7-102580048-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102580048
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102580048
    reference: chr 7
allele count: 1
allele frequency: 8.397292712829384e-6
allele num: 119086
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-7668A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.295+16T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-7668A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-7668A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-7668A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-13227A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-7668A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.928+16T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-7668A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.928+16T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-7668A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-7668A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-7668A>G
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4629
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

7-102580052-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102580052
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102580052
    reference: chr 7
allele count: 1
allele frequency: 8.413825598223e-6
allele num: 118852
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-7672G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-7672G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-7672G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-7672G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-7672G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-7672G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.928+20C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-7672G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-7672G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-7672G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.295+20C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-13231G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.928+20C>T
  variant of: http://identifiers.org/hgnc/16895
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/7-102580054-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102580054
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102580054
    reference: chr 7
allele count: 1
allele frequency: 8.415949908266146e-6
allele num: 118822
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-7674G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-13233G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-7674G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-7674G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-7674G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-7674G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.928+22C>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-7674G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-7674G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.928+22C>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.295+22C>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-7674G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-7674G>T
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21109
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

7-102580058-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102580058
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102580058
    reference: chr 7
allele count: 1
allele frequency: 8.439530762089629e-6
allele num: 118490
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-7678T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.295+26A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-7678T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-7678T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-7678T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-7678T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-7678T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-7678T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.928+26A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-7678T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-7678T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-13237T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.928+26A>G
  variant of: http://identifiers.org/hgnc/16895
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2940
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

7-102580059-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102580059
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102580059
    reference: chr 7
allele count: 1
allele frequency: 8.44095551616443e-6
allele num: 118470
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.295+27A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-7679T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.928+27A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-13238T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-7679T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-7679T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-7679T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-7679T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-7679T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.928+27A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-7679T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-7679T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-7679T>C
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13747
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

7-102580066-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102580066
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102580066
    reference: chr 7
allele count: 1
allele frequency: 8.475725522104692e-6
allele num: 117984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-7686C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-7686C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-7686C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-7686C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.295+34G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-7686C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.928+34G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-7686C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-13245C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-7686C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.928+34G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-7686C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-7686C>T
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

7-102580076-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102580076
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102580076
    reference: chr 7
allele count: 1
allele frequency: 8.541606163623007e-6
allele num: 117074
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-13255A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-7696A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-7696A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.295+44T>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-7696A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-7696A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-7696A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-7696A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-7696A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.928+44T>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-7696A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.928+44T>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-7696A>T
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

7-102580077-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102580077
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102580077
    reference: chr 7
allele count: 2
allele frequency: 1.708175327115575e-5
allele num: 117084
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.928+45G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-7697C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.928+45G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-7697C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-7697C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-7697C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-7697C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.295+45G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-7697C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-7697C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-7697C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-13256C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-7697C>T
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

7-102580078-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102580078
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102580078
    reference: chr 7
allele count: 2
allele frequency: 1.709167977028783e-5
allele num: 117016
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-7698A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-7698A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-7698A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-7698A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.928+46T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-7698A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-7698A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-7698A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-7698A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-13257A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.295+46T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-7698A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.928+46T>C
  variant of: http://identifiers.org/hgnc/16895
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

7-102580080-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102580080
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102580081
    reference: chr 7
allele count: 2
allele frequency: 1.71503052754339e-5
allele num: 116616
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-7701dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.928+55dupT
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-7701dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.295+55dupT
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-7701dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.928+55dupT
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-13260dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-7701dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-7701dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-7701dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-7701dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-7701dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-7701dupA
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

7-102580082-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102580082
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102580082
    reference: chr 7
allele count: 1
allele frequency: 8.569420878537029e-6
allele num: 116694
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.928+50T>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-7702A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-7702A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-7702A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.928+50T>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.295+50T>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-7702A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-7702A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-7702A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-7702A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-13261A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-7702A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-7702A>C
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1916
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

7-102582698-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582698
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582698
    reference: chr 7
allele count: 2
allele frequency: 1.652619401751776e-5
allele num: 121020
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10318G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10318G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10318G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10318G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.296-39C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10318G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.929-39C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10318G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10318G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15877G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10318G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1959C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10318G>A
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

7-102582710-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582710
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582710
    reference: chr 7
allele count: 113
allele frequency: 9.33251845856527e-4
allele num: 121082
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10330A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.296-27T>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10330A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15889A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1947T>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10330A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10330A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10330A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.929-27T>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10330A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10330A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10330A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10330A>C
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35319
  bin: 9.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 2
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

7-102582722-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582722
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582722
    reference: chr 7
allele count: 13
allele frequency: 1.073067652788325e-4
allele num: 121148
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10342A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10342A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1935T>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.929-15T>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15901A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.296-15T>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10342A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10342A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10342A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10342A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10342A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10342A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10342A>T
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

7-102582731-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582731
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582731
    reference: chr 7
allele count: 52
allele frequency: 4.290783067909894e-4
allele num: 121190
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10351A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10351A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10351A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.929-6T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.296-6T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10351A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10351A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1926T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15910A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10351A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10351A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10351A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10351A>G
  variant of: http://identifiers.org/hgnc/21658
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2933
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35334
  bin: 9.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.296-6T>C
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

7-102582739-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582739
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582739
    reference: chr 7
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10359A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10359A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10359A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.298T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10359A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10359A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10359A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10359A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15918A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10359A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.931T>C
  hgvsp: ENSP00000249377.4:p.Ser311Pro
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10359A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1918T>C
  variant of: http://identifiers.org/hgnc/16895
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser311Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

7-102582740-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582740
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582740
    reference: chr 7
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10360G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10360G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10360G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10360G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.932C>T
  hgvsp: ENSP00000249377.4:p.Ser311Phe
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10360G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10360G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15919G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10360G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1917C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.299C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10360G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10360G>A
  variant of: http://identifiers.org/hgnc/21658
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser311Phe
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

7-102582755-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582755
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582755
    reference: chr 7
allele count: 2
allele frequency: 1.649647800194658e-5
allele num: 121238
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.314C>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10375G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10375G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*5C>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10375G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10375G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15934G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10375G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10375G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10375G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1902C>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10375G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10375G>C
  variant of: http://identifiers.org/hgnc/21658
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35334
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

7-102582758-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582758
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582758
    reference: chr 7
allele count: 4
allele frequency: 3.299241174529858e-5
allele num: 121240
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1899C>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10378G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10378G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*8C>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10378G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10378G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10378G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10378G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15937G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.317C>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10378G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10378G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10378G>C
  variant of: http://identifiers.org/hgnc/21658
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35336
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum

7-102582759-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582759
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582759
    reference: chr 7
allele count: 7
allele frequency: 5.773672055427252e-5
allele num: 121240
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10379T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1898A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.318A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*9A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15938T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10379T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10379T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10379T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10379T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10379T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10379T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10379T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10379T>C
  variant of: http://identifiers.org/hgnc/21658
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35340
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

7-102582771-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582771
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582771
    reference: chr 7
allele count: 159
allele frequency: 1.311448366875619e-3
allele num: 121240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15950C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10391C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10391C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.330G>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1886G>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10391C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10391C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*21G>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10391C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10391C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10391C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10391C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10391C>A
  variant of: http://identifiers.org/hgnc/21658
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35391
  bin: 9.75e1
  variant carriers: 134
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

7-102582771-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582771
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582771
    reference: chr 7
allele count: 7
allele frequency: 5.773672055427252e-5
allele num: 121240
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10391C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.330G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10391C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10391C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10391C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1886G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10391C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*21G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10391C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15950C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10391C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10391C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10391C>T
  variant of: http://identifiers.org/hgnc/21658
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35391
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

7-102582784-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582784
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582784
    reference: chr 7
allele count: 1
allele frequency: 8.25000825000825e-6
allele num: 121212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10404C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10404C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10404C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10404C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10404C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*34G>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.343G>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10404C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10404C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1873G>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10404C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10404C>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15963C>A
  variant of: http://identifiers.org/hgnc/21658
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

7-102582790-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582790
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582790
    reference: chr 7
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1867G>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10410C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*39+1G>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10410C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10410C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10410C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10410C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10410C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10410C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10410C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10410C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.348+1G>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15969C>G
  variant of: http://identifiers.org/hgnc/21658
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35390
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.348+1G>C
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

7-102582792-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582792
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582792
    reference: chr 7
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*39+3A>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10412T>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15971T>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1865A>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10412T>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10412T>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.348+3A>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10412T>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10412T>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10412T>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10412T>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10412T>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10412T>A
  variant of: http://identifiers.org/hgnc/21658
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35390
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: n.348+3A>T
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

7-102582797-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582797
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582797
    reference: chr 7
allele count: 3
allele frequency: 2.475043313257982e-5
allele num: 121210
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10417A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1860T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.348+8T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10417A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10417A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10417A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10417A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*39+8T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10417A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10417A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15976A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10417A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10417A>G
  variant of: http://identifiers.org/hgnc/21658
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35391
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: n.348+8T>C
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

7-102582801-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102582801
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102582801
    reference: chr 7
allele count: 1
allele frequency: 8.251369727374745e-6
allele num: 121192
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-10421T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-10421T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-1856A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-10421T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*39+12A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-10421T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-10421T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-10421T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-10421T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-10421T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-10421T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-15980T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.348+12A>G
  variant of: http://identifiers.org/hgnc/16895
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35391
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

7-102584607-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584607
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584607
    reference: chr 7
allele count: 1
allele frequency: 9.199632014719412e-6
allele num: 108700
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12227G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12227G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.349-50C>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12227G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*40-50C>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12227G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17786G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12227G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12227G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12227G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12227G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12227G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-50C>G
  variant of: http://identifiers.org/hgnc/16895
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD

7-102584607-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584607
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584607
    reference: chr 7
allele count: 1
allele frequency: 9.199632014719412e-6
allele num: 108700
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12227G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12227G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12227G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12227G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12227G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12227G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17786G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12227G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*40-50C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.349-50C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12227G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12227G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-50C>T
  variant of: http://identifiers.org/hgnc/16895
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

7-102584608-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584608
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584608
    reference: chr 7
allele count: 3
allele frequency: 2.759483424702895e-5
allele num: 108716
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12228T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12228T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12228T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*40-49A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12228T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12228T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17787T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12228T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12228T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.349-49A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-49A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12228T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12228T>C
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

7-102584611-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584611
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584611
    reference: chr 7
allele count: 1
allele frequency: 9.19777046044039e-6
allele num: 108722
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17790C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12231C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12231C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12231C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12231C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.349-46G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12231C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12231C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12231C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-46G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12231C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12231C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*40-46G>A
  variant of: http://identifiers.org/hgnc/16895
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

7-102584613-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584613
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584613
    reference: chr 7
allele count: 1
allele frequency: 9.194218675296973e-6
allele num: 108764
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12233T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12233T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-44A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12233T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12233T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12233T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12233T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12233T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.349-44A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12233T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17792T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12233T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*40-44A>G
  variant of: http://identifiers.org/hgnc/16895
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10936
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

7-102584622-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584622
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584622
    reference: chr 7
allele count: 2
allele frequency: 1.836749687752553e-5
allele num: 108888
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12242T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12242T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*40-35A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12242T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.349-35A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-35A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12242T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12242T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12242T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12242T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12242T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12242T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17801T>C
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8568
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

7-102584642-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584642
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584641
    reference: chr 7
allele count: 5
allele frequency: 4.55622380171314e-5
allele num: 109740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12263delA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12263delA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12263delA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.349-11delT
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17822delA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12263delA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*40-11delT
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12263delA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12263delA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12263delA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12263delA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12263delA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-11delT
  variant of: http://identifiers.org/hgnc/16895
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: AT
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

7-102584647-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584647
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584647
    reference: chr 7
allele count: 2
allele frequency: 1.818909381934592e-5
allele num: 109956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12267G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12267G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12267G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12267G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12267G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12267G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17826G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*40-10C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12267G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12267G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12267G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.929-10C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.349-10C>T
  variant of: http://identifiers.org/hgnc/16895
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

7-102584658-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584658
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584658
    reference: chr 7
allele count: 2
allele frequency: 1.791183793369038e-5
allele num: 111658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12278G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12278G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12278G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.350C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12278G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.930C>T
  hgvsp: ENST00000339431.4:c.930C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17837G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12278G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*41C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12278G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12278G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12278G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12278G>A
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10983
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.930C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

7-102584659-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584659
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584659
    reference: chr 7
allele count: 4
allele frequency: 3.568306303413085e-5
allele num: 112098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*42G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17838C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12279C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12279C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.931G>A
  hgvsp: ENSP00000344242.4:p.Ala311Thr
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12279C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12279C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12279C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12279C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12279C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.351G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12279C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12279C>T
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4056
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala311Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

7-102584673-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584673
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584673
    reference: chr 7
allele count: 2
allele frequency: 1.747396379394702e-5
allele num: 114456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12293G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12293G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17852G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.365C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12293G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12293G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12293G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*56C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12293G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.945C>T
  hgvsp: ENST00000339431.4:c.945C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12293G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12293G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12293G>A
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28423
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3086
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu315Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

7-102584674-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584674
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584674
    reference: chr 7
allele count: 1
allele frequency: 8.717027842186928e-6
allele num: 114718
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.366A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*57A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.946A>G
  hgvsp: ENSP00000344242.4:p.Thr316Ala
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12294T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12294T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12294T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17853T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12294T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12294T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12294T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12294T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12294T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12294T>C
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10998
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr316Ala
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/7-102584703-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584703
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584703
    reference: chr 7
allele count: 3
allele frequency: 2.507564486200037e-5
allele num: 119638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12323G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12323G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12323G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12323G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.395C>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12323G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.975C>A
  hgvsp: ENSP00000344242.4:p.Asn325Lys
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17882G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12323G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12323G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*86C>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12323G>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12323G>T
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn325Lys
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

7-102584706-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584706
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584706
    reference: chr 7
allele count: 1
allele frequency: 8.339588024351597e-6
allele num: 119910
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12326G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12326G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12326G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12326G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*89C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.978C>T
  hgvsp: ENST00000339431.4:c.978C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.398C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12326G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12326G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12326G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17885G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12326G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12326G>A
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13743
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn326Asn
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

7-102584712-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584712
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584712
    reference: chr 7
allele count: 1
allele frequency: 8.306475728477921e-6
allele num: 120388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.404G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12332C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12332C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12332C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12332C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12332C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12332C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12332C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12332C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12332C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.984G>A
  hgvsp: ENST00000339431.4:c.984G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*95G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17891C>T
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11116
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu328Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/7-102584714-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584714
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584714
    reference: chr 7
allele count: 1
allele frequency: 8.296827293243064e-6
allele num: 120528
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12334T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17893T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12334T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12334T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.406A>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12334T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.986A>C
  hgvsp: ENSP00000344242.4:p.Gln329Pro
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12334T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*97A>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12334T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12334T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12334T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12334T>G
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29289
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln329Pro
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

7-102584718-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584718
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584719
    reference: chr 7
allele count: 2
allele frequency: 1.657412778652524e-5
allele num: 120670
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12339dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12339dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12339dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12339dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12339dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.993dupT
  hgvsp: ENSP00000344242.4:p.Asp332Ter
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.413dupT
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*104dupT
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12339dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12339dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12339dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17898dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12339dupA
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp332Ter
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

7-102584718-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584718
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584718
    reference: chr 7
allele count: 4
allele frequency: 3.314825557305047e-5
allele num: 120670
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*101C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12338G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.410C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.990C>T
  hgvsp: ENST00000339431.4:c.990C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12338G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17897G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12338G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12338G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12338G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12338G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12338G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12338G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12338G>A
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11151
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn330Asn
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

7-102584720-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584720
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584720
    reference: chr 7
allele count: 2
allele frequency: 1.656506758547575e-5
allele num: 120736
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*103T>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12340A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12340A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12340A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.992T>G
  hgvsp: ENSP00000344242.4:p.Phe331Cys
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12340A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12340A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12340A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17899A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.412T>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12340A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12340A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12340A>C
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe331Cys
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS

7-102584724-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584724
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584724
    reference: chr 7
allele count: 5
allele frequency: 4.137702747434624e-5
allele num: 120840
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12344G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.416C>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12344G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12344G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12344G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12344G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*107C>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17903G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12344G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.996C>G
  hgvsp: ENSP00000344242.4:p.Asp332Glu
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12344G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12344G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12344G>C
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14069
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp332Glu
num of homozygotes: 1
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

7-102584727-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584727
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584727
    reference: chr 7
allele count: 1
allele frequency: 8.271024945411235e-6
allele num: 120904
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12347A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12347A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.999T>C
  hgvsp: ENST00000339431.4:c.999T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12347A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12347A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*110T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12347A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12347A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.419T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17906A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12347A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12347A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12347A>G
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr333Tyr
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

7-102584730-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584730
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584730
    reference: chr 7
allele count: 3
allele frequency: 2.479912707072711e-5
allele num: 120972
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*113C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12350G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12350G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12350G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12350G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17909G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.422C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12350G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1002C>T
  hgvsp: ENST00000339431.4:c.1002C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12350G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12350G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12350G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12350G>A
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29442
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly334Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

7-102584731-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584731
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584731
    reference: chr 7
allele count: 2
allele frequency: 1.652346331791144e-5
allele num: 121040
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12351C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12351C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12351C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12351C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*114G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1003G>A
  hgvsp: ENSP00000344242.4:p.Val335Ile
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12351C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.423G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12351C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12351C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12351C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17910C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12351C>T
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val335Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

7-102584731-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584731
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584731
    reference: chr 7
allele count: 1
allele frequency: 8.261731658955718e-6
allele num: 121040
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12351C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12351C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12351C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1003G>C
  hgvsp: ENSP00000344242.4:p.Val335Leu
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12351C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12351C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12351C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*114G>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.423G>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12351C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17910C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12351C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12351C>G
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val335Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff

7-102584734-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584734
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584734
    reference: chr 7
allele count: 1
allele frequency: 8.258865892535638e-6
allele num: 121082
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*117T>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12354A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.426T>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12354A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12354A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12354A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1006T>G
  hgvsp: ENSP00000344242.4:p.Leu336Val
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12354A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12354A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12354A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12354A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12354A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17913A>C
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu336Val
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ

7-102584736-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584736
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584736
    reference: chr 7
allele count: 1
allele frequency: 8.257365570088519e-6
allele num: 121104
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12356T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17915T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12356T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*119A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12356T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12356T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12356T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12356T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12356T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1008A>G
  hgvsp: ENST00000339431.4:c.1008A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12356T>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.428A>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12356T>C
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu336Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

7-102584739-AGAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584739
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584736
    reference: chr 7
allele count: 1
allele frequency: 8.253140319891718e-6
allele num: 121166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*123_*125delGAC
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.432_434delGAC
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12362_725-12360delGTC
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12362_725-12360delGTC
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17921_300-17919delGTC
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12362_725-12360delGTC
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12362_725-12360delGTC
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1012_1014delGAC
  hgvsp: ENSP00000344242.4:p.Asp338del
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12362_995-12360delGTC
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12362_725-12360delGTC
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12362_725-12360delGTC
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12362_725-12360delGTC
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12362_725-12360delGTC
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp338del
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: AGAC
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

7-102584748-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584748
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584748
    reference: chr 7
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12368A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12368A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1020T>G
  hgvsp: ENSP00000344242.4:p.Tyr340Ter
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*131T>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17927A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12368A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.440T>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12368A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12368A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12368A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12368A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12368A>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12368A>C
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr340Ter
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

7-102584752-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584752
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584752
    reference: chr 7
allele count: 6
allele frequency: 4.948453608247422e-5
allele num: 121250
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12372A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12372A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12372A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1024T>C
  hgvsp: ENST00000339431.4:c.1024T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12372A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12372A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.444T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12372A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*135T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12372A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12372A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17931A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12372A>G
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29515
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11169
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu342Leu
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ

7-102584759-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584759
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584759
    reference: chr 7
allele count: 1
allele frequency: 8.242664029014178e-6
allele num: 121320
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12379A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12379A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12379A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12379A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1031T>C
  hgvsp: ENSP00000344242.4:p.Leu344Pro
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12379A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17938A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12379A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12379A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.451T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12379A>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*142T>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12379A>G
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu344Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

7-102584760-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584760
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584760
    reference: chr 7
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1032C>G
  hgvsp: ENST00000339431.4:c.1032C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12380G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12380G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12380G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.452C>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12380G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12380G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12380G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*143C>G
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12380G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12380G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17939G>C
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12380G>C
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29520
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14239
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu344Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

7-102584784-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584784
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584784
    reference: chr 7
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12404C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12404C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12404C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1056G>A
  hgvsp: ENSP00000344242.4:p.Trp352Ter
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12404C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17963C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12404C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12404C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*167G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12404C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12404C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12404C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.476G>A
  variant of: http://identifiers.org/hgnc/16895
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp352Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP

7-102584789-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584789
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584789
    reference: chr 7
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12409C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12409C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.481G>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12409C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1061G>C
  hgvsp: ENSP00000344242.4:p.Cys354Ser
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12409C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12409C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*172G>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12409C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12409C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17968C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12409C>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12409C>G
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys354Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

7-102584790-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584790
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584790
    reference: chr 7
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.482T>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12410A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17969A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12410A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1062T>A
  hgvsp: ENSP00000344242.4:p.Cys354Ter
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12410A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12410A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12410A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12410A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12410A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12410A>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*173T>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12410A>T
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys354Ter
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum

7-102584808-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584808
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584808
    reference: chr 7
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.500C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12428G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1080C>T
  hgvsp: ENST00000339431.4:c.1080C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12428G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12428G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*191C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12428G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12428G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12428G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17987G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12428G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12428G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12428G>A
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14229
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr360Tyr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-102584817-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584817
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584817
    reference: chr 7
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12437G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*200C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12437G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-17996G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12437G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12437G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12437G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.509C>T
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1089C>T
  hgvsp: ENST00000339431.4:c.1089C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12437G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12437G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12437G>A
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12437G>A
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr363Tyr
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/7-102584824-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584824
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584824
    reference: chr 7
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.516A>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-18003T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12444T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12444T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12444T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1096A>C
  hgvsp: ENSP00000344242.4:p.Lys366Gln
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12444T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*207A>C
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12444T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12444T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12444T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12444T>G
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12444T>G
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys366Gln
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

7-102584843-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584843
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584844
    reference: chr 7
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: AT
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1119dupT
  hgvsp: ENSP00000344242.4:p.Asn374Ter
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12464dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-18023dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12464dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12464dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12464dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12464dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*230dupT
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.539dupT
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12464dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12464dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12464dupA
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12464dupA
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn374Ter
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

7-102584857-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102584857
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 102584857
    reference: chr 7
allele count: 3
allele frequency: 2.471576866040534e-5
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000391550
  ensembl transcript: ENST00000455112
  gene symbol: FBXL13
  hgvsc: ENST00000455112.2:c.725-12477C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128606
  ensembl transcript: ENST00000485478
  gene symbol: LRRC17
  hgvsc: ENST00000485478.1:n.549G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368608
  ensembl transcript: ENST00000379306
  gene symbol: FBXL13
  hgvsc: ENST00000379306.3:c.725-12477C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000405434
  ensembl transcript: ENST00000448002
  gene symbol: FBXL13
  hgvsc: ENST00000448002.2:c.995-12477C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000249377
  ensembl transcript: ENST00000249377
  gene symbol: LRRC17
  hgvsc: ENST00000249377.4:c.*240G>A
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368610
  ensembl transcript: ENST00000379308
  gene symbol: FBXL13
  hgvsc: ENST00000379308.3:c.725-12477C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000409716
  ensembl transcript: ENST00000456695
  gene symbol: FBXL13
  hgvsc: ENST00000456695.1:c.725-12477C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128606
  ensembl protein: ENSP00000344242
  ensembl transcript: ENST00000339431
  gene symbol: LRRC17
  hgvsc: ENST00000339431.4:c.1129G>A
  hgvsp: ENSP00000344242.4:p.Glu377Lys
  variant of: http://identifiers.org/hgnc/16895
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000368607
  ensembl transcript: ENST00000379305
  gene symbol: FBXL13
  hgvsc: ENST00000379305.3:c.725-12477C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000377367
  ensembl transcript: ENST00000393772
  gene symbol: FBXL13
  hgvsc: ENST00000393772.2:c.725-12477C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl transcript: ENST00000477915
  gene symbol: FBXL13
  hgvsc: ENST00000477915.1:n.300-18036C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000388608
  ensembl transcript: ENST00000436908
  gene symbol: FBXL13
  hgvsc: ENST00000436908.1:c.725-12477C>T
  variant of: http://identifiers.org/hgnc/21658
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161040
  ensembl protein: ENSP00000321927
  ensembl transcript: ENST00000313221
  gene symbol: FBXL13
  hgvsc: ENST00000313221.4:c.725-12477C>T
  variant of: http://identifiers.org/hgnc/21658
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11183
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu377Lys
num of homozygotes: 0
population: European (Non-Finnish)
reference allele: G

GenotypeDepth
all individuals: 509
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 300
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2331
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2816
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2438
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5182
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7143
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4225
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21574
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10053
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3542
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447535e-5
allele num: 66140
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.38e1

DP
type: SiteQuality
SIO_000300: 1.774389e6

MQRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.465e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.17e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.75e-1

GenotypeDepth
all individuals: 187
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4628
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 300
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3539
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21184
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7123
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5182
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2593
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2816
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10055
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4223
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512950859356088e-5
allele num: 66096
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.86e-1

FS
type: SiteQuality
SIO_000300: 6.685e0

MQRankSum
type: SiteQuality
SIO_000300: 6.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.89e-1

DP
type: SiteQuality
SIO_000300: 1.769901e6

QD
type: SiteQuality
SIO_000300: 1.042e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.28e-1

GenotypeDepth
all individuals: 584
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2332
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 148
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10056
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7115
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21025
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2684
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2816
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3539
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4224
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66096
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14680
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.631e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.45e-1

FS
type: SiteQuality
SIO_000300: 7.283e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e0

VQSLOD
type: SiteQuality
SIO_000300: 1.13e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.64e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

DP
type: SiteQuality
SIO_000300: 1.767432e6

QD
type: SiteQuality
SIO_000300: 1.342e1

GenotypeDepth
all individuals: 509
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 148
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 251
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5178
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4223
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10056
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3535
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20426
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2698
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2816
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7087
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514692517418964e-5
allele num: 66020
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.212e1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.216e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.761013e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.36e0

GenotypeDepth
all individuals: 188
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20644
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 301
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10057
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4223
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3534
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7090
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5178
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2816
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2711
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20458
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66018
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.760976e6

VQSLOD
type: SiteQuality
SIO_000300: 2.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.81e-1

FS
type: SiteQuality
SIO_000300: 5.5e0

QD
type: SiteQuality
SIO_000300: 1.283e1

MQRankSum
type: SiteQuality
SIO_000300: 1.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 114
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 188
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1310
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19952
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7065
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2640
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5176
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10056
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3531
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2815
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4221
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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allele num: 65892
num of homozygotes: 0

East Asian
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Other
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South Asian
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QD
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MQ
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FS
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VQSLOD
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MQRankSum
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ClippingRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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QD
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BaseQRankSum
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VQSLOD
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MQ
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DP
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FS
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 65682
num of homozygotes: 0

African
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Other
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East Asian
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European (Finnish)
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num of homozygotes: 0

South Asian
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MQ
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BaseQRankSum
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QD
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VQSLOD
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DP
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FS
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.522811719558994e-5
allele num: 65668
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele num: 11538
num of homozygotes: 0

East Asian
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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ReadPosRankSum
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BaseQRankSum
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FS
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DP
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VQSLOD
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MQ
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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Other
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European (Non-Finnish)
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South Asian
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FS
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
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MQ
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ReadPosRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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Latino
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European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
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DP
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QD
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BaseQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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MQRankSum
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ClippingRankSum
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FS
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QD
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DP
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ReadPosRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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Other
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East Asian
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allele frequency: 1.215559157212318e-2
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African
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allele frequency: 2.887391722810395e-4
allele num: 10390
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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VQSLOD
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ClippingRankSum
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FS
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DP
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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allele frequency: 1.800666246511209e-4
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African
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Latino
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European (Finnish)
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Other
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East Asian
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BaseQRankSum
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VQSLOD
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DP
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ClippingRankSum
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MQRankSum
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FS
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MQ
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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Other
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African
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European (Finnish)
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MQ
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BaseQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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FS
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VQSLOD
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MQRankSum
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QD
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
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Latino
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African
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Other
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European (Finnish)
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ReadPosRankSum
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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QD
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MQ
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ClippingRankSum
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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South Asian
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Other
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European (Finnish)
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European (Non-Finnish)
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African
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ClippingRankSum
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FS
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MQ
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VQSLOD
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DP
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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DP
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MQ
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FS
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MQRankSum
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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European (Finnish)
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East Asian
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European (Non-Finnish)
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African
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VQSLOD
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InbreedingCoeff
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DP
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MQRankSum
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QD
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ReadPosRankSum
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FS
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MQ
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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East Asian
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allele frequency: 8.094357076780758e-4
allele num: 8648
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
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BaseQRankSum
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SIO_000300: -2.55e-1

MQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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QD
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SIO_000300: 1.177e1

ClippingRankSum
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SIO_000300: 1.05e-1

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele frequency: 1.480484522207268e-2
allele num: 10402
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

Latino
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allele frequency: 3.456022118541559e-4
allele num: 11574
num of homozygotes: 0

Other
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South Asian
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QD
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FS
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: 8.129999999999999e-1

MQ
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SIO_000300: 5.964e1

DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 3
allele frequency: 2.592016588906169e-4
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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European (Non-Finnish)
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allele num: 66682
num of homozygotes: 0

East Asian
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Other
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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DP
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BaseQRankSum
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FS
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QD
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SIO_000300: 1.251e1

VQSLOD
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SIO_000300: 5.78e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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African
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
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QD
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SIO_000300: 1.248e1

MQRankSum
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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FS
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InbreedingCoeff
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SIO_000300: 0.0e0

DP
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SIO_000300: 6.248219e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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allele frequency: 6.098304671301378e-5
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BaseQRankSum
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MQ
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MQRankSum
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DP
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ClippingRankSum
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VQSLOD
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FS
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QD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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African
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European (Finnish)
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European (Non-Finnish)
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East Asian
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South Asian
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ClippingRankSum
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VQSLOD
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DP
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QD
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FS
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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European (Non-Finnish)
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Latino
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Other
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European (Finnish)
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DP
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BaseQRankSum
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VQSLOD
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QD
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MQRankSum
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MQ
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InbreedingCoeff
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FS
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.105006105006105e-5
allele num: 16380
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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DP
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SIO_000300: 6.247161e6

InbreedingCoeff
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FS
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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MQ
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

South Asian
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allele frequency: 1.072961373390558e-4
allele num: 9320
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African
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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European (Non-Finnish)
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Latino
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InbreedingCoeff
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MQ
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ReadPosRankSum
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DP
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ClippingRankSum
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MQRankSum
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VQSLOD
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FS
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62888
num of homozygotes: 0

African
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num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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East Asian
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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DP
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MQRankSum
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FS
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QD
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 3
allele frequency: 3.252385082393755e-4
allele num: 9224
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62894
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
type: Population
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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MQ
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SIO_000300: 6.0e1

ClippingRankSum
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BaseQRankSum
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QD
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FS
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MQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
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allele frequency: 8.739730816290858e-5
allele num: 11442
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 62902
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South Asian
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Other
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ReadPosRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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QD
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ClippingRankSum
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MQRankSum
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MQ
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VQSLOD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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European (Non-Finnish)
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allele frequency: 1.589218740067383e-5
allele num: 62924
num of homozygotes: 0

Other
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ClippingRankSum
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DP
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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FS
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MQRankSum
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QD
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ReadPosRankSum
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MQ
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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South Asian
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African
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Other
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European (Non-Finnish)
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European (Finnish)
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FS
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DP
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ReadPosRankSum
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VQSLOD
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MQRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 4.359958144401814e-4
allele num: 11468
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 63328
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 6.011e1

ReadPosRankSum
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InbreedingCoeff
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SIO_000300: 2.5e-3

MQRankSum
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FS
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ClippingRankSum
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DP
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BaseQRankSum
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QD
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63416
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.143622722400857e-4
allele num: 9330
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: -3.0e-4

MQRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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FS
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ClippingRankSum
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QD
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VQSLOD
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MQ
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SIO_000300: 5.974e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.123243175713661e-5
allele num: 64036
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

South Asian
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QD
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SIO_000300: 1.215e1

VQSLOD
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BaseQRankSum
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DP
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InbreedingCoeff
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MQRankSum
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MQ
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ClippingRankSum
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SIO_000300: 7.51e-1

FS
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SIO_000300: 3.145e0

ReadPosRankSum
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SIO_000300: 1.0e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.672606068157747e-5
allele num: 64204
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.169317118802619e-4
allele num: 8552
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.16e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

DP
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SIO_000300: 1.661259e6

ClippingRankSum
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SIO_000300: -2.84e-1

FS
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InbreedingCoeff
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

BaseQRankSum
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SIO_000300: 1.73e0

MQRankSum
type: SiteQuality
SIO_000300: 9.429999999999999e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.076544425301501e-5
allele num: 65008
num of homozygotes: 0

East Asian
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Other
type: Population
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African
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

FS
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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MQ
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SIO_000300: 5.986e1

DP
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QD
type: SiteQuality
SIO_000300: 1.132e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12382
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 65098
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DP
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MQRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 2.592464569650881e-4
allele num: 11572
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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FS
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BaseQRankSum
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MQ
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DP
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VQSLOD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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South Asian
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European (Non-Finnish)
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DP
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MQRankSum
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FS
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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Other
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Latino
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African
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East Asian
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MQ
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DP
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BaseQRankSum
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QD
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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allele num: 66588
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European (Finnish)
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East Asian
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African
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South Asian
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Latino
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ClippingRankSum
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QD
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FS
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MQ
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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East Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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FS
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DP
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BaseQRankSum
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Latino
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East Asian
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Other
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FS
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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MQ
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ReadPosRankSum
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DP
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Finnish)
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Latino
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European (Non-Finnish)
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African
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South Asian
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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QD
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MQ
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DP
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InbreedingCoeff
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ReadPosRankSum
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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European (Finnish)
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East Asian
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European (Non-Finnish)
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MQ
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SIO_000300: 5.982e1

QD
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VQSLOD
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SIO_000300: -4.422e-1

MQRankSum
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SIO_000300: 8.120000000000001e-1

FS
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: -9.66e-1

ReadPosRankSum
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SIO_000300: 1.04e0

DP
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SIO_000300: 1.742569e6

BaseQRankSum
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SIO_000300: 1.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.742969e6

FS
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MQ
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SIO_000300: 6.0e1

BaseQRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -1.0e-4

MQRankSum
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SIO_000300: 1.38e0

ReadPosRankSum
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SIO_000300: 1.36e0

VQSLOD
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SIO_000300: 3.09e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 1.820830298616169e-4
allele num: 16476
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: -2.0e-4

VQSLOD
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SIO_000300: 1.09e0

MQRankSum
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MQ
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SIO_000300: 5.98e1

QD
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ClippingRankSum
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SIO_000300: -3.5e-2

ReadPosRankSum
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SIO_000300: 8.78e-1

FS
type: SiteQuality
SIO_000300: 2.423e0

BaseQRankSum
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SIO_000300: -5.86e-1

DP
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SIO_000300: 1.744202e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.999310158663508e-5
allele num: 66682
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
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MQRankSum
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SIO_000300: 1.28e-1

FS
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SIO_000300: 5.22e-1

QD
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SIO_000300: 1.308e1

InbreedingCoeff
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BaseQRankSum
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MQ
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DP
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SIO_000300: 1.74468e6

VQSLOD
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SIO_000300: 1.56e0

ClippingRankSum
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SIO_000300: 5.580000000000001e-1

ReadPosRankSum
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SIO_000300: -9.0e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

Latino
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allele count: 1
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allele num: 11576
num of homozygotes: 0

African
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Other
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South Asian
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQ
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QD
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DP
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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African
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East Asian
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European (Non-Finnish)
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allele num: 66688
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European (Finnish)
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Other
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MQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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FS
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VQSLOD
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InbreedingCoeff
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QD
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BaseQRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Latino
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South Asian
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African
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Other
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East Asian
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European (Non-Finnish)
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ClippingRankSum
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DP
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BaseQRankSum
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FS
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MQ
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
type: Population
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allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

East Asian
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num of homozygotes: 0

Latino
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allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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DP
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SIO_000300: 1.745531e6

VQSLOD
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MQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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MQ
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BaseQRankSum
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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MQ
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DP
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VQSLOD
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FS
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BaseQRankSum
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QD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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SIO_000300: 9.8e-2

ClippingRankSum
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SIO_000300: 5.51e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 5.99592277251469e-5
allele num: 66712
num of homozygotes: 0

South Asian
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BaseQRankSum
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QD
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FS
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SIO_000300: 1.102e0

VQSLOD
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ClippingRankSum
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SIO_000300: -5.2e-1

ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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SIO_000300: 3.13e-1

DP
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SIO_000300: 1.746598e6

MQ
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SIO_000300: 5.975e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

African
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allele count: 0
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num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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FS
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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DP
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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MQ
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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Other
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East Asian
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DP
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InbreedingCoeff
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FS
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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QD
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66726
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East Asian
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European (Finnish)
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African
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South Asian
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Other
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Latino
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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VQSLOD
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MQ
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FS
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MQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Latino
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DP
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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QD
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ClippingRankSum
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MQ
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FS
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

Other
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South Asian
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European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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InbreedingCoeff
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ClippingRankSum
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MQ
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ReadPosRankSum
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DP
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QD
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BaseQRankSum
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VQSLOD
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FS
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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Other
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European (Non-Finnish)
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African
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InbreedingCoeff
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ClippingRankSum
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MQ
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FS
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QD
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DP
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VQSLOD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Other
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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ClippingRankSum
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QD
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DP
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ReadPosRankSum
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VQSLOD
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MQ
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BaseQRankSum
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FS
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MQRankSum
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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South Asian
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InbreedingCoeff
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BaseQRankSum
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MQ
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ReadPosRankSum
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FS
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DP
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QD
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VQSLOD
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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South Asian
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East Asian
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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MQ
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DP
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
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