5-55081089-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081089
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081089
    reference: chr 5
allele count: 2
allele frequency: 1.658017342861406e-5
allele num: 120626
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*223-36T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.524-36T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.566-36T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.524-36T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.566-36T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.343-36T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.626-36T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-186T>G
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4926
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2928
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7898
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1704
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1252
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-55081091-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081091
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081091
    reference: chr 5
allele count: 9
allele frequency: 7.460830639144492e-5
allele num: 120630
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.524-34T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.626-34T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.343-34T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.566-34T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.524-34T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.566-34T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-184T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*223-34T>C
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7899
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4927
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
reference allele: T
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/5-55081096-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081096
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081096
    reference: chr 5
allele count: 1
allele frequency: 8.288437629506838e-6
allele num: 120650
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.566-29C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.566-29C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.524-29C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*223-29C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.343-29C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-179C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.524-29C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.626-29C>A
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7894
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5954
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

5-55081096-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081096
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081096
    reference: chr 5
allele count: 3
allele frequency: 2.486531288852051e-5
allele num: 120650
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-179C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.566-29C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*223-29C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.343-29C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.626-29C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.524-29C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.566-29C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.524-29C>T
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7894
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4385
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1360
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum

5-55081097-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081097
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081097
    reference: chr 5
allele count: 1212
allele frequency: 1.004575293415556e-2
allele num: 120648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.524-28G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.566-28G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*223-28G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.626-28G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.524-28G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.566-28G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.343-28G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-178G>A
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 8.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 5.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 8217
  bin: 9.75e1
  variant carriers: 768
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 2.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 6.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 6.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 9.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 8.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 7.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 7.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 8
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

5-55081098-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081098
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081098
    reference: chr 5
allele count: 1
allele frequency: 8.286651861182008e-6
allele num: 120676
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.524-27A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.343-27A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.524-27A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.566-27A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.566-27A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*223-27A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.626-27A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-177A>G
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5391
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4957
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7612
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5292
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45766
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

5-55081101-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081101
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081101
    reference: chr 5
allele count: 52
allele frequency: 4.308630518361395e-4
allele num: 120688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*223-24G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.566-24G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-174G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.524-24G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.343-24G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.566-24G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.626-24G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.524-24G>A
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7619
  bin: 9.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5390
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5293
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45782
  bin: 9.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

5-55081106-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081106
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081106
    reference: chr 5
allele count: 3
allele frequency: 2.485254158658626e-5
allele num: 120712
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.524-19T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.566-19T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.343-19T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.566-19T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.524-19T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-169T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.626-19T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*223-19T>G
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7596
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5396
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1712
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6455
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1761
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

5-55081107-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081107
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081108
    reference: chr 5
allele count: 1
allele frequency: 8.283906027370025e-6
allele num: 120716
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-167dupA
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*223-17dupA
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.626-17dupA
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.566-17dupA
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.343-17dupA
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.524-17dupA
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.524-17dupA
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.566-17dupA
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7597
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5396
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

5-55081108-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081108
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081108
    reference: chr 5
allele count: 78
allele frequency: 6.460911485512648e-4
allele num: 120726
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.524-17A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*223-17A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.566-17A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.566-17A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-167A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.343-17A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.524-17A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.626-17A>G
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5294
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5395
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3515
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7615
  bin: 9.75e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1383
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

5-55081109-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081109
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081109
    reference: chr 5
allele count: 2
allele frequency: 1.656643970644269e-5
allele num: 120726
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.626-16T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.343-16T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.566-16T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-166T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.524-16T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*223-16T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.524-16T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.566-16T>C
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6486
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum

5-55081109-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081109
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081109
    reference: chr 5
allele count: 3
allele frequency: 2.484965955966403e-5
allele num: 120726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.524-16T>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.566-16T>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.343-16T>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*223-16T>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.566-16T>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.626-16T>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.524-16T>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-166T>A
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45755
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6486
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1760
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-55081112-ATTTC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081112
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081108
    reference: chr 5
allele count: 1
allele frequency: 8.281847845891375e-6
allele num: 120746
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.566-9_566-6delCTTT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.566-9_566-6delCTTT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.343-9_343-6delCTTT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.524-9_524-6delCTTT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-159_227-156delCTTT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.524-9_524-6delCTTT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.626-9_626-6delCTTT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*223-9_*223-6delCTTT
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3571
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4438
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7567
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4961
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6555
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: ATTTC
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS

5-55081124-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081124
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081124
    reference: chr 5
allele count: 6
allele frequency: 4.966311851275515e-5
allele num: 120814
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.566-1G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.343-1G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.566-1G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-151G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.524-1G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*223-1G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.626-1G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.524-1G>A
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7570
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
hgvs: c.626-1G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

5-55081134-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081134
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081134
    reference: chr 5
allele count: 1
allele frequency: 8.275268532463878e-6
allele num: 120842
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*232A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.575A>G
  hgvsp: ENSP00000427167.1:p.Lys192Arg
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.575A>G
  hgvsp: ENSP00000425359.2:p.Lys192Arg
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.533A>G
  hgvsp: ENSP00000347087.5:p.Lys178Arg
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.635A>G
  hgvsp: ENSP00000424838.1:p.Lys212Arg
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.352A>G
  hgvsp: ENSP00000423102.1:p.Lys118Arg
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.533A>G
  hgvsp: ENSP00000334167.7:p.Lys178Arg
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-141A>G
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7567
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6750
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys212Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

5-55081137-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081137
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081137
    reference: chr 5
allele count: 1
allele frequency: 8.274446853227862e-6
allele num: 120854
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.578G>C
  hgvsp: ENSP00000427167.1:p.Gly193Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.578G>C
  hgvsp: ENSP00000425359.2:p.Gly193Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.536G>C
  hgvsp: ENSP00000347087.5:p.Gly179Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.638G>C
  hgvsp: ENSP00000424838.1:p.Gly213Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.355G>C
  hgvsp: ENSP00000423102.1:p.Gly119Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.536G>C
  hgvsp: ENSP00000334167.7:p.Gly179Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*235G>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-138G>C
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly213Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

5-55081163-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081163
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081163
    reference: chr 5
allele count: 2
allele frequency: 1.654068180690408e-5
allele num: 120914
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.381T>C
  hgvsp: ENSP00000423102.1:p.Ser128Pro
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.664T>C
  hgvsp: ENSP00000424838.1:p.Ser222Pro
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.604T>C
  hgvsp: ENSP00000425359.2:p.Ser202Pro
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.604T>C
  hgvsp: ENSP00000427167.1:p.Ser202Pro
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.562T>C
  hgvsp: ENSP00000347087.5:p.Ser188Pro
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.562T>C
  hgvsp: ENSP00000334167.7:p.Ser188Pro
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-112T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*261T>C
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5396
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7567
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser222Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

5-55081164-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081164
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081164
    reference: chr 5
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.563C>G
  hgvsp: ENSP00000347087.5:p.Ser188Cys
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.605C>G
  hgvsp: ENSP00000425359.2:p.Ser202Cys
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.665C>G
  hgvsp: ENSP00000424838.1:p.Ser222Cys
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.605C>G
  hgvsp: ENSP00000427167.1:p.Ser202Cys
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*262C>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-111C>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.382C>G
  hgvsp: ENSP00000423102.1:p.Ser128Cys
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.563C>G
  hgvsp: ENSP00000334167.7:p.Ser188Cys
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7567
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser222Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

5-55081167-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081167
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081167
    reference: chr 5
allele count: 1
allele frequency: 8.271024945411235e-6
allele num: 120904
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.385G>A
  hgvsp: ENSP00000423102.1:p.Gly129Glu
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*265G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.668G>A
  hgvsp: ENSP00000424838.1:p.Gly223Glu
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.566G>A
  hgvsp: ENSP00000334167.7:p.Gly189Glu
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.608G>A
  hgvsp: ENSP00000427167.1:p.Gly203Glu
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.566G>A
  hgvsp: ENSP00000347087.5:p.Gly189Glu
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.608G>A
  hgvsp: ENSP00000425359.2:p.Gly203Glu
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-108G>A
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6728
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly223Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

5-55081167-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081167
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081167
    reference: chr 5
allele count: 1
allele frequency: 8.271024945411235e-6
allele num: 120904
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.608G>T
  hgvsp: ENSP00000425359.2:p.Gly203Val
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.566G>T
  hgvsp: ENSP00000347087.5:p.Gly189Val
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.566G>T
  hgvsp: ENSP00000334167.7:p.Gly189Val
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.668G>T
  hgvsp: ENSP00000424838.1:p.Gly223Val
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.385G>T
  hgvsp: ENSP00000423102.1:p.Gly129Val
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.608G>T
  hgvsp: ENSP00000427167.1:p.Gly203Val
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*265G>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-108G>T
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45750
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gly223Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

5-55081168-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081168
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081168
    reference: chr 5
allele count: 6
allele frequency: 4.962286621675268e-5
allele num: 120912
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.609A>G
  hgvsp: ENST00000506511.1:c.609A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.567A>G
  hgvsp: ENST00000354991.5:c.567A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.669A>G
  hgvsp: ENST00000505374.1:c.669A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*266A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.567A>G
  hgvsp: ENST00000353507.5:c.567A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.609A>G
  hgvsp: ENST00000514278.2:c.609A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-107A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.386A>G
  hgvsp: ENST00000503129.1:c.386A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1803
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45751
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly223Gly
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

5-55081174-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081174
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081174
    reference: chr 5
allele count: 4
allele frequency: 3.308409978164494e-5
allele num: 120904
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.613+2T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*270+2T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.571+2T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.390+2T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.571+2T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-101T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.613+2T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.673+2T>C
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7563
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1389
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45748
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6690
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
hgvs: c.673+2T>C
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-55081176-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081176
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081176
    reference: chr 5
allele count: 1
allele frequency: 8.271298593879239e-6
allele num: 120900
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.673+4A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.613+4A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*270+4A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.571+4A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.571+4A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-99A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.613+4A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.390+4A>C
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7562
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1797
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 8.75e1
  variant carriers: 0
hgvs: c.673+4A>C
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

5-55081181-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081181
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081180
    reference: chr 5
allele count: 5
allele frequency: 4.136059823969294e-5
allele num: 120888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-92delC
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.390+11delC
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.673+11delC
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*270+11delC
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.571+11delC
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.571+11delC
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.613+11delC
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.613+11delC
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7564
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: TC
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD

5-55081183-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081183
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081183
    reference: chr 5
allele count: 1
allele frequency: 8.273214640280627e-6
allele num: 120872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.571+11C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*270+11C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.613+11C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-92C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.390+11C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.613+11C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.571+11C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.673+11C>T
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5398
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7563
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45745
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

5-55081209-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081209
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081209
    reference: chr 5
allele count: 1
allele frequency: 8.283906027370025e-6
allele num: 120716
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.571+37G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-66G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.613+37G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.673+37G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.571+37G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.390+37G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*270+37G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.613+37G>A
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5398
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7560
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/5-55081214-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081214
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081214
    reference: chr 5
allele count: 1
allele frequency: 8.283219853221344e-6
allele num: 120726
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-61A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.613+42A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*270+42A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.571+42A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.673+42A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.613+42A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.390+42A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.571+42A>C
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4438
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6029
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1728
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

5-55081221-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081221
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081221
    reference: chr 5
allele count: 1
allele frequency: 8.284866862189524e-6
allele num: 120702
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-54T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.613+49T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.571+49T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.571+49T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.613+49T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.390+49T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*270+49T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.673+49T>C
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4434
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45743
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

5-55081225-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081225
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081224
    reference: chr 5
allele count: 1
allele frequency: 8.291461452995706e-6
allele num: 120606
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-47delT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.572-47delT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.391-47delT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.674-47delT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.614-47delT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.572-47delT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*271-47delT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.614-47delT
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: CT
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum

5-55081231-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081231
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081231
    reference: chr 5
allele count: 11
allele frequency: 9.117885976691368e-5
allele num: 120642
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.572-44A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.614-44A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.572-44A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*271-44A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.391-44A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.614-44A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-44A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.674-44A>G
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7560
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45748
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

5-55081235-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081235
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081236
    reference: chr 5
allele count: 1
allele frequency: 8.288300235387727e-6
allele num: 120652
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*271-34dupA
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.614-34dupA
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.391-34dupA
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.572-34dupA
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-34dupA
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.614-34dupA
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.572-34dupA
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.674-34dupA
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7560
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4434
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5398
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

5-55081247-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081247
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081247
    reference: chr 5
allele count: 8
allele frequency: 6.628442647399993e-5
allele num: 120692
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.572-28A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.391-28A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.614-28A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-28A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.674-28A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*271-28A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.614-28A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.572-28A>G
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7561
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4964
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5398
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6273
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-55081249-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081249
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081249
    reference: chr 5
allele count: 3
allele frequency: 2.485913158766987e-5
allele num: 120680
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.572-26C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.572-26C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.614-26C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*271-26C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.614-26C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.674-26C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.391-26C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-26C>A
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7558
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6302
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

5-55081251-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081251
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081251
    reference: chr 5
allele count: 1
allele frequency: 8.285965232089886e-6
allele num: 120686
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-24C>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.674-24C>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.572-24C>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.391-24C>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.614-24C>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.614-24C>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.572-24C>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*271-24C>G
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4434
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1691
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45745
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

5-55081251-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081251
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081251
    reference: chr 5
allele count: 6
allele frequency: 4.971579139253932e-5
allele num: 120686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.572-24C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.614-24C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.391-24C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.674-24C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-24C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.572-24C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.614-24C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*271-24C>T
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4434
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6320
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

5-55081254-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081254
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081254
    reference: chr 5
allele count: 1
allele frequency: 8.285827919925758e-6
allele num: 120688
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.391-21T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.614-21T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-21T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.572-21T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*271-21T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.572-21T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.614-21T>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.674-21T>C
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4434
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7555
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

5-55081258-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081258
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081258
    reference: chr 5
allele count: 1
allele frequency: 8.283906027370025e-6
allele num: 120716
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-17A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.572-17A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.614-17A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*271-17A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.614-17A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.674-17A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.391-17A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.572-17A>G
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7555
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6434
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

5-55081272-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081272
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081272
    reference: chr 5
allele count: 1
allele frequency: 8.274583788435442e-6
allele num: 120852
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.614-3A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.572-3A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.674-3A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.227-3A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.572-3A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.391-3A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.614-3A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*271-3A>G
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7554
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45746
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
hgvs: c.674-3A>G
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

5-55081287-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081287
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081287
    reference: chr 5
allele count: 2
allele frequency: 1.653739932858159e-5
allele num: 120938
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.626C>T
  hgvsp: ENSP00000427167.1:p.Ser209Leu
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.403C>T
  hgvsp: ENSP00000423102.1:p.Ser135Leu
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.686C>T
  hgvsp: ENSP00000424838.1:p.Ser229Leu
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.584C>T
  hgvsp: ENSP00000334167.7:p.Ser195Leu
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*283C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.584C>T
  hgvsp: ENSP00000347087.5:p.Ser195Leu
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.239C>T
  hgvsp: ENSP00000423123.1:p.Ser80Leu
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.626C>T
  hgvsp: ENSP00000425359.2:p.Ser209Leu
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7554
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5401
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser229Leu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

5-55081288-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081288
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081288
    reference: chr 5
allele count: 1
allele frequency: 8.267879288962381e-6
allele num: 120950
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.627A>G
  hgvsp: ENST00000514278.2:c.627A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.404A>G
  hgvsp: ENST00000503129.1:c.404A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.585A>G
  hgvsp: ENST00000353507.5:c.585A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.585A>G
  hgvsp: ENST00000354991.5:c.585A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.240A>G
  hgvsp: ENST00000511853.1:c.240A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.627A>G
  hgvsp: ENST00000506511.1:c.627A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*284A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.687A>G
  hgvsp: ENST00000505374.1:c.687A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7553
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser229Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

5-55081293-CAGA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081293
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081290
    reference: chr 5
allele count: 1
allele frequency: 8.266922390132602e-6
allele num: 120964
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.248_250delAAG
  hgvsp: ENSP00000423123.1:p.Glu83del
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.635_637delAAG
  hgvsp: ENSP00000425359.2:p.Glu212del
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.593_595delAAG
  hgvsp: ENSP00000347087.5:p.Glu198del
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.593_595delAAG
  hgvsp: ENSP00000334167.7:p.Glu198del
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.412_414delAAG
  hgvsp: ENSP00000423102.1:p.Glu138del
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.695_697delAAG
  hgvsp: ENSP00000424838.1:p.Glu232del
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.635_637delAAG
  hgvsp: ENSP00000427167.1:p.Glu212del
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*292_*294delAAG
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7554
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6854
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu232del
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: CAGA
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

5-55081296-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081296
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081296
    reference: chr 5
allele count: 1
allele frequency: 8.267879288962381e-6
allele num: 120950
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.412A>G
  hgvsp: ENSP00000423102.1:p.Glu138Gly
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.695A>G
  hgvsp: ENSP00000424838.1:p.Glu232Gly
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.593A>G
  hgvsp: ENSP00000334167.7:p.Glu198Gly
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.635A>G
  hgvsp: ENSP00000425359.2:p.Glu212Gly
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.635A>G
  hgvsp: ENSP00000427167.1:p.Glu212Gly
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.248A>G
  hgvsp: ENSP00000423123.1:p.Glu83Gly
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.593A>G
  hgvsp: ENSP00000347087.5:p.Glu198Gly
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*292A>G
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7553
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu232Gly
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/5-55081307-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081307
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081307
    reference: chr 5
allele count: 1
allele frequency: 8.268973158913126e-6
allele num: 120934
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.604A>C
  hgvsp: ENSP00000347087.5:p.Ser202Arg
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.706A>C
  hgvsp: ENSP00000424838.1:p.Ser236Arg
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*303A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.423A>C
  hgvsp: ENSP00000423102.1:p.Ser142Arg
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.646A>C
  hgvsp: ENSP00000425359.2:p.Ser216Arg
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.259A>C
  hgvsp: ENSP00000423123.1:p.Ser87Arg
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.646A>C
  hgvsp: ENSP00000427167.1:p.Ser216Arg
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.604A>C
  hgvsp: ENSP00000334167.7:p.Ser202Arg
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7552
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5401
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6802
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser236Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

5-55081317-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081317
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081317
    reference: chr 5
allele count: 1
allele frequency: 8.276090374906894e-6
allele num: 120830
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.269C>T
  hgvsp: ENSP00000423123.1:p.Thr90Ile
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*313C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.656C>T
  hgvsp: ENSP00000427167.1:p.Thr219Ile
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.433C>T
  hgvsp: ENSP00000423102.1:p.Thr145Ile
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.716C>T
  hgvsp: ENSP00000424838.1:p.Thr239Ile
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.614C>T
  hgvsp: ENSP00000334167.7:p.Thr205Ile
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.614C>T
  hgvsp: ENSP00000347087.5:p.Thr205Ile
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.656C>T
  hgvsp: ENSP00000425359.2:p.Thr219Ile
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5401
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3502
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7553
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr239Ile
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

5-55081337-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081337
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081337
    reference: chr 5
allele count: 1
allele frequency: 8.295863682367972e-6
allele num: 120542
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.721+15G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.619+15G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.274+15G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*318+15G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.438+15G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.661+15G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.619+15G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.661+15G>A
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7552
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS

5-55081340-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081340
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081340
    reference: chr 5
allele count: 1
allele frequency: 8.302475798283047e-6
allele num: 120446
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.438+18T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.619+18T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.721+18T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.274+18T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.661+18T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*318+18T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.619+18T>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.661+18T>G
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7552
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2727
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45743
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

5-55081343-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081343
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081343
    reference: chr 5
allele count: 1
allele frequency: 8.307717869901138e-6
allele num: 120370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.619+21C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.661+21C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.274+21C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.721+21C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.661+21C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.438+21C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*318+21C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.619+21C>T
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5402
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7553
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum

5-55081361-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081361
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081361
    reference: chr 5
allele count: 86
allele frequency: 7.159268755619194e-4
allele num: 120124
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.274+39G>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.438+39G>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*318+39G>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.661+39G>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.721+39G>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.619+39G>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.661+39G>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.619+39G>C
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5402
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 9.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4426
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 9.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4426
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3715
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45748
  bin: 9.75e1
  variant carriers: 86
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

5-55081372-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081372
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081372
    reference: chr 5
allele count: 7
allele frequency: 5.855388630508248e-5
allele num: 119548
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.661+50A>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.619+50A>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*318+50A>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.619+50A>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.438+50A>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.721+50A>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.661+50A>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.274+50A>T
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7541
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4423
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4969
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5403
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

5-55081512-TGTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081512
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081509
    reference: chr 5
allele count: 1
allele frequency: 8.480037990570198e-6
allele num: 117924
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.722-42_722-40delAGT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.275-42_275-40delAGT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.662-42_662-40delAGT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.620-42_620-40delAGT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.662-42_662-40delAGT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*319-42_*319-40delAGT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.439-42_439-40delAGT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.620-42_620-40delAGT
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2366
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1653
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: TGTA
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

5-55081516-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081516
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081516
    reference: chr 5
allele count: 1
allele frequency: 8.472996559963397e-6
allele num: 118022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*319-41G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.662-41G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.275-41G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.722-41G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.662-41G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.620-41G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.620-41G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.439-41G>A
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3127
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1739
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1430
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2211
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

5-55081520-CTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081520
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081518
    reference: chr 5
allele count: 24
allele frequency: 2.031488065007618e-4
allele num: 118140
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.620-35_620-34delGT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.662-35_662-34delGT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.439-35_439-34delGT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.275-35_275-34delGT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*319-35_*319-34delGT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.620-35_620-34delGT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.662-35_662-34delGT
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.722-35_722-34delGT
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17693
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17653
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8107
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6717
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1792
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1628
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 966
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: CTG
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum

5-55081526-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081526
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081526
    reference: chr 5
allele count: 1
allele frequency: 8.441098018030185e-6
allele num: 118468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.662-31C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.662-31C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.722-31C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.439-31C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.620-31C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.620-31C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*319-31C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.275-31C>T
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18242
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3149
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19375
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6877
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2175
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

5-55081527-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081527
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081527
    reference: chr 5
allele count: 4
allele frequency: 3.374046831770025e-5
allele num: 118552
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.662-30G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*319-30G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.662-30G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.439-30G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.620-30G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.620-30G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.722-30G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.275-30G>A
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18334
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1450
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2181
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3090
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff

5-55081530-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081530
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081530
    reference: chr 5
allele count: 1
allele frequency: 8.410570404884859e-6
allele num: 118898
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.620-27C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.620-27C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.439-27C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*319-27C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.662-27C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.662-27C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.275-27C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.722-27C>T
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20264
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7026
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

5-55081533-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081533
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081533
    reference: chr 5
allele count: 1
allele frequency: 8.390387971539804e-6
allele num: 119184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.275-24T>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.722-24T>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.620-24T>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.662-24T>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.439-24T>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.662-24T>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.620-24T>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*319-24T>A
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

5-55081536-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081536
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081536
    reference: chr 5
allele count: 1
allele frequency: 8.382651264942076e-6
allele num: 119294
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.722-21G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.439-21G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*319-21G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.275-21G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.662-21G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.662-21G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.620-21G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.620-21G>A
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21052
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7031
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3151
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1462
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

5-55081547-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081547
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081547
    reference: chr 5
allele count: 1
allele frequency: 8.330417687142833e-6
allele num: 120042
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.439-10A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.275-10A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.620-10A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.620-10A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*319-10A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.722-10A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.662-10A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.662-10A>G
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2249
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7039
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/5-55081560-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081560
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081560
    reference: chr 5
allele count: 1
allele frequency: 8.284866862189524e-6
allele num: 120702
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.623C>A
  hgvsp: ENSP00000347087.5:p.Pro208Gln
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.725C>A
  hgvsp: ENSP00000424838.1:p.Pro242Gln
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*322C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.442C>A
  hgvsp: ENSP00000423102.1:p.Pro148Gln
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.623C>A
  hgvsp: ENSP00000334167.7:p.Pro208Gln
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.278C>A
  hgvsp: ENSP00000423123.1:p.Pro93Gln
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.665C>A
  hgvsp: ENSP00000427167.1:p.Pro222Gln
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.665C>A
  hgvsp: ENSP00000425359.2:p.Pro222Gln
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21940
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2520
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7039
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro242Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-55081576-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081576
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081576
    reference: chr 5
allele count: 1
allele frequency: 8.260912665631299e-6
allele num: 121052
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.741A>C
  hgvsp: ENST00000505374.1:c.741A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.458A>C
  hgvsp: ENST00000503129.1:c.458A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.294A>C
  hgvsp: ENST00000511853.1:c.294A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.639A>C
  hgvsp: ENST00000353507.5:c.639A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.681A>C
  hgvsp: ENST00000514278.2:c.681A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*338A>C
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.639A>C
  hgvsp: ENST00000354991.5:c.639A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.681A>C
  hgvsp: ENST00000506511.1:c.681A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20138
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35245
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile247Ile
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-55081580-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081580
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081580
    reference: chr 5
allele count: 1
allele frequency: 8.258593066085262e-6
allele num: 121086
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.685C>T
  hgvsp: ENSP00000427167.1:p.Pro229Ser
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.462C>T
  hgvsp: ENSP00000423102.1:p.Pro155Ser
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.745C>T
  hgvsp: ENSP00000424838.1:p.Pro249Ser
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.643C>T
  hgvsp: ENSP00000347087.5:p.Pro215Ser
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*342C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.298C>T
  hgvsp: ENSP00000423123.1:p.Pro100Ser
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.643C>T
  hgvsp: ENSP00000334167.7:p.Pro215Ser
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.685C>T
  hgvsp: ENSP00000425359.2:p.Pro229Ser
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7044
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2548
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35269
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro249Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/5-55081580-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081580
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081580
    reference: chr 5
allele count: 1
allele frequency: 8.258593066085262e-6
allele num: 121086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.643C>A
  hgvsp: ENSP00000334167.7:p.Pro215Thr
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*342C>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.685C>A
  hgvsp: ENSP00000425359.2:p.Pro229Thr
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.685C>A
  hgvsp: ENSP00000427167.1:p.Pro229Thr
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.298C>A
  hgvsp: ENSP00000423123.1:p.Pro100Thr
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.462C>A
  hgvsp: ENSP00000423102.1:p.Pro155Thr
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.745C>A
  hgvsp: ENSP00000424838.1:p.Pro249Thr
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.643C>A
  hgvsp: ENSP00000347087.5:p.Pro215Thr
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7044
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35269
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro249Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

5-55081580-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081580
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081580
    reference: chr 5
allele count: 1
allele frequency: 8.258593066085262e-6
allele num: 121086
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.643C>G
  hgvsp: ENSP00000334167.7:p.Pro215Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.685C>G
  hgvsp: ENSP00000427167.1:p.Pro229Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.298C>G
  hgvsp: ENSP00000423123.1:p.Pro100Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.643C>G
  hgvsp: ENSP00000347087.5:p.Pro215Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.462C>G
  hgvsp: ENSP00000423102.1:p.Pro155Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.685C>G
  hgvsp: ENSP00000425359.2:p.Pro229Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*342C>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.745C>G
  hgvsp: ENSP00000424838.1:p.Pro249Ala
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7407
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35269
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro249Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

5-55081597-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081597
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081597
    reference: chr 5
allele count: 1
allele frequency: 8.253821519363466e-6
allele num: 121156
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.315T>C
  hgvsp: ENST00000511853.1:c.315T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.762T>C
  hgvsp: ENST00000505374.1:c.762T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.479T>C
  hgvsp: ENST00000503129.1:c.479T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.660T>C
  hgvsp: ENST00000354991.5:c.660T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.702T>C
  hgvsp: ENST00000514278.2:c.702T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.702T>C
  hgvsp: ENST00000506511.1:c.702T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.660T>C
  hgvsp: ENST00000353507.5:c.660T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*359T>C
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7426
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35352
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp254Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

5-55081605-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081605
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081605
    reference: chr 5
allele count: 1
allele frequency: 8.253957772752034e-6
allele num: 121154
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.710C>T
  hgvsp: ENSP00000427167.1:p.Ser237Phe
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.770C>T
  hgvsp: ENSP00000424838.1:p.Ser257Phe
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.323C>T
  hgvsp: ENSP00000423123.1:p.Ser108Phe
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.668C>T
  hgvsp: ENSP00000347087.5:p.Ser223Phe
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.487C>T
  hgvsp: ENSP00000423102.1:p.Ser163Phe
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*367C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.710C>T
  hgvsp: ENSP00000425359.2:p.Ser237Phe
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.668C>T
  hgvsp: ENSP00000334167.7:p.Ser223Phe
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35322
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1483
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2542
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser257Phe
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQ

5-55081607-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081607
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081607
    reference: chr 5
allele count: 1
allele frequency: 8.254230293025175e-6
allele num: 121150
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.772A>G
  hgvsp: ENSP00000424838.1:p.Ile258Val
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.712A>G
  hgvsp: ENSP00000425359.2:p.Ile238Val
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.489A>G
  hgvsp: ENSP00000423102.1:p.Ile164Val
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.712A>G
  hgvsp: ENSP00000427167.1:p.Ile238Val
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.670A>G
  hgvsp: ENSP00000334167.7:p.Ile224Val
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*369A>G
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.325A>G
  hgvsp: ENSP00000423123.1:p.Ile109Val
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.670A>G
  hgvsp: ENSP00000347087.5:p.Ile224Val
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21764
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8780
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1483
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile258Val
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

5-55081639-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081639
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081639
    reference: chr 5
allele count: 4
allele frequency: 3.30398295144797e-5
allele num: 121066
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.521C>T
  hgvsp: ENST00000503129.1:c.521C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.744C>T
  hgvsp: ENST00000506511.1:c.744C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.357C>T
  hgvsp: ENST00000511853.1:c.357C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.744C>T
  hgvsp: ENST00000514278.2:c.744C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.702C>T
  hgvsp: ENST00000354991.5:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.702C>T
  hgvsp: ENST00000353507.5:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*401C>T
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.804C>T
  hgvsp: ENST00000505374.1:c.804C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8812
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2260
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe268Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

5-55081640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081640
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081640
    reference: chr 5
allele count: 1
allele frequency: 8.259548037531387e-6
allele num: 121072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.703G>A
  hgvsp: ENSP00000347087.5:p.Asp235Asn
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.745G>A
  hgvsp: ENSP00000425359.2:p.Asp249Asn
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.745G>A
  hgvsp: ENSP00000427167.1:p.Asp249Asn
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.358G>A
  hgvsp: ENSP00000423123.1:p.Asp120Asn
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000430431
  ensembl transcript: ENST00000507645
  gene symbol: DDX4
  hgvsc: ENST00000507645.1:c.*402G>A
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.703G>A
  hgvsp: ENSP00000334167.7:p.Asp235Asn
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.522G>A
  hgvsp: ENSP00000423102.1:p.Asp175Asn
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.805G>A
  hgvsp: ENSP00000424838.1:p.Asp269Asn
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21356
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7046
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp269Asn
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

5-55081648-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081648
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081648
    reference: chr 5
allele count: 6
allele frequency: 4.955728822518832e-5
allele num: 121072
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.530C>T
  hgvsp: ENST00000503129.1:c.530C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.753C>T
  hgvsp: ENST00000514278.2:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.711C>T
  hgvsp: ENST00000354991.5:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.711C>T
  hgvsp: ENST00000353507.5:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.813C>T
  hgvsp: ENST00000505374.1:c.813C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.366C>T
  hgvsp: ENST00000511853.1:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.753C>T
  hgvsp: ENST00000506511.1:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3207
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34996
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr271Tyr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

5-55081649-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081649
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081649
    reference: chr 5
allele count: 5
allele frequency: 4.130046917332981e-5
allele num: 121064
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.367G>A
  hgvsp: ENSP00000423123.1:p.Asp123Asn
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.814G>A
  hgvsp: ENSP00000424838.1:p.Asp272Asn
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.712G>A
  hgvsp: ENSP00000334167.7:p.Asp238Asn
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.754G>A
  hgvsp: ENSP00000427167.1:p.Asp252Asn
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.531G>A
  hgvsp: ENSP00000423102.1:p.Asp178Asn
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.712G>A
  hgvsp: ENSP00000347087.5:p.Asp238Asn
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.754G>A
  hgvsp: ENSP00000425359.2:p.Asp252Asn
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7050
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7317
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp272Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

5-55081662-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 55081662
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 55081662
    reference: chr 5
allele count: 13
allele frequency: 1.074699910717238e-4
allele num: 120964
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423102
  ensembl transcript: ENST00000503129
  gene symbol: DDX4
  hgvsc: ENST00000503129.1:c.544T>C
  hgvsp: ENSP00000423102.1:p.Val182Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000424838
  ensembl transcript: ENST00000505374
  gene symbol: DDX4
  hgvsc: ENST00000505374.1:c.827T>C
  hgvsp: ENSP00000424838.1:p.Val276Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000334167
  ensembl transcript: ENST00000353507
  gene symbol: DDX4
  hgvsc: ENST00000353507.5:c.725T>C
  hgvsp: ENSP00000334167.7:p.Val242Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000425359
  ensembl transcript: ENST00000514278
  gene symbol: DDX4
  hgvsc: ENST00000514278.2:c.767T>C
  hgvsp: ENSP00000425359.2:p.Val256Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000423123
  ensembl transcript: ENST00000511853
  gene symbol: DDX4
  hgvsc: ENST00000511853.1:c.380T>C
  hgvsp: ENSP00000423123.1:p.Val127Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000427167
  ensembl transcript: ENST00000506511
  gene symbol: DDX4
  hgvsc: ENST00000506511.1:c.767T>C
  hgvsp: ENSP00000427167.1:p.Val256Ala
  variant of: http://identifiers.org/hgnc/18700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152670
  ensembl protein: ENSP00000347087
  ensembl transcript: ENST00000354991
  gene symbol: DDX4
  hgvsc: ENST00000354991.5:c.725T>C
  hgvsp: ENSP00000347087.5:p.Val242Ala
  variant of: http://identifiers.org/hgnc/18700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8771
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val276Ala
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45918
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5516
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9982
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.312138728323699e-4
allele num: 8650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.233e0

QD
type: SiteQuality
SIO_000300: 1.413e1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 3.892773e6

VQSLOD
type: SiteQuality
SIO_000300: 2.36e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

GenotypeQuality
all individuals: 378
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5653
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1363
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45917
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 280
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1712
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1257
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 8.012820512820513e-4
allele num: 9984
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.893946e6

FS
type: SiteQuality
SIO_000300: 1.199e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.303e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

GenotypeQuality
all individuals: 118
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1256
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1709
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45915
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1360
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50177209106746e-5
allele num: 66588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9986
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 5.188e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

QD
type: SiteQuality
SIO_000300: 1.278e1

DP
type: SiteQuality
SIO_000300: 3.897077e6

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1709
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45915
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1677
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5954
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1256
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50177209106746e-5
allele num: 66588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.002803925495694e-4
allele num: 9986
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 5.188e0

QD
type: SiteQuality
SIO_000300: 1.278e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 3.897077e6

MQ
type: SiteQuality
SIO_000300: 5.981e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

GenotypeQuality
all individuals: 1710
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 180
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46008
bin: 9.75e1
variant carriers: 1201

GenotypeQuality
all individuals: 1351
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1676
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6036
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 20
allele frequency: 2.003606491685033e-3
allele num: 9982
num of homozygotes: 0

Latino
type: Population
allele count: 38
allele frequency: 3.293465071936211e-3
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 10
allele frequency: 1.106194690265487e-2
allele num: 904
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 132
allele frequency: 1.996370235934664e-2
allele num: 6612
num of homozygotes: 1

East Asian
type: Population
allele count: 6
allele frequency: 6.936416184971098e-4
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 79
allele frequency: 4.823543778239101e-3
allele num: 16378
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 927
allele frequency: 1.392226360687252e-2
allele num: 66584
num of homozygotes: 5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.63e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 3.923716e6

FS
type: SiteQuality
SIO_000300: 1.194e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.07e-1

QD
type: SiteQuality
SIO_000300: 1.261e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

GenotypeQuality
all individuals: 6117
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1712
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.55e-1

MQ
type: SiteQuality
SIO_000300: 5.929e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 3.867237e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.282e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 1.69e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

GenotypeQuality
all individuals: 340
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1712
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6286
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1379
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1749
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9988
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 51
allele frequency: 3.109756097560976e-3
allele num: 16400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.56e-1

QD
type: SiteQuality
SIO_000300: 1.139e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.612e0

DP
type: SiteQuality
SIO_000300: 3.869204e6

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45764
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00318337437684e-5
allele num: 66596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

QD
type: SiteQuality
SIO_000300: 1.174e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.661e0

DP
type: SiteQuality
SIO_000300: 3.868949e6

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1761
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1280
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1383
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6459
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45763
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1712
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501501501501501e-5
allele num: 66600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9994
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.02e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

MQRankSum
type: SiteQuality
SIO_000300: 1.91e0

VQSLOD
type: SiteQuality
SIO_000300: 2.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.77e-1

DP
type: SiteQuality
SIO_000300: 3.869149e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.011e0

QD
type: SiteQuality
SIO_000300: 1.23e1

GenotypeQuality
all individuals: 65
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6493
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1760
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45769
bin: 9.75e1
variant carriers: 75

GenotypeQuality
all individuals: 860
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50154659299078e-5
allele num: 66598
num of homozygotes: 0

African
type: Population
allele count: 75
allele frequency: 7.497001199520192e-3
allele num: 10004
num of homozygotes: 1

Latino
type: Population
allele count: 2
allele frequency: 1.732501732501733e-4
allele num: 11544
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 1.396e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.05e0

DP
type: SiteQuality
SIO_000300: 3.871421e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.39e0

GenotypeQuality
all individuals: 1714
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1760
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45755
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1385
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501456412720339e-5
allele num: 66602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.124e1

MQRankSum
type: SiteQuality
SIO_000300: -2.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

DP
type: SiteQuality
SIO_000300: 3.866625e6

MQ
type: SiteQuality
SIO_000300: 5.951e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.41e-1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1278
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.504369238161016e-5
allele num: 66602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 3.866625e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.41e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.85e-1

QD
type: SiteQuality
SIO_000300: 1.124e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.67e-1

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1764
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45754
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501321162623108e-5
allele num: 66608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.84e-1

MQ
type: SiteQuality
SIO_000300: 5.765e1

MQRankSum
type: SiteQuality
SIO_000300: -1.863e0

QD
type: SiteQuality
SIO_000300: 9.4e0

DP
type: SiteQuality
SIO_000300: 3.866827e6

FS
type: SiteQuality
SIO_000300: 4.544e0

GenotypeQuality
all individuals: 264
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1280
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1778
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45752
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 6716
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1388
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.005493350944076e-5
allele num: 66626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10014
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.29e-1

FS
type: SiteQuality
SIO_000300: 1.748e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.243e1

DP
type: SiteQuality
SIO_000300: 3.868844e6

VQSLOD
type: SiteQuality
SIO_000300: 9.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.17e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45750
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1795
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1386
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500555205426008e-5
allele num: 66642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.28e-1

QD
type: SiteQuality
SIO_000300: 1.706e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: 2.58e-1

FS
type: SiteQuality
SIO_000300: 2.371e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e-1

DP
type: SiteQuality
SIO_000300: 3.869194e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1715
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6742
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1795
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45750
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1384
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 3.869426e6

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

MQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

FS
type: SiteQuality
SIO_000300: 3.815e0

QD
type: SiteQuality
SIO_000300: 1.421e1

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45750
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6761
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1807
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212709192335678e-4
allele num: 16492
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.870109e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.65e0

MQRankSum
type: SiteQuality
SIO_000300: 1.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -8.942e-1

QD
type: SiteQuality
SIO_000300: 1.365e1

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6741
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45750
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1389
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1805
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1719
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499970000599988e-5
allele num: 66668
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.931e1

FS
type: SiteQuality
SIO_000300: 5.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 1.556e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e-1

DP
type: SiteQuality
SIO_000300: 3.869982e6

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45750
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 236
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1800
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

MQ
type: SiteQuality
SIO_000300: 5.992e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.71e0

DP
type: SiteQuality
SIO_000300: 3.86993e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.629e0

VQSLOD
type: SiteQuality
SIO_000300: 2.63e-1

FS
type: SiteQuality
SIO_000300: 2.372e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e0

QD
type: SiteQuality
SIO_000300: 1.369e1

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1800
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6728
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e-1

MQ
type: SiteQuality
SIO_000300: 5.992e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.629e0

FS
type: SiteQuality
SIO_000300: 2.372e0

MQRankSum
type: SiteQuality
SIO_000300: 1.71e0

QD
type: SiteQuality
SIO_000300: 1.369e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e0

DP
type: SiteQuality
SIO_000300: 3.86993e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6744
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1292
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.500525036752572e-5
allele num: 66662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.173e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

MQRankSum
type: SiteQuality
SIO_000300: 4.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.96e-2

DP
type: SiteQuality
SIO_000300: 3.869905e6

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.45e0

QD
type: SiteQuality
SIO_000300: 1.736e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.97e-1

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1800
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.500720115218435e-5
allele num: 66656
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.685e1

DP
type: SiteQuality
SIO_000300: 3.869448e6

MQ
type: SiteQuality
SIO_000300: 5.947e1

VQSLOD
type: SiteQuality
SIO_000300: 9.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.95e-1

GenotypeQuality
all individuals: 717
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1719
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6678
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45749
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1391
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.171e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.203e0

VQSLOD
type: SiteQuality
SIO_000300: -2.664e0

DP
type: SiteQuality
SIO_000300: 3.86903e6

GenotypeQuality
all individuals: 1288
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1796
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1719
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45749
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 864
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6663
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.975124378109452e-4
allele num: 10050
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

MQ
type: SiteQuality
SIO_000300: 6.028e1

MQRankSum
type: SiteQuality
SIO_000300: 6.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.11e-1

DP
type: SiteQuality
SIO_000300: 3.868666e6

FS
type: SiteQuality
SIO_000300: 4.562e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.1e-2

QD
type: SiteQuality
SIO_000300: 1.456e1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1720
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6639
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1791
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10038
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.868541e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.61e-1

QD
type: SiteQuality
SIO_000300: 1.623e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.522e0

FS
type: SiteQuality
SIO_000300: 3.357e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.29e-1

GenotypeQuality
all individuals: 137
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1720
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45742
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6114
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9998
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501456412720339e-5
allele num: 66602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.33e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.091e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.06e-1

DP
type: SiteQuality
SIO_000300: 3.863401e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.258e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.66e-1

QD
type: SiteQuality
SIO_000300: 1.442e1

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1283
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45744
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 318
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.083465141744738e-5
allele num: 16438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.838e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

FS
type: SiteQuality
SIO_000300: 3.074e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.74e-1

DP
type: SiteQuality
SIO_000300: 3.862497e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 1.324e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.242e0

GenotypeQuality
all individuals: 112
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1386
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5923
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50154659299078e-5
allele num: 66598
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.861671e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.069e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e0

QD
type: SiteQuality
SIO_000300: 1.162e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.48e0

VQSLOD
type: SiteQuality
SIO_000300: 3.5e-2

GenotypeQuality
all individuals: 5881
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1678
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45740
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1720
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9956
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502403846153846e-5
allele num: 66560
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 5.415e0

MQRankSum
type: SiteQuality
SIO_000300: -1.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.271e0

DP
type: SiteQuality
SIO_000300: 3.861824e6

VQSLOD
type: SiteQuality
SIO_000300: 5.06e-1

QD
type: SiteQuality
SIO_000300: 2.409e1

MQ
type: SiteQuality
SIO_000300: 3.729e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-1

GenotypeQuality
all individuals: 1280
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5917
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1680
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1717
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 6.702412868632708e-4
allele num: 16412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9950
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: 5.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.24e-1

QD
type: SiteQuality
SIO_000300: 1.544e1

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

FS
type: SiteQuality
SIO_000300: 5.21e-1

DP
type: SiteQuality
SIO_000300: 3.8615e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e0

GenotypeQuality
all individuals: 293
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6044
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1688
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45744
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501681883709755e-5
allele num: 66592
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

QD
type: SiteQuality
SIO_000300: 1.048e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.745e0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 8.853e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

DP
type: SiteQuality
SIO_000300: 3.861586e6

MQ
type: SiteQuality
SIO_000300: 6.005e1

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45745
bin: 9.75e1
variant carriers: 8

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.263613107564868e-4
allele num: 16418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.65e0

VQSLOD
type: SiteQuality
SIO_000300: 1.65e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

MQRankSum
type: SiteQuality
SIO_000300: 8.7e-1

DP
type: SiteQuality
SIO_000300: 3.863163e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.7e-2

FS
type: SiteQuality
SIO_000300: 4.513e0

QD
type: SiteQuality
SIO_000300: 1.713e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.74e-1

GenotypeQuality
all individuals: 86
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1688
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45745
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1385
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.601456815816858e-4
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.689e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.4e-2

QD
type: SiteQuality
SIO_000300: 1.395e1

FS
type: SiteQuality
SIO_000300: 5.219e0

DP
type: SiteQuality
SIO_000300: 3.86321e6

MQ
type: SiteQuality
SIO_000300: 5.939e1

GenotypeQuality
all individuals: 685
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6320
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501366243281386e-5
allele num: 66606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.91e0

FS
type: SiteQuality
SIO_000300: 1.189e0

MQRankSum
type: SiteQuality
SIO_000300: 9.84e-1

DP
type: SiteQuality
SIO_000300: 3.863462e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.13e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.427e1

GenotypeQuality
all individuals: 82
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45745
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1386
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.50683121640693e-5
allele num: 66606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.189e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.77e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
SIO_000300: 3.863462e6

QD
type: SiteQuality
SIO_000300: 1.427e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.13e-1

GenotypeQuality
all individuals: 685
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1386
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45745
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6330
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.670019074041963e-5
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9974
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.584e0

VQSLOD
type: SiteQuality
SIO_000300: 1.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.066e0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

QD
type: SiteQuality
SIO_000300: 1.383e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQ
type: SiteQuality
SIO_000300: 5.916e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

DP
type: SiteQuality
SIO_000300: 3.86324e6

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45746
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1386
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501321162623108e-5
allele num: 66608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.27e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

QD
type: SiteQuality
SIO_000300: 1.288e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

FS
type: SiteQuality
SIO_000300: 3.579e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.74e-1

DP
type: SiteQuality
SIO_000300: 3.864015e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.51e-1

GenotypeQuality
all individuals: 1717
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 868
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6718
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1388
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501140867058965e-5
allele num: 66616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.33e-1

FS
type: SiteQuality
SIO_000300: 5.629999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.92e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.955e0

QD
type: SiteQuality
SIO_000300: 1.329e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.497e-1

DP
type: SiteQuality
SIO_000300: 3.866526e6

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6822
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1386
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45746
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1717
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1718
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.105751618024179e-5
allele num: 16378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.67e-1

DP
type: SiteQuality
SIO_000300: 3.867698e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.625e0

FS
type: SiteQuality
SIO_000300: 5.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.1e0

QD
type: SiteQuality
SIO_000300: 1.13e1

MQ
type: SiteQuality
SIO_000300: 5.982e1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1717
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1720
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45746
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1387
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6846
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.106497313141182e-5
allele num: 16376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.8e-1

QD
type: SiteQuality
SIO_000300: 8.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.433e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

FS
type: SiteQuality
SIO_000300: 1.333e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 3.867633e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

MQRankSum
type: SiteQuality
SIO_000300: -1.79e-1

GenotypeQuality
all individuals: 279
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1272
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1715
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45745
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66616
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.337e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

QD
type: SiteQuality
SIO_000300: 1.609e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 8.459e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.99e-1

DP
type: SiteQuality
SIO_000300: 3.867884e6

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6798
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1272
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45744
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1385
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.57e0

MQRankSum
type: SiteQuality
SIO_000300: -6.99e-1

FS
type: SiteQuality
SIO_000300: 5.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.66e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.867507e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

QD
type: SiteQuality
SIO_000300: 1.55e1

GenotypeQuality
all individuals: 326
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45744
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501456412720339e-5
allele num: 66602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.24e-1

FS
type: SiteQuality
SIO_000300: 8.070000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: -3.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.398e0

DP
type: SiteQuality
SIO_000300: 3.866924e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-2

QD
type: SiteQuality
SIO_000300: 1.283e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.978e1

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1383
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6670
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45745
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1666
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502133028901039e-5
allele num: 66572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.871e0

MQRankSum
type: SiteQuality
SIO_000300: 9.3e-1

MQ
type: SiteQuality
SIO_000300: 5.91e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 3.86506e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e-1

QD
type: SiteQuality
SIO_000300: 9.130000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -2.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.915e0

GenotypeQuality
all individuals: 669
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45745
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5702
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1585
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 863
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1242
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504211793020457e-5
allele num: 66480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16100
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.924e1

QD
type: SiteQuality
SIO_000300: 1.195e1

DP
type: SiteQuality
SIO_000300: 3.852588e6

MQRankSum
type: SiteQuality
SIO_000300: 1.73e0

VQSLOD
type: SiteQuality
SIO_000300: -1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
SIO_000300: 6.645e0

GenotypeQuality
all individuals: 1568
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1375
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5343
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1235
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504981488727689e-5
allele num: 66446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16052
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

DP
type: SiteQuality
SIO_000300: 3.848543e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.49e0

QD
type: SiteQuality
SIO_000300: 1.608e1

GenotypeQuality
all individuals: 261
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5054
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1069
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1231
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1373
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45743
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16006
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66434
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

VQSLOD
type: SiteQuality
SIO_000300: 3.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

DP
type: SiteQuality
SIO_000300: 3.845342e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

QD
type: SiteQuality
SIO_000300: 1.334e1

FS
type: SiteQuality
SIO_000300: 2.292e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1343
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1361
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1256
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3193
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15854
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.474635163307853e-4
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66380
num of homozygotes: 0

African
type: Population
allele count: 82
allele frequency: 7.981312049834533e-3
allele num: 10274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.31e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.824158e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

QD
type: SiteQuality
SIO_000300: 1.635e1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.99e-1

GenotypeQuality
all individuals: 1051
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1162
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1711
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1016
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45731
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 573
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15594
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.885815185403178e-4
allele num: 10194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66200
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.118568232662192e-3
allele num: 894
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

DP
type: SiteQuality
SIO_000300: 3.815058e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 1.658e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

QD
type: SiteQuality
SIO_000300: 1.566e1

GenotypeQuality
all individuals: 1115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6580
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2537
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2130
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3044
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23261
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1941
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7003
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.768853034023149e-5
allele num: 11404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.668e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-2

FS
type: SiteQuality
SIO_000300: 3.497e0

QD
type: SiteQuality
SIO_000300: 1.138e1

MQRankSum
type: SiteQuality
SIO_000300: -2.4e-2

DP
type: SiteQuality
SIO_000300: 1.693611e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.68e-1

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1545
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1058
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1031
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3024
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2371
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26524
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1822
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2140
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7004
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6674
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530549773478634e-5
allele num: 65336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.710175e6

MQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.222e0

QD
type: SiteQuality
SIO_000300: 1.431e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3039
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1698
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2148
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1434
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2373
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7025
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 27865
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 420
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.095702529716549e-4
allele num: 6562
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.887817703768624e-4
allele num: 11410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.682008624116945e-4
allele num: 65398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.616e1

MQ
type: SiteQuality
SIO_000300: 6.069e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.91e0

FS
type: SiteQuality
SIO_000300: 6.96e-1

DP
type: SiteQuality
SIO_000300: 1.724366e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.77e-1

GenotypeQuality
all individuals: 1210
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30351
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3073
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1444
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7013
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 98
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65552
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.764241893076249e-5
allele num: 11410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.67e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.57e-1

DP
type: SiteQuality
SIO_000300: 1.747577e6

FS
type: SiteQuality
SIO_000300: 8.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

QD
type: SiteQuality
SIO_000300: 1.827e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 7016
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2401
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30447
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6881
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.762705923589205e-5
allele num: 11412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.947533896639811e-4
allele num: 10178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15398
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

QD
type: SiteQuality
SIO_000300: 1.075e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.64e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

FS
type: SiteQuality
SIO_000300: 4.82e-1

DP
type: SiteQuality
SIO_000300: 1.751511e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

GenotypeQuality
all individuals: 999
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3125
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2431
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31664
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 906
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7025
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522394421946838e-5
allele num: 65686
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.761618e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.247e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.398e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.625e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-2

QD
type: SiteQuality
SIO_000300: 1.167e1

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32367
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7094
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1235
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3159
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7030
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1463
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519895431194334e-5
allele num: 65794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

FS
type: SiteQuality
SIO_000300: 3.424e0

DP
type: SiteQuality
SIO_000300: 1.768618e6

QD
type: SiteQuality
SIO_000300: 5.95e0

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.637e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.256e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.64e0

GenotypeQuality
all individuals: 608
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7114
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1145
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32736
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2455
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.736676568233443e-5
allele num: 11446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65844
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.39e-1

MQ
type: SiteQuality
SIO_000300: 6.024e1

FS
type: SiteQuality
SIO_000300: 1.018e0

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.53e-1

DP
type: SiteQuality
SIO_000300: 1.77489e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

QD
type: SiteQuality
SIO_000300: 1.05e1

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1473
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3197
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7226
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2490
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33921
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16034
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16198001394376e-4
allele num: 8606
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -8.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e-1

FS
type: SiteQuality
SIO_000300: 1.385e0

QD
type: SiteQuality
SIO_000300: 1.041e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.34e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

DP
type: SiteQuality
SIO_000300: 1.791534e6

GenotypeQuality
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3212
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1477
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2247
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34823
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7316
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505797319680771e-5
allele num: 66410
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.73e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

DP
type: SiteQuality
SIO_000300: 1.808735e6

FS
type: SiteQuality
SIO_000300: 7.781e0

VQSLOD
type: SiteQuality
SIO_000300: -2.053e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.619e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.36e-1

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7041
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3237
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2555
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7406
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1482
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158480074142725e-4
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66560
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.248e0

QD
type: SiteQuality
SIO_000300: 1.371e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.938e1

DP
type: SiteQuality
SIO_000300: 1.813024e6

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

FS
type: SiteQuality
SIO_000300: 9.47e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.95e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.66e-1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7407
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1481
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3240
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501907422426482e-5
allele num: 66582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.038e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.9e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

DP
type: SiteQuality
SIO_000300: 1.814063e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.163e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.899e1

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-2

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7407
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1481
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2548
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3240
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.9e-1

DP
type: SiteQuality
SIO_000300: 1.814063e6

MQ
type: SiteQuality
SIO_000300: 5.899e1

QD
type: SiteQuality
SIO_000300: 1.038e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.163e0

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-2

GenotypeQuality
all individuals: 7044
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3240
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1481
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2548
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66582
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.9e-1

DP
type: SiteQuality
SIO_000300: 1.814063e6

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.038e1

MQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.163e0

MQ
type: SiteQuality
SIO_000300: 5.899e1

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2254
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1485
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2546
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3236
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7046
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500870504892838e-5
allele num: 66628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-2

DP
type: SiteQuality
SIO_000300: 1.815477e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.548e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.74e0

MQRankSum
type: SiteQuality
SIO_000300: 1.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

QD
type: SiteQuality
SIO_000300: 1.101e1

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3235
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7436
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2258
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7047
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1025
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500690317546071e-5
allele num: 66636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.84e-1

QD
type: SiteQuality
SIO_000300: 1.366e1

FS
type: SiteQuality
SIO_000300: 1.841e0

DP
type: SiteQuality
SIO_000300: 1.815764e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 7435
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35304
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3237
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2541
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2257
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7046
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500645277469312e-5
allele num: 66638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.006e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.315e0

MQRankSum
type: SiteQuality
SIO_000300: -4.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.63e-1

DP
type: SiteQuality
SIO_000300: 1.815662e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.35e-1

QD
type: SiteQuality
SIO_000300: 1.579e1

GenotypeQuality
all individuals: 7050
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3210
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7333
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34736
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1480
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1022
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.518833535844471e-4
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.821051353648173e-4
allele num: 16474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.087e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.85e-1

QD
type: SiteQuality
SIO_000300: 9.949999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

MQRankSum
type: SiteQuality
SIO_000300: 9.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

DP
type: SiteQuality
SIO_000300: 1.815304e6

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7334
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1022
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34838
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2260
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1480
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3208
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501456412720339e-5
allele num: 66602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.593e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e-1

FS
type: SiteQuality
SIO_000300: 4.293e0

MQRankSum
type: SiteQuality
SIO_000300: -4.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.713e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.815232e6

GenotypeQuality
all individuals: 7049
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2258
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2507
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1022
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7312
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158480074142725e-4
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.504369238161016e-5
allele num: 66602
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 1.161e1

FS
type: SiteQuality
SIO_000300: 1.761e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.26e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

DP
type: SiteQuality
SIO_000300: 1.814871e6

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

GenotypeQuality
all individuals: 2499
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35023
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2257
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3204
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.507056633235242e-5
allele num: 66604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.81498e6

FS
type: SiteQuality
SIO_000300: 5.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-2

QD
type: SiteQuality
SIO_000300: 1.315e1

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.449e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e-1