  all individuals: 8882
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 2591
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3774
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genotype quality: GenotypeQuality
  all individuals: 4362
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 888
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3771
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu14Ala
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

6-30035229-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035229
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035229
    reference: chr 6
allele count: 1
allele frequency: 8.299443937256203e-6
allele num: 120490
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+443G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-190G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.42G>A
  hgvsp: ENST00000376772.3:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9478
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8079
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9065
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2590
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2439
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 906
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3771
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 8850
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu14Glu
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

6-30035250-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035250
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035250
    reference: chr 6
allele count: 1
allele frequency: 8.338336335134414e-6
allele num: 119928
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.63C>T
  hgvsp: ENST00000376772.3:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-169C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+464C>T
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 5.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
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genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr21Thr
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum

6-30035251-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035251
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035251
    reference: chr 6
allele count: 1
allele frequency: 8.340283569641367e-6
allele num: 119900
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+465G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-168G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.64G>A
  hgvsp: ENSP00000365963.3:p.Glu22Lys
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9050
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8311
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2573
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29885
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3722
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3768
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4278
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2438
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3773
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu22Lys
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

6-30035259-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035259
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035259
    reference: chr 6
allele count: 1
allele frequency: 8.359666282122017e-6
allele num: 119622
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-163+3G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.69+3G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+473G>A
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9049
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3764
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3766
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4241
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7990
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3722
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2562
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29885
  bin: 9.75e1
  variant carriers: 1
hgvs: c.69+3G>A
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP

6-30035267-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035267
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035268
    reference: chr 6
allele count: 48
allele frequency: 4.032664583123299e-4
allele num: 119028
alternate allele: CG
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.69+18dupG
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+488dupG
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-163+18dupG
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8064
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9077
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4459
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8080
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9378
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3745
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4125
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 29842
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 1.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3754
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2428
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2533
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3724
  bin: 9.25e1
  variant carriers: 4
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-30035267-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035267
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035266
    reference: chr 6
allele count: 3
allele frequency: 2.520415364452062e-5
allele num: 119028
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-163+18delG
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+488delG
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.69+18delG
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 8064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9077
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8080
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3745
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7555
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2533
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 3754
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3724
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2428
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4125
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29842
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: CG
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

6-30035269-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035269
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035269
    reference: chr 6
allele count: 2
allele frequency: 1.675547066117087e-5
allele num: 119364
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-163+13G>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+483G>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.69+13G>C
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4174
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29957
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3732
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2441
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3761
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7684
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3778
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2549
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

6-30035269-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035269
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035269
    reference: chr 6
allele count: 14
allele frequency: 1.172882946281961e-4
allele num: 119364
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-163+13G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.69+13G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+483G>T
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9070
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2441
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3778
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3732
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29957
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 4174
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3761
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7684
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

6-30035273-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035273
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035273
    reference: chr 6
allele count: 3
allele frequency: 2.514205259717403e-5
allele num: 119322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-163+17G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.69+17G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+487G>A
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8062
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3782
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3762
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29956
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2442
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3732
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

6-30035274-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035274
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035274
    reference: chr 6
allele count: 5
allele frequency: 4.191747287939505e-5
allele num: 119282
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-163+18G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.69+18G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+488G>A
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2987
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8083
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2442
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3731
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3781
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3762
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD

6-30035274-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035274
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035274
    reference: chr 6
allele count: 3
allele frequency: 2.515048372763703e-5
allele num: 119282
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-163+18G>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+488G>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.69+18G>C
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2987
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3781
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2442
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

6-30035275-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035275
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035275
    reference: chr 6
allele count: 1
allele frequency: 8.385462961410099e-6
allele num: 119254
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+489C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.69+19C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-163+19C>T
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8017
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4144
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3761
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2547
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3780
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2441
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7705
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3732
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29954
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

6-30035277-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035277
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035277
    reference: chr 6
allele count: 1
allele frequency: 8.390528771123156e-6
allele num: 119182
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.69+21G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-163+21G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+491G>T
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9048
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2442
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3731
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3778
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4147
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2552
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29956
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3761
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-30035286-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035286
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035286
    reference: chr 6
allele count: 10
allele frequency: 8.400678774845007e-5
allele num: 119038
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-163+30A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+500A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.69+30A>G
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5046
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7872
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8082
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4114
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3758
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
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genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 98
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genotype quality: GenotypeQuality
  all individuals: 89
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29959
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 23
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
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genotype quality: GenotypeQuality
  all individuals: 77
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genotype quality: GenotypeQuality
  all individuals: 7261
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3730
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-30035293-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035293
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035293
    reference: chr 6
allele count: 1
allele frequency: 8.430139434506248e-6
allele num: 118622
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.69+37T>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-163+37T>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+507T>A
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2988
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8075
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3868
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29952
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2440
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 923
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genotype quality: GenotypeQuality
  all individuals: 3746
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3725
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD

6-30035297-AGATACTGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035297
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035289
    reference: chr 6
allele count: 1
allele frequency: 8.428860418071477e-6
allele num: 118640
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8077
  bin: 4.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 7552
  bin: 2.75e1
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genotype depth: GenotypeDepth
  all individuals: 706
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genotype quality: GenotypeQuality
  all individuals: 2441
  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 6421
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 283
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 3861
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 3742
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 497
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 3720
  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 3725
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: AGATACTGG
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

6-30035306-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30035306
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30035306
    reference: chr 6
allele count: 1
allele frequency: 8.442238206193226e-6
allele num: 118452
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-88+520G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-163+50G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.69+50G>A
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9128
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8085
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genotype depth: GenotypeDepth
  all individuals: 1249
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4948
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3723
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2442
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29955
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

6-30036316-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036316
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036316
    reference: chr 6
allele count: 1
allele frequency: 8.786419709696694e-6
allele num: 113812
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-138A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-87-51A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-87-51A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-87-51A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-87-51A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.70-51A>G
  variant of: http://identifiers.org/hgnc/9285
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 199
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 575
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genotype quality: GenotypeQuality
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

6-30036319-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036319
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036319
    reference: chr 6
allele count: 4
allele frequency: 3.513456538542618e-5
allele num: 113848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-87-48G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-135G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-87-48G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-87-48G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-87-48G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.70-48G>T
  variant of: http://identifiers.org/hgnc/9285
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1831
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-30036320-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036320
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036320
    reference: chr 6
allele count: 1
allele frequency: 8.783487044356609e-6
allele num: 113850
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-87-47G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-87-47G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-87-47G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-134G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-87-47G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.70-47G>T
  variant of: http://identifiers.org/hgnc/9285
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10526
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4905
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16103
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6183
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21288
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP

6-30036330-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036330
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036330
    reference: chr 6
allele count: 6
allele frequency: 5.265005265005265e-5
allele num: 113960
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-87-37G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-124G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-87-37G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.70-37G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-87-37G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-87-37G>A
  variant of: http://identifiers.org/hgnc/9285
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10562
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22440
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1832
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1959
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2516
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-30036333-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036333
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036333
    reference: chr 6
allele count: 8423
allele frequency: 7.37320331238292e-2
allele num: 114238
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-87-34G>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.70-34G>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-121G>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-87-34G>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-87-34G>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-87-34G>C
  variant of: http://identifiers.org/hgnc/9285
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 7.25e1
  variant carriers: 458
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 9.75e1
  variant carriers: 500
genotype depth: GenotypeDepth
  all individuals: 4269
  bin: 3.75e1
  variant carriers: 385
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 4.75e1
  variant carriers: 677
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 8.75e1
  variant carriers: 217
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 5.25e1
  variant carriers: 784
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 9.25e1
  variant carriers: 147
genotype depth: GenotypeDepth
  all individuals: 6301
  bin: 2.25e1
  variant carriers: 371
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 4.25e1
  variant carriers: 623
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 7.75e1
  variant carriers: 336
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 7.5e0
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 16889
  bin: 2.75e1
  variant carriers: 271
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 1.75e1
  variant carriers: 446
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 1.25e1
  variant carriers: 295
genotype depth: GenotypeDepth
  all individuals: 10070
  bin: 3.25e1
  variant carriers: 303
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 6.75e1
  variant carriers: 530
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 8.25e1
  variant carriers: 258
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 6.25e1
  variant carriers: 648
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 5.75e1
  variant carriers: 685
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 7.5e0
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 22035
  bin: 6.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 4.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 2.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 8.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 4.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 8.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 6031
  bin: 6.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 1799
  bin: 7.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 2.25e1
  variant carriers: 9
num of homozygotes: 493
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

6-30036334-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036334
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036334
    reference: chr 6
allele count: 1
allele frequency: 8.74691671185907e-6
allele num: 114326
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-87-33A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.70-33A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-120A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-87-33A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-87-33A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-87-33A>G
  variant of: http://identifiers.org/hgnc/9285
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4320
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7039
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2561
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1338
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

6-30036338-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036338
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036338
    reference: chr 6
allele count: 9
allele frequency: 7.866857802174749e-5
allele num: 114404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-87-29G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-87-29G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-116G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-87-29G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-87-29G>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.70-29G>T
  variant of: http://identifiers.org/hgnc/9285
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11447
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12275
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2558
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26651
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-30036343-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036343
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036343
    reference: chr 6
allele count: 23
allele frequency: 2.007962005866741e-4
allele num: 114544
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-87-24G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-87-24G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-87-24G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-87-24G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-111G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.70-24G>A
  variant of: http://identifiers.org/hgnc/9285
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19753
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4320
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2574
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7174
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

6-30036345-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036345
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036345
    reference: chr 6
allele count: 428
allele frequency: 3.732319444686677e-3
allele num: 114674
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-87-22A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-109A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-87-22A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-87-22A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-87-22A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.70-22A>G
  variant of: http://identifiers.org/hgnc/9285
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 9.75e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11442
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8062
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 5.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 19778
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 5.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 6.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 6.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7181
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2095
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD

6-30036345-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036345
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036344
    reference: chr 6
allele count: 1
allele frequency: 8.720372534314665e-6
allele num: 114674
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.70-21delT
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-87-21delT
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-87-21delT
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-108delT
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-87-21delT
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-87-21delT
  variant of: http://identifiers.org/hgnc/9285
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2095
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12341
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1710
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7181
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: AT
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

6-30036346-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036346
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036346
    reference: chr 6
allele count: 1
allele frequency: 8.719155985700584e-6
allele num: 114690
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-87-21T>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-87-21T>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-108T>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.70-21T>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-87-21T>C
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-87-21T>C
  variant of: http://identifiers.org/hgnc/9285
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 7267
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2586
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2114
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1725
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27551
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum

6-30036350-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036350
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036350
    reference: chr 6
allele count: 1
allele frequency: 8.706402688537151e-6
allele num: 114858
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-87-17C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.70-17C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-87-17C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-104C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-87-17C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-87-17C>T
  variant of: http://identifiers.org/hgnc/9285
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2848
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20104
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
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genotype depth: GenotypeDepth
  all individuals: 788
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 683
  bin: 6.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1335
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genotype quality: GenotypeQuality
  all individuals: 2128
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 797
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genotype quality: GenotypeQuality
  all individuals: 1728
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 808
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 45
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2600
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

6-30036360-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036360
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036360
    reference: chr 6
allele count: 2
allele frequency: 1.73460537727667e-5
allele num: 115300
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.70-7C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-87-7C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-87-7C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-87-7C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-87-7C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-94C>T
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
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genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 165
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2633
  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 74
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
hgvs: c.70-7C>T
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

6-30036369-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036369
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036369
    reference: chr 6
allele count: 1
allele frequency: 8.646330497336931e-6
allele num: 115656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-85G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.72G>A
  hgvsp: ENST00000376772.3:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-85G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-85G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-85G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-85G>A
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 165
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11962
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
hgvs: c.72G>A
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

6-30036373-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036373
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036373
    reference: chr 6
allele count: 1
allele frequency: 8.640951195907645e-6
allele num: 115728
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.76C>T
  hgvsp: ENSP00000365963.3:p.Arg26Trp
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-81C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-81C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-81C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-81C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-81C>T
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1765
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7468
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg26Trp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD

6-30036374-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036374
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036374
    reference: chr 6
allele count: 5
allele frequency: 4.318013023127278e-5
allele num: 115794
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.77G>A
  hgvsp: ENSP00000365963.3:p.Arg26Gln
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-80G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-80G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-80G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-80G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-80G>A
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7473
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11963
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29297
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg26Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

6-30036384-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036384
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036384
    reference: chr 6
allele count: 1
allele frequency: 8.62217623728229e-6
allele num: 115980
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-70C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.87C>T
  hgvsp: ENST00000376772.3:c.87C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-70C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11961
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2180
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1778
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29474
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr29Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-30036395-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036395
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036395
    reference: chr 6
allele count: 1
allele frequency: 8.616084506556841e-6
allele num: 116062
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.98G>A
  hgvsp: ENSP00000365963.3:p.Arg33Gln
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-59G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-59G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-59G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-59G>A
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-59G>A
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29572
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1781
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2186
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11962
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2671
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg33Gln
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

6-30036398-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036398
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036398
    reference: chr 6
allele count: 4
allele frequency: 3.446018126055343e-5
allele num: 116076
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-56A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-56A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-56A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-56A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.101A>G
  hgvsp: ENSP00000365963.3:p.Lys34Arg
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-56A>G
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20832
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2188
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1783
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Lys34Arg
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

6-30036408-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 30036408
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 30036408
    reference: chr 6
allele count: 28
allele frequency: 2.411381721726549e-4
allele num: 116116
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365956
  ensembl transcript: ENST00000376765
  gene symbol: PPP1R11
  hgvsc: ENST00000376765.2:c.-46A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365949
  ensembl transcript: ENST00000376758
  gene symbol: PPP1R11
  hgvsc: ENST00000376758.1:c.-46A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365960
  ensembl transcript: ENST00000376769
  gene symbol: PPP1R11
  hgvsc: ENST00000376769.2:c.-46A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365964
  ensembl transcript: ENST00000376773
  gene symbol: PPP1R11
  hgvsc: ENST00000376773.1:c.-46A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365954
  ensembl transcript: ENST00000376763
  gene symbol: PPP1R11
  hgvsc: ENST00000376763.1:c.-46A>G
  variant of: http://identifiers.org/hgnc/9285
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204619
  ensembl protein: ENSP00000365963
  ensembl transcript: ENST00000376772
  gene symbol: PPP1R11
  hgvsc: ENST00000376772.3:c.111A>G
  hgvsp: ENST00000376772.3:c.111A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9285
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20860
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4324
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9360
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7530
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro37Pro
num of homozygotes: 1
reference allele: A

GenotypeQuality
all individuals: 2396
bin: 8.25e1
variant carriers: 2383

GenotypeQuality
all individuals: 61
bin: 2.5e0
variant carriers: 12

GenotypeQuality
all individuals: 49
bin: 1.25e1
variant carriers: 47

GenotypeQuality
all individuals: 90
bin: 7.5e0
variant carriers: 77

GenotypeQuality
all individuals: 164
bin: 4.25e1
variant carriers: 160

GenotypeQuality
all individuals: 1354
bin: 8.75e1
variant carriers: 1350

GenotypeQuality
all individuals: 44213
bin: 9.75e1
variant carriers: 44182

GenotypeQuality
all individuals: 2571
bin: 9.25e1
variant carriers: 2564

GenotypeQuality
all individuals: 453
bin: 5.75e1
variant carriers: 446

Latino
type: Population
allele count: 10692
allele frequency: 9.346153846153846e-1
allele num: 11440
num of homozygotes: 5007

South Asian
type: Population
allele count: 15206
allele frequency: 9.352933940214049e-1
allele num: 16258
num of homozygotes: 7121

European (Non-Finnish)
type: Population
allele count: 55942
allele frequency: 8.766414893283605e-1
allele num: 63814
num of homozygotes: 24507

African
type: Population
allele count: 8680
allele frequency: 9.198813056379822e-1
allele num: 9436
num of homozygotes: 3996

East Asian
type: Population
allele count: 8437
allele frequency: 9.904907255224231e-1
allele num: 8518
num of homozygotes: 4178

Other
type: Population
allele count: 777
allele frequency: 8.86986301369863e-1
allele num: 876
num of homozygotes: 346

European (Finnish)
type: Population
allele count: 5798
allele frequency: 8.795509708737864e-1
allele num: 6592
num of homozygotes: 2545

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.16e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.652725e6

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

VQSLOD
type: SiteQuality
SIO_000300: 3.85e0

QD
type: SiteQuality
SIO_000300: 3.237e1

GenotypeQuality
all individuals: 205
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3207
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6690
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2020
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15840
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.101806963420009e-4
allele num: 9076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11054
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.645e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.95e-1

QD
type: SiteQuality
SIO_000300: 1.261e1

MQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

DP
type: SiteQuality
SIO_000300: 1.636693e6

GenotypeQuality
all individuals: 390
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1128
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3174
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.646686866025556e-5
allele num: 60728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8054
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10698
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.482292e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.746e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.598e0

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1246
bin: 7.75e1
variant carriers: 26

GenotypeQuality
all individuals: 22832
bin: 6.25e1
variant carriers: 26

GenotypeQuality
all individuals: 487
bin: 4.25e1
variant carriers: 10

GenotypeQuality
all individuals: 933
bin: 7.25e1
variant carriers: 15

GenotypeQuality
all individuals: 305
bin: 5.75e1
variant carriers: 20

GenotypeQuality
all individuals: 397
bin: 8.75e1
variant carriers: 32

GenotypeQuality
all individuals: 7451
bin: 9.75e1
variant carriers: 5126

African
type: Population
allele count: 459
allele frequency: 5.24211968935587e-2
allele num: 8756
num of homozygotes: 7

Other
type: Population
allele count: 51
allele frequency: 6.189320388349515e-2
allele num: 824
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 136
allele frequency: 2.154626108998733e-2
allele num: 6312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3826
allele frequency: 6.355692880162131e-2
allele num: 60198
num of homozygotes: 145

Latino
type: Population
allele count: 406
allele frequency: 3.838880484114977e-2
allele num: 10576
num of homozygotes: 8

East Asian
type: Population
allele count: 265
allele frequency: 3.32246740220662e-2
allele num: 7976
num of homozygotes: 6

South Asian
type: Population
allele count: 387
allele frequency: 2.501939487975174e-2
allele num: 15468
num of homozygotes: 3

FS
type: SiteQuality
SIO_000300: 7.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.02e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.308e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.36e-1

DP
type: SiteQuality
SIO_000300: 1.411289e6

QD
type: SiteQuality
SIO_000300: 1.29e1

VQSLOD
type: SiteQuality
SIO_000300: 4.72e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 7221
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2597
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2512
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 576
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 897
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.287664177182591e-4
allele num: 7766
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58848
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.212486e6

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.217e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e-1

MQ
type: SiteQuality
SIO_000300: 5.045e1

QD
type: SiteQuality
SIO_000300: 1.305e1

MQRankSum
type: SiteQuality
SIO_000300: -2.897e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.53e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2510
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 1
allele frequency: 1.272264631043257e-3
allele num: 786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57434
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.336898395721925e-4
allele num: 7480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6144
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.408e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.66e-1

DP
type: SiteQuality
SIO_000300: 1.146429e6

QD
type: SiteQuality
SIO_000300: 1.799e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14930
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.760811381884773e-5
allele num: 56792
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.899e1

VQSLOD
type: SiteQuality
SIO_000300: -8.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

DP
type: SiteQuality
SIO_000300: 1.135634e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.231e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.385e0

QD
type: SiteQuality
SIO_000300: 1.29e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14918
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9914
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.523608174770965e-5
allele num: 56760
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6066
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.600000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.764e0

VQSLOD
type: SiteQuality
SIO_000300: -4.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.62e0

DP
type: SiteQuality
SIO_000300: 1.134235e6

FS
type: SiteQuality
SIO_000300: 7.893e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7355
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.186748305270064e-4
allele num: 9146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.429142e6

FS
type: SiteQuality
SIO_000300: 2.035e0

QD
type: SiteQuality
SIO_000300: 1.22e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.207e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.94e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3558
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 26929
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9144
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.582729258333069e-5
allele num: 63182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

DP
type: SiteQuality
SIO_000300: 2.441247e6

QD
type: SiteQuality
SIO_000300: 1.072e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 3557
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2545
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variant carriers: 0

GenotypeQuality
all individuals: 4799
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.093613298337708e-4
allele num: 9144
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16220
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

VQSLOD
type: SiteQuality
SIO_000300: 1.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.62e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4280
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GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63182
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.16370808678501e-5
allele num: 16224
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.51e0

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.65e-1

FS
type: SiteQuality
SIO_000300: 5.029e0

MQRankSum
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DP
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.165658931906676e-5
allele num: 63178
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16232
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9140
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.026e0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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DP
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 28

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16240
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 4.432483773943327e-4
allele num: 63170
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.95e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9122
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.583882412569691e-5
allele num: 63136
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 6.333e0

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-2

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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SIO_000300: -1.685e0

DP
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2206
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4767
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26924
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.164468006411046e-5
allele num: 16222
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.091e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.585e0

QD
type: SiteQuality
SIO_000300: 1.407e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 2.441347e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-2

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 57
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3984
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3551
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9107
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26926
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 499
bin: 7.5e0
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.176193836744295e-4
allele num: 8502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63126
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.933e1

FS
type: SiteQuality
SIO_000300: 1.696e0

MQRankSum
type: SiteQuality
SIO_000300: 7.21e-1

DP
type: SiteQuality
SIO_000300: 2.441392e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.02e-1

QD
type: SiteQuality
SIO_000300: 1.257e1

GenotypeQuality
all individuals: 3987
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2205
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.584183511818009e-5
allele num: 63124
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.440575e6

VQSLOD
type: SiteQuality
SIO_000300: -1.272e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.9e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

FS
type: SiteQuality
SIO_000300: 5.928e0

MQRankSum
type: SiteQuality
SIO_000300: 9.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.23e-1

QD
type: SiteQuality
SIO_000300: 1.898e1

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3550
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3982
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26929
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 4280
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16220
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.764241893076249e-5
allele num: 11410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.109069015780468e-4
allele num: 63116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.225e1

DP
type: SiteQuality
SIO_000300: 2.440364e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

MQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.132e0

VQSLOD
type: SiteQuality
SIO_000300: 2.67e0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 5

GenotypeQuality
all individuals: 127
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 32235
bin: 9.75e1
variant carriers: 15688

GenotypeQuality
all individuals: 120
bin: 2.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2074
bin: 7.25e1
variant carriers: 21

GenotypeQuality
all individuals: 2794
bin: 9.25e1
variant carriers: 49

GenotypeQuality
all individuals: 1678
bin: 8.75e1
variant carriers: 20

Other
type: Population
allele count: 122
allele frequency: 1.402298850574713e-1
allele num: 870
num of homozygotes: 14

South Asian
type: Population
allele count: 2596
allele frequency: 1.602469135802469e-1
allele num: 16200
num of homozygotes: 238

African
type: Population
allele count: 2446
allele frequency: 2.691461267605634e-1
allele num: 9088
num of homozygotes: 330

Latino
type: Population
allele count: 2514
allele frequency: 2.204103103629668e-1
allele num: 11406
num of homozygotes: 292

East Asian
type: Population
allele count: 1832
allele frequency: 2.158341187558907e-1
allele num: 8488
num of homozygotes: 201

European (Non-Finnish)
type: Population
allele count: 7743
allele frequency: 1.227800329823671e-1
allele num: 63064
num of homozygotes: 574

European (Finnish)
type: Population
allele count: 297
allele frequency: 4.498636776734323e-2
allele num: 6602
num of homozygotes: 5

VQSLOD
type: SiteQuality
SIO_000300: 4.39e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.34e-2

FS
type: SiteQuality
SIO_000300: 1.249e0

DP
type: SiteQuality
SIO_000300: 2.705258e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.31e-1

QD
type: SiteQuality
SIO_000300: 1.59e1

GenotypeQuality
all individuals: 327
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3786
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.102535832414554e-4
allele num: 9070
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63042
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16182
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.232e0

DP
type: SiteQuality
SIO_000300: 2.337064e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.395e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

FS
type: SiteQuality
SIO_000300: 1.307e0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22071
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4450
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9066
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.172488182481521e-5
allele num: 63042
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.49e-1

FS
type: SiteQuality
SIO_000300: 2.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

DP
type: SiteQuality
SIO_000300: 2.335856e6

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.58e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

MQRankSum
type: SiteQuality
SIO_000300: 8.87e-1

QD
type: SiteQuality
SIO_000300: 1.386e1

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9141
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4763
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22055
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2799
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3782
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.535234503888758e-4
allele num: 8486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62998
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.782715615668365e-5
allele num: 11386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9060
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16178
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.9e-2

QD
type: SiteQuality
SIO_000300: 1.351e1

MQ
type: SiteQuality
SIO_000300: 5.915e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.78e-1

FS
type: SiteQuality
SIO_000300: 5.225e0

DP
type: SiteQuality
SIO_000300: 2.324823e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.61e-2

GenotypeQuality
all individuals: 357
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 879
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4421
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2724
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2276
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9046
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.589117721840834e-5
allele num: 62928
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16170
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.113e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.45e-2

QD
type: SiteQuality
SIO_000300: 1.276e1

VQSLOD
type: SiteQuality
SIO_000300: 8.92e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

DP
type: SiteQuality
SIO_000300: 2.31544e6

MQ
type: SiteQuality
SIO_000300: 5.949e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.289e0

GenotypeQuality
all individuals: 2725
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5039
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2274
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4715
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3775
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.588461416272199e-5
allele num: 62954
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9052
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16174
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.51e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.542e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.33e-1

DP
type: SiteQuality
SIO_000300: 2.314259e6

QD
type: SiteQuality
SIO_000300: 1.34e1

MQRankSum
type: SiteQuality
SIO_000300: 6.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.74e-1

GenotypeQuality
all individuals: 153
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4975
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2705
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4420
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9048
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.178134435086604e-5
allele num: 62930
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.13e0

VQSLOD
type: SiteQuality
SIO_000300: -1.032e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.18e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.30894e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

QD
type: SiteQuality
SIO_000300: 1.402e1

GenotypeQuality
all individuals: 3943
bin: 8.25e1
variant carriers: 11

GenotypeQuality
all individuals: 197
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 24935
bin: 9.75e1
variant carriers: 5654

GenotypeQuality
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bin: 5.75e1
variant carriers: 9

GenotypeQuality
all individuals: 6584
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2059
bin: 8.75e1
variant carriers: 16

GenotypeQuality
all individuals: 3393
bin: 9.25e1
variant carriers: 17

South Asian
type: Population
allele count: 2
allele frequency: 1.237930180737806e-4
allele num: 16156
num of homozygotes: 0

African
type: Population
allele count: 134
allele frequency: 1.483285366393624e-2
allele num: 9034
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 308
allele frequency: 4.662428095670602e-2
allele num: 6606
num of homozygotes: 3

Latino
type: Population
allele count: 187
allele frequency: 1.645257786380433e-2
allele num: 11366
num of homozygotes: 0

Other
type: Population
allele count: 27
allele frequency: 3.110599078341014e-2
allele num: 868
num of homozygotes: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.180080245456691e-4
allele num: 8474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5329
allele frequency: 8.479187881873727e-2
allele num: 62848
num of homozygotes: 261

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.97e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.311187e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

FS
type: SiteQuality
SIO_000300: 7.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.57e0

QD
type: SiteQuality
SIO_000300: 1.719e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66094
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.216989168796398e-4
allele num: 16434
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.95e-1

DP
type: SiteQuality
SIO_000300: 2.36465e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
type: SiteQuality
SIO_000300: -1.308e0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

QD
type: SiteQuality
SIO_000300: 1.825e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.047e0

GenotypeQuality
all individuals: 127
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.963093835885355e-4
allele num: 10188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512813530604218e-5
allele num: 66102
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.821e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 2.366175e6

MQ
type: SiteQuality
SIO_000300: 5.921e1

QD
type: SiteQuality
SIO_000300: 1.384e1

MQRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

GenotypeQuality
all individuals: 3748
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.024803387779794e-5
allele num: 66120
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.080000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.283e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.308e1

VQSLOD
type: SiteQuality
SIO_000300: 7.47e-1

MQ
type: SiteQuality
SIO_000300: 5.929e1

DP
type: SiteQuality
SIO_000300: 2.369852e6

GenotypeQuality
all individuals: 139
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512035805007863e-5
allele num: 66136
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.984e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

QD
type: SiteQuality
SIO_000300: 1.576e1

DP
type: SiteQuality
SIO_000300: 2.371723e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e-1

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.801999607920016e-5
allele num: 10202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 1.449e1

VQSLOD
type: SiteQuality
SIO_000300: -4.781e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

FS
type: SiteQuality
SIO_000300: 3.161e0

DP
type: SiteQuality
SIO_000300: 2.378225e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.359e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

GenotypeQuality
all individuals: 137
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.758e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.651e0

DP
type: SiteQuality
SIO_000300: 2.381816e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.796e0

QD
type: SiteQuality
SIO_000300: 9.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.943e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
all individuals: 4332
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.817396426467701e-5
allele num: 10186
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 280
allele frequency: 1.695941853422168e-2
allele num: 16510
num of homozygotes: 6

Other
type: Population
allele count: 3
allele frequency: 3.36322869955157e-3
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.813017465401583e-4
allele num: 66188
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.79e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 5.659999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.397193e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.89e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.662e0

QD
type: SiteQuality
SIO_000300: 1.202e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.15e-1

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.385054e6

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.523e0

QD
type: SiteQuality
SIO_000300: 9.359999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.273e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

FS
type: SiteQuality
SIO_000300: 2.757e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66144
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.11e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 6.85e0

DP
type: SiteQuality
SIO_000300: 2.384919e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 8.179e0

MQRankSum
type: SiteQuality
SIO_000300: 8.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.73e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.361e0

GenotypeQuality
all individuals: 3720
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512584704743466e-5
allele num: 66112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 1.392e0

MQRankSum
type: SiteQuality
SIO_000300: -3.53e-1

DP
type: SiteQuality
SIO_000300: 2.384331e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.682e0

VQSLOD
type: SiteQuality
SIO_000300: -4.097e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.272e0

QD
type: SiteQuality
SIO_000300: 7.23e0

GenotypeQuality
all individuals: 3774
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66108
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.081e0

DP
type: SiteQuality
SIO_000300: 2.384227e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.155e1

VQSLOD
type: SiteQuality
SIO_000300: 8.59e-1

FS
type: SiteQuality
SIO_000300: 2.475e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.86e-1

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10018
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

FS
type: SiteQuality
SIO_000300: 2.817e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 8.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.33e1

DP
type: SiteQuality
SIO_000300: 2.37605e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.16e-1

GenotypeQuality
all individuals: 1113
bin: 2.25e1
variant carriers: 0

Other
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.522440777053773e-5
allele num: 65684
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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QD
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MQ
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VQSLOD
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FS
type: SiteQuality
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ReadPosRankSum
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DP
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.526437904506045e-5
allele num: 65512
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Latino
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InbreedingCoeff
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MQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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FS
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VQSLOD
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BaseQRankSum
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QD
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DP
type: SiteQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 2

Other
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South Asian
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East Asian
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allele num: 8628
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 8.221993833504625e-4
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European (Non-Finnish)
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allele frequency: 5.679899296920574e-4
allele num: 65142
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Latino
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allele frequency: 1.731002250302925e-4
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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QD
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MQ
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VQSLOD
type: SiteQuality
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FS
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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Latino
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allele frequency: 8.655011251514626e-5
allele num: 11554
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.070215836173283e-5
allele num: 65142
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South Asian
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
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VQSLOD
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FS
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ReadPosRankSum
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MQRankSum
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DP
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QD
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GenotypeQuality
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variant carriers: 0

South Asian
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East Asian
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African
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Latino
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Other
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European (Non-Finnish)
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allele frequency: 3.06119325313007e-5
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European (Finnish)
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allele frequency: 0.0e0
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VQSLOD
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MQ
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FS
type: SiteQuality
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ReadPosRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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DP
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 14
allele frequency: 2.142835277191049e-4
allele num: 65334
num of homozygotes: 0

South Asian
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QD
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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FS
type: SiteQuality
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MQRankSum
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MQ
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DP
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ClippingRankSum
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.062880945817636e-5
allele num: 65298
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Other
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African
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Latino
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South Asian
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allele frequency: 6.062810719049351e-5
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VQSLOD
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QD
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BaseQRankSum
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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DP
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ClippingRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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South Asian
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Other
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European (Non-Finnish)
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allele frequency: 3.064007108496492e-5
allele num: 65274
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East Asian
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African
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Latino
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allele frequency: 1.730403183941858e-4
allele num: 11558
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ClippingRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQRankSum
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FS
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MQ
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VQSLOD
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GenotypeQuality
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variant carriers: 0

Other
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Latino
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allele frequency: 2.595604775912787e-4
allele num: 11558
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European (Finnish)
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South Asian
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European (Non-Finnish)
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African
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East Asian
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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ReadPosRankSum
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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Latino
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Other
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African
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European (Non-Finnish)
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East Asian
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South Asian
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MQRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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DP
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MQ
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InbreedingCoeff
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FS
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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bin: 6.25e1
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Latino
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African
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Other
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South Asian
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MQRankSum
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BaseQRankSum
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VQSLOD
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DP
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FS
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MQ
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InbreedingCoeff
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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South Asian
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European (Finnish)
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African
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European (Non-Finnish)
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allele frequency: 1.381978993919292e-4
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Latino
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East Asian
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Other
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DP
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MQRankSum
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BaseQRankSum
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VQSLOD
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FS
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MQ
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QD
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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African
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East Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Other
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ClippingRankSum
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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DP
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QD
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VQSLOD
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European (Non-Finnish)
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Other
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South Asian
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European (Finnish)
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East Asian
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Latino
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African
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FS
type: SiteQuality
SIO_000300: 3.118e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.3e-2

QD
type: SiteQuality
SIO_000300: 6.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.22e-1

DP
type: SiteQuality
SIO_000300: 2.354804e6

MQ
type: SiteQuality
SIO_000300: 5.028e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.925e0

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.09e-1

GenotypeQuality
all individuals: 3744
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.542543345468008e-5
allele num: 64828
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.726e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.38e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
type: SiteQuality
SIO_000300: 1.26e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.063e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.61e-1

DP
type: SiteQuality
SIO_000300: 2.354071e6

GenotypeQuality
all individuals: 619
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6176
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20659
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16105
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 342
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2560
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9120
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.748906386701662e-5
allele num: 11430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.553e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

QD
type: SiteQuality
SIO_000300: 1.642e1

VQSLOD
type: SiteQuality
SIO_000300: -2.85e-2

DP
type: SiteQuality
SIO_000300: 2.038772e6

MQRankSum
type: SiteQuality
SIO_000300: -1.117e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.19e0

GenotypeQuality
all individuals: 498
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1607
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21204
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16103
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 937
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 924
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.38895987733197e-5
allele num: 62608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14722
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.041e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.441e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

DP
type: SiteQuality
SIO_000300: 2.039868e6

MQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.347e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 933
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2524
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.790710308298248e-5
allele num: 14726
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.033e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.697e0

QD
type: SiteQuality
SIO_000300: 8.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.642e0

MQRankSum
type: SiteQuality
SIO_000300: 6.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.13e0

FS
type: SiteQuality
SIO_000300: 2.927e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

DP
type: SiteQuality
SIO_000300: 2.040249e6

GenotypeQuality
all individuals: 92
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6236
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16100
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1149
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.984414423046214e-5
allele num: 62622
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.750371270419872e-5
allele num: 14814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9126
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.393e1

DP
type: SiteQuality
SIO_000300: 2.047947e6

FS
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.976e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

GenotypeQuality
all individuals: 2245
bin: 7.75e1
variant carriers: 18

GenotypeQuality
all individuals: 701
bin: 3.25e1
variant carriers: 11

GenotypeQuality
all individuals: 72
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 24

GenotypeQuality
all individuals: 18936
bin: 9.75e1
variant carriers: 7743

GenotypeQuality
all individuals: 1243
bin: 9.25e1
variant carriers: 25

GenotypeQuality
all individuals: 574
bin: 3.75e1
variant carriers: 12

Latino
type: Population
allele count: 362
allele frequency: 3.165996151827882e-2
allele num: 11434
num of homozygotes: 4

Other
type: Population
allele count: 68
allele frequency: 7.925407925407925e-2
allele num: 858
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 3554
allele frequency: 5.669527486201065e-2
allele num: 62686
num of homozygotes: 109

East Asian
type: Population
allele count: 1543
allele frequency: 1.817004239284032e-1
allele num: 8492
num of homozygotes: 148

European (Finnish)
type: Population
allele count: 341
allele frequency: 5.160411622276029e-2
allele num: 6608
num of homozygotes: 5

African
type: Population
allele count: 129
allele frequency: 1.41416356062267e-2
allele num: 9122
num of homozygotes: 2

South Asian
type: Population
allele count: 2426
allele frequency: 1.613246442346057e-1
allele num: 15038
num of homozygotes: 223

FS
type: SiteQuality
SIO_000300: 7.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.71e-1

QD
type: SiteQuality
SIO_000300: 1.552e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.44e-2

DP
type: SiteQuality
SIO_000300: 2.155286e6

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
all individuals: 765
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7106
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12271
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26106
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1721
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62702
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.095770326539557e-4
allele num: 9126
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15082
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-1

QD
type: SiteQuality
SIO_000300: 1.244e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.02e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.969922e6

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.52e0

GenotypeQuality
all individuals: 681
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2089
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7136
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1719
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1339
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.434765973727841e-4
allele num: 62728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9128
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.506e0

QD
type: SiteQuality
SIO_000300: 1.301e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

DP
type: SiteQuality
SIO_000300: 1.974551e6

FS
type: SiteQuality
SIO_000300: 1.459e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e-1

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27053
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12268
bin: 9.75e1
variant carriers: 23

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15226
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.119951040391676e-4
allele num: 11438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.389676597100526e-4
allele num: 62770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.095290251916758e-4
allele num: 9130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.979467e6

MQRankSum
type: SiteQuality
SIO_000300: -2.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.459e0

QD
type: SiteQuality
SIO_000300: 1.346e1

FS
type: SiteQuality
SIO_000300: 1.396e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQ
type: SiteQuality
SIO_000300: 5.958e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.3e-1

GenotypeQuality
all individuals: 1710
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12341
bin: 9.75e1
variant carriers: 426

GenotypeQuality
all individuals: 2566
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27284
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 376
allele frequency: 5.98554554427075e-3
allele num: 62818
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.165501165501166e-3
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15302
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.742787200559538e-5
allele num: 11438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 42
allele frequency: 6.354009077155824e-3
allele num: 6610
num of homozygotes: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.174536058256989e-4
allele num: 8514
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 7.663674184366105e-4
allele num: 9134
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.97e-1

DP
type: SiteQuality
SIO_000300: 1.993368e6

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.62e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

FS
type: SiteQuality
SIO_000300: 6.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.21e-1

QD
type: SiteQuality
SIO_000300: 1.404e1

GenotypeQuality
all individuals: 27284
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2566
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.094810597766586e-4
allele num: 9134
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.62e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.97e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 6.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

DP
type: SiteQuality
SIO_000300: 1.993368e6

QD
type: SiteQuality
SIO_000300: 1.404e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.21e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591748376416656e-5
allele num: 62824
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e0

QD
type: SiteQuality
SIO_000300: 1.328e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e0

FS
type: SiteQuality
SIO_000300: 3.085e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

DP
type: SiteQuality
SIO_000300: 1.974106e6

VQSLOD
type: SiteQuality
SIO_000300: -8.164e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.48e-1

GenotypeQuality
all individuals: 678
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11954
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 344
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.590634344976777e-5
allele num: 62868
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.980183e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQ
type: SiteQuality
SIO_000300: 5.902e1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.128e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.996e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.91e-1

QD
type: SiteQuality
SIO_000300: 3.093e1

GenotypeQuality
all individuals: 7391
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2146
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.175308798780681e-5
allele num: 62986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15732
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.573e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

QD
type: SiteQuality
SIO_000300: 3.046e1

VQSLOD
type: SiteQuality
SIO_000300: 8.04e-1

FS
type: SiteQuality
SIO_000300: 1.241e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

DP
type: SiteQuality
SIO_000300: 1.991597e6

GenotypeQuality
all individuals: 401
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1344
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.282196255811031e-5
allele num: 15918
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9152
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.271e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.912e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.886e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 1.997685e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.985e0

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

QD
type: SiteQuality
SIO_000300: 1.387e1

GenotypeQuality
all individuals: 29204
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11962
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 673
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GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1347
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2654
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.583481124904991e-5
allele num: 63152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15970
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9152
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.699999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.94e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

DP
type: SiteQuality
SIO_000300: 2.00015e6

VQSLOD
type: SiteQuality
SIO_000300: 2.31e-1

GenotypeQuality
all individuals: 2658
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 1348
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
all individuals: 330
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1771
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.730574471800244e-5
allele num: 11454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9152
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16012
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.748638723565911e-5
allele num: 63176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.262e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.001014e6

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1350
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2669
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7512
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63232
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.173708920187793e-4
allele num: 8520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.850000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.572e0

DP
type: SiteQuality
SIO_000300: 2.004438e6

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 1.7356e1

MQRankSum
type: SiteQuality
SIO_000300: 3.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.308e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.83e-1

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 1350
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16166
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5803280761086e-5
allele num: 63278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.00585e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-2

MQ
type: SiteQuality
SIO_000300: 5.808e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.52e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.141e0

QD
type: SiteQuality
SIO_000300: 1.031e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 29585
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GenotypeQuality
all individuals: 212
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GenotypeQuality
all individuals: 11964
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variant carriers: 4

GenotypeQuality
all individuals: 7526
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GenotypeQuality
all individuals: 2673
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9160
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63286
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.491620111731844e-4
allele num: 11456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.222e1

FS
type: SiteQuality
SIO_000300: 2.177e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

VQSLOD
type: SiteQuality
SIO_000300: 9.04e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQ
type: SiteQuality
SIO_000300: 5.947e1

DP
type: SiteQuality
SIO_000300: 2.006323e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.46e-1