6-29589500-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589500
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589500
    reference: chr 6
allele count: 1
allele frequency: 8.248647221855616e-6
allele num: 121232
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*653+29A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1131+29A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1131+29A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.780+29A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.532+29A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.780+29A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.945+29A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1131+29A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*689+29A>G
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17473
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2999
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

6-29589501-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589501
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589500
    reference: chr 6
allele count: 601
allele frequency: 4.957109864731112e-3
allele num: 121240
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1131+27delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.780+27delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.532+27delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*689+27delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1131+27delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1131+27delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*653+27delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.945+27delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.780+27delG
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22004
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 4.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 4.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6900
  bin: 3.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 5674
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 17456
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 5.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10504
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 6
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: GC
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

6-29589506-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589506
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589505
    reference: chr 6
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*653+22delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1131+22delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1131+22delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.532+22delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.945+22delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*689+22delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1131+22delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.780+22delG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.780+22delG
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5758
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3288
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6180
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3585
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: TC
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

6-29589516-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589516
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589516
    reference: chr 6
allele count: 1
allele frequency: 8.244974687927709e-6
allele num: 121286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.945+13C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1131+13C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.780+13C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.780+13C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1131+13C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1131+13C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*653+13C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.532+13C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*689+13C>A
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22321
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2997
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1869
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/6-29589519-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589519
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589519
    reference: chr 6
allele count: 5
allele frequency: 4.121943578836293e-5
allele num: 121302
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*689+10G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.780+10G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1131+10G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1131+10G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*653+10G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.532+10G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1131+10G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.780+10G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.945+10G>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1870
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6175
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/6-29589522-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589522
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589522
    reference: chr 6
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.945+7T>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.780+7T>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*653+7T>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.532+7T>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1131+7T>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1131+7T>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*689+7T>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1131+7T>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.780+7T>G
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17661
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
hgvs: c.1131+7T>G
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

6-29589544-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589544
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589544
    reference: chr 6
allele count: 2
allele frequency: 1.648804616652927e-5
allele num: 121300
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*638G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.930G>C
  hgvsp: ENST00000377016.4:c.930G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1116G>C
  hgvsp: ENST00000377034.4:c.1116G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1116G>C
  hgvsp: ENST00000494877.1:c.1116G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*674G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1116G>C
  hgvsp: ENST00000376977.3:c.1116G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.765G>C
  hgvsp: ENST00000377012.4:c.765G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.765G>C
  hgvsp: ENST00000355973.3:c.765G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.517G>C
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg372Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum

6-29589547-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589547
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589547
    reference: chr 6
allele count: 346
allele frequency: 2.85262012333872e-3
allele num: 121292
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.514C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1113C>T
  hgvsp: ENST00000494877.1:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.762C>T
  hgvsp: ENST00000377012.4:c.762C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.762C>T
  hgvsp: ENST00000355973.3:c.762C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*671C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1113C>T
  hgvsp: ENST00000376977.3:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1113C>T
  hgvsp: ENST00000377034.4:c.1113C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.927C>T
  hgvsp: ENST00000377016.4:c.927C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*635C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5780
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.75e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 6891
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 5.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 17601
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22372
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4284
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala371Ala
num of homozygotes: 8
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

6-29589559-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589559
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589559
    reference: chr 6
allele count: 3
allele frequency: 2.473981956424931e-5
allele num: 121262
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.750T>C
  hgvsp: ENST00000377012.4:c.750T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1101T>C
  hgvsp: ENST00000377034.4:c.1101T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.915T>C
  hgvsp: ENST00000377016.4:c.915T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*623T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*659T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1101T>C
  hgvsp: ENST00000376977.3:c.1101T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1101T>C
  hgvsp: ENST00000494877.1:c.1101T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.750T>C
  hgvsp: ENST00000355973.3:c.750T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.502T>C
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6912
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2988
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Tyr367Tyr
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

6-29589593-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589593
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589593
    reference: chr 6
allele count: 1
allele frequency: 8.262141216517673e-6
allele num: 121034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.881G>A
  hgvsp: ENSP00000366215.4:p.Arg294His
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*589G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1067G>A
  hgvsp: ENSP00000366233.4:p.Arg356His
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1067G>A
  hgvsp: ENSP00000366176.3:p.Arg356His
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1067G>A
  hgvsp: ENSP00000419061.1:p.Arg356His
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*405G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.468G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.716G>A
  hgvsp: ENSP00000366211.4:p.Arg239His
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.716G>A
  hgvsp: ENSP00000348248.3:p.Arg239His
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*625G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.647G>A
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg356His
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

6-29589603-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589603
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589603
    reference: chr 6
allele count: 1
allele frequency: 8.273762245168123e-6
allele num: 120864
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*588-9C>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.880-9C>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.715-9C>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.646-9C>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1066-9C>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1066-9C>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1066-9C>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.715-9C>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*404-9C>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.467-9C>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*624-9C>G
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

6-29589614-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589614
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589614
    reference: chr 6
allele count: 1
allele frequency: 8.303165166561494e-6
allele num: 120436
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*588-20T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1066-20T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.467-20T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.646-20T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1066-20T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.880-20T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1066-20T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*624-20T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.715-20T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.715-20T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*404-20T>A
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD

6-29589621-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589621
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589621
    reference: chr 6
allele count: 1
allele frequency: 8.325424180361989e-6
allele num: 120114
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1066-27C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1066-27C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*404-27C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.715-27C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1066-27C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.715-27C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.880-27C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.467-27C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*624-27C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.646-27C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*588-27C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3142
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

6-29589631-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589631
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589631
    reference: chr 6
allele count: 1
allele frequency: 8.377033524888167e-6
allele num: 119374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.880-37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.646-37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*588-37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1066-37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1066-37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1066-37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.467-37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.715-37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*404-37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.715-37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*624-37G>A
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5458
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4072
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11075
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7559
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

6-29589632-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589632
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589632
    reference: chr 6
allele count: 1
allele frequency: 8.388980235562565e-6
allele num: 119204
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1066-38C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.646-38C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.880-38C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.467-38C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1066-38C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.715-38C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*624-38C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.715-38C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*404-38C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1066-38C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*588-38C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4073
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5381
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

6-29589634-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589634
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589634
    reference: chr 6
allele count: 2
allele frequency: 1.676052561008313e-5
allele num: 119328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.467-40C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*404-40C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.646-40C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*588-40C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1066-40C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.880-40C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1066-40C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*624-40C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.715-40C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1066-40C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.715-40C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8925
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5321
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15685
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10181
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

6-29589840-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589840
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589840
    reference: chr 6
allele count: 2
allele frequency: 1.663450662053363e-5
allele num: 120232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*623+41C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.645+41C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1065+41C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.879+41C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1065+41C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.714+41C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*587+41C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.466+41C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1065+41C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*403+41C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.714+41C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ

6-29589844-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589844
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589844
    reference: chr 6
allele count: 2
allele frequency: 1.661764461505226e-5
allele num: 120354
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.714+37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1065+37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*587+37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1065+37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.466+37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*403+37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.714+37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*623+37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.645+37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1065+37G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.879+37G>A
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

6-29589847-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589847
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589847
    reference: chr 6
allele count: 9
allele frequency: 7.478810038225029e-5
allele num: 120340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*403+34G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.645+34G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1065+34G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.879+34G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1065+34G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.466+34G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*587+34G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1065+34G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.714+34G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.714+34G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*623+34G>A
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23338
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22097
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7244
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

6-29589848-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589848
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589848
    reference: chr 6
allele count: 12
allele frequency: 9.970255404709283e-5
allele num: 120358
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1065+33C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1065+33C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.714+33C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.714+33C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.879+33C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*623+33C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1065+33C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.466+33C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*587+33C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*403+33C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.645+33C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23588
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22302
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7327
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

6-29589858-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589858
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589858
    reference: chr 6
allele count: 1
allele frequency: 8.288849839196314e-6
allele num: 120644
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.714+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.879+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*587+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.714+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1065+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1065+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*623+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.645+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.466+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1065+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*403+23G>A
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD

6-29589859-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589859
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589859
    reference: chr 6
allele count: 1
allele frequency: 8.28349430923941e-6
allele num: 120722
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.714+22G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.879+22G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1065+22G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*623+22G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.466+22G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*587+22G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1065+22G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1065+22G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.714+22G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.645+22G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*403+22G>A
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-29589868-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589868
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589868
    reference: chr 6
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*587+13G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.645+13G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.714+13G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.714+13G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1065+13G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1065+13G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.466+13G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1065+13G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.879+13G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*623+13G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*403+13G>A
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25496
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7564
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/6-29589872-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589872
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589872
    reference: chr 6
allele count: 1
allele frequency: 8.264189613566494e-6
allele num: 121004
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.466+9G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1065+9G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1065+9G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.879+9G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*403+9G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.714+9G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.714+9G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*623+9G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.645+9G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1065+9G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*587+9G>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD

6-29589875-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589875
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589875
    reference: chr 6
allele count: 5
allele frequency: 4.129705799758825e-5
allele num: 121074
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*403+6A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.466+6A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1065+6A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1065+6A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1065+6A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.714+6A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*623+6A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*587+6A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.645+6A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.879+6A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.714+6A>G
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7575
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1065+6A>G
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

6-29589877-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589877
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589877
    reference: chr 6
allele count: 1
allele frequency: 8.257092842751923e-6
allele num: 121108
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.879+4A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*623+4A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1065+4A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.466+4A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1065+4A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*587+4A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.714+4A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.714+4A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*403+4A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1065+4A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.645+4A>G
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25866
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1065+4A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

6-29589879-ACCTT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589879
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589875
    reference: chr 6
allele count: 1
allele frequency: 8.255320554097116e-6
allele num: 121134
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1063_1065+1delAAGG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.712_714+1delAAGG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.643_645+1delAAGG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1063_1065+1delAAGG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1063_1065+1delAAGG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*621_*623+1delAAGG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*585_*587+1delAAGG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.877_879+1delAAGG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.464_466+1delAAGG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.712_714+1delAAGG
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*401_*403+1delAAGG
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1063_1065+1delAAGG
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: ACCTT
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

6-29589885-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589885
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589885
    reference: chr 6
allele count: 1
allele frequency: 8.251505899826718e-6
allele num: 121190
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.710T>C
  hgvsp: ENSP00000348248.3:p.Leu237Pro
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.710T>C
  hgvsp: ENSP00000366211.4:p.Leu237Pro
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.875T>C
  hgvsp: ENSP00000366215.4:p.Leu292Pro
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1061T>C
  hgvsp: ENSP00000366233.4:p.Leu354Pro
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.462T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1061T>C
  hgvsp: ENSP00000419061.1:p.Leu354Pro
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*583T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*619T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.641T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1061T>C
  hgvsp: ENSP00000366176.3:p.Leu354Pro
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*399T>C
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu354Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP

6-29589887-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589887
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589886
    reference: chr 6
allele count: 1
allele frequency: 8.250961236984109e-6
allele num: 121198
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1058delA
  hgvsp: ENSP00000366176.3:p.Asn353ThrfsTer2
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.638delA
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1058delA
  hgvsp: ENSP00000419061.1:p.Asn353ThrfsTer2
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1058delA
  hgvsp: ENSP00000366233.4:p.Asn353ThrfsTer2
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.872delA
  hgvsp: ENSP00000366215.4:p.Asn291ThrfsTer2
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*616delA
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.707delA
  hgvsp: ENSP00000348248.3:p.Asn236ThrfsTer2
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.459delA
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*396delA
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.707delA
  hgvsp: ENSP00000366211.4:p.Asn236ThrfsTer2
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*580delA
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn353ThrfsTer2
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: GT
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

6-29589895-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589895
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589895
    reference: chr 6
allele count: 2
allele frequency: 1.649865535958819e-5
allele num: 121222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*573G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.700G>A
  hgvsp: ENSP00000366211.4:p.Val234Ile
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.865G>A
  hgvsp: ENSP00000366215.4:p.Val289Ile
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1051G>A
  hgvsp: ENSP00000366176.3:p.Val351Ile
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.700G>A
  hgvsp: ENSP00000348248.3:p.Val234Ile
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.452G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1051G>A
  hgvsp: ENSP00000366233.4:p.Val351Ile
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*609G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1051G>A
  hgvsp: ENSP00000419061.1:p.Val351Ile
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.631G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*389G>A
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7682
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val351Ile
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

6-29589896-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589896
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589896
    reference: chr 6
allele count: 1
allele frequency: 8.247286642694553e-6
allele num: 121252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.864C>T
  hgvsp: ENST00000377016.4:c.864C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1050C>T
  hgvsp: ENST00000377034.4:c.1050C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1050C>T
  hgvsp: ENST00000376977.3:c.1050C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.699C>T
  hgvsp: ENST00000355973.3:c.699C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*572C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1050C>T
  hgvsp: ENST00000494877.1:c.1050C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.699C>T
  hgvsp: ENST00000377012.4:c.699C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*388C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*608C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.451C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.630C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro350Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

6-29589902-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589902
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589902
    reference: chr 6
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.858T>C
  hgvsp: ENST00000377016.4:c.858T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.693T>C
  hgvsp: ENST00000377012.4:c.693T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*382T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*566T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.693T>C
  hgvsp: ENST00000355973.3:c.693T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1044T>C
  hgvsp: ENST00000376977.3:c.1044T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1044T>C
  hgvsp: ENST00000494877.1:c.1044T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1044T>C
  hgvsp: ENST00000377034.4:c.1044T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*602T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.624T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.445T>C
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7641
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala348Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

6-29589912-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589912
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589912
    reference: chr 6
allele count: 1
allele frequency: 8.244430886935875e-6
allele num: 121294
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.848C>T
  hgvsp: ENSP00000366215.4:p.Ser283Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.683C>T
  hgvsp: ENSP00000348248.3:p.Ser228Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*556C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1034C>T
  hgvsp: ENSP00000419061.1:p.Ser345Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.683C>T
  hgvsp: ENSP00000366211.4:p.Ser228Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1034C>T
  hgvsp: ENSP00000366233.4:p.Ser345Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.614C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*592C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*372C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1034C>T
  hgvsp: ENSP00000366176.3:p.Ser345Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.435C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23237
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser345Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

6-29589917-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589917
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589917
    reference: chr 6
allele count: 1
allele frequency: 8.244838730954422e-6
allele num: 121288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*367C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1029C>A
  hgvsp: ENSP00000366233.4:p.Phe343Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.843C>A
  hgvsp: ENSP00000366215.4:p.Phe281Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.678C>A
  hgvsp: ENSP00000366211.4:p.Phe226Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1029C>A
  hgvsp: ENSP00000419061.1:p.Phe343Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*551C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.609C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*587C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.430C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1029C>A
  hgvsp: ENSP00000366176.3:p.Phe343Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.678C>A
  hgvsp: ENSP00000348248.3:p.Phe226Leu
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe343Leu
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

6-29589931-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589931
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589931
    reference: chr 6
allele count: 1
allele frequency: 8.24715060946443e-6
allele num: 121254
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*353T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1015T>C
  hgvsp: ENSP00000419061.1:p.Phe339Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.416T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*573T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*537T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1015T>C
  hgvsp: ENSP00000366233.4:p.Phe339Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1015T>C
  hgvsp: ENSP00000366176.3:p.Phe339Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.664T>C
  hgvsp: ENSP00000348248.3:p.Phe222Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.829T>C
  hgvsp: ENSP00000366215.4:p.Phe277Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.664T>C
  hgvsp: ENSP00000366211.4:p.Phe222Leu
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.595T>C
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe339Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

6-29589940-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589940
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589940
    reference: chr 6
allele count: 1
allele frequency: 8.249191579225235e-6
allele num: 121224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.655G>A
  hgvsp: ENSP00000366211.4:p.Glu219Lys
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.1006G>A
  hgvsp: ENSP00000366233.4:p.Glu336Lys
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*528G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.407G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.655G>A
  hgvsp: ENSP00000348248.3:p.Glu219Lys
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.820G>A
  hgvsp: ENSP00000366215.4:p.Glu274Lys
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*344G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.1006G>A
  hgvsp: ENSP00000366176.3:p.Glu336Lys
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.1006G>A
  hgvsp: ENSP00000419061.1:p.Glu336Lys
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*564G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.586G>A
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu336Lys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum

6-29589961-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589961
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589961
    reference: chr 6
allele count: 1
allele frequency: 8.279927799029592e-6
allele num: 120774
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.634C>T
  hgvsp: ENSP00000366211.4:p.Arg212Ter
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.985C>T
  hgvsp: ENSP00000366233.4:p.Arg329Ter
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.985C>T
  hgvsp: ENSP00000419061.1:p.Arg329Ter
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.565C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*323C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.799C>T
  hgvsp: ENSP00000366215.4:p.Arg267Ter
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.985C>T
  hgvsp: ENSP00000366176.3:p.Arg329Ter
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.634C>T
  hgvsp: ENSP00000348248.3:p.Arg212Ter
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*543C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.386C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*507C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7636
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg329Ter
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum

6-29589968-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589968
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589968
    reference: chr 6
allele count: 1
allele frequency: 8.314487162431821e-6
allele num: 120272
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.792G>C
  hgvsp: ENST00000377016.4:c.792G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.627G>C
  hgvsp: ENST00000355973.3:c.627G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*316G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.978G>C
  hgvsp: ENST00000377034.4:c.978G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.379G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.978G>C
  hgvsp: ENST00000494877.1:c.978G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.978G>C
  hgvsp: ENST00000376977.3:c.978G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*500G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*536G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.558G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.627G>C
  hgvsp: ENST00000377012.4:c.627G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21700
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26491
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu326Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

6-29589971-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589971
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589971
    reference: chr 6
allele count: 1
allele frequency: 8.340283569641367e-6
allele num: 119900
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*497C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.975C>T
  hgvsp: ENST00000494877.1:c.975C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.975C>T
  hgvsp: ENST00000377034.4:c.975C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*313C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*533C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.624C>T
  hgvsp: ENST00000355973.3:c.624C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.789C>T
  hgvsp: ENST00000377016.4:c.789C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.376C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.624C>T
  hgvsp: ENST00000377012.4:c.624C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.975C>T
  hgvsp: ENST00000376977.3:c.975C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.555C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp325Asp
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

6-29589974-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589974
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589974
    reference: chr 6
allele count: 1
allele frequency: 8.343206127250579e-6
allele num: 119858
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*310C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.786C>T
  hgvsp: ENST00000377016.4:c.786C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.972C>T
  hgvsp: ENST00000377034.4:c.972C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.373C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.972C>T
  hgvsp: ENST00000494877.1:c.972C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.552C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.621C>T
  hgvsp: ENST00000377012.4:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.972C>T
  hgvsp: ENST00000376977.3:c.972C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*494C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*530C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.621C>T
  hgvsp: ENST00000355973.3:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7556
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21276
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp324Asp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD

6-29589977-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589977
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589977
    reference: chr 6
allele count: 1
allele frequency: 8.377594960038872e-6
allele num: 119366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.549G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.969G>A
  hgvsp: ENST00000377034.4:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.370G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.618G>A
  hgvsp: ENST00000377012.4:c.618G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*307G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.783G>A
  hgvsp: ENST00000377016.4:c.783G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*491G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*527G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.969G>A
  hgvsp: ENST00000494877.1:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.969G>A
  hgvsp: ENST00000376977.3:c.969G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.618G>A
  hgvsp: ENST00000355973.3:c.618G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7481
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu323Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

6-29589986-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589986
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589986
    reference: chr 6
allele count: 1
allele frequency: 8.52747552614524e-6
allele num: 117268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.964-4C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.964-4C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.544-4C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*302-4C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*486-4C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.613-4C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*522-4C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.964-4C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.361C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.778-4C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.613-4C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.964-4C>T
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: G
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

6-29589991-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29589991
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29589991
    reference: chr 6
allele count: 48
allele frequency: 4.140143869999482e-4
allele num: 115938
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.964-9C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.964-9C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.613-9C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*302-9C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.778-9C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.356C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.544-9C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.613-9C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*486-9C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*522-9C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.964-9C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6756
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 23083
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 16960
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD

6-29590000-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29590000
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29590000
    reference: chr 6
allele count: 4314
allele frequency: 3.825214137509089e-2
allele num: 112778
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.964-18T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.964-18T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.347T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.613-18T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*302-18T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.964-18T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.613-18T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.544-18T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*486-18T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*522-18T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.778-18T>A
  variant of: http://identifiers.org/hgnc/4070
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.75e1
  variant carriers: 181
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 13096
  bin: 1.25e1
  variant carriers: 127
genotype depth: GenotypeDepth
  all individuals: 12053
  bin: 2.25e1
  variant carriers: 824
genotype depth: GenotypeDepth
  all individuals: 18039
  bin: 2.75e1
  variant carriers: 823
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 6.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 3.75e1
  variant carriers: 477
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 271
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5888
  bin: 3.25e1
  variant carriers: 666
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 1.75e1
  variant carriers: 471
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.75e1
  variant carriers: 80
genotype quality: GenotypeQuality
num of homozygotes: 115
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP

6-29590003-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29590003
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29590003
    reference: chr 6
allele count: 1
allele frequency: 8.965875876414367e-6
allele num: 111534
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.613-21T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.544-21T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.964-21T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.613-21T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.344T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*522-21T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.964-21T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*302-21T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.964-21T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*486-21T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.778-21T>A
  variant of: http://identifiers.org/hgnc/4070
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16094
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10335
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

6-29590005-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29590005
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29590005
    reference: chr 6
allele count: 1
allele frequency: 8.973438621679828e-6
allele num: 111440
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.964-23C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.613-23C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.778-23C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.964-23C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.964-23C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*486-23C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*302-23C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.613-23C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.342C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*522-23C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.544-23C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5242
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4678
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17013
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-29590017-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29590017
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29590017
    reference: chr 6
allele count: 1
allele frequency: 9.37207122774133e-6
allele num: 106700
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.778-35G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.964-35G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.964-35G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.613-35G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.544-35G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.330G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*302-35G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*486-35G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.964-35G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.613-35G>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*522-35G>T
  variant of: http://identifiers.org/hgnc/4070
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8577
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21496
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

6-29590017-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29590017
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29590017
    reference: chr 6
allele count: 2
allele frequency: 1.874414245548266e-5
allele num: 106700
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.544-35G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.964-35G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*302-35G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*522-35G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.964-35G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*486-35G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.330G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.778-35G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.964-35G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.613-35G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.613-35G>A
  variant of: http://identifiers.org/hgnc/4070
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21496
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

6-29590018-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29590018
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29590018
    reference: chr 6
allele count: 5
allele frequency: 4.714935028195311e-5
allele num: 106046
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.964-36C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*302-36C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.544-36C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.613-36C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.613-36C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.964-36C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*522-36C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.329C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*486-36C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.964-36C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.778-36C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5759
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21491
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13311
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-29590027-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29590027
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29590027
    reference: chr 6
allele count: 2
allele frequency: 1.973593321360201e-5
allele num: 101338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*302-45C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*522-45C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.964-45C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.964-45C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.778-45C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.964-45C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.544-45C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.613-45C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.613-45C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.320C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*486-45C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15253
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20314
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

6-29590030-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29590030
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29590030
    reference: chr 6
allele count: 1
allele frequency: 1.002827974889188e-5
allele num: 99718
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.964-48C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.613-48C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.613-48C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*522-48C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.544-48C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.964-48C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.317C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.964-48C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*486-48C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.778-48C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*302-48C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15067
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19886
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9080
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

6-29590030-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29590030
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29590030
    reference: chr 6
allele count: 5
allele frequency: 5.014139874445937e-5
allele num: 99718
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.778-48C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*486-48C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.613-48C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.317C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.964-48C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.544-48C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.964-48C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.613-48C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*522-48C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*302-48C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.964-48C>A
  variant of: http://identifiers.org/hgnc/4070
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7628
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19886
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15067
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9080
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

6-29590031-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29590031
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29590031
    reference: chr 6
allele count: 6
allele frequency: 6.082108464267613e-5
allele num: 98650
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.544-49C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.613-49C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.964-49C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.316C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.964-49C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*522-49C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.778-49C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.613-49C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.964-49C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*486-49C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*302-49C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15011
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19789
  bin: 1.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

6-29590033-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29590033
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29590033
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 98042
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*522-51T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*486-51T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.544-51T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*302-51T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.613-51T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.778-51T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.964-51T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.613-51T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.314T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.964-51T>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.964-51T>A
  variant of: http://identifiers.org/hgnc/4070
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14909
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9518
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

6-29590033-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29590033
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29590032
    reference: chr 6
allele count: 10
allele frequency: 1.019971032822668e-4
allele num: 98042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000494634
  gene symbol: GABBR1
  hgvsc: ENST00000494634.1:n.313delA
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.778-52delA
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.964-52delA
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.544-52delA
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.613-52delA
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.613-52delA
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*522-52delA
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*486-52delA
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.964-52delA
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.964-52delA
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*302-52delA
  variant of: http://identifiers.org/hgnc/4070
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19614
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 14909
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9518
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: AT
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

6-29591033-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29591033
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29591033
    reference: chr 6
allele count: 27
allele frequency: 2.332291000811983e-4
allele num: 115766
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.963+49G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.612+49G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.777+49G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.612+49G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*301+49G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.963+49G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.963+49G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*485+49G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*521+49G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.543+49G>C
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12824
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2095
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8901
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24200
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 9.25e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

6-29591037-A-AGATGTGATTTTATGCTGGAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29591037
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29591057
    reference: chr 6
allele count: 3
allele frequency: 2.587813125388172e-5
allele num: 115928
alternate allele: AGATGTGATTTTATGCTGGAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 13514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24329
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8281
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2106
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

6-29591051-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29591051
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29591051
    reference: chr 6
allele count: 2
allele frequency: 1.719276528436834e-5
allele num: 116328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*485+31A>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.777+31A>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*521+31A>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.963+31A>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.963+31A>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.612+31A>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.963+31A>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.612+31A>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.543+31A>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*301+31A>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

6-29591057-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29591057
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29591057
    reference: chr 6
allele count: 4
allele frequency: 3.424540255470703e-5
allele num: 116804
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*521+25A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.543+25A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.777+25A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.963+25A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*485+25A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.963+25A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.963+25A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*301+25A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.612+25A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.612+25A>G
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8971
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15356
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24956
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

6-29591059-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29591059
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29591059
    reference: chr 6
allele count: 1458
allele frequency: 1.247198508152127e-2
allele num: 116902
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*521+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.612+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*485+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.963+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.963+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.777+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*301+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.543+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.963+23G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.612+23G>A
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8934
  bin: 3.25e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 1.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 4.25e1
  variant carriers: 135
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 24883
  bin: 2.75e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 15333
  bin: 2.25e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 4.75e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.25e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.75e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 3.75e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 5.75e1
  variant carriers: 97
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8269
  bin: 6.75e1
  variant carriers: 5
num of homozygotes: 70
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

6-29591100-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29591100
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29591100
    reference: chr 6
allele count: 65
allele frequency: 5.371900826446281e-4
allele num: 121000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*467C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.525C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.594C>A
  hgvsp: ENST00000355973.3:c.594C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.945C>A
  hgvsp: ENST00000376977.3:c.945C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.759C>A
  hgvsp: ENST00000377016.4:c.759C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*283C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*503C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.945C>A
  hgvsp: ENST00000494877.1:c.945C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.594C>A
  hgvsp: ENST00000377012.4:c.594C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.945C>A
  hgvsp: ENST00000377034.4:c.945C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26679
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9222
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr315Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

6-29591100-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29591100
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29591100
    reference: chr 6
allele count: 60
allele frequency: 4.958677685950413e-4
allele num: 121000
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*467C>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.945C>G
  hgvsp: ENST00000377034.4:c.945C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.594C>G
  hgvsp: ENST00000377012.4:c.594C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.945C>G
  hgvsp: ENST00000376977.3:c.945C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.759C>G
  hgvsp: ENST00000377016.4:c.759C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.525C>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*503C>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.594C>G
  hgvsp: ENST00000355973.3:c.594C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.945C>G
  hgvsp: ENST00000494877.1:c.945C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*283C>G
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9222
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 17957
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr315Thr
num of homozygotes: 1
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

6-29591101-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29591101
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29591101
    reference: chr 6
allele count: 1
allele frequency: 8.26255081468751e-6
allele num: 121028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*282C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.593C>A
  hgvsp: ENSP00000348248.3:p.Thr198Asn
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.944C>A
  hgvsp: ENSP00000366233.4:p.Thr315Asn
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.758C>A
  hgvsp: ENSP00000366215.4:p.Thr253Asn
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*502C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.944C>A
  hgvsp: ENSP00000366176.3:p.Thr315Asn
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.944C>A
  hgvsp: ENSP00000419061.1:p.Thr315Asn
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.593C>A
  hgvsp: ENSP00000366211.4:p.Thr198Asn
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*466C>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.524C>A
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26741
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr315Asn
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

6-29591106-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29591106
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29591106
    reference: chr 6
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.939G>A
  hgvsp: ENST00000494877.1:c.939G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.588G>A
  hgvsp: ENST00000377012.4:c.588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.939G>A
  hgvsp: ENST00000376977.3:c.939G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.588G>A
  hgvsp: ENST00000355973.3:c.588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*497G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*277G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.939G>A
  hgvsp: ENST00000377034.4:c.939G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*461G>A
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.753G>A
  hgvsp: ENST00000377016.4:c.753G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.519G>A
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26840
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8878
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln313Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum

6-29591115-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29591115
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29591115
    reference: chr 6
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.930T>C
  hgvsp: ENST00000377034.4:c.930T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*268T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.930T>C
  hgvsp: ENST00000494877.1:c.930T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*488T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.930T>C
  hgvsp: ENST00000376977.3:c.930T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.744T>C
  hgvsp: ENST00000377016.4:c.744T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.579T>C
  hgvsp: ENST00000355973.3:c.579T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*452T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.510T>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.579T>C
  hgvsp: ENST00000377012.4:c.579T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40848
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala310Ala
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS

6-29591132-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29591132
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29591132
    reference: chr 6
allele count: 3
allele frequency: 2.47255464345762e-5
allele num: 121332
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.493G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*471G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.913G>C
  hgvsp: ENSP00000419061.1:p.Gly305Arg
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.913G>C
  hgvsp: ENSP00000366176.3:p.Gly305Arg
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*251G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.562G>C
  hgvsp: ENSP00000348248.3:p.Gly188Arg
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.727G>C
  hgvsp: ENSP00000366215.4:p.Gly243Arg
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*435G>C
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.562G>C
  hgvsp: ENSP00000366211.4:p.Gly188Arg
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.913G>C
  hgvsp: ENSP00000366233.4:p.Gly305Arg
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17898
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26969
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly305Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

6-29591148-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29591148
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29591148
    reference: chr 6
allele count: 3
allele frequency: 2.472350876036327e-5
allele num: 121342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.477A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*455A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.897A>G
  hgvsp: ENST00000494877.1:c.897A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.546A>G
  hgvsp: ENST00000377012.4:c.546A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.711A>G
  hgvsp: ENST00000377016.4:c.711A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.897A>G
  hgvsp: ENST00000377034.4:c.897A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.546A>G
  hgvsp: ENST00000355973.3:c.546A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*419A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*235A>G
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.897A>G
  hgvsp: ENST00000376977.3:c.897A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26990
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys299Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

6-29591154-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 29591154
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 29591154
    reference: chr 6
allele count: 1
allele frequency: 8.241984669908513e-6
allele num: 121330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366211
  ensembl transcript: ENST00000377012
  gene symbol: GABBR1
  hgvsc: ENST00000377012.4:c.540C>T
  hgvsp: ENST00000377012.4:c.540C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417478
  ensembl transcript: ENST00000491829
  gene symbol: GABBR1
  hgvsc: ENST00000491829.1:c.*413C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000348248
  ensembl transcript: ENST00000355973
  gene symbol: GABBR1
  hgvsc: ENST00000355973.3:c.540C>T
  hgvsp: ENST00000355973.3:c.540C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366233
  ensembl transcript: ENST00000377034
  gene symbol: GABBR1
  hgvsc: ENST00000377034.4:c.891C>T
  hgvsp: ENST00000377034.4:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419061
  ensembl transcript: ENST00000494877
  gene symbol: GABBR1
  hgvsc: ENST00000494877.1:c.891C>T
  hgvsp: ENST00000494877.1:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000419356
  ensembl transcript: ENST00000472823
  gene symbol: GABBR1
  hgvsc: ENST00000472823.1:c.*449C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366215
  ensembl transcript: ENST00000377016
  gene symbol: GABBR1
  hgvsc: ENST00000377016.4:c.705C>T
  hgvsp: ENST00000377016.4:c.705C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000204681
  ensembl transcript: ENST00000477029
  gene symbol: GABBR1
  hgvsc: ENST00000477029.1:n.471C>T
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000366176
  ensembl transcript: ENST00000376977
  gene symbol: GABBR1
  hgvsc: ENST00000376977.3:c.891C>T
  hgvsp: ENST00000376977.3:c.891C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4070
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000204681
  ensembl protein: ENSP00000417663
  ensembl transcript: ENST00000485508
  gene symbol: GABBR1
  hgvsc: ENST00000485508.1:c.*229C>T
  variant of: http://identifiers.org/hgnc/4070
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2410
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg297Arg
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28826
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6378
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10544
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1868
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4322
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.669309611293753e-5
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.644e1

VQSLOD
type: SiteQuality
SIO_000300: 3.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

DP
type: SiteQuality
SIO_000300: 1.956217e6

MQRankSum
type: SiteQuality
SIO_000300: -5.15e-1

FS
type: SiteQuality
SIO_000300: 4.715e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.47e-1

GenotypeQuality
all individuals: 108
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6732
bin: 9.75e1
variant carriers: 594

GenotypeQuality
all individuals: 1342
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2966
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28821
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4261
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3540
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1847
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 433
allele frequency: 6.495454681827728e-3
allele num: 66662
num of homozygotes: 5

Latino
type: Population
allele count: 23
allele frequency: 1.987212718161396e-3
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 85
allele frequency: 5.150266602035871e-3
allele num: 16504
num of homozygotes: 1

Other
type: Population
allele count: 4
allele frequency: 4.415011037527594e-3
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 17
allele frequency: 1.644100580270793e-3
allele num: 10340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 39
allele frequency: 5.898366606170599e-3
allele num: 6612
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.1e0

FS
type: SiteQuality
SIO_000300: 1.265e0

MQRankSum
type: SiteQuality
SIO_000300: 3.38e-1

DP
type: SiteQuality
SIO_000300: 1.967003e6

QD
type: SiteQuality
SIO_000300: 1.297e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.14e-2

GenotypeQuality
all individuals: 2994
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10641
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4315
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1870
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29251
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.19e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.19e-1

QD
type: SiteQuality
SIO_000300: 9.66e0

VQSLOD
type: SiteQuality
SIO_000300: 1.94e0

FS
type: SiteQuality
SIO_000300: 2.846e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.11e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

DP
type: SiteQuality
SIO_000300: 1.945136e6

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10641
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6176
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3580
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29412
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1350
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.573e0

FS
type: SiteQuality
SIO_000300: 2.173e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.61e-1

DP
type: SiteQuality
SIO_000300: 1.94629e6

MQ
type: SiteQuality
SIO_000300: 5.922e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.86e-1

QD
type: SiteQuality
SIO_000300: 1.124e1

GenotypeQuality
all individuals: 10643
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2997
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4310
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29446
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.320027648176948e-4
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.93e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 4.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 1.946611e6

MQRankSum
type: SiteQuality
SIO_000300: -1.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.735e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.175e1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3578
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10643
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2997
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29429
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6169
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1870
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.31e-1

QD
type: SiteQuality
SIO_000300: 1.257e1

MQRankSum
type: SiteQuality
SIO_000300: -1.412e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-2

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.94658e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e-1

GenotypeQuality
all individuals: 6166
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10659
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2997
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29479
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4310
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1868
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3572
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.313743637204998e-4
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e-1

QD
type: SiteQuality
SIO_000300: 9.51e0

DP
type: SiteQuality
SIO_000300: 1.947238e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.014e0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 338

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728907330567082e-4
allele num: 11568
num of homozygotes: 0

South Asian
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allele count: 331
allele frequency: 2.005331394644372e-2
allele num: 16506
num of homozygotes: 8

East Asian
type: Population
allele count: 2
allele frequency: 2.313743637204998e-4
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.349527665317139e-4
allele num: 66690
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.83e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.76e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 1.193e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.960099e6

MQRankSum
type: SiteQuality
SIO_000300: 3.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.88e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499505054444011e-5
allele num: 66674
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.943895e6

VQSLOD
type: SiteQuality
SIO_000300: 4.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

MQRankSum
type: SiteQuality
SIO_000300: -4.64e-1

FS
type: SiteQuality
SIO_000300: 2.544e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

QD
type: SiteQuality
SIO_000300: 1.143e1

GenotypeDepth
all individuals: 42
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30
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GenotypeQuality
all individuals: 10600
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.942e1

VQSLOD
type: SiteQuality
SIO_000300: 3.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.28e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.01e-1

DP
type: SiteQuality
SIO_000300: 1.935665e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.357e1

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 57
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GenotypeQuality
all individuals: 5993
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16198001394376e-4
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.931e1

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e0

VQSLOD
type: SiteQuality
SIO_000300: 8.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.99e-1

DP
type: SiteQuality
SIO_000300: 1.926955e6

FS
type: SiteQuality
SIO_000300: 4.295e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.764e1

GenotypeQuality
all individuals: 178
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10039
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511213201958532e-5
allele num: 66172
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -4.0e-4

MQRankSum
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SIO_000300: 5.89e-1

ReadPosRankSum
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SIO_000300: 2.57e0

ClippingRankSum
type: SiteQuality
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VQSLOD
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SIO_000300: -6.526999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.186e0

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.722e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4051
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515610791148833e-5
allele num: 65980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
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South Asian
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
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Other
type: Population
allele count: 0
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
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BaseQRankSum
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DP
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FS
type: SiteQuality
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
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MQ
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SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3724
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.8833761612967e-5
allele num: 10118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.62e-1

InbreedingCoeff
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QD
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 8.03e-1

DP
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SIO_000300: 1.734952e6

VQSLOD
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ReadPosRankSum
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SIO_000300: 2.36e-1

MQ
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SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.528444349341241e-5
allele num: 65426
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10110
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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MQRankSum
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FS
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ClippingRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: 3.6e-3

QD
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BaseQRankSum
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SIO_000300: 2.12e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.093845216331505e-5
allele num: 16410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65522
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8364
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.736676568233443e-5
allele num: 11446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.93e1

MQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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QD
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DP
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FS
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BaseQRankSum
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SIO_000300: -2.738e0

ClippingRankSum
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SIO_000300: -4.67e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 1.945525291828794e-4
allele num: 10280
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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FS
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ReadPosRankSum
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DP
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QD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6504
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.018321209743141e-5
allele num: 66262
num of homozygotes: 0

Latino
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MQ
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SIO_000300: 6.0e1

BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 2
allele frequency: 1.223990208078335e-4
allele num: 16340
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

Latino
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allele frequency: 8.726003490401397e-5
allele num: 11460
num of homozygotes: 0

African
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allele frequency: 5.825242718446602e-4
allele num: 10300
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66264
num of homozygotes: 0

Other
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BaseQRankSum
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ReadPosRankSum
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FS
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QD
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ClippingRankSum
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VQSLOD
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DP
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MQRankSum
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16336
num of homozygotes: 0

African
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East Asian
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 12
allele frequency: 1.810719459198455e-4
allele num: 66272
num of homozygotes: 0

Latino
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num of homozygotes: 0

European (Finnish)
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QD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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VQSLOD
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FS
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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African
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Other
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European (Non-Finnish)
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allele frequency: 1.505570611261668e-5
allele num: 66420
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VQSLOD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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DP
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MQ
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InbreedingCoeff
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FS
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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African
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allele frequency: 9.689922480620155e-5
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European (Finnish)
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European (Non-Finnish)
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South Asian
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East Asian
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VQSLOD
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InbreedingCoeff
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MQRankSum
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FS
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QD
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MQ
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BaseQRankSum
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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African
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East Asian
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Other
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European (Finnish)
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VQSLOD
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DP
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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QD
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MQ
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FS
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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European (Non-Finnish)
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Latino
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African
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South Asian
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East Asian
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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DP
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MQRankSum
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FS
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.668515950069348e-5
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 6.005284650492433e-5
allele num: 66608
num of homozygotes: 0

African
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East Asian
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South Asian
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Other
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FS
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DP
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QD
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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MQRankSum
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MQ
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 66626
num of homozygotes: 0

African
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Other
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South Asian
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European (Finnish)
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East Asian
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Latino
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ReadPosRankSum
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MQRankSum
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VQSLOD
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DP
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QD
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ClippingRankSum
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FS
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InbreedingCoeff
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MQ
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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East Asian
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Latino
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African
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European (Finnish)
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Other
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QD
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VQSLOD
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FS
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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East Asian
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQ
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QD
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VQSLOD
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InbreedingCoeff
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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Latino
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East Asian
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Other
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European (Non-Finnish)
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InbreedingCoeff
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FS
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MQRankSum
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QD
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ReadPosRankSum
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DP
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ClippingRankSum
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MQ
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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East Asian
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European (Finnish)
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Latino
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African
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European (Non-Finnish)
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ReadPosRankSum
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InbreedingCoeff
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MQ
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FS
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QD
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DP
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VQSLOD
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Other
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African
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South Asian
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Latino
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FS
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VQSLOD
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DP
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QD
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ClippingRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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Latino
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VQSLOD
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MQRankSum
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ReadPosRankSum
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FS
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QD
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ClippingRankSum
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MQ
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InbreedingCoeff
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Latino
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Other
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European (Finnish)
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European (Non-Finnish)
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African
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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MQ
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QD
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DP
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ClippingRankSum
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FS
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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East Asian
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VQSLOD
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FS
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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South Asian
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ClippingRankSum
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InbreedingCoeff
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QD
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VQSLOD
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MQRankSum
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DP
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MQ
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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Latino
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South Asian
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European (Non-Finnish)
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -1.0e-4

QD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.46e-1

MQRankSum
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SIO_000300: 3.06e-1

FS
type: SiteQuality
SIO_000300: 1.3839e1

VQSLOD
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SIO_000300: -1.918e0

MQ
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SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 1.613726e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.847e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503940323647958e-5
allele num: 66492
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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MQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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MQ
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SIO_000300: 5.895e1

FS
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QD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.69e-1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.745845723281441e-5
allele num: 11434
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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SIO_000300: 2.937e1

ReadPosRankSum
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ClippingRankSum
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VQSLOD
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FS
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InbreedingCoeff
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MQ
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SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -5.91e-1

DP
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SIO_000300: 1.596287e6

MQRankSum
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SIO_000300: 1.03e0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.175889328063241e-5
allele num: 16192
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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FS
type: SiteQuality
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InbreedingCoeff
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QD
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MQ
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VQSLOD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.513454611496201e-5
allele num: 66074
num of homozygotes: 0

East Asian
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Latino
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allele frequency: 0.0e0
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South Asian
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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VQSLOD
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MQ
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FS
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65842
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele num: 16094
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African
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allele frequency: 0.0e0
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Latino
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Other
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European (Finnish)
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ClippingRankSum
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VQSLOD
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MQRankSum
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QD
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InbreedingCoeff
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DP
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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East Asian
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African
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Other
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Latino
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MQ
type: SiteQuality
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DP
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VQSLOD
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InbreedingCoeff
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MQRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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allele num: 8192
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 7.188398549818727e-4
allele num: 63992
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European (Finnish)
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allele frequency: 1.564455569461827e-4
allele num: 6392
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South Asian
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Latino
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Other
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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FS
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MQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 402
bin: 4.25e1
variant carriers: 13

GenotypeQuality
all individuals: 1623
bin: 3.75e1
variant carriers: 7

GenotypeQuality
all individuals: 49
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 996
bin: 7.25e1
variant carriers: 12

GenotypeQuality
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bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 524
bin: 8.25e1
variant carriers: 15

GenotypeQuality
all individuals: 196
bin: 7.5e0
variant carriers: 2

GenotypeQuality
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bin: 5.25e1
variant carriers: 14

GenotypeQuality
all individuals: 1015
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 124
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 250
bin: 9.25e1
variant carriers: 14

GenotypeQuality
all individuals: 4536
bin: 6.75e1
variant carriers: 9

GenotypeQuality
all individuals: 241
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 94
bin: 1.25e1
variant carriers: 4

GenotypeQuality
all individuals: 25326
bin: 6.25e1
variant carriers: 15

GenotypeQuality
all individuals: 3050
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 836
bin: 7.75e1
variant carriers: 18

GenotypeQuality
all individuals: 11617
bin: 2.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 106
allele frequency: 1.69926258416159e-2
allele num: 6238
num of homozygotes: 0

African
type: Population
allele count: 407
allele frequency: 4.241350562734473e-2
allele num: 9596
num of homozygotes: 10

European (Non-Finnish)
type: Population
allele count: 3038
allele frequency: 4.88440142769864e-2
allele num: 62198
num of homozygotes: 84

Latino
type: Population
allele count: 317
allele frequency: 3.012735221440791e-2
allele num: 10522
num of homozygotes: 7

Other
type: Population
allele count: 44
allele frequency: 5.250596658711217e-2
allele num: 838
num of homozygotes: 2

East Asian
type: Population
allele count: 8
allele frequency: 1.002255073916312e-3
allele num: 7982
num of homozygotes: 0

South Asian
type: Population
allele count: 394
allele frequency: 2.557777200727084e-2
allele num: 15404
num of homozygotes: 12

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.38e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.621e0

VQSLOD
type: SiteQuality
SIO_000300: 5.99e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e-1

QD
type: SiteQuality
SIO_000300: 1.347e1

DP
type: SiteQuality
SIO_000300: 1.359552e6

GenotypeQuality
all individuals: 997
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4710
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 24395
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13683
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2260
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6208
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.550504388837941e-5
allele num: 15266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61470
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.266e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.039999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.027e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 1.276577e6

GenotypeQuality
all individuals: 252
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 837
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 549
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GenotypeQuality
all individuals: 127
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GenotypeQuality
all individuals: 25424
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GenotypeQuality
all individuals: 973
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variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.627763127909626e-5
allele num: 61434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6198
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.81e0

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.269e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

DP
type: SiteQuality
SIO_000300: 1.275243e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.92e-1

GenotypeQuality
all individuals: 15692
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1818
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5756
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variant carriers: 0

GenotypeQuality
all individuals: 1102
bin: 7.5e0
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GenotypeQuality
all individuals: 8695
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
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variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11619
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 2.5e0
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GenotypeQuality
all individuals: 366
bin: 5.75e1
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GenotypeQuality
all individuals: 246
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variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5580
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
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variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7470
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.021659174499387e-4
allele num: 9788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6046
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14776
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.085259e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

QD
type: SiteQuality
SIO_000300: 1.327e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

FS
type: SiteQuality
SIO_000300: 2.078e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.581e0

MQRankSum
type: SiteQuality
SIO_000300: -3.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.632e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

GenotypeQuality
all individuals: 8695
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 626
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
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variant carriers: 0

GenotypeQuality
all individuals: 1520
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GenotypeQuality
all individuals: 680
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variant carriers: 0

GenotypeQuality
all individuals: 1102
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GenotypeQuality
all individuals: 571
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variant carriers: 0

GenotypeQuality
all individuals: 15692
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variant carriers: 0

GenotypeQuality
all individuals: 5756
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5580
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
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GenotypeQuality
all individuals: 257
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GenotypeQuality
all individuals: 761
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variant carriers: 0

GenotypeQuality
all individuals: 11619
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1818
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6046
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9078
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.021659174499387e-4
allele num: 9788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.702533369654045e-5
allele num: 58736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7470
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.085259e6

QD
type: SiteQuality
SIO_000300: 1.327e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.32e-1

FS
type: SiteQuality
SIO_000300: 2.078e0

VQSLOD
type: SiteQuality
SIO_000300: -5.632e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.581e0

GenotypeQuality
all individuals: 15660
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
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GenotypeQuality
all individuals: 736
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GenotypeQuality
all individuals: 727
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1187
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GenotypeQuality
all individuals: 257
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GenotypeQuality
all individuals: 248
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GenotypeQuality
all individuals: 1951
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GenotypeQuality
all individuals: 2576
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1671
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6004
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8998
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.06058108386565e-4
allele num: 9706
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.139274334463974e-5
allele num: 58374
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-1

QD
type: SiteQuality
SIO_000300: 1.305e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

FS
type: SiteQuality
SIO_000300: 1.905e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.072094e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.32e-1

GenotypeQuality
all individuals: 6094
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1415
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GenotypeQuality
all individuals: 1992
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variant carriers: 0

GenotypeQuality
all individuals: 5999
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GenotypeQuality
all individuals: 221
bin: 5.75e1
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GenotypeQuality
all individuals: 244
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GenotypeQuality
all individuals: 2852
bin: 4.25e1
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GenotypeQuality
all individuals: 1326
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1256
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GenotypeQuality
all individuals: 1768
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5866
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14296
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.102049812651532e-4
allele num: 9074
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.798755261359139e-5
allele num: 55594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7118
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

QD
type: SiteQuality
SIO_000300: 9.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.97e0

VQSLOD
type: SiteQuality
SIO_000300: 3.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

DP
type: SiteQuality
SIO_000300: 1.009878e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.793e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 505
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GenotypeQuality
all individuals: 255
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54640
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.122838535818549e-4
allele num: 8906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5772
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8494
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Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
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ClippingRankSum
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SIO_000300: 6.43e-1

ReadPosRankSum
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MQRankSum
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DP
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -8.59e-1

BaseQRankSum
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SIO_000300: -2.534e0

QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 8906
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East Asian
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allele count: 4
allele frequency: 5.709391949757351e-4
allele num: 7006
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.830161054172767e-5
allele num: 54640
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5772
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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FS
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InbreedingCoeff
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DP
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MQRankSum
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QD
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MQ
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: -7.04e-1

ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14048
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.742160278745645e-4
allele num: 5740
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 9.25000925000925e-5
allele num: 54054
num of homozygotes: 0

East Asian
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InbreedingCoeff
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MQ
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MQRankSum
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DP
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ReadPosRankSum
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QD
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FS
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BaseQRankSum
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ClippingRankSum
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SIO_000300: 2.96e-1

VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5742
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6920
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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FS
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MQRankSum
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MQ
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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ClippingRankSum
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DP
type: SiteQuality
SIO_000300: 9.95834e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 6
allele frequency: 7.158196134574087e-4
allele num: 8382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53554
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6920
num of homozygotes: 0

Latino
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allele frequency: 4.618937644341801e-4
allele num: 8660
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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MQ
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FS
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QD
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ReadPosRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12666
num of homozygotes: 0

European (Non-Finnish)
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allele count: 26
allele frequency: 3.986996258357357e-4
allele num: 65212
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 1
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allele num: 848
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FS
type: SiteQuality
SIO_000300: 8.34e-1

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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MQ
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DP
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BaseQRankSum
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QD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65270
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Latino
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allele num: 11502
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East Asian
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South Asian
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allele frequency: 2.352941176470588e-4
allele num: 12750
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BaseQRankSum
type: SiteQuality
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DP
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QD
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ReadPosRankSum
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VQSLOD
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FS
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ClippingRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 65372
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Other
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FS
type: SiteQuality
SIO_000300: 2.125e0

MQRankSum
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QD
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MQ
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ReadPosRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2286
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 36187
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 114
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8390
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1145
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4013
bin: 9.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.869220352099052e-4
allele num: 10338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13340
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 2.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.43e-1

QD
type: SiteQuality
SIO_000300: 1.307e1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.738378e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.91e-1

GenotypeQuality
all individuals: 118
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 4797
bin: 9.75e1
variant carriers: 1355

GenotypeQuality
all individuals: 2363
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 439
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 154
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 148
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 733
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
all individuals: 444
bin: 9.25e1
variant carriers: 6

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 2.75e1
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GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1080
bin: 8.25e1
variant carriers: 8

GenotypeQuality
all individuals: 90
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2482
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 36112
bin: 6.25e1
variant carriers: 2

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.488372093023256e-3
allele num: 860
num of homozygotes: 0

African
type: Population
allele count: 1103
allele frequency: 1.065906455353691e-1
allele num: 10348
num of homozygotes: 70

European (Non-Finnish)
type: Population
allele count: 210
allele frequency: 3.205911089399121e-3
allele num: 65504
num of homozygotes: 0

Latino
type: Population
allele count: 117
allele frequency: 1.015272474835127e-2
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 23
allele frequency: 1.715649709085484e-3
allele num: 13406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.580000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 2.155e0

QD
type: SiteQuality
SIO_000300: 1.32e1

DP
type: SiteQuality
SIO_000300: 1.763289e6

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 3
bin: 2.5e0
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GenotypeQuality
all individuals: 1100
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 42
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GenotypeQuality
all individuals: 234
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variant carriers: 0

GenotypeQuality
all individuals: 34
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GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 9.75e1
variant carriers: 65

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40502
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8853
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2442
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 13
allele frequency: 1.123401313515382e-3
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 4.205340782794149e-4
allele num: 66582
num of homozygotes: 0

South Asian
type: Population
allele count: 24
allele frequency: 1.474563774883264e-3
allele num: 16276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 1.796329e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.574e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

QD
type: SiteQuality
SIO_000300: 1.352e1

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1100
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2604
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8853
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2442
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40502
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 9.75e1
variant carriers: 59

African
type: Population
allele count: 32
allele frequency: 3.075740099961553e-3
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.456619426201175e-4
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16276
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.2271714922049e-3
allele num: 898
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 3.304196329338259e-4
allele num: 66582
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.352e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.574e0

DP
type: SiteQuality
SIO_000300: 1.796329e6

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

GenotypeQuality
all individuals: 2613
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 57
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variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8868
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1103
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2449
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40609
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3627
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.135722174499939e-5
allele num: 16298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

DP
type: SiteQuality
SIO_000300: 1.792578e6

FS
type: SiteQuality
SIO_000300: 1.149e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.462e0

QD
type: SiteQuality
SIO_000300: 1.086e1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40654
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 438
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variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2609
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 8.75e1
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GenotypeQuality
all individuals: 1106
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2445
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3625
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501321162623108e-5
allele num: 66608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.972e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e-2

MQ
type: SiteQuality
SIO_000300: 5.934e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.794535e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.88e-1

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.854e0

FS
type: SiteQuality
SIO_000300: 1.526e0

MQRankSum
type: SiteQuality
SIO_000300: -9.96e-1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8882
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
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GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 2614
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GenotypeQuality
all individuals: 2462
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variant carriers: 0

GenotypeQuality
all individuals: 1095
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variant carriers: 0

GenotypeQuality
all individuals: 102
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GenotypeQuality
all individuals: 439
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GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3621
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500510173458976e-5
allele num: 66644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

DP
type: SiteQuality
SIO_000300: 1.796154e6

MQRankSum
type: SiteQuality
SIO_000300: 9.429999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.813e1

QD
type: SiteQuality
SIO_000300: 5.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.74e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.562e0

FS
type: SiteQuality
SIO_000300: 1.058e0

GenotypeQuality
all individuals: 433
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3618
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1089
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8868
bin: 6.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 70
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GenotypeQuality
all individuals: 46
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GenotypeQuality
all individuals: 40844
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variant carriers: 0

GenotypeQuality
all individuals: 437
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GenotypeQuality
all individuals: 2438
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818402230573403e-4
allele num: 16498
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.7975e6

QD
type: SiteQuality
SIO_000300: 1.206e1

FS
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-1

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2596
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8806
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1080
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2423
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40837
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3616
bin: 9.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.497211728728189e-5
allele num: 66708
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

QD
type: SiteQuality
SIO_000300: 1.259e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.797617e6

GenotypeQuality
all individuals: 93
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3611
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40822
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8789
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2595
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.66e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

DP
type: SiteQuality
SIO_000300: 1.79718e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.943e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.65e-1

QD
type: SiteQuality
SIO_000300: 1.314e1