9-131777193-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131777193
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131777191
    reference: chr 9
allele count: 1
allele frequency: 8.401384548173538e-6
allele num: 119028
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-12_476-11delCT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.*76-12_*76-11delCT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.*63-12_*63-11delCT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-12_64-11delCT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-12_335-11delCT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-12_335-11delCT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-12_335-11delCT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-12_335-11delCT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-12_335-11delCT
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4613
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5709
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5050
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5363
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: CAG
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ

9-131777204-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131777204
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131777204
    reference: chr 9
allele count: 1
allele frequency: 8.47860001356576e-6
allele num: 117944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-21G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-21G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-21G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.*76-21G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.*63-21G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-21G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-21G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-21G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-21G>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4608
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2665
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5703
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5366
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5851
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD

9-131777205-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131777205
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131777205
    reference: chr 9
allele count: 2
allele frequency: 1.692018747567723e-5
allele num: 118202
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.*76-22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.*63-22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-22C>T
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5600
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4805
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2793
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ

9-131777205-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131777205
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131777205
    reference: chr 9
allele count: 1427
allele frequency: 1.20725537638957e-2
allele num: 118202
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-22C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-22C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-22C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-22C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-22C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-22C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-22C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.*63-22C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.*76-22C>G
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 3.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 4.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5600
  bin: 6.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 5.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 5.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 4.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 4805
  bin: 7.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 8.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 9.75e1
  variant carriers: 564
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 9.25e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 2.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 7.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 6.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 8.75e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49909
  bin: 9.75e1
  variant carriers: 1336
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 85
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

9-131777205-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131777205
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131777206
    reference: chr 9
allele count: 3334
allele frequency: 2.820595252195394e-2
allele num: 118202
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-23dupA
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-23dupA
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-23dupA
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-23dupA
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.*63-23dupA
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.*76-23dupA
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-23dupA
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-23dupA
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-23dupA
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4805
  bin: 7.25e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 5452
  bin: 6.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 8.25e1
  variant carriers: 142
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 9.25e1
  variant carriers: 213
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2706
  bin: 1.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 5.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 3.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 4.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 7.75e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 5600
  bin: 6.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 2.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 9.75e1
  variant carriers: 2151
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 8.75e1
  variant carriers: 192
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 5.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 3360
  bin: 4.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 8.25e1
  variant carriers: 1
num of homozygotes: 79
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

9-131777209-GGAA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131777209
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131777206
    reference: chr 9
allele count: 1
allele frequency: 8.476443962228966e-6
allele num: 117974
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-29_335-27delTTC
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-29_335-27delTTC
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-29_335-27delTTC
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-29_335-27delTTC
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.*76-29_*76-27delTTC
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.*63-29_*63-27delTTC
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-29_476-27delTTC
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-29_64-27delTTC
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-29_335-27delTTC
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5728
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4605
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5904
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 924
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: GGAA
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

9-131777214-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131777214
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131777214
    reference: chr 9
allele count: 1
allele frequency: 8.495021917156547e-6
allele num: 117716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-31T>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-31T>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-31T>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-31T>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.*63-31T>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.*76-31T>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-31T>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-31T>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-31T>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4605
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5728
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49227
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD

9-131777219-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131777219
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131777219
    reference: chr 9
allele count: 1
allele frequency: 8.551540132377842e-6
allele num: 116938
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-36G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-36G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-36G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.*76-36G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-36G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-36G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-36G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-36G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.*63-36G>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4126
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4605
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5728
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5077
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2440
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

9-131777225-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131777225
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131777225
    reference: chr 9
allele count: 8
allele frequency: 6.861769650392837e-5
allele num: 116588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.*76-42G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-42G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-42G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-42G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-42G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-42G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-42G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-42G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.*63-42G>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4605
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2394
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 1
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

9-131777227-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131777227
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131777227
    reference: chr 9
allele count: 1
allele frequency: 8.590032126720154e-6
allele num: 116414
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-44C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-44C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-44C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.*63-44C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.*76-44C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-44C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-44C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-44C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-44C>G
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4604
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2713
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5901
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4127
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/9-131778043-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131778043
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131778043
    reference: chr 9
allele count: 1
allele frequency: 3.232062055591467e-4
allele num: 3094
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-860G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-860G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.*38G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.*51G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-860G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-860G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-860G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-860G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-860G>T
  variant of: http://identifiers.org/hgnc/10834
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2129
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ

9-131778126-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131778126
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131778126
    reference: chr 9
allele count: 4
allele frequency: 5.390835579514825e-4
allele num: 7420
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.352C>T
  hgvsp: ENSP00000400951.1:p.His118Tyr
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.135C>T
  hgvsp: ENST00000425236.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-943C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-943C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-943C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-943C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-943C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-943C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-943C>T
  variant of: http://identifiers.org/hgnc/10834
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2211
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
hgvs: p.His118Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

9-131778132-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131778132
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131778132
    reference: chr 9
allele count: 1
allele frequency: 1.37438152831226e-4
allele num: 7276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-949C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-949C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-949C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.346C>T
  hgvsp: ENST00000416230.1:c.346C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-949C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-949C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-949C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.129C>T
  hgvsp: ENST00000425236.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-949C>T
  variant of: http://identifiers.org/hgnc/10834
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1621
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Cys43Cys
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

9-131778147-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131778147
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131778148
    reference: chr 9
allele count: 1
allele frequency: 1.777461784571632e-4
allele num: 5626
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-965dupT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-965dupT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-965dupT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.122-9dupT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-965dupT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-965dupT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-965dupT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.335-5dupT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-965dupT
  variant of: http://identifiers.org/hgnc/10834
canonical: false
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3016
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 6.25e1
  variant carriers: 0
hgvs: c.335-5dupT
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

9-131778151-AAAAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131778151
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131778146
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 6130
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-973_335-969delCTTTT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.335-13_335-9delCTTTT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-973_335-969delCTTTT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.122-17_122-13delCTTTT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-973_335-969delCTTTT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-973_335-969delCTTTT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-973_335-969delCTTTT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-973_64-969delCTTTT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-973_476-969delCTTTT
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: AAAAAG
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

9-131778181-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131778181
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131778181
    reference: chr 9
allele count: 1
allele frequency: 5.208333333333333e-4
allele num: 1920
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.335-998C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.335-38C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-998C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.476-998C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.335-998C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.335-998C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.122-42C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.335-998C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.335-998C>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

9-131783325-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783325
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783325
    reference: chr 9
allele count: 1
allele frequency: 8.634683797879321e-6
allele num: 115812
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.334+45C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.334+45C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6142C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.334+45C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.334+45C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.475+45C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.334+45C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.121+45C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.334+45C>T
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37404
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1359
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/9-131783335-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783335
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783335
    reference: chr 9
allele count: 2
allele frequency: 1.722445183182045e-5
allele num: 116114
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.121+35T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.334+35T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6152T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.334+35T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.334+35T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.334+35T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.475+35T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.334+35T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.334+35T>G
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2282
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8343
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

9-131783335-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783335
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783335
    reference: chr 9
allele count: 10
allele frequency: 8.612225915910226e-5
allele num: 116114
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.121+35T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6152T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.334+35T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.334+35T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.475+35T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.334+35T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.334+35T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.334+35T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.334+35T>C
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8870
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28340
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38440
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/9-131783339-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783339
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783339
    reference: chr 9
allele count: 1
allele frequency: 8.614748449345278e-6
allele num: 116080
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.334+31G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.334+31G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.334+31G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6156G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.334+31G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.121+31G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.475+31G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.334+31G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.334+31G>T
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8874
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28416
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1255
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38615
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP

9-131783350-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783350
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783350
    reference: chr 9
allele count: 2
allele frequency: 1.71503052754339e-5
allele num: 116616
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.334+20A>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.334+20A>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.334+20A>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6167A>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.334+20A>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.475+20A>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.334+20A>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.334+20A>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.121+20A>G
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15533
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

9-131783357-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783357
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783357
    reference: chr 9
allele count: 1
allele frequency: 8.548615979072987e-6
allele num: 116978
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.334+13C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.334+13C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.334+13C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.334+13C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6174C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.334+13C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.121+13C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.475+13C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.334+13C>G
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8846
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40214
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

9-131783372-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783372
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783372
    reference: chr 9
allele count: 1
allele frequency: 8.491703605577351e-6
allele num: 117762
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.332A>G
  hgvsp: ENSP00000361640.1:p.Tyr111Cys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.473A>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.332A>G
  hgvsp: ENSP00000402566.1:p.Tyr111Cys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.332A>G
  hgvsp: ENSP00000400951.1:p.Tyr111Cys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.332A>G
  hgvsp: ENSP00000361634.4:p.Tyr111Cys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.119A>G
  hgvsp: ENSP00000403228.1:p.Tyr40Cys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6189A>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.332A>G
  hgvsp: ENSP00000361645.3:p.Tyr111Cys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.332A>G
  hgvsp: ENSP00000388282.1:p.Tyr111Cys
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Tyr111Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD

9-131783374-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783374
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783374
    reference: chr 9
allele count: 1
allele frequency: 8.488964346349745e-6
allele num: 117800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.330C>T
  hgvsp: ENST00000372559.1:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.117C>T
  hgvsp: ENST00000425236.1:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.330C>T
  hgvsp: ENST00000416629.1:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.330C>T
  hgvsp: ENST00000372554.4:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.330C>T
  hgvsp: ENST00000416230.1:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.471C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.330C>T
  hgvsp: ENST00000417224.1:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.330C>T
  hgvsp: ENST00000372564.3:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6191C>T
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro110Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

9-131783375-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783375
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783375
    reference: chr 9
allele count: 1
allele frequency: 8.483779014524229e-6
allele num: 117872
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.329C>G
  hgvsp: ENSP00000361645.3:p.Pro110Arg
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.329C>G
  hgvsp: ENSP00000388282.1:p.Pro110Arg
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.470C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.329C>G
  hgvsp: ENSP00000402566.1:p.Pro110Arg
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6192C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.329C>G
  hgvsp: ENSP00000361634.4:p.Pro110Arg
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.329C>G
  hgvsp: ENSP00000400951.1:p.Pro110Arg
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.329C>G
  hgvsp: ENSP00000361640.1:p.Pro110Arg
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.116C>G
  hgvsp: ENSP00000403228.1:p.Pro39Arg
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40171
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro110Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

9-131783375-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783375
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783375
    reference: chr 9
allele count: 6
allele frequency: 5.090267408714538e-5
allele num: 117872
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.329C>A
  hgvsp: ENSP00000361645.3:p.Pro110His
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.470C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.329C>A
  hgvsp: ENSP00000361640.1:p.Pro110His
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.329C>A
  hgvsp: ENSP00000361634.4:p.Pro110His
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.329C>A
  hgvsp: ENSP00000402566.1:p.Pro110His
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.116C>A
  hgvsp: ENSP00000403228.1:p.Pro39His
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.329C>A
  hgvsp: ENSP00000388282.1:p.Pro110His
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.329C>A
  hgvsp: ENSP00000400951.1:p.Pro110His
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6192C>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28538
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8136
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro110His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

9-131783384-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783384
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783384
    reference: chr 9
allele count: 7
allele frequency: 5.914460009801105e-5
allele num: 118354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.320C>T
  hgvsp: ENSP00000400951.1:p.Pro107Leu
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.461C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.320C>T
  hgvsp: ENSP00000402566.1:p.Pro107Leu
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.320C>T
  hgvsp: ENSP00000361645.3:p.Pro107Leu
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.320C>T
  hgvsp: ENSP00000388282.1:p.Pro107Leu
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.320C>T
  hgvsp: ENSP00000361634.4:p.Pro107Leu
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.320C>T
  hgvsp: ENSP00000361640.1:p.Pro107Leu
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6201C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.107C>T
  hgvsp: ENSP00000403228.1:p.Pro36Leu
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28204
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17917
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8034
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2225
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro107Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum

http://identifiers.org/exac.variant/9-131783392-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783392
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783392
    reference: chr 9
allele count: 1
allele frequency: 8.435259384226064e-6
allele num: 118550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.312G>T
  hgvsp: ENSP00000400951.1:p.Glu104Asp
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.312G>T
  hgvsp: ENSP00000402566.1:p.Glu104Asp
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.312G>T
  hgvsp: ENSP00000388282.1:p.Glu104Asp
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.99G>T
  hgvsp: ENSP00000403228.1:p.Glu33Asp
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.453G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.312G>T
  hgvsp: ENSP00000361634.4:p.Glu104Asp
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.312G>T
  hgvsp: ENSP00000361640.1:p.Glu104Asp
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6209G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.312G>T
  hgvsp: ENSP00000361645.3:p.Glu104Asp
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27722
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu104Asp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

9-131783396-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783396
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783396
    reference: chr 9
allele count: 1
allele frequency: 8.457517887650332e-6
allele num: 118238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.308G>A
  hgvsp: ENSP00000361634.4:p.Ser103Asn
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.308G>A
  hgvsp: ENSP00000402566.1:p.Ser103Asn
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.308G>A
  hgvsp: ENSP00000400951.1:p.Ser103Asn
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.308G>A
  hgvsp: ENSP00000361640.1:p.Ser103Asn
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.308G>A
  hgvsp: ENSP00000388282.1:p.Ser103Asn
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.95G>A
  hgvsp: ENSP00000403228.1:p.Ser32Asn
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6213G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.308G>A
  hgvsp: ENSP00000361645.3:p.Ser103Asn
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.449G>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser103Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

9-131783398-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783398
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783398
    reference: chr 9
allele count: 2
allele frequency: 1.689274794330794e-5
allele num: 118394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.93C>G
  hgvsp: ENST00000425236.1:c.93C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.447C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.306C>G
  hgvsp: ENST00000372554.4:c.306C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.306C>G
  hgvsp: ENST00000416629.1:c.306C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.306C>G
  hgvsp: ENST00000417224.1:c.306C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.306C>G
  hgvsp: ENST00000416230.1:c.306C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.306C>G
  hgvsp: ENST00000372564.3:c.306C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.306C>G
  hgvsp: ENST00000372559.1:c.306C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6215C>G
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27145
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala102Ala
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

9-131783401-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783401
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783401
    reference: chr 9
allele count: 3
allele frequency: 2.533655389085013e-5
allele num: 118406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.303G>A
  hgvsp: ENST00000416230.1:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.303G>A
  hgvsp: ENST00000372564.3:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.303G>A
  hgvsp: ENST00000372554.4:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.303G>A
  hgvsp: ENST00000372559.1:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6218G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.303G>A
  hgvsp: ENST00000417224.1:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.444G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.303G>A
  hgvsp: ENST00000416629.1:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.90G>A
  hgvsp: ENST00000425236.1:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7091
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala101Ala
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

9-131783404-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783404
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783404
    reference: chr 9
allele count: 3
allele frequency: 2.53434031121699e-5
allele num: 118374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.87C>T
  hgvsp: ENST00000425236.1:c.87C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.300C>T
  hgvsp: ENST00000372559.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.441C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6221C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.300C>T
  hgvsp: ENST00000372564.3:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.300C>T
  hgvsp: ENST00000372554.4:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.300C>T
  hgvsp: ENST00000416629.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.300C>T
  hgvsp: ENST00000417224.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.300C>T
  hgvsp: ENST00000416230.1:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26680
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6849
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp100Asp
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

9-131783426-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783426
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783426
    reference: chr 9
allele count: 1
allele frequency: 8.553002959339024e-6
allele num: 116918
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.278T>C
  hgvsp: ENSP00000361645.3:p.Leu93Pro
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.65T>C
  hgvsp: ENSP00000403228.1:p.Leu22Pro
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.419T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.278T>C
  hgvsp: ENSP00000400951.1:p.Leu93Pro
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.278T>C
  hgvsp: ENSP00000388282.1:p.Leu93Pro
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.278T>C
  hgvsp: ENSP00000361640.1:p.Leu93Pro
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.278T>C
  hgvsp: ENSP00000361634.4:p.Leu93Pro
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.278T>C
  hgvsp: ENSP00000402566.1:p.Leu93Pro
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6243T>C
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38545
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu93Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

9-131783427-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783427
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783427
    reference: chr 9
allele count: 1
allele frequency: 8.582217645039478e-6
allele num: 116520
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.64C>T
  hgvsp: ENST00000425236.1:c.64C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.277C>T
  hgvsp: ENST00000372564.3:c.277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.277C>T
  hgvsp: ENST00000372554.4:c.277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.277C>T
  hgvsp: ENST00000416230.1:c.277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6244C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.418C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.277C>T
  hgvsp: ENST00000372559.1:c.277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.277C>T
  hgvsp: ENST00000417224.1:c.277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.277C>T
  hgvsp: ENST00000416629.1:c.277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4033
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4867
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6074
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu93Leu
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/9-131783433-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783433
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783433
    reference: chr 9
allele count: 2
allele frequency: 1.731721677691961e-5
allele num: 115492
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.271G>T
  hgvsp: ENSP00000361645.3:p.Gly91Trp
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.58G>T
  hgvsp: ENSP00000403228.1:p.Gly20Trp
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.271G>T
  hgvsp: ENSP00000388282.1:p.Gly91Trp
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.271G>T
  hgvsp: ENSP00000361634.4:p.Gly91Trp
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.271G>T
  hgvsp: ENSP00000402566.1:p.Gly91Trp
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.412G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.271G>T
  hgvsp: ENSP00000361640.1:p.Gly91Trp
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6250G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.271G>T
  hgvsp: ENSP00000400951.1:p.Gly91Trp
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4819
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20557
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22633
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly91Trp
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-131783434-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783434
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783434
    reference: chr 9
allele count: 16
allele frequency: 1.384418371231786e-4
allele num: 115572
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.270C>T
  hgvsp: ENST00000372559.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.270C>T
  hgvsp: ENST00000372554.4:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.57C>T
  hgvsp: ENST00000425236.1:c.57C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.270C>T
  hgvsp: ENST00000416629.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.270C>T
  hgvsp: ENST00000372564.3:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.270C>T
  hgvsp: ENST00000416230.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.270C>T
  hgvsp: ENST00000417224.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6251C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.411C>T
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20670
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22708
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4715
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4599
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1789
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn90Asn
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

9-131783435-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783435
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783435
    reference: chr 9
allele count: 5
allele frequency: 4.341860747842095e-5
allele num: 115158
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.410A>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.269A>G
  hgvsp: ENSP00000361634.4:p.Asn90Ser
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.269A>G
  hgvsp: ENSP00000400951.1:p.Asn90Ser
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.269A>G
  hgvsp: ENSP00000402566.1:p.Asn90Ser
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.269A>G
  hgvsp: ENSP00000361645.3:p.Asn90Ser
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.56A>G
  hgvsp: ENSP00000403228.1:p.Asn19Ser
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.269A>G
  hgvsp: ENSP00000361640.1:p.Asn90Ser
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.269A>G
  hgvsp: ENSP00000388282.1:p.Asn90Ser
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6252A>G
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2962
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20849
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4414
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5033
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asn90Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/9-131783442-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783442
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783442
    reference: chr 9
allele count: 1
allele frequency: 8.723719794120213e-6
allele num: 114630
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.262G>T
  hgvsp: ENSP00000361640.1:p.Val88Phe
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.262G>T
  hgvsp: ENSP00000402566.1:p.Val88Phe
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.262G>T
  hgvsp: ENSP00000388282.1:p.Val88Phe
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.262G>T
  hgvsp: ENSP00000361634.4:p.Val88Phe
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6259G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.49G>T
  hgvsp: ENSP00000403228.1:p.Val17Phe
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.403G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.262G>T
  hgvsp: ENSP00000361645.3:p.Val88Phe
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.262G>T
  hgvsp: ENSP00000400951.1:p.Val88Phe
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4696
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1806
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2006
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val88Phe
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ

9-131783444-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783444
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783444
    reference: chr 9
allele count: 1
allele frequency: 8.75902179244622e-6
allele num: 114168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.401G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.260G>A
  hgvsp: ENSP00000400951.1:p.Arg87Lys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.260G>A
  hgvsp: ENSP00000361645.3:p.Arg87Lys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6261G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.47G>A
  hgvsp: ENSP00000403228.1:p.Arg16Lys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.260G>A
  hgvsp: ENSP00000388282.1:p.Arg87Lys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.260G>A
  hgvsp: ENSP00000361634.4:p.Arg87Lys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.260G>A
  hgvsp: ENSP00000361640.1:p.Arg87Lys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.260G>A
  hgvsp: ENSP00000402566.1:p.Arg87Lys
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg87Lys
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

9-131783450-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783450
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783450
    reference: chr 9
allele count: 1
allele frequency: 8.807623879229862e-6
allele num: 113538
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.254C>T
  hgvsp: ENSP00000402566.1:p.Pro85Leu
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.41C>T
  hgvsp: ENSP00000403228.1:p.Pro14Leu
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.254C>T
  hgvsp: ENSP00000361640.1:p.Pro85Leu
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.254C>T
  hgvsp: ENSP00000388282.1:p.Pro85Leu
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.254C>T
  hgvsp: ENSP00000361645.3:p.Pro85Leu
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6267C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.395C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.254C>T
  hgvsp: ENSP00000361634.4:p.Pro85Leu
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.254C>T
  hgvsp: ENSP00000400951.1:p.Pro85Leu
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4729
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19169
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4665
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro85Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

9-131783452-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783452
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783452
    reference: chr 9
allele count: 1
allele frequency: 8.844861135680169e-6
allele num: 113060
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.39C>T
  hgvsp: ENST00000425236.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.252C>T
  hgvsp: ENST00000372559.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.252C>T
  hgvsp: ENST00000417224.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6269C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.252C>T
  hgvsp: ENST00000372564.3:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.252C>T
  hgvsp: ENST00000416230.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.252C>T
  hgvsp: ENST00000372554.4:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.393C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.252C>T
  hgvsp: ENST00000416629.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22744
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4861
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4458
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1992
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val84Val
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/9-131783453-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783453
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783453
    reference: chr 9
allele count: 1
allele frequency: 8.860849223789609e-6
allele num: 112856
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.251T>G
  hgvsp: ENSP00000361634.4:p.Val84Gly
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.251T>G
  hgvsp: ENSP00000400951.1:p.Val84Gly
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.38T>G
  hgvsp: ENSP00000403228.1:p.Val13Gly
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.251T>G
  hgvsp: ENSP00000402566.1:p.Val84Gly
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.251T>G
  hgvsp: ENSP00000361645.3:p.Val84Gly
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.251T>G
  hgvsp: ENSP00000361640.1:p.Val84Gly
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.251T>G
  hgvsp: ENSP00000388282.1:p.Val84Gly
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6270T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.392T>G
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 18497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4883
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22812
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4394
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val84Gly
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/9-131783463-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783463
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783463
    reference: chr 9
allele count: 1
allele frequency: 8.99005699696136e-6
allele num: 111234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.241G>T
  hgvsp: ENSP00000361634.4:p.Asp81Tyr
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.241G>T
  hgvsp: ENSP00000388282.1:p.Asp81Tyr
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.241G>T
  hgvsp: ENSP00000400951.1:p.Asp81Tyr
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.241G>T
  hgvsp: ENSP00000361640.1:p.Asp81Tyr
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.241G>T
  hgvsp: ENSP00000361645.3:p.Asp81Tyr
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.382G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.241G>T
  hgvsp: ENSP00000402566.1:p.Asp81Tyr
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6280G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.28G>T
  hgvsp: ENSP00000403228.1:p.Asp10Tyr
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4842
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23480
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9229
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp81Tyr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD

9-131783464-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783464
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783464
    reference: chr 9
allele count: 1
allele frequency: 9.005925899241701e-6
allele num: 111038
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6281G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.27G>A
  hgvsp: ENST00000425236.1:c.27G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.240G>A
  hgvsp: ENST00000372564.3:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.240G>A
  hgvsp: ENST00000417224.1:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.240G>A
  hgvsp: ENST00000372559.1:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.240G>A
  hgvsp: ENST00000416230.1:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.240G>A
  hgvsp: ENST00000416629.1:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.240G>A
  hgvsp: ENST00000372554.4:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.381G>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4906
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu80Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP

9-131783474-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783474
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783474
    reference: chr 9
allele count: 9
allele frequency: 8.253094910591472e-5
allele num: 109050
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.230A>G
  hgvsp: ENSP00000388282.1:p.Tyr77Cys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.230A>G
  hgvsp: ENSP00000400951.1:p.Tyr77Cys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.230A>G
  hgvsp: ENSP00000402566.1:p.Tyr77Cys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6291A>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.230A>G
  hgvsp: ENSP00000361634.4:p.Tyr77Cys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.230A>G
  hgvsp: ENSP00000361645.3:p.Tyr77Cys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.230A>G
  hgvsp: ENSP00000361640.1:p.Tyr77Cys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.17A>G
  hgvsp: ENSP00000403228.1:p.Tyr6Cys
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.371A>G
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22931
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5926
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11095
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr77Cys
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

9-131783476-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783476
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783476
    reference: chr 9
allele count: 1
allele frequency: 9.221689413500553e-6
allele num: 108440
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.228G>A
  hgvsp: ENST00000372559.1:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.369G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.228G>A
  hgvsp: ENST00000372554.4:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000403228
  ensembl transcript: ENST00000425236
  gene symbol: SH3GLB2
  hgvsc: ENST00000425236.1:c.15G>A
  hgvsp: ENST00000425236.1:c.15G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.228G>A
  hgvsp: ENST00000417224.1:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.228G>A
  hgvsp: ENST00000416629.1:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.228G>A
  hgvsp: ENST00000372564.3:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.228G>A
  hgvsp: ENST00000416230.1:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6293G>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22744
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32086
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3670
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu76Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD

9-131783492-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783492
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783492
    reference: chr 9
allele count: 3
allele frequency: 2.880682145532062e-5
allele num: 104142
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.212G>A
  hgvsp: ENSP00000361645.3:p.Arg71Gln
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.212G>A
  hgvsp: ENSP00000400951.1:p.Arg71Gln
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.212G>A
  hgvsp: ENSP00000361640.1:p.Arg71Gln
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6309G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.212G>A
  hgvsp: ENSP00000402566.1:p.Arg71Gln
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.212G>A
  hgvsp: ENSP00000388282.1:p.Arg71Gln
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.212G>A
  hgvsp: ENSP00000361634.4:p.Arg71Gln
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.353G>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8022
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12701
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20772
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg71Gln
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

9-131783503-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783503
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783503
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 101114
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.206-5C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.206-5C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.206-5C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.347-5C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.206-5C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.206-5C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.206-5C>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6320C>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11166
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25811
  bin: 6.25e1
  variant carriers: 0
hgvs: c.206-5C>A
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/9-131783510-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783510
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783509
    reference: chr 9
allele count: 2
allele frequency: 2.016779606324621e-5
allele num: 99168
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.206-13delT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6328delT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.206-13delT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.206-13delT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.206-13delT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.347-13delT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.206-13delT
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.206-13delT
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9644
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4469
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4814
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2017
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: CA
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

9-131783515-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783515
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783515
    reference: chr 9
allele count: 9
allele frequency: 9.199255882413067e-5
allele num: 97834
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.206-17C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.206-17C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.347-17C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.206-17C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.206-17C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.206-17C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6332C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.206-17C>G
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13556
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10595
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20194
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4924
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8542
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20964
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1839
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4957
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

9-131783516-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783516
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783516
    reference: chr 9
allele count: 1
allele frequency: 1.025409651155637e-5
allele num: 97522
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.206-18G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.206-18G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.347-18G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.206-18G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.206-18G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.206-18G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.206-18G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6333G>C
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5027
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10708
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21190
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/9-131783524-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783524
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783524
    reference: chr 9
allele count: 1
allele frequency: 1.043950307965341e-5
allele num: 95790
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.206-26T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.206-26T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.206-26T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.206-26T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.206-26T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6341T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.347-26T>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.206-26T>G
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1501
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5876
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13846
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP

9-131783525-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783525
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783525
    reference: chr 9
allele count: 1
allele frequency: 1.048569750859827e-5
allele num: 95368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.206-27G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.206-27G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.206-27G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.206-27G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.206-27G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.206-27G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6342G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.347-27G>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7750
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23394
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3727
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5971
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22052
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1585
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

9-131783543-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783543
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783543
    reference: chr 9
allele count: 1
allele frequency: 1.139159755764148e-5
allele num: 87784
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.347-45C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.206-45C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.206-45C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.206-45C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.206-45C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.206-45C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6360C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.206-45C>T
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22435
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13550
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3406
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3368
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6307
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/9-131783546-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131783546
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131783546
    reference: chr 9
allele count: 1
allele frequency: 1.155081202208515e-5
allele num: 86574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.347-48G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.206-48G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.206-48G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.206-48G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.206-48G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.64-6363G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.206-48G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.206-48G>T
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5259
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2503
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2984
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17778
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6302
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3579
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ

9-131784518-C-CCCACG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784518
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784523
    reference: chr 9
allele count: 5
allele frequency: 4.188657116528441e-5
allele num: 119370
alternate allele: CCCACG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+38_205+42dupCGTGG
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5848_63+5852dupCGTGG
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+38_346+42dupCGTGG
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+38_205+42dupCGTGG
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+38_205+42dupCGTGG
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+38_205+42dupCGTGG
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+38_205+42dupCGTGG
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+38_205+42dupCGTGG
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24583
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18250
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8318
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1413
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1252
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD

9-131784519-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784519
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784519
    reference: chr 9
allele count: 55
allele frequency: 4.607214059541959e-4
allele num: 119378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+42G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5852G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+42G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+42G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+42G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+42G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+42G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+42G>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7882
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24705
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18540
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8295
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1265
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37436
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

9-131784522-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784522
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784522
    reference: chr 9
allele count: 2
allele frequency: 1.675041876046901e-5
allele num: 119400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+39G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5849G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+39G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+39G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+39G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+39G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+39G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+39G>C
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19228
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

9-131784523-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784523
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784523
    reference: chr 9
allele count: 2032
allele frequency: 1.69979254500435e-2
allele num: 119544
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+38C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+38C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+38C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+38C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5848C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+38C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+38C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+38C>T
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 7884
  bin: 3.25e1
  variant carriers: 299
genotype depth: GenotypeDepth
  all individuals: 25058
  bin: 2.75e1
  variant carriers: 285
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.75e1
  variant carriers: 180
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 1.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 3.75e1
  variant carriers: 304
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 1.75e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.25e1
  variant carriers: 238
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 19344
  bin: 2.25e1
  variant carriers: 161
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2030
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 4.25e1
  variant carriers: 2
num of homozygotes: 26
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

9-131784523-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784523
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784523
    reference: chr 9
allele count: 16
allele frequency: 1.338419326775079e-4
allele num: 119544
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+38C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+38C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+38C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+38C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5848C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+38C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+38C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+38C>G
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 19344
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25058
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7884
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD

9-131784524-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784524
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784524
    reference: chr 9
allele count: 1
allele frequency: 8.361204013377926e-6
allele num: 119600
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+37T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+37T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+37T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+37T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+37T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+37T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+37T>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5847T>C
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7888
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2134
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40391
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

9-131784534-TCCCCG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784534
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784529
    reference: chr 9
allele count: 1
allele frequency: 8.344877079960612e-6
allele num: 119834
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+22_205+26delCGGGG
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+22_205+26delCGGGG
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+22_205+26delCGGGG
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+22_205+26delCGGGG
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5832_63+5836delCGGGG
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+22_205+26delCGGGG
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+22_346+26delCGGGG
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+22_205+26delCGGGG
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20486
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8711
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41857
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: TCCCCG
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

9-131784538-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784538
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784538
    reference: chr 9
allele count: 2
allele frequency: 1.667444807576869e-5
allele num: 119944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+23G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+23G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+23G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+23G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+23G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+23G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+23G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5833G>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27113
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20533
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8163
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42379
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

9-131784539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784539
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784539
    reference: chr 9
allele count: 716
allele frequency: 5.964380320876997e-3
allele num: 120046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+22C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5832C>T
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20440
  bin: 2.25e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 8134
  bin: 3.25e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 3.75e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 27203
  bin: 2.75e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 1.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 18
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/9-131784546-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784546
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784546
    reference: chr 9
allele count: 8
allele frequency: 6.646726487205052e-5
allele num: 120360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+15G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+15G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+15G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+15G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5825G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+15G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+15G>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+15G>T
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28004
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20584
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8258
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43737
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

9-131784546-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784546
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784546
    reference: chr 9
allele count: 4
allele frequency: 3.323363243602526e-5
allele num: 120360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+15G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+15G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+15G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+15G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+15G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+15G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5825G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+15G>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28004
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8844
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43737
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

9-131784547-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784547
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784547
    reference: chr 9
allele count: 1
allele frequency: 8.304544246611745e-6
allele num: 120416
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+14C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+14C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+14C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5824C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+14C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+14C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+14C>G
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+14C>G
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

9-131784552-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784552
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784552
    reference: chr 9
allele count: 2
allele frequency: 1.65873239670244e-5
allele num: 120574
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+9G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+9G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+9G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+9G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+9G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+9G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5819G>C
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+9G>C
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20808
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2188
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44367
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1882
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

9-131784552-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784552
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784552
    reference: chr 9
allele count: 2
allele frequency: 1.65873239670244e-5
allele num: 120574
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5819G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+9G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+9G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+9G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+9G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+9G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+9G>A
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+9G>A
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28274
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1882
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44367
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2188
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

9-131784553-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 131784553
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 131784553
    reference: chr 9
allele count: 1
allele frequency: 8.292148993333113e-6
allele num: 120596
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361634
  ensembl transcript: ENST00000372554
  gene symbol: SH3GLB2
  hgvsc: ENST00000372554.4:c.205+8C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361640
  ensembl transcript: ENST00000372559
  gene symbol: SH3GLB2
  hgvsc: ENST00000372559.1:c.205+8C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl transcript: ENST00000483980
  gene symbol: SH3GLB2
  hgvsc: ENST00000483980.1:n.346+8C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000361645
  ensembl transcript: ENST00000372564
  gene symbol: SH3GLB2
  hgvsc: ENST00000372564.3:c.205+8C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000396761
  ensembl transcript: ENST00000455407
  gene symbol: SH3GLB2
  hgvsc: ENST00000455407.1:c.63+5818C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000402566
  ensembl transcript: ENST00000417224
  gene symbol: SH3GLB2
  hgvsc: ENST00000417224.1:c.205+8C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000400951
  ensembl transcript: ENST00000416230
  gene symbol: SH3GLB2
  hgvsc: ENST00000416230.1:c.205+8C>T
  variant of: http://identifiers.org/hgnc/10834
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148341
  ensembl protein: ENSP00000388282
  ensembl transcript: ENST00000416629
  gene symbol: SH3GLB2
  hgvsc: ENST00000416629.1:c.205+8C>T
  variant of: http://identifiers.org/hgnc/10834
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8937
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
hgvs: c.205+8C>T
num of homozygotes: 0
population: African
reference allele: G

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3152
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2459
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49095
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 886
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66026
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14950
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.147e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.37e-1

QD
type: SiteQuality
SIO_000300: 1.144e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.14e0

MQRankSum
type: SiteQuality
SIO_000300: -1.209e0

DP
type: SiteQuality
SIO_000300: 3.761472e6

MQ
type: SiteQuality
SIO_000300: 5.946e1

GenotypeQuality
all individuals: 97
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2762
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49088
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 74
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2092
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521005080156968e-5
allele num: 65746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e0

DP
type: SiteQuality
SIO_000300: 3.749934e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.68e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

GenotypeQuality
all individuals: 705
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49909
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519387383007172e-5
allele num: 65816
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14374
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.38e-1

QD
type: SiteQuality
SIO_000300: 1.484e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.64e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

FS
type: SiteQuality
SIO_000300: 5.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.42e0

DP
type: SiteQuality
SIO_000300: 3.88354e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2793
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2011
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 308
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 455
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 755
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.087101711423403e-4
allele num: 14374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 36
allele frequency: 5.469794578825817e-4
allele num: 65816
num of homozygotes: 0

Latino
type: Population
allele count: 73
allele frequency: 6.328016643550624e-3
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 1306
allele frequency: 1.260131223465843e-1
allele num: 10364
num of homozygotes: 85

Other
type: Population
allele count: 9
allele frequency: 1.022727272727273e-2
allele num: 880
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.38e-1

DP
type: SiteQuality
SIO_000300: 3.88354e6

FS
type: SiteQuality
SIO_000300: 5.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.42e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.64e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.38e-1

QD
type: SiteQuality
SIO_000300: 1.484e1

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 630
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2011
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 88
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 49909
bin: 9.75e1
variant carriers: 3249

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2793
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 46
allele frequency: 4.438440756464685e-3
allele num: 10364
num of homozygotes: 0

Latino
type: Population
allele count: 718
allele frequency: 6.223994452149792e-2
allele num: 11536
num of homozygotes: 23

European (Non-Finnish)
type: Population
allele count: 1300
allele frequency: 1.975203597909323e-2
allele num: 65816
num of homozygotes: 11

South Asian
type: Population
allele count: 52
allele frequency: 3.617642966467233e-3
allele num: 14374
num of homozygotes: 0

East Asian
type: Population
allele count: 884
allele frequency: 1.025522041763341e-1
allele num: 8620
num of homozygotes: 36

Other
type: Population
allele count: 28
allele frequency: 3.181818181818181e-2
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 306
allele frequency: 4.627949183303085e-2
allele num: 6612
num of homozygotes: 9

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.88354e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.38e-1

FS
type: SiteQuality
SIO_000300: 5.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.64e-2

QD
type: SiteQuality
SIO_000300: 1.484e1

GenotypeQuality
all individuals: 1994
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2906
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49228
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521467912241731e-5
allele num: 65726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

MQ
type: SiteQuality
SIO_000300: 5.641e1

QD
type: SiteQuality
SIO_000300: 1.68e1

DP
type: SiteQuality
SIO_000300: 3.72084e6

VQSLOD
type: SiteQuality
SIO_000300: 4.61e0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

GenotypeQuality
all individuals: 748
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2829
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14080
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522858100082234e-5
allele num: 65666
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.97e-1

DP
type: SiteQuality
SIO_000300: 3.716331e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.18e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.055e1

GenotypeQuality
all individuals: 700
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1312
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49225
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527323823196994e-5
allele num: 65474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13522
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.710423e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.789e0

MQRankSum
type: SiteQuality
SIO_000300: -8.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.853e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

QD
type: SiteQuality
SIO_000300: 1.052e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.493e0

GenotypeQuality
all individuals: 191
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49224
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variant carriers: 5

GenotypeQuality
all individuals: 489
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variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 763
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variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
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variant carriers: 1

GenotypeQuality
all individuals: 176
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 879
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 838
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 792
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 6.015942246954429e-4
allele num: 13298
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65374
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.88e-1

DP
type: SiteQuality
SIO_000300: 3.706676e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.283e0

FS
type: SiteQuality
SIO_000300: 8.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.04e0

QD
type: SiteQuality
SIO_000300: 1.275e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 894
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 775
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 686
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variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 763
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variant carriers: 0

GenotypeQuality
all individuals: 573
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variant carriers: 0

GenotypeQuality
all individuals: 218
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variant carriers: 0

GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 49225
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variant carriers: 1

GenotypeQuality
all individuals: 1074
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13160
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.686168151879117e-5
allele num: 10324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

FS
type: SiteQuality
SIO_000300: 1.661e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.582e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

VQSLOD
type: SiteQuality
SIO_000300: -6.968e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

DP
type: SiteQuality
SIO_000300: 3.705211e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.04e-1

QD
type: SiteQuality
SIO_000300: 9.720000000000001e0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 613
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variant carriers: 0

GenotypeQuality
all individuals: 60
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variant carriers: 0

GenotypeQuality
all individuals: 495
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 500
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1997
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 15
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 78
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 5.081300813008131e-4
allele num: 1968
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.26e-2

QD
type: SiteQuality
SIO_000300: 6.98e0

VQSLOD
type: SiteQuality
SIO_000300: -1.755e0

DP
type: SiteQuality
SIO_000300: 4.9261e4

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.805e1

GenotypeQuality
all individuals: 2172
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1524
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variant carriers: 1

GenotypeQuality
all individuals: 198
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variant carriers: 0

GenotypeQuality
all individuals: 212
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variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 151
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 34
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variant carriers: 0

GenotypeQuality
all individuals: 35
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variant carriers: 0

GenotypeQuality
all individuals: 67
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variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 2.11864406779661e-3
allele num: 1888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 86
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.748e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.79e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 7.81e0

VQSLOD
type: SiteQuality
SIO_000300: -1.16e0

DP
type: SiteQuality
SIO_000300: 8.9683e4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.007e0

GenotypeQuality
all individuals: 1494
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2437
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 39
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GenotypeQuality
all individuals: 1857
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 93
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 43
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GenotypeQuality
all individuals: 249
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variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1838
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.002402883460152e-4
allele num: 4994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.744e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.388e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.13e-1

DP
type: SiteQuality
SIO_000300: 8.5992e4

QD
type: SiteQuality
SIO_000300: 8.720000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 6.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.073e0

GenotypeQuality
all individuals: 524
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variant carriers: 0

GenotypeQuality
all individuals: 116
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.581311306143521e-4
allele num: 3874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1396
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.9717e4

FS
type: SiteQuality
SIO_000300: 6.51e0

MQRankSum
type: SiteQuality
SIO_000300: 4.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.63e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.065e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

QD
type: SiteQuality
SIO_000300: 6.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.042e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 117
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 45
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GenotypeQuality
all individuals: 18
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1526
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.56e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

FS
type: SiteQuality
SIO_000300: 3.424e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 5.775e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.12e-1

QD
type: SiteQuality
SIO_000300: 7.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

DP
type: SiteQuality
SIO_000300: 6.4195e4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 8.928571428571428e-3
allele num: 112
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.599e0

VQSLOD
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DP
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SIO_000300: 4.2631e4

InbreedingCoeff
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SIO_000300: -7.539999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.89e-1

FS
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SIO_000300: 2.881e0

QD
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SIO_000300: 1.297e1

MQ
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SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.89e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64314
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9898
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
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allele frequency: 8.712319219376198e-5
allele num: 11478
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.511e0

MQRankSum
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SIO_000300: 1.9e-2

ClippingRankSum
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FS
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ReadPosRankSum
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VQSLOD
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SIO_000300: 3.22e-1

InbreedingCoeff
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SIO_000300: 2.9e-3

MQ
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SIO_000300: 5.916e1

QD
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DP
type: SiteQuality
SIO_000300: 1.51665e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
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allele frequency: 1.740947075208914e-4
allele num: 11488
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64420
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9922
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East Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 844
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South Asian
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allele frequency: 0.0e0
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QD
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 2.8e-3

MQ
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SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.04e-1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.77e-1

DP
type: SiteQuality
SIO_000300: 1.524011e6

VQSLOD
type: SiteQuality
SIO_000300: 4.31e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9922
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64420
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
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allele count: 9
allele frequency: 1.056834194457492e-3
allele num: 8516
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.78e-1

FS
type: SiteQuality
SIO_000300: 6.04e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.77e-1

QD
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SIO_000300: 9.619999999999999e0

DP
type: SiteQuality
SIO_000300: 1.524011e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.46e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552457540286273e-5
allele num: 64414
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9922
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South Asian
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8516
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Other
type: Population
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.65e-1

QD
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.618e0

InbreedingCoeff
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SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 8.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e-1

DP
type: SiteQuality
SIO_000300: 1.526911e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 64572
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African
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East Asian
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South Asian
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Other
type: Population
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Latino
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MQ
type: SiteQuality
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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FS
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DP
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Non-Finnish)
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Latino
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East Asian
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European (Finnish)
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African
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MQRankSum
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MQ
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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DP
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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African
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East Asian
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Other
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ReadPosRankSum
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQRankSum
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DP
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ClippingRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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African
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European (Finnish)
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East Asian
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Latino
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South Asian
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FS
type: SiteQuality
SIO_000300: 2.931e0

DP
type: SiteQuality
SIO_000300: 1.542308e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.561e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

QD
type: SiteQuality
SIO_000300: 1.167e1

VQSLOD
type: SiteQuality
SIO_000300: -1.856e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.175e0

MQ
type: SiteQuality
SIO_000300: 5.889e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.419999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

GenotypeQuality
all individuals: 2291
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2137
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

QD
type: SiteQuality
SIO_000300: 1.117e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 2.482e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.34e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

DP
type: SiteQuality
SIO_000300: 1.542656e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.56e-1

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 699
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2452
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.162568558575214e-5
allele num: 64908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15520
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.333722287047841e-4
allele num: 8570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.56e-1

DP
type: SiteQuality
SIO_000300: 1.542656e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.34e-1

FS
type: SiteQuality
SIO_000300: 2.482e0

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

QD
type: SiteQuality
SIO_000300: 1.117e1

GenotypeQuality
all individuals: 8049
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 792
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 350
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variant carriers: 0

GenotypeQuality
all individuals: 2041
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.146788990825688e-3
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.156964263164541e-4
allele num: 15838
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536806516059628e-5
allele num: 65070
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.231e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.53987e6

VQSLOD
type: SiteQuality
SIO_000300: 8.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e0

GenotypeQuality
all individuals: 829
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 215
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GenotypeQuality
all individuals: 1913
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GenotypeQuality
all individuals: 7881
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variant carriers: 0

GenotypeQuality
all individuals: 478
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 59
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 337
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 536
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variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65086
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16070
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.540832049306626e-4
allele num: 6490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -8.63e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.314e0

MQRankSum
type: SiteQuality
SIO_000300: 1.76e0

QD
type: SiteQuality
SIO_000300: 1.165e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e-1

FS
type: SiteQuality
SIO_000300: 1.489e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 1.532563e6

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 892
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9962
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16078
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540784567501772e-5
allele num: 64902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e0

MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

DP
type: SiteQuality
SIO_000300: 1.518626e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.871e0

MQ
type: SiteQuality
SIO_000300: 5.909e1

VQSLOD
type: SiteQuality
SIO_000300: -9.563e-1

FS
type: SiteQuality
SIO_000300: 5.098e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.469e0

QD
type: SiteQuality
SIO_000300: 1.008e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
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variant carriers: 2

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 809
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.003205128205128e-4
allele num: 9984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64986
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.518186e6

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

FS
type: SiteQuality
SIO_000300: 1.185e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.09e-1

QD
type: SiteQuality
SIO_000300: 1.023e1

VQSLOD
type: SiteQuality
SIO_000300: 3.69e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
all individuals: 431
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.077964849641417e-5
allele num: 64978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167406023815083e-4
allele num: 8566
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 1.515176e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.078e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 32
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GenotypeQuality
all individuals: 477
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GenotypeQuality
all individuals: 958
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GenotypeQuality
all individuals: 1910
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GenotypeQuality
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GenotypeQuality
all individuals: 832
bin: 2.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 194
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GenotypeQuality
all individuals: 42
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GenotypeQuality
all individuals: 188
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GenotypeQuality
all individuals: 433
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variant carriers: 3

GenotypeQuality
all individuals: 700
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.33590282644242e-4
allele num: 8562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.195786864931847e-5
allele num: 16140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64982
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.508222e6

QD
type: SiteQuality
SIO_000300: 9.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.658e0

VQSLOD
type: SiteQuality
SIO_000300: -6.578000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e0

FS
type: SiteQuality
SIO_000300: 7.32e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.645e0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6320
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 155
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.554774713144065e-5
allele num: 64318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15916
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.76e-1

DP
type: SiteQuality
SIO_000300: 1.447337e6

QD
type: SiteQuality
SIO_000300: 1.124e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.67e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.472e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.16e0

MQ
type: SiteQuality
SIO_000300: 5.878e1

GenotypeQuality
all individuals: 80
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.560305819940709e-5
allele num: 64090
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
SIO_000300: -1.14e0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.436273e6

QD
type: SiteQuality
SIO_000300: 1.374e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.776e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.217e0

GenotypeQuality
all individuals: 380
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 453
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variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11022
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8420
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.341154090044388e-5
allele num: 15770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.572277601333291e-5
allele num: 63602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6102
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.086e0

FS
type: SiteQuality
SIO_000300: 6.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.6e-2

DP
type: SiteQuality
SIO_000300: 1.410466e6

QD
type: SiteQuality
SIO_000300: 3.75e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.178e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 449
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1401
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 16

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1420
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variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11020
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.204819277108434e-3
allele num: 830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.916420845624386e-4
allele num: 6102
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.744958481613286e-4
allele num: 8430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.099418878592744e-4
allele num: 63670
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.341958396752917e-5
allele num: 15768
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.95e-1

QD
type: SiteQuality
SIO_000300: 1.157e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.601e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.595e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.409187e6

GenotypeQuality
all individuals: 5171
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1956
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variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10954
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.149330587023687e-4
allele num: 9710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6076
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.23e-1

DP
type: SiteQuality
SIO_000300: 1.390482e6

QD
type: SiteQuality
SIO_000300: 1.511e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.69e-1

FS
type: SiteQuality
SIO_000300: 1.691e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.09e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10880
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.387327542156362e-5
allele num: 15656
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.04e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.25e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.35e-1

DP
type: SiteQuality
SIO_000300: 1.370744e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 1.177e0

QD
type: SiteQuality
SIO_000300: 9.289999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.587654399390341e-5
allele num: 62986
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.61e0

DP
type: SiteQuality
SIO_000300: 1.360578e6

FS
type: SiteQuality
SIO_000300: 2.199e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.37e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.534e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.27e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1914
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9584
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.449948400412796e-5
allele num: 15504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62662
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.329999999999999e-2

FS
type: SiteQuality
SIO_000300: 6.744e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.097e0

QD
type: SiteQuality
SIO_000300: 1.018e1

DP
type: SiteQuality
SIO_000300: 1.341546e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.431e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5856
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10682
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.203948952564411e-4
allele num: 8306
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.285e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.298e0

FS
type: SiteQuality
SIO_000300: 1.922e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.3313e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.51e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.72e-1

QD
type: SiteQuality
SIO_000300: 1.507e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15442
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.372071227741331e-5
allele num: 10670
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

VQSLOD
type: SiteQuality
SIO_000300: -2.715e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.327926e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.06e-1

QD
type: SiteQuality
SIO_000300: 2.278e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4060
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5714
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.06224771616741e-4
allele num: 9414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15212
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8234
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.852e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.8e-1

DP
type: SiteQuality
SIO_000300: 1.296339e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.232e0

FS
type: SiteQuality
SIO_000300: 1.1974e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.12e0

QD
type: SiteQuality
SIO_000300: 1.288e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61268
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.21654501216545e-4
allele num: 8220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5686
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0499e1

VQSLOD
type: SiteQuality
SIO_000300: -1.407e0

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.5e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

QD
type: SiteQuality
SIO_000300: 9.44e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.45e0

DP
type: SiteQuality
SIO_000300: 1.293458e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 9
allele frequency: 6.081081081081081e-4
allele num: 14800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8138
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60250
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5522
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.086e1

DP
type: SiteQuality
SIO_000300: 1.251548e6

FS
type: SiteQuality
SIO_000300: 1.94e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e-1

BaseQRankSum
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SIO_000300: 2.29e0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.12e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14670
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8106
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.668168017882761e-5
allele num: 59946
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.361e0

FS
type: SiteQuality
SIO_000300: 1.013e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.524e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

DP
type: SiteQuality
SIO_000300: 1.243892e6

MQRankSum
type: SiteQuality
SIO_000300: -6.23e-1

MQ
type: SiteQuality
SIO_000300: 5.863e1

QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7936
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8944
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 3
allele frequency: 3.021148036253776e-4
allele num: 9930
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.878e0

DP
type: SiteQuality
SIO_000300: 1.1678e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
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BaseQRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

VQSLOD
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SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56004
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13028
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5092
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7804
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MQRankSum
type: SiteQuality
SIO_000300: -5.620000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.732e0

DP
type: SiteQuality
SIO_000300: 1.102792e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.694e0

QD
type: SiteQuality
SIO_000300: 3.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 450
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.634777551613841e-5
allele num: 55024
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.2181e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.902e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.78e-1

DP
type: SiteQuality
SIO_000300: 1.045298e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.62e-1

QD
type: SiteQuality
SIO_000300: 1.341e1

VQSLOD
type: SiteQuality
SIO_000300: 2.34e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4912
num of homozygotes: 0

South Asian
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allele count: 9
allele frequency: 7.293354943273906e-4
allele num: 12340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54346
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.495e0

VQSLOD
type: SiteQuality
SIO_000300: 9.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.61e-1

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

DP
type: SiteQuality
SIO_000300: 1.005842e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4896
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.844065796267611e-5
allele num: 54228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.547e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.715e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.82e-1

DP
type: SiteQuality
SIO_000300: 9.97746e5

BaseQRankSum
type: SiteQuality
SIO_000300: 6.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 4.38e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4772
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11924
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9172
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.202212070209185e-4
allele num: 8318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7598
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.38e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

QD
type: SiteQuality
SIO_000300: 1.471e1

DP
type: SiteQuality
SIO_000300: 9.33389e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 195
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4744
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.207437816952427e-4
allele num: 8282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.25331e5

QD
type: SiteQuality
SIO_000300: 6.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.973e-1

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.637e0

MQRankSum
type: SiteQuality
SIO_000300: 8.53e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.587727708533077e-5
allele num: 10430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49128
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7126
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7766
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4294
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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MQRankSum
type: SiteQuality
SIO_000300: -3.55e-1

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.4e-3

DP
type: SiteQuality
SIO_000300: 8.2301e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.896e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.063983488132095e-5
allele num: 48450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7008
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.511e0

VQSLOD
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.9e-3

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.2024e5

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.5033e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.591400461557148e-5
allele num: 65864
num of homozygotes: 0

African
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15786
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.164e1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.525564e6

VQSLOD
type: SiteQuality
SIO_000300: -1.261e0

FS
type: SiteQuality
SIO_000300: 2.8509e1

QD
type: SiteQuality
SIO_000300: 8.130000000000001e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 4
allele frequency: 4.484304932735426e-3
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 47
allele frequency: 4.079152924839438e-3
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.074227054607301e-5
allele num: 65852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15810
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.899999999999999e-1

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

QD
type: SiteQuality
SIO_000300: 1.27e1

DP
type: SiteQuality
SIO_000300: 1.529122e6

GenotypeQuality
all individuals: 82
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2140
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8380
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2022
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38363
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.037113527303651e-5
allele num: 65852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15810
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.536212e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.246e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.65e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-2

GenotypeQuality
all individuals: 1022
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 228
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1862
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 690
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 9

GenotypeQuality
all individuals: 668
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2511
bin: 9.75e1
variant carriers: 1972

GenotypeQuality
all individuals: 758
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 38873
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 8238
bin: 6.75e1
variant carriers: 3

African
type: Population
allele count: 42
allele frequency: 4.084808403034429e-3
allele num: 10282
num of homozygotes: 0

East Asian
type: Population
allele count: 52
allele frequency: 6.038086391082211e-3
allele num: 8612
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 1283
allele frequency: 1.946889226100152e-2
allele num: 65900
num of homozygotes: 11

Latino
type: Population
allele count: 291
allele frequency: 2.524726704841228e-2
allele num: 11526
num of homozygotes: 6

European (Finnish)
type: Population
allele count: 303
allele frequency: 4.716687422166874e-2
allele num: 6424
num of homozygotes: 8

South Asian
type: Population
allele count: 38
allele frequency: 2.389035584056331e-3
allele num: 15906
num of homozygotes: 0

Other
type: Population
allele count: 23
allele frequency: 2.572706935123042e-2
allele num: 894
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

DP
type: SiteQuality
SIO_000300: 1.555297e6

VQSLOD
type: SiteQuality
SIO_000300: 4.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.37e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 7.42e-1

QD
type: SiteQuality
SIO_000300: 1.279e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

GenotypeQuality
all individuals: 758
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8238
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 228
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 38873
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1862
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.972685887708649e-4
allele num: 65900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.676036786395974e-5
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.556662515566625e-4
allele num: 6424
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.725734292939116e-5
allele num: 10282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 1.555297e6

VQSLOD
type: SiteQuality
SIO_000300: 4.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

FS
type: SiteQuality
SIO_000300: 7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

QD
type: SiteQuality
SIO_000300: 1.279e1

GenotypeQuality
all individuals: 1160
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 49
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8609
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.282985674792661e-5
allele num: 15916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65928
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.938e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 1.533752e6

QD
type: SiteQuality
SIO_000300: 1.018e1

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

MQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

FS
type: SiteQuality
SIO_000300: 1.325e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 986
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 221
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65994
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.34e0

VQSLOD
type: SiteQuality
SIO_000300: 2.14e0

MQ
type: SiteQuality
SIO_000300: 5.29e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.95e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.127e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.6e-1

DP
type: SiteQuality
SIO_000300: 1.553441e6

GenotypeQuality
all individuals: 8680
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 309
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514233797698365e-5
allele num: 66040
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e-1

QD
type: SiteQuality
SIO_000300: 8.390000000000001e0

FS
type: SiteQuality
SIO_000300: 8.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.833e0

VQSLOD
type: SiteQuality
SIO_000300: -7.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

DP
type: SiteQuality
SIO_000300: 1.56316e6

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1114
bin: 9.75e1
variant carriers: 689

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 279
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2149
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 42466
bin: 6.25e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 9.701202949165696e-5
allele num: 10308
num of homozygotes: 0

East Asian
type: Population
allele count: 238
allele frequency: 2.761020881670534e-2
allele num: 8620
num of homozygotes: 4

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.5668149762402e-5
allele num: 66078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.553277415346381e-4
allele num: 6438
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.734304543877905e-4
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 460
allele frequency: 2.844070730802523e-2
allele num: 16174
num of homozygotes: 14

Other
type: Population
allele count: 9
allele frequency: 1.004464285714286e-2
allele num: 896
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.249e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.572766e6

FS
type: SiteQuality
SIO_000300: 1.408e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.64e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.39e0

VQSLOD
type: SiteQuality
SIO_000300: 4.07e0

GenotypeQuality
all individuals: 440
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 227
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2176
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8844
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.290793183768542e-4
allele num: 16314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66186
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.846e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 6.672e0

MQRankSum
type: SiteQuality
SIO_000300: -5.12e-1

QD
type: SiteQuality
SIO_000300: 1.066e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.575147e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.96e-1

GenotypeQuality
all individuals: 736
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2176
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.935359009096187e-4
allele num: 10334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510893542441e-5
allele num: 66186
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 6.672e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: -5.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.846e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.32e-1

QD
type: SiteQuality
SIO_000300: 1.066e1

DP
type: SiteQuality
SIO_000300: 1.575147e6

GenotypeQuality
all individuals: 276
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44054
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1880
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8883
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.67305088024763e-5
allele num: 10338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16346
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 1.576257e6

FS
type: SiteQuality
SIO_000300: 3.738e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.51e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.422e1

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

GenotypeQuality
all individuals: 189
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 118
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8932
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509069507741527e-5
allele num: 66266
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.114e0

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

MQ
type: SiteQuality
SIO_000300: 5.909e1

DP
type: SiteQuality
SIO_000300: 1.580955e6

QD
type: SiteQuality
SIO_000300: 1.054e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8932
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.018139015483053e-5
allele num: 66266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.114e0

VQSLOD
type: SiteQuality
SIO_000300: 2.48e-1

QD
type: SiteQuality
SIO_000300: 1.054e1

MQ
type: SiteQuality
SIO_000300: 5.909e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 1.580955e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

GenotypeQuality
all individuals: 106
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2173
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 743
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1888
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44432
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0