7-143417869-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417869
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417869
    reference: chr 7
allele count: 3
allele frequency: 9.573653306101608e-5
allele num: 31336
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1124-30T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+102T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73130A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73130A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+83993T>C
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+102T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73130A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+102T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+102T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+102T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+102T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1124-30T>C
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10958
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11768
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9820
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

7-143417874-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417874
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417874
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 27146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+107C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1124-25C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+107C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1124-25C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+83998C>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+107C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73135G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73135G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73135G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+107C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+107C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+107C>T
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11861
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8719
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12517
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/7-143417875-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417875
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417875
    reference: chr 7
allele count: 1
allele frequency: 3.804885472947264e-5
allele num: 26282
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+108C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+83999C>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73136G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1124-24C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1124-24C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+108C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73136G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73136G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+108C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+108C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+108C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+108C>A
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11829
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8518
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12842
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/7-143417876-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417876
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417876
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 25138
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1124-23C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+109C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73137G>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+109C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1124-23C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73137G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73137G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+109C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+109C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+109C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84000C>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+109C>A
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11816
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

7-143417880-C-CTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417880
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417882
    reference: chr 7
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
alternate allele: CTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1124-9_1124-8dupTT
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73143_707-73142dupAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+123_772+124dupTT
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84014_132+84015dupTT
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+123_1615+124dupTT
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+123_1058+124dupTT
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1124-9_1124-8dupTT
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+123_772+124dupTT
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73143_67-73142dupAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+123_1615+124dupTT
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73143_693-73142dupAA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+123_1615+124dupTT
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12223
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

7-143417880-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417880
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417879
    reference: chr 7
allele count: 339
allele frequency: 2.940666204024983e-2
allele num: 11528
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+124delT
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73142delA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+124delT
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84015delT
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1124-8delT
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+124delT
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+124delT
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+124delT
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73142delA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73142delA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+124delT
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1124-8delT
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14413
  bin: 2.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12223
  bin: 7.5e0
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 1.75e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 2.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 1.25e1
  variant carriers: 201
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: CT
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

7-143417884-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417884
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417884
    reference: chr 7
allele count: 82
allele frequency: 5.758426966292134e-3
allele num: 14240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+117T>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+117T>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73145A>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+117T>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+117T>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+117T>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73145A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+117T>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73145A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1124-15T>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1124-15T>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84008T>A
  variant of: http://identifiers.org/hgnc/33603
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12289
  bin: 7.5e0
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 5417
  bin: 1.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20456
  bin: 2.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
num of homozygotes: 17
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

7-143417889-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417889
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417889
    reference: chr 7
allele count: 1
allele frequency: 8.552856654122477e-5
allele num: 11692
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+122T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+122T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+122T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84013T>C
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73150A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1124-10T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1124-10T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+122T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73150A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+122T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+122T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73150A>G
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12018
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4438
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23787
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

7-143417896-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417896
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417894
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 8344
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1124_1125delAG
  hgvsp: ENSP00000389100.1:p.Glu375ValfsTer59
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73159_693-73158delCT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+132_1615+133delAG
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+132_1058+133delAG
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84023_132+84024delAG
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+132_1615+133delAG
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+132_772+133delAG
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1124_1125delAG
  hgvsp: ENSP00000386405.3:p.Glu375ValfsTer59
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+132_772+133delAG
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73159_67-73158delCT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73159_707-73158delCT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+132_1615+133delAG
  variant of: http://identifiers.org/hgnc/26878
canonical: false
consequence: splice acceptor
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11282
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28327
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1124_1125delAG
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: CAG
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

7-143417906-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417906
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417906
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 6428
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73167G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+139C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+139C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73167G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+139C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1131C>T
  hgvsp: ENST00000411935.1:c.1131C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+139C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+139C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1131C>T
  hgvsp: ENST00000409703.3:c.1131C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+139C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84030C>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73167G>A
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10543
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His377His
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

7-143417916-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417916
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417916
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 5530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+149C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+149C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73177G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+149C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84040C>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1141C>T
  hgvsp: ENSP00000386405.3:p.Gln381Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73177G>A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1141C>T
  hgvsp: ENSP00000389100.1:p.Gln381Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73177G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+149C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+149C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+149C>T
  variant of: http://identifiers.org/hgnc/26878
canonical: false
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9411
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32011
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln381Ter
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

7-143417917-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417917
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417916
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 5480
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73179delC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1144delG
  hgvsp: ENSP00000389100.1:p.Val382LeufsTer18
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+152delG
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+152delG
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+152delG
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+152delG
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73179delC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1144delG
  hgvsp: ENSP00000386405.3:p.Val382LeufsTer18
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+152delG
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84043delG
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+152delG
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73179delC
canonical: false
consequence: frameshift
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32122
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val382LeufsTer18
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: AG
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

7-143417934-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417934
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417934
    reference: chr 7
allele count: 6
allele frequency: 1.612903225806452e-3
allele num: 3720
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+167C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84058C>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+167C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73195G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73195G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73195G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+167C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+167C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1159C>T
  hgvsp: ENSP00000389100.1:p.Arg387Cys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1159C>T
  hgvsp: ENSP00000386405.3:p.Arg387Cys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+167C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+167C>T
  variant of: http://identifiers.org/hgnc/26878
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6084
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31298
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg387Cys
num of homozygotes: 1
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS

7-143417935-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417935
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417935
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 3608
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73196C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73196C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+168G>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+168G>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+168G>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+168G>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1160G>A
  hgvsp: ENSP00000389100.1:p.Arg387His
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1160G>A
  hgvsp: ENSP00000386405.3:p.Arg387His
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73196C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+168G>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84059G>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+168G>A
  variant of: http://identifiers.org/hgnc/26878
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5870
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Arg387His
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

7-143417936-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417936
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417936
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 3622
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1161C>T
  hgvsp: ENST00000409703.3:c.1161C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+169C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+169C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1161C>T
  hgvsp: ENST00000411935.1:c.1161C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73197G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+169C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+169C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+169C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+169C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73197G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84060C>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73197G>A
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 31155
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg387Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/7-143417955-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417955
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417955
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 2828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73216G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1180C>A
  hgvsp: ENSP00000386405.3:p.Leu394Ile
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+188C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+188C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1180C>A
  hgvsp: ENSP00000389100.1:p.Leu394Ile
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+188C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+188C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73216G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+188C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73216G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+188C>A
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84079C>A
  variant of: http://identifiers.org/hgnc/33603
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3704
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22686
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu394Ile
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

7-143417957-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417957
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417957
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 2792
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73218G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+190C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1182C>T
  hgvsp: ENST00000409703.3:c.1182C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+190C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1182C>T
  hgvsp: ENST00000411935.1:c.1182C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+190C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73218G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+190C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+190C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84081C>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73218G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+190C>T
  variant of: http://identifiers.org/hgnc/26878
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3573
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21855
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu394Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: QD

7-143417981-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417981
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417981
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 2088
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+214T>G
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+214T>G
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73242A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73242A>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1206T>G
  hgvsp: ENST00000411935.1:c.1206T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1206T>G
  hgvsp: ENST00000409703.3:c.1206T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84105T>G
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+214T>G
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73242A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+214T>G
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+214T>G
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+214T>G
  variant of: http://identifiers.org/hgnc/26878
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10572
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser402Ser
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

7-143417982-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143417982
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143417982
    reference: chr 7
allele count: 2
allele frequency: 9.852216748768472e-4
allele num: 2030
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84106T>C
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1058+215T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73243A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73243A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1207T>C
  hgvsp: ENSP00000389100.1:p.Ser403Pro
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1615+215T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1207T>C
  hgvsp: ENSP00000386405.3:p.Ser403Pro
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.772+215T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73243A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.772+215T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1615+215T>C
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1615+215T>C
  variant of: http://identifiers.org/hgnc/26878
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10339
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser403Pro
num of homozygotes: 1
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

7-143418120-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143418120
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143418120
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 1172
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84244G>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.773-254G>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1616-254G>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.773-254G>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73381C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1059-254G>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73381C>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1616-254G>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1303+42G>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1303+42G>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73381C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1616-254G>T
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

7-143418124-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143418124
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143418124
    reference: chr 7
allele count: 1
allele frequency: 8.051529790660225e-4
allele num: 1242
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.1616-250C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.132+84248C>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-73385G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.1616-250C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-73385G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.773-250C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.1616-250C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1059-250C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1303+46C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1303+46C>T
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-73385G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.773-250C>T
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6471
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

7-143421498-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421498
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421498
    reference: chr 7
allele count: 1
allele frequency: 2.030869212022746e-4
allele num: 4924
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1901T>G
  hgvsp: ENSP00000386405.3:p.Val634Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76759A>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1370T>G
  hgvsp: ENSP00000390603.2:p.Val457Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1656T>G
  hgvsp: ENSP00000431079.1:p.Val553Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76759A>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1370T>G
  hgvsp: ENSP00000441099.1:p.Val457Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2213T>G
  hgvsp: ENSP00000349902.4:p.Val738Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2213T>G
  hgvsp: ENSP00000412724.2:p.Val738Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2213T>G
  hgvsp: ENSP00000404265.2:p.Val738Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85585T>G
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76759A>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1901T>G
  hgvsp: ENSP00000389100.1:p.Val634Gly
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val738Gly
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

7-143421502-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421502
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421502
    reference: chr 7
allele count: 1
allele frequency: 1.850481125092524e-4
allele num: 5404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1374G>A
  hgvsp: ENST00000411497.2:c.1374G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1905G>A
  hgvsp: ENST00000411935.1:c.1905G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2217G>A
  hgvsp: ENST00000441159.2:c.2217G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1660G>A
  hgvsp: ENST00000518791.1:c.1660G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2217G>A
  hgvsp: ENST00000444908.2:c.2217G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2217G>A
  hgvsp: ENST00000357344.4:c.2217G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1374G>A
  hgvsp: ENST00000425618.2:c.1374G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76763C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76763C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76763C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85581G>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1905G>A
  hgvsp: ENST00000409703.3:c.1905G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys739Lys
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

7-143421503-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421503
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421503
    reference: chr 7
allele count: 1
allele frequency: 1.790189760114572e-4
allele num: 5586
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76764C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85580G>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1375G>A
  hgvsp: ENSP00000441099.1:p.Glu459Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1906G>A
  hgvsp: ENSP00000389100.1:p.Glu636Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76764C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2218G>A
  hgvsp: ENSP00000404265.2:p.Glu740Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1375G>A
  hgvsp: ENSP00000390603.2:p.Glu459Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2218G>A
  hgvsp: ENSP00000349902.4:p.Glu740Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2218G>A
  hgvsp: ENSP00000412724.2:p.Glu740Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1661G>A
  hgvsp: ENSP00000431079.1:p.Glu555Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1906G>A
  hgvsp: ENSP00000386405.3:p.Glu636Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76764C>T
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26727
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4423
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu740Lys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

7-143421513-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421513
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421513
    reference: chr 7
allele count: 2
allele frequency: 1.07828337287039e-4
allele num: 18548
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1671A>G
  hgvsp: ENSP00000431079.1:p.Asn558Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85570A>G
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2228A>G
  hgvsp: ENSP00000404265.2:p.Asn743Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1385A>G
  hgvsp: ENSP00000390603.2:p.Asn462Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2228A>G
  hgvsp: ENSP00000349902.4:p.Asn743Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1916A>G
  hgvsp: ENSP00000389100.1:p.Asn639Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1385A>G
  hgvsp: ENSP00000441099.1:p.Asn462Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76774T>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2228A>G
  hgvsp: ENSP00000412724.2:p.Asn743Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76774T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1916A>G
  hgvsp: ENSP00000386405.3:p.Asn639Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76774T>C
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7144
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn743Ser
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

7-143421525-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421525
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421525
    reference: chr 7
allele count: 6
allele frequency: 8.876002248587236e-5
allele num: 67598
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1928T>A
  hgvsp: ENSP00000386405.3:p.Met643Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76786A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76786A>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2240T>A
  hgvsp: ENSP00000349902.4:p.Met747Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2240T>A
  hgvsp: ENSP00000404265.2:p.Met747Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1928T>A
  hgvsp: ENSP00000389100.1:p.Met643Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76786A>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2240T>A
  hgvsp: ENSP00000412724.2:p.Met747Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1397T>A
  hgvsp: ENSP00000441099.1:p.Met466Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85558T>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1683T>A
  hgvsp: ENSP00000431079.1:p.Met562Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1397T>A
  hgvsp: ENSP00000390603.2:p.Met466Lys
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 30187
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met747Lys
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

7-143421527-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421527
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421526
    reference: chr 7
allele count: 1
allele frequency: 1.320236586396282e-5
allele num: 75744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1932delG
  hgvsp: ENSP00000389100.1:p.Ser645AlafsTer54
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76789delC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2244delG
  hgvsp: ENSP00000349902.4:p.Ser749AlafsTer54
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1401delG
  hgvsp: ENSP00000441099.1:p.Ser468AlafsTer54
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2244delG
  hgvsp: ENSP00000412724.2:p.Ser749AlafsTer54
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1932delG
  hgvsp: ENSP00000386405.3:p.Ser645AlafsTer54
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1687delG
  hgvsp: ENSP00000431079.1:p.Ser564AlafsTer54
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76789delC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1401delG
  hgvsp: ENSP00000390603.2:p.Ser468AlafsTer54
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76789delC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2244delG
  hgvsp: ENSP00000404265.2:p.Ser749AlafsTer54
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85554delG
  variant of: http://identifiers.org/hgnc/33603
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser749AlafsTer54
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
reference allele: AG
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

7-143421528-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421528
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421528
    reference: chr 7
allele count: 1
allele frequency: 1.263583522870862e-5
allele num: 79140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76789C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1400G>A
  hgvsp: ENSP00000390603.2:p.Arg467Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2243G>A
  hgvsp: ENSP00000412724.2:p.Arg748Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76789C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76789C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1400G>A
  hgvsp: ENSP00000441099.1:p.Arg467Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1931G>A
  hgvsp: ENSP00000389100.1:p.Arg644Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85555G>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2243G>A
  hgvsp: ENSP00000349902.4:p.Arg748Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1931G>A
  hgvsp: ENSP00000386405.3:p.Arg644Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2243G>A
  hgvsp: ENSP00000404265.2:p.Arg748Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1686G>A
  hgvsp: ENSP00000431079.1:p.Arg563Lys
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19011
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg748Lys
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

7-143421531-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421531
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421531
    reference: chr 7
allele count: 2
allele frequency: 2.288486623795684e-5
allele num: 87394
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85552G>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1934G>T
  hgvsp: ENSP00000386405.3:p.Ser645Ile
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76792C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76792C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1689G>T
  hgvsp: ENSP00000431079.1:p.Ser564Ile
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1934G>T
  hgvsp: ENSP00000389100.1:p.Ser645Ile
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2246G>T
  hgvsp: ENSP00000412724.2:p.Ser749Ile
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2246G>T
  hgvsp: ENSP00000349902.4:p.Ser749Ile
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2246G>T
  hgvsp: ENSP00000404265.2:p.Ser749Ile
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1403G>T
  hgvsp: ENSP00000441099.1:p.Ser468Ile
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76792C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1403G>T
  hgvsp: ENSP00000390603.2:p.Ser468Ile
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39308
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser749Ile
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS

7-143421534-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421534
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421534
    reference: chr 7
allele count: 386
allele frequency: 4.027461864318357e-3
allele num: 95842
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1937G>C
  hgvsp: ENSP00000386405.3:p.Arg646Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76795C>G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2249G>C
  hgvsp: ENSP00000412724.2:p.Arg750Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1406G>C
  hgvsp: ENSP00000441099.1:p.Arg469Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1692G>C
  hgvsp: ENSP00000431079.1:p.Arg565Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2249G>C
  hgvsp: ENSP00000349902.4:p.Arg750Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1937G>C
  hgvsp: ENSP00000389100.1:p.Arg646Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2249G>C
  hgvsp: ENSP00000404265.2:p.Arg750Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1406G>C
  hgvsp: ENSP00000390603.2:p.Arg469Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85549G>C
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76795C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76795C>G
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 3.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 4.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 3.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 11830
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42753
  bin: 2.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 2.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
hgvs: p.Arg750Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

7-143421537-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421537
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421537
    reference: chr 7
allele count: 1
allele frequency: 9.873617693522906e-6
allele num: 101280
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1409G>T
  hgvsp: ENSP00000441099.1:p.Gly470Val
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1409G>T
  hgvsp: ENSP00000390603.2:p.Gly470Val
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76798C>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2252G>T
  hgvsp: ENSP00000412724.2:p.Gly751Val
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2252G>T
  hgvsp: ENSP00000404265.2:p.Gly751Val
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2252G>T
  hgvsp: ENSP00000349902.4:p.Gly751Val
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1940G>T
  hgvsp: ENSP00000386405.3:p.Gly647Val
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1695G>T
  hgvsp: ENSP00000431079.1:p.Gly566Val
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76798C>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85546G>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1940G>T
  hgvsp: ENSP00000389100.1:p.Gly647Val
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76798C>A
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly751Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

7-143421541-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421541
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421541
    reference: chr 7
allele count: 1
allele frequency: 9.378927425859578e-6
allele num: 106622
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76802C>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2256G>T
  hgvsp: ENST00000444908.2:c.2256G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76802C>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1413G>T
  hgvsp: ENST00000425618.2:c.1413G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1944G>T
  hgvsp: ENST00000411935.1:c.1944G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1413G>T
  hgvsp: ENST00000411497.2:c.1413G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1944G>T
  hgvsp: ENST00000409703.3:c.1944G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1699G>T
  hgvsp: ENST00000518791.1:c.1699G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2256G>T
  hgvsp: ENST00000441159.2:c.2256G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2256G>T
  hgvsp: ENST00000357344.4:c.2256G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85542G>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76802C>A
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val752Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

7-143421543-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421543
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421543
    reference: chr 7
allele count: 1
allele frequency: 9.139932364500503e-6
allele num: 109410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76804C>T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1415G>A
  hgvsp: ENSP00000390603.2:p.Trp472Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76804C>T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1701G>A
  hgvsp: ENSP00000431079.1:p.Trp568Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1415G>A
  hgvsp: ENSP00000441099.1:p.Trp472Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1946G>A
  hgvsp: ENSP00000386405.3:p.Trp649Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2258G>A
  hgvsp: ENSP00000404265.2:p.Trp753Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2258G>A
  hgvsp: ENSP00000412724.2:p.Trp753Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76804C>T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2258G>A
  hgvsp: ENSP00000349902.4:p.Trp753Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1946G>A
  hgvsp: ENSP00000389100.1:p.Trp649Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85540G>A
  variant of: http://identifiers.org/hgnc/33603
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47910
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5798
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp753Ter
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

7-143421548-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421548
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421548
    reference: chr 7
allele count: 27
allele frequency: 2.365350247047692e-4
allele num: 114148
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85535C>G
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76809G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1951C>G
  hgvsp: ENSP00000389100.1:p.Pro651Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76809G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1420C>G
  hgvsp: ENSP00000441099.1:p.Pro474Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1706C>G
  hgvsp: ENSP00000431079.1:p.Pro570Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76809G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2263C>G
  hgvsp: ENSP00000349902.4:p.Pro755Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1951C>G
  hgvsp: ENSP00000386405.3:p.Pro651Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2263C>G
  hgvsp: ENSP00000412724.2:p.Pro755Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1420C>G
  hgvsp: ENSP00000390603.2:p.Pro474Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2263C>G
  hgvsp: ENSP00000404265.2:p.Pro755Ala
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
hgvs: p.Pro755Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/7-143421555-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421555
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421555
    reference: chr 7
allele count: 8
allele frequency: 6.811061163329247e-5
allele num: 117456
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2270A>C
  hgvsp: ENSP00000412724.2:p.His757Pro
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1427A>C
  hgvsp: ENSP00000441099.1:p.His476Pro
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1713A>C
  hgvsp: ENSP00000431079.1:p.His572Pro
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2270A>C
  hgvsp: ENSP00000349902.4:p.His757Pro
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1958A>C
  hgvsp: ENSP00000389100.1:p.His653Pro
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2270A>C
  hgvsp: ENSP00000404265.2:p.His757Pro
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76816T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76816T>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1958A>C
  hgvsp: ENSP00000386405.3:p.His653Pro
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85528A>C
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1427A>C
  hgvsp: ENSP00000390603.2:p.His476Pro
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76816T>G
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50606
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.His757Pro
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD

7-143421557-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421557
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421557
    reference: chr 7
allele count: 7
allele frequency: 5.934315603859001e-5
allele num: 117958
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1960G>A
  hgvsp: ENSP00000389100.1:p.Glu654Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1715G>A
  hgvsp: ENSP00000431079.1:p.Glu573Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76818C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76818C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1960G>A
  hgvsp: ENSP00000386405.3:p.Glu654Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2272G>A
  hgvsp: ENSP00000349902.4:p.Glu758Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76818C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85526G>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2272G>A
  hgvsp: ENSP00000404265.2:p.Glu758Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2272G>A
  hgvsp: ENSP00000412724.2:p.Glu758Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1429G>A
  hgvsp: ENSP00000441099.1:p.Glu477Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1429G>A
  hgvsp: ENSP00000390603.2:p.Glu477Lys
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu758Lys
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

7-143421564-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421564
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421564
    reference: chr 7
allele count: 1
allele frequency: 8.380965151946898e-6
allele num: 119318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1967G>C
  hgvsp: ENSP00000386405.3:p.Gly656Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76825C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2279G>C
  hgvsp: ENSP00000349902.4:p.Gly760Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1722G>C
  hgvsp: ENSP00000431079.1:p.Gly575Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2279G>C
  hgvsp: ENSP00000404265.2:p.Gly760Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76825C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76825C>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85519G>C
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1967G>C
  hgvsp: ENSP00000389100.1:p.Gly656Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2279G>C
  hgvsp: ENSP00000412724.2:p.Gly760Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1436G>C
  hgvsp: ENSP00000390603.2:p.Gly479Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1436G>C
  hgvsp: ENSP00000441099.1:p.Gly479Ala
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly760Ala
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

7-143421565-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421565
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421565
    reference: chr 7
allele count: 51
allele frequency: 4.26892557002712e-4
allele num: 119468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2280C>T
  hgvsp: ENST00000441159.2:c.2280C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2280C>T
  hgvsp: ENST00000444908.2:c.2280C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76826G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76826G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2280C>T
  hgvsp: ENST00000357344.4:c.2280C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76826G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1437C>T
  hgvsp: ENST00000425618.2:c.1437C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1437C>T
  hgvsp: ENST00000411497.2:c.1437C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1968C>T
  hgvsp: ENST00000409703.3:c.1968C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85518C>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1723C>T
  hgvsp: ENST00000518791.1:c.1723C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1968C>T
  hgvsp: ENST00000411935.1:c.1968C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 51103
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly760Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-143421566-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421566
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421566
    reference: chr 7
allele count: 39
allele frequency: 3.260924095720664e-4
allele num: 119598
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1724C>A
  hgvsp: ENSP00000431079.1:p.His576Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1438C>A
  hgvsp: ENSP00000390603.2:p.His480Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2281C>A
  hgvsp: ENSP00000349902.4:p.His761Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1969C>A
  hgvsp: ENSP00000386405.3:p.His657Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85517C>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2281C>A
  hgvsp: ENSP00000412724.2:p.His761Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76827G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76827G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76827G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1438C>A
  hgvsp: ENSP00000441099.1:p.His480Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2281C>A
  hgvsp: ENSP00000404265.2:p.His761Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1969C>A
  hgvsp: ENSP00000389100.1:p.His657Asn
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 6681
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51108
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.His761Asn
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/7-143421572-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421572
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421572
    reference: chr 7
allele count: 7
allele frequency: 5.847367014167335e-5
allele num: 119712
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76833G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1975C>A
  hgvsp: ENSP00000386405.3:p.Gln659Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76833G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1975C>A
  hgvsp: ENSP00000389100.1:p.Gln659Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2287C>A
  hgvsp: ENSP00000349902.4:p.Gln763Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85511C>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1444C>A
  hgvsp: ENSP00000390603.2:p.Gln482Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1730C>A
  hgvsp: ENSP00000431079.1:p.Gln578Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1444C>A
  hgvsp: ENSP00000441099.1:p.Gln482Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2287C>A
  hgvsp: ENSP00000412724.2:p.Gln763Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2287C>A
  hgvsp: ENSP00000404265.2:p.Gln763Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76833G>T
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6910
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln763Lys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD

7-143421575-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421575
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421575
    reference: chr 7
allele count: 1
allele frequency: 8.356732183446986e-6
allele num: 119664
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1978C>T
  hgvsp: ENSP00000389100.1:p.Gln660Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2290C>T
  hgvsp: ENSP00000404265.2:p.Gln764Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1447C>T
  hgvsp: ENSP00000441099.1:p.Gln483Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76836G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76836G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76836G>A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1733C>T
  hgvsp: ENSP00000431079.1:p.Gln579Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2290C>T
  hgvsp: ENSP00000349902.4:p.Gln764Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1978C>T
  hgvsp: ENSP00000386405.3:p.Gln660Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85508C>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2290C>T
  hgvsp: ENSP00000412724.2:p.Gln764Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1447C>T
  hgvsp: ENSP00000390603.2:p.Gln483Ter
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50485
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln764Ter
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

7-143421579-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421579
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421579
    reference: chr 7
allele count: 3
allele frequency: 2.513531176165022e-5
allele num: 119354
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85504G>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76840C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1982G>A
  hgvsp: ENSP00000389100.1:p.Arg661Gln
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2294G>A
  hgvsp: ENSP00000404265.2:p.Arg765Gln
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1451G>A
  hgvsp: ENSP00000390603.2:p.Arg484Gln
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2294G>A
  hgvsp: ENSP00000412724.2:p.Arg765Gln
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76840C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1982G>A
  hgvsp: ENSP00000386405.3:p.Arg661Gln
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1451G>A
  hgvsp: ENSP00000441099.1:p.Arg484Gln
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2294G>A
  hgvsp: ENSP00000349902.4:p.Arg765Gln
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1737G>A
  hgvsp: ENSP00000431079.1:p.Arg580Gln
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76840C>T
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg765Gln
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

7-143421580-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421580
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421580
    reference: chr 7
allele count: 1
allele frequency: 8.378577652657685e-6
allele num: 119352
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2295G>A
  hgvsp: ENST00000444908.2:c.2295G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76841C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76841C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1983G>A
  hgvsp: ENST00000409703.3:c.1983G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2295G>A
  hgvsp: ENST00000357344.4:c.2295G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85503G>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1452G>A
  hgvsp: ENST00000411497.2:c.1452G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1452G>A
  hgvsp: ENST00000425618.2:c.1452G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76841C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2295G>A
  hgvsp: ENST00000441159.2:c.2295G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1738G>A
  hgvsp: ENST00000518791.1:c.1738G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1983G>A
  hgvsp: ENST00000411935.1:c.1983G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg765Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum

7-143421585-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421585
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421584
    reference: chr 7
allele count: 1
allele frequency: 8.393063971933595e-6
allele num: 119146
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1989delA
  hgvsp: ENSP00000386405.3:p.Trp664GlyfsTer35
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1458delA
  hgvsp: ENSP00000390603.2:p.Trp487GlyfsTer35
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2301delA
  hgvsp: ENSP00000349902.4:p.Trp768GlyfsTer35
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2301delA
  hgvsp: ENSP00000404265.2:p.Trp768GlyfsTer35
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1989delA
  hgvsp: ENSP00000389100.1:p.Trp664GlyfsTer35
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1744delA
  hgvsp: ENSP00000431079.1:p.Trp583GlyfsTer35
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76847delT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1458delA
  hgvsp: ENSP00000441099.1:p.Trp487GlyfsTer35
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76847delT
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2301delA
  hgvsp: ENSP00000412724.2:p.Trp768GlyfsTer35
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85497delA
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76847delT
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp768GlyfsTer35
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: GA
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

7-143421593-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421593
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421593
    reference: chr 7
allele count: 3
allele frequency: 2.524572505722364e-5
allele num: 118832
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2308T>C
  hgvsp: ENSP00000404265.2:p.Phe770Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76854A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2308T>C
  hgvsp: ENSP00000349902.4:p.Phe770Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76854A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1996T>C
  hgvsp: ENSP00000389100.1:p.Phe666Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85490T>C
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1465T>C
  hgvsp: ENSP00000441099.1:p.Phe489Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1465T>C
  hgvsp: ENSP00000390603.2:p.Phe489Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1751T>C
  hgvsp: ENSP00000431079.1:p.Phe585Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2308T>C
  hgvsp: ENSP00000412724.2:p.Phe770Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1996T>C
  hgvsp: ENSP00000386405.3:p.Phe666Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76854A>G
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe770Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

7-143421594-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421594
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421594
    reference: chr 7
allele count: 1
allele frequency: 8.420768984623676e-6
allele num: 118754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1466T>A
  hgvsp: ENSP00000441099.1:p.Phe489Tyr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2309T>A
  hgvsp: ENSP00000412724.2:p.Phe770Tyr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76855A>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1997T>A
  hgvsp: ENSP00000389100.1:p.Phe666Tyr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2309T>A
  hgvsp: ENSP00000349902.4:p.Phe770Tyr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1997T>A
  hgvsp: ENSP00000386405.3:p.Phe666Tyr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76855A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76855A>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1466T>A
  hgvsp: ENSP00000390603.2:p.Phe489Tyr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85489T>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2309T>A
  hgvsp: ENSP00000404265.2:p.Phe770Tyr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1752T>A
  hgvsp: ENSP00000431079.1:p.Phe585Tyr
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe770Tyr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

7-143421595-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421595
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421595
    reference: chr 7
allele count: 1
allele frequency: 8.43397881384522e-6
allele num: 118568
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2310C>G
  hgvsp: ENSP00000404265.2:p.Phe770Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76856G>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2310C>G
  hgvsp: ENSP00000412724.2:p.Phe770Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1998C>G
  hgvsp: ENSP00000386405.3:p.Phe666Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1467C>G
  hgvsp: ENSP00000390603.2:p.Phe489Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1753C>G
  hgvsp: ENSP00000431079.1:p.Phe585Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76856G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2310C>G
  hgvsp: ENSP00000349902.4:p.Phe770Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1467C>G
  hgvsp: ENSP00000441099.1:p.Phe489Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1998C>G
  hgvsp: ENSP00000389100.1:p.Phe666Leu
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85488C>G
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76856G>C
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe770Leu
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

7-143421595-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421595
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421595
    reference: chr 7
allele count: 1
allele frequency: 8.43397881384522e-6
allele num: 118568
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85488C>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2310C>T
  hgvsp: ENST00000444908.2:c.2310C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76856G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76856G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2310C>T
  hgvsp: ENST00000441159.2:c.2310C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.1998C>T
  hgvsp: ENST00000409703.3:c.1998C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2310C>T
  hgvsp: ENST00000357344.4:c.2310C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1467C>T
  hgvsp: ENST00000411497.2:c.1467C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.1998C>T
  hgvsp: ENST00000411935.1:c.1998C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1467C>T
  hgvsp: ENST00000425618.2:c.1467C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1753C>T
  hgvsp: ENST00000518791.1:c.1753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76856G>A
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6311
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe770Phe
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/7-143421599-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421599
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421599
    reference: chr 7
allele count: 49
allele frequency: 4.137954330495879e-4
allele num: 118416
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2002C>A
  hgvsp: ENSP00000386405.3:p.Pro668Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1757C>A
  hgvsp: ENSP00000431079.1:p.Pro587Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2314C>A
  hgvsp: ENSP00000404265.2:p.Pro772Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1471C>A
  hgvsp: ENSP00000390603.2:p.Pro491Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85484C>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76860G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1471C>A
  hgvsp: ENSP00000441099.1:p.Pro491Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2314C>A
  hgvsp: ENSP00000349902.4:p.Pro772Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2314C>A
  hgvsp: ENSP00000412724.2:p.Pro772Thr
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76860G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76860G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2002C>A
  hgvsp: ENSP00000389100.1:p.Pro668Thr
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 41229
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
hgvs: p.Pro772Thr
num of homozygotes: 1
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS

7-143421600-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421600
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421600
    reference: chr 7
allele count: 1
allele frequency: 8.447372867038351e-6
allele num: 118380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1472C>G
  hgvsp: ENSP00000390603.2:p.Pro491Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2315C>G
  hgvsp: ENSP00000412724.2:p.Pro772Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2315C>G
  hgvsp: ENSP00000404265.2:p.Pro772Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76861G>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85483C>G
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2003C>G
  hgvsp: ENSP00000389100.1:p.Pro668Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76861G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2315C>G
  hgvsp: ENSP00000349902.4:p.Pro772Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2003C>G
  hgvsp: ENSP00000386405.3:p.Pro668Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1472C>G
  hgvsp: ENSP00000441099.1:p.Pro491Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76861G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1758C>G
  hgvsp: ENSP00000431079.1:p.Pro587Arg
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 41145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro772Arg
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-143421601-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421601
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421601
    reference: chr 7
allele count: 6
allele frequency: 5.069708491761724e-5
allele num: 118350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76862T>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2316A>C
  hgvsp: ENST00000441159.2:c.2316A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1473A>C
  hgvsp: ENST00000411497.2:c.1473A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1473A>C
  hgvsp: ENST00000425618.2:c.1473A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76862T>G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2316A>C
  hgvsp: ENST00000444908.2:c.2316A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2316A>C
  hgvsp: ENST00000357344.4:c.2316A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1759A>C
  hgvsp: ENST00000518791.1:c.1759A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2004A>C
  hgvsp: ENST00000411935.1:c.2004A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2004A>C
  hgvsp: ENST00000409703.3:c.2004A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85482A>C
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76862T>G
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5051
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40607
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5956
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Pro772Pro
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ

7-143421613-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421613
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421613
    reference: chr 7
allele count: 55
allele frequency: 4.751373578907357e-4
allele num: 115756
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2328G>C
  hgvsp: ENSP00000349902.4:p.Glu776Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2328G>C
  hgvsp: ENSP00000404265.2:p.Glu776Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2016G>C
  hgvsp: ENSP00000389100.1:p.Glu672Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76874C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1485G>C
  hgvsp: ENSP00000441099.1:p.Glu495Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2016G>C
  hgvsp: ENSP00000386405.3:p.Glu672Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76874C>G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2328G>C
  hgvsp: ENSP00000412724.2:p.Glu776Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1771G>C
  hgvsp: ENSP00000431079.1:p.Glu591Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1485G>C
  hgvsp: ENSP00000390603.2:p.Glu495Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76874C>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85470G>C
  variant of: http://identifiers.org/hgnc/33603
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5798
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7992
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7784
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 35044
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu776Asp
num of homozygotes: 2
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/7-143421625-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421625
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421625
    reference: chr 7
allele count: 5
allele frequency: 4.3594259507908e-5
allele num: 114694
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1497C>A
  hgvsp: ENSP00000390603.2:p.Asn499Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1497C>A
  hgvsp: ENSP00000441099.1:p.Asn499Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2028C>A
  hgvsp: ENSP00000386405.3:p.Asn676Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76886G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2028C>A
  hgvsp: ENSP00000389100.1:p.Asn676Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85458C>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2340C>A
  hgvsp: ENSP00000412724.2:p.Asn780Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2340C>A
  hgvsp: ENSP00000349902.4:p.Asn780Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76886G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2340C>A
  hgvsp: ENSP00000404265.2:p.Asn780Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1783C>A
  hgvsp: ENSP00000431079.1:p.Asn595Lys
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76886G>T
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7420
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 32523
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn780Lys
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

7-143421636-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421636
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421636
    reference: chr 7
allele count: 1
allele frequency: 8.760096010652276e-6
allele num: 114154
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2351T>C
  hgvsp: ENSP00000412724.2:p.Val784Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76897A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1794T>C
  hgvsp: ENSP00000431079.1:p.Val599Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76897A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85447T>C
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2351T>C
  hgvsp: ENSP00000404265.2:p.Val784Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2351T>C
  hgvsp: ENSP00000349902.4:p.Val784Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1508T>C
  hgvsp: ENSP00000441099.1:p.Val503Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1508T>C
  hgvsp: ENSP00000390603.2:p.Val503Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76897A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2039T>C
  hgvsp: ENSP00000386405.3:p.Val680Ala
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2039T>C
  hgvsp: ENSP00000389100.1:p.Val680Ala
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31955
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val784Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

7-143421640-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421640
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421640
    reference: chr 7
allele count: 3
allele frequency: 2.627568448158074e-5
allele num: 114174
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76901G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85443C>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2355C>T
  hgvsp: ENST00000441159.2:c.2355C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2355C>T
  hgvsp: ENST00000444908.2:c.2355C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76901G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2355C>T
  hgvsp: ENST00000357344.4:c.2355C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2043C>T
  hgvsp: ENST00000409703.3:c.2043C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1798C>T
  hgvsp: ENST00000518791.1:c.1798C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1512C>T
  hgvsp: ENST00000411497.2:c.1512C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1512C>T
  hgvsp: ENST00000425618.2:c.1512C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2043C>T
  hgvsp: ENST00000411935.1:c.2043C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76901G>A
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32271
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr785Tyr
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

7-143421641-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421641
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421641
    reference: chr 7
allele count: 9
allele frequency: 7.880772665977828e-5
allele num: 114202
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2356G>A
  hgvsp: ENSP00000349902.4:p.Val786Met
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2044G>A
  hgvsp: ENSP00000386405.3:p.Val682Met
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1513G>A
  hgvsp: ENSP00000441099.1:p.Val505Met
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2356G>A
  hgvsp: ENSP00000404265.2:p.Val786Met
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1513G>A
  hgvsp: ENSP00000390603.2:p.Val505Met
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2044G>A
  hgvsp: ENSP00000389100.1:p.Val682Met
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76902C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76902C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76902C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2356G>A
  hgvsp: ENSP00000412724.2:p.Val786Met
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85442G>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1799G>A
  hgvsp: ENSP00000431079.1:p.Val601Met
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4367
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12968
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4970
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val786Met
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/7-143421644-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421644
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421644
    reference: chr 7
allele count: 1524
allele frequency: 1.334500875656743e-2
allele num: 114200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76905G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2047C>A
  hgvsp: ENSP00000386405.3:p.His683Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1802C>A
  hgvsp: ENSP00000431079.1:p.His602Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2359C>A
  hgvsp: ENSP00000412724.2:p.His787Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1516C>A
  hgvsp: ENSP00000441099.1:p.His506Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2359C>A
  hgvsp: ENSP00000404265.2:p.His787Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1516C>A
  hgvsp: ENSP00000390603.2:p.His506Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2047C>A
  hgvsp: ENSP00000389100.1:p.His683Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2359C>A
  hgvsp: ENSP00000349902.4:p.His787Asn
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85439C>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76905G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76905G>T
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 7.5e0
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 32559
  bin: 2.25e1
  variant carriers: 210
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 1.75e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 3.25e1
  variant carriers: 203
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 13180
  bin: 2.75e1
  variant carriers: 221
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 1.25e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 3.75e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
hgvs: p.His787Asn
num of homozygotes: 23
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

7-143421645-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421645
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421645
    reference: chr 7
allele count: 2
allele frequency: 1.746328344655362e-5
allele num: 114526
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2360A>G
  hgvsp: ENSP00000349902.4:p.His787Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85438A>G
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1803A>G
  hgvsp: ENSP00000431079.1:p.His602Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2360A>G
  hgvsp: ENSP00000412724.2:p.His787Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76906T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1517A>G
  hgvsp: ENSP00000441099.1:p.His506Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76906T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2048A>G
  hgvsp: ENSP00000386405.3:p.His683Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2048A>G
  hgvsp: ENSP00000389100.1:p.His683Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2360A>G
  hgvsp: ENSP00000404265.2:p.His787Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76906T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1517A>G
  hgvsp: ENSP00000390603.2:p.His506Arg
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His787Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

7-143421646-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421646
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421646
    reference: chr 7
allele count: 6
allele frequency: 5.236241774736879e-5
allele num: 114586
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1518T>C
  hgvsp: ENST00000425618.2:c.1518T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1804T>C
  hgvsp: ENST00000518791.1:c.1804T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76907A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1518T>C
  hgvsp: ENST00000411497.2:c.1518T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2049T>C
  hgvsp: ENST00000411935.1:c.2049T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2049T>C
  hgvsp: ENST00000409703.3:c.2049T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2361T>C
  hgvsp: ENST00000357344.4:c.2361T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85437T>C
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2361T>C
  hgvsp: ENST00000444908.2:c.2361T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76907A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76907A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2361T>C
  hgvsp: ENST00000441159.2:c.2361T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3768
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33391
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.His787His
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

7-143421651-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421651
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421651
    reference: chr 7
allele count: 3
allele frequency: 2.606474482614815e-5
allele num: 115098
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76912G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2054C>G
  hgvsp: ENSP00000389100.1:p.Thr685Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2366C>G
  hgvsp: ENSP00000412724.2:p.Thr789Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2054C>G
  hgvsp: ENSP00000386405.3:p.Thr685Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85432C>G
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2366C>G
  hgvsp: ENSP00000404265.2:p.Thr789Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1523C>G
  hgvsp: ENSP00000390603.2:p.Thr508Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1809C>G
  hgvsp: ENSP00000431079.1:p.Thr604Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2366C>G
  hgvsp: ENSP00000349902.4:p.Thr789Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1523C>G
  hgvsp: ENSP00000441099.1:p.Thr508Arg
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76912G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76912G>C
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3082
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13626
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr789Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

7-143421655-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421655
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421655
    reference: chr 7
allele count: 1
allele frequency: 8.645582971659779e-6
allele num: 115666
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1527C>T
  hgvsp: ENST00000425618.2:c.1527C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1527C>T
  hgvsp: ENST00000411497.2:c.1527C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85428C>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2370C>T
  hgvsp: ENST00000444908.2:c.2370C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2370C>T
  hgvsp: ENST00000441159.2:c.2370C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2058C>T
  hgvsp: ENST00000411935.1:c.2058C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2370C>T
  hgvsp: ENST00000357344.4:c.2370C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76916G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2058C>T
  hgvsp: ENST00000409703.3:c.2058C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76916G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76916G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1813C>T
  hgvsp: ENST00000518791.1:c.1813C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val790Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

7-143421661-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421661
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421661
    reference: chr 7
allele count: 1
allele frequency: 8.592689339909605e-6
allele num: 116378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76922C>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2376G>T
  hgvsp: ENST00000444908.2:c.2376G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76922C>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85422G>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1533G>T
  hgvsp: ENST00000411497.2:c.1533G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2376G>T
  hgvsp: ENST00000357344.4:c.2376G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2064G>T
  hgvsp: ENST00000411935.1:c.2064G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2064G>T
  hgvsp: ENST00000409703.3:c.2064G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1533G>T
  hgvsp: ENST00000425618.2:c.1533G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2376G>T
  hgvsp: ENST00000441159.2:c.2376G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1819G>T
  hgvsp: ENST00000518791.1:c.1819G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76922C>A
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly792Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-143421667-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421667
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421667
    reference: chr 7
allele count: 1
allele frequency: 8.543649505322693e-6
allele num: 117046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1539C>A
  hgvsp: ENST00000425618.2:c.1539C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2382C>A
  hgvsp: ENST00000357344.4:c.2382C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2070C>A
  hgvsp: ENST00000409703.3:c.2070C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2382C>A
  hgvsp: ENST00000444908.2:c.2382C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2382C>A
  hgvsp: ENST00000441159.2:c.2382C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76928G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76928G>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1825C>A
  hgvsp: ENST00000518791.1:c.1825C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1539C>A
  hgvsp: ENST00000411497.2:c.1539C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76928G>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2070C>A
  hgvsp: ENST00000411935.1:c.2070C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85416C>A
  variant of: http://identifiers.org/hgnc/33603
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro794Pro
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP

7-143421674-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421674
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421674
    reference: chr 7
allele count: 7
allele frequency: 5.939653124257543e-5
allele num: 117852
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76935G>A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2077C>T
  hgvsp: ENSP00000386405.3:p.Gln693Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1546C>T
  hgvsp: ENSP00000390603.2:p.Gln516Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76935G>A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2389C>T
  hgvsp: ENSP00000412724.2:p.Gln797Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76935G>A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2389C>T
  hgvsp: ENSP00000349902.4:p.Gln797Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2389C>T
  hgvsp: ENSP00000404265.2:p.Gln797Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1832C>T
  hgvsp: ENSP00000431079.1:p.Gln612Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1546C>T
  hgvsp: ENSP00000441099.1:p.Gln516Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2077C>T
  hgvsp: ENSP00000389100.1:p.Gln693Ter
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85409C>T
  variant of: http://identifiers.org/hgnc/33603
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln797Ter
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

7-143421677-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421677
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421677
    reference: chr 7
allele count: 1
allele frequency: 8.466826971924002e-6
allele num: 118108
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2080G>T
  hgvsp: ENSP00000389100.1:p.Ala694Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2392G>T
  hgvsp: ENSP00000404265.2:p.Ala798Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1549G>T
  hgvsp: ENSP00000390603.2:p.Ala517Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85406G>T
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76938C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1549G>T
  hgvsp: ENSP00000441099.1:p.Ala517Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2392G>T
  hgvsp: ENSP00000412724.2:p.Ala798Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76938C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2080G>T
  hgvsp: ENSP00000386405.3:p.Ala694Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76938C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2392G>T
  hgvsp: ENSP00000349902.4:p.Ala798Ser
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1835G>T
  hgvsp: ENSP00000431079.1:p.Ala613Ser
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 14883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala798Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/7-143421678-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421678
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421678
    reference: chr 7
allele count: 1
allele frequency: 8.460236886632826e-6
allele num: 118200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2393C>A
  hgvsp: ENSP00000404265.2:p.Ala798Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1550C>A
  hgvsp: ENSP00000441099.1:p.Ala517Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76939G>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85405C>A
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2393C>A
  hgvsp: ENSP00000412724.2:p.Ala798Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1550C>A
  hgvsp: ENSP00000390603.2:p.Ala517Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76939G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2393C>A
  hgvsp: ENSP00000349902.4:p.Ala798Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76939G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1836C>A
  hgvsp: ENSP00000431079.1:p.Ala613Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2081C>A
  hgvsp: ENSP00000389100.1:p.Ala694Asp
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2081C>A
  hgvsp: ENSP00000386405.3:p.Ala694Asp
  variant of: http://identifiers.org/hgnc/26878
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ala798Asp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

7-143421678-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 143421678
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 143421678
    reference: chr 7
allele count: 1
allele frequency: 8.460236886632826e-6
allele num: 118200
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000390603
  ensembl transcript: ENST00000411497
  gene symbol: FAM115C
  hgvsc: ENST00000411497.2:c.1550C>G
  hgvsp: ENSP00000390603.2:p.Ala517Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000159860
  ensembl transcript: ENST00000456362
  gene symbol: FAM115D
  hgvsc: ENST00000456362.1:n.133-85405C>G
  variant of: http://identifiers.org/hgnc/33603
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000422705
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000422705.2:n.67-76939G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000441099
  ensembl transcript: ENST00000425618
  gene symbol: FAM115C
  hgvsc: ENST00000425618.2:c.1550C>G
  hgvsp: ENSP00000441099.1:p.Ala517Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000412724
  ensembl transcript: ENST00000444908
  gene symbol: FAM115C
  hgvsc: ENST00000444908.2:c.2393C>G
  hgvsp: ENSP00000412724.2:p.Ala798Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000389100
  ensembl transcript: ENST00000411935
  gene symbol: FAM115C
  hgvsc: ENST00000411935.1:c.2081C>G
  hgvsp: ENSP00000389100.1:p.Ala694Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000349902
  ensembl transcript: ENST00000357344
  gene symbol: FAM115C
  hgvsc: ENST00000357344.4:c.2393C>G
  hgvsp: ENSP00000349902.4:p.Ala798Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000431079
  ensembl transcript: ENST00000518791
  gene symbol: FAM115C
  hgvsc: ENST00000518791.1:c.1836C>G
  hgvsp: ENSP00000431079.1:p.Ala613Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000404265
  ensembl transcript: ENST00000441159
  gene symbol: FAM115C
  hgvsc: ENST00000441159.2:c.2393C>G
  hgvsp: ENSP00000404265.2:p.Ala798Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170379
  ensembl protein: ENSP00000386405
  ensembl transcript: ENST00000409703
  gene symbol: FAM115C
  hgvsc: ENST00000409703.3:c.2081C>G
  hgvsp: ENSP00000386405.3:p.Ala694Gly
  variant of: http://identifiers.org/hgnc/26878
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000450076
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000450076.1:n.707-76939G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000253882
  ensembl transcript: ENST00000427403
  gene symbol: RP11-61L23.2
  hgvsc: ENST00000427403.1:n.693-76939G>C
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala798Gly
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 1444
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1465
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 38
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12906
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 668
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1369
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15565
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1437
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2183
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2584
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 9.191176470588235e-4
allele num: 3264
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3362
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.49e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.431e0

MQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

MQ
type: SiteQuality
SIO_000300: 2.611e1

QD
type: SiteQuality
SIO_000300: 1.611e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.7385e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

GenotypeQuality
all individuals: 1349
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 143
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1283
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14057
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1705
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14501
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1232
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2826
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.496e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.288e0

QD
type: SiteQuality
SIO_000300: 1.476e1

DP
type: SiteQuality
SIO_000300: 3.46958e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.203e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.82e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

MQ
type: SiteQuality
SIO_000300: 2.932e1

GenotypeQuality
all individuals: 1787
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1261
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13631
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14819
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1332
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1492
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 3.663003663003663e-4
allele num: 2730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1170
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2130
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.745e0

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

DP
type: SiteQuality
SIO_000300: 3.41702e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.07e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.47e-1

MQ
type: SiteQuality
SIO_000300: 3.133e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.47e-1

QD
type: SiteQuality
SIO_000300: 7.93e0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1315
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1843
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15096
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1873
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1229
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13091
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1094
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14108
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2042
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.289e0

VQSLOD
type: SiteQuality
SIO_000300: -3.729e0

DP
type: SiteQuality
SIO_000300: 3.35636e5

MQ
type: SiteQuality
SIO_000300: 3.606e1

FS
type: SiteQuality
SIO_000300: 2.907e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

MQRankSum
type: SiteQuality
SIO_000300: 2.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.27e-2

QD
type: SiteQuality
SIO_000300: 3.53e0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13867
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8076
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1465
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10724
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.588814744200826e-4
allele num: 6294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 934
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1304
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.18e0

QD
type: SiteQuality
SIO_000300: 2.52e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.51e-1

DP
type: SiteQuality
SIO_000300: 3.02214e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 3.291e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.24e-1

GenotypeQuality
all individuals: 313
bin: 3.25e1
variant carriers: 34

GenotypeQuality
all individuals: 13867
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 37
bin: 8.25e1
variant carriers: 17

GenotypeQuality
all individuals: 10724
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 60

GenotypeQuality
all individuals: 7
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 159
bin: 6.75e1
variant carriers: 35

GenotypeQuality
all individuals: 1465
bin: 1.75e1
variant carriers: 17

GenotypeQuality
all individuals: 96
bin: 5.75e1
variant carriers: 64

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 42

GenotypeQuality
all individuals: 870
bin: 6.25e1
variant carriers: 73

GenotypeQuality
all individuals: 457
bin: 2.75e1
variant carriers: 17

GenotypeQuality
all individuals: 1259
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 39
bin: 7.25e1
variant carriers: 14

GenotypeQuality
all individuals: 8076
bin: 2.25e1
variant carriers: 11

GenotypeQuality
all individuals: 7
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 61

GenotypeQuality
all individuals: 35
bin: 7.75e1
variant carriers: 6

GenotypeQuality
all individuals: 154
bin: 3.75e1
variant carriers: 26

GenotypeQuality
all individuals: 45
bin: 9.75e1
variant carriers: 21

European (Non-Finnish)
type: Population
allele count: 177
allele frequency: 2.812202097235462e-2
allele num: 6294
num of homozygotes: 0

South Asian
type: Population
allele count: 84
allele frequency: 8.993576017130621e-2
allele num: 934
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 1.635514018691589e-2
allele num: 428
num of homozygotes: 0

East Asian
type: Population
allele count: 23
allele frequency: 2.601809954751131e-2
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 36
allele frequency: 2.244389027431421e-2
allele num: 1604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 6.901840490797546e-3
allele num: 1304
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.75e-2
allele num: 80
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.51e-1

QD
type: SiteQuality
SIO_000300: 2.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.24e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-2

DP
type: SiteQuality
SIO_000300: 3.02214e5

MQ
type: SiteQuality
SIO_000300: 3.291e1

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 20
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 20308
bin: 7.5e0
variant carriers: 6

GenotypeQuality
all individuals: 1327
bin: 1.25e1
variant carriers: 9

GenotypeQuality
all individuals: 12716
bin: 2.25e1
variant carriers: 12

GenotypeQuality
all individuals: 173
bin: 3.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1168
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 591
bin: 2.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1916
bin: 1.75e1
variant carriers: 11

GenotypeQuality
all individuals: 126
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1074
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 444
bin: 3.25e1
variant carriers: 5

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 55
bin: 9.75e1
variant carriers: 44

GenotypeQuality
all individuals: 33
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 8.75e1
variant carriers: 3

African
type: Population
allele count: 80
allele frequency: 4.410143329658214e-2
allele num: 1814
num of homozygotes: 17

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1094
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 108
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.90625e-3
allele num: 512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7734
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.5144e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.88e-1

QD
type: SiteQuality
SIO_000300: 1.787e1

VQSLOD
type: SiteQuality
SIO_000300: -3.127e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 7.047e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.99e-2

MQ
type: SiteQuality
SIO_000300: 3.314e1

GenotypeQuality
all individuals: 121
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23397
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1358
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1915
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11587
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1237
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 912
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.603077909586406e-4
allele num: 6238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1288
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.261e1

VQSLOD
type: SiteQuality
SIO_000300: -3.244e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 1.004e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.46e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

DP
type: SiteQuality
SIO_000300: 2.36009e5

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 27681
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10402
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1099
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1581
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1170
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 998
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQ
type: SiteQuality
SIO_000300: 3.854e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 2.23e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.26e-2

DP
type: SiteQuality
SIO_000300: 2.16125e5

GenotypeDepth
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 826
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9859
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30732
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 962
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 166
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 924
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.74e-2

MQ
type: SiteQuality
SIO_000300: 2.897e1

QD
type: SiteQuality
SIO_000300: 2.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.498e0

DP
type: SiteQuality
SIO_000300: 2.02578e5

GenotypeDepth
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 52
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 921
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8894
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31643
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 646
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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Other
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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DP
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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ClippingRankSum
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SIO_000300: 7.27e-1

ReadPosRankSum
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SIO_000300: -4.21e-1

MQRankSum
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SIO_000300: -9.22e-1

MQ
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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African
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South Asian
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DP
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VQSLOD
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ClippingRankSum
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QD
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FS
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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European (Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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InbreedingCoeff
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DP
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ClippingRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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VQSLOD
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MQ
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MQRankSum
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FS
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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Other
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FS
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QD
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InbreedingCoeff
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ReadPosRankSum
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MQ
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ClippingRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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Other
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Latino
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European (Finnish)
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East Asian
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South Asian
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MQRankSum
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BaseQRankSum
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MQ
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FS
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InbreedingCoeff
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DP
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VQSLOD
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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African
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Latino
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European (Non-Finnish)
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Other
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FS
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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QD
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DP
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InbreedingCoeff
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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Other
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South Asian
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQ
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DP
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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FS
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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DP
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 916
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 80
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South Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 5.128205128205128e-3
allele num: 390
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BaseQRankSum
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SIO_000300: 9.24e-1

QD
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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DP
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FS
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MQ
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SIO_000300: 3.859e1

MQRankSum
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SIO_000300: -8.31e-1

ClippingRankSum
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SIO_000300: 5.78e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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MQ
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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FS
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DP
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BaseQRankSum
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SIO_000300: -7.47e-1

QD
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SIO_000300: 1.319e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Latino
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.111111111111111e-2
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MQRankSum
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DP
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FS
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VQSLOD
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InbreedingCoeff
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QD
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ClippingRankSum
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ReadPosRankSum
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MQ
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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East Asian
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South Asian
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VQSLOD
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SIO_000300: -6.335e0

FS
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BaseQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
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SIO_000300: -2.04e-2

ClippingRankSum
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MQ
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MQRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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num of homozygotes: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.979737783075089e-4
allele num: 3356
num of homozygotes: 0

European (Finnish)
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InbreedingCoeff
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FS
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VQSLOD
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BaseQRankSum
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MQ
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ClippingRankSum
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QD
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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Latino
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Other
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European (Non-Finnish)
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allele num: 3442
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QD
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FS
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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DP
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
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allele frequency: 6.472491909385113e-4
allele num: 3090
num of homozygotes: 0

African
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Latino
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Other
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European (Non-Finnish)
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European (Finnish)
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South Asian
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VQSLOD
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DP
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MQ
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InbreedingCoeff
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MQRankSum
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FS
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QD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 23108
bin: 2.25e1
variant carriers: 0

African
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allele count: 6
allele frequency: 1.081470800288392e-3
allele num: 5548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6018
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6866
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.929e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-1

MQ
type: SiteQuality
SIO_000300: 2.475e1

DP
type: SiteQuality
SIO_000300: 8.79462e5

VQSLOD
type: SiteQuality
SIO_000300: -5.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.34e-1

QD
type: SiteQuality
SIO_000300: 4.91e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 1695
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1108
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.588795692243968e-5
allele num: 38628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6040
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.781000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 9.38093e5

MQRankSum
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SIO_000300: 1.26e0

BaseQRankSum
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SIO_000300: 3.79e-1

VQSLOD
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SIO_000300: 1.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

InbreedingCoeff
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SIO_000300: -4.1e-3

MQ
type: SiteQuality
SIO_000300: 2.302e1

QD
type: SiteQuality
SIO_000300: 1.311e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 231
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.367989056087551e-4
allele num: 7310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12956
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3910
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

FS
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -1.059e0

VQSLOD
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SIO_000300: -8.375e0

QD
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SIO_000300: 4.42e0

MQRankSum
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SIO_000300: -1.482e0

ClippingRankSum
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SIO_000300: 1.27e0

ReadPosRankSum
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SIO_000300: -1.694e0

MQ
type: SiteQuality
SIO_000300: 2.179e1

DP
type: SiteQuality
SIO_000300: 9.63528e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2746
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GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8252
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6692
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.350663476180117e-5
allele num: 45970
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4460
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

DP
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SIO_000300: 1.027088e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.53e-1

BaseQRankSum
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SIO_000300: -1.929e0

ReadPosRankSum
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SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: -5.51e0

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

QD
type: SiteQuality
SIO_000300: 2.45e0

MQ
type: SiteQuality
SIO_000300: 2.345e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 29

GenotypeQuality
all individuals: 332
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variant carriers: 324

GenotypeQuality
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GenotypeQuality
all individuals: 528
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 402
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variant carriers: 7

GenotypeQuality
all individuals: 283
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variant carriers: 3

GenotypeQuality
all individuals: 98
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variant carriers: 8

GenotypeQuality
all individuals: 83
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GenotypeQuality
all individuals: 42007
bin: 6.25e1
variant carriers: 5

Latino
type: Population
allele count: 20
allele frequency: 2.179598953792502e-3
allele num: 9176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5052
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.820748445626246e-5
allele num: 51146
num of homozygotes: 0

African
type: Population
allele count: 359
allele frequency: 4.863180709834733e-2
allele num: 7382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7936
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14446
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 4.261363636363636e-3
allele num: 704
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.96e-1

QD
type: SiteQuality
SIO_000300: 5.18e0

MQ
type: SiteQuality
SIO_000300: 2.418e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.04e-1

FS
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VQSLOD
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InbreedingCoeff
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SIO_000300: -6.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.07e-1

DP
type: SiteQuality
SIO_000300: 1.105897e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.896e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.69254450542096e-5
allele num: 14942
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8104
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9736
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54446
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -1.077e0

InbreedingCoeff
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SIO_000300: -2.3e-3

FS
type: SiteQuality
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VQSLOD
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DP
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MQRankSum
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MQ
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SIO_000300: 2.309e1

QD
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SIO_000300: 8.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 478
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variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.76678445229682e-4
allele num: 5660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8262
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 57704
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele count: 0
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Latino
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allele count: 0
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MQ
type: SiteQuality
SIO_000300: 2.689e1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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African
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allele frequency: 1.11632060727841e-4
allele num: 8958
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 59414
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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DP
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ReadPosRankSum
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FS
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VQSLOD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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QD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 3.19677954061094e-3
allele num: 8446
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African
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VQSLOD
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ClippingRankSum
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MQRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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QD
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ReadPosRankSum
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FS
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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East Asian
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African
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European (Finnish)
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allele num: 6260
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South Asian
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European (Non-Finnish)
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allele frequency: 1.087024038760171e-4
allele num: 64396
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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MQ
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MQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11252
num of homozygotes: 0

African
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allele frequency: 5.958291956305859e-4
allele num: 10070
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.545547278291243e-5
allele num: 64702
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Other
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South Asian
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MQRankSum
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DP
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MQ
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ReadPosRankSum
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VQSLOD
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FS
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InbreedingCoeff
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ClippingRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQ
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DP
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FS
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

Other
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Latino
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European (Finnish)
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South Asian
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East Asian
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allele frequency: 5.937136204889407e-3
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African
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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FS
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InbreedingCoeff
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QD
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DP
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MQ
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 3.912363067292645e-4
allele num: 10224
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European (Finnish)
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Latino
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European (Non-Finnish)
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East Asian
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South Asian
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Other
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DP
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ReadPosRankSum
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FS
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 56
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GenotypeQuality
all individuals: 136
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

East Asian
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allele count: 7
allele frequency: 8.139534883720931e-4
allele num: 8600
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-1

DP
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SIO_000300: 1.315179e6

ClippingRankSum
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SIO_000300: -4.72e-1

VQSLOD
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SIO_000300: -5.34e0

FS
type: SiteQuality
SIO_000300: 6.16e-1

ReadPosRankSum
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SIO_000300: 8.88e-1

InbreedingCoeff
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SIO_000300: -5.0e-4

BaseQRankSum
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SIO_000300: -4.005e0

MQ
type: SiteQuality
SIO_000300: 2.489e1

QD
type: SiteQuality
SIO_000300: 6.62e0

GenotypeDepth
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bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.523136442562525e-5
allele num: 65654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.415e0

ClippingRankSum
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SIO_000300: 1.03e0

MQ
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SIO_000300: 2.53e1

ReadPosRankSum
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FS
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SIO_000300: 8.243e0

InbreedingCoeff
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SIO_000300: -4.0e-4

DP
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SIO_000300: 1.313633e6

BaseQRankSum
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SIO_000300: -1.025e0

MQRankSum
type: SiteQuality
SIO_000300: -1.74e0

QD
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SIO_000300: 9.74e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.527510463446675e-5
allele num: 65466
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.219363492257042e-4
allele num: 16402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: 3.12e-1

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

QD
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SIO_000300: 8.800000000000001e0

BaseQRankSum
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SIO_000300: 8.75e-1

FS
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MQRankSum
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ReadPosRankSum
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DP
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SIO_000300: 1.304516e6

MQ
type: SiteQuality
SIO_000300: 2.39e1

VQSLOD
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SIO_000300: -6.607e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 46
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.527510463446675e-5
allele num: 65466
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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SIO_000300: -5.27e-1

ClippingRankSum
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SIO_000300: 1.5e-2

DP
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SIO_000300: 1.304802e6

MQ
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -5.0e-4

ReadPosRankSum
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VQSLOD
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FS
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SIO_000300: 0.0e0

QD
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SIO_000300: 8.26e0

BaseQRankSum
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SIO_000300: -2.636e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65314
num of homozygotes: 0

African
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South Asian
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allele frequency: 6.099048548426445e-5
allele num: 16396
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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DP
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SIO_000300: 1.294384e6

ReadPosRankSum
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FS
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MQRankSum
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MQ
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BaseQRankSum
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ClippingRankSum
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QD
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VQSLOD
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.072196620583717e-5
allele num: 65100
num of homozygotes: 0

Other
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African
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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MQRankSum
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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QD
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FS
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DP
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BaseQRankSum
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MQ
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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Other
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European (Non-Finnish)
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African
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East Asian
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South Asian
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ReadPosRankSum
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QD
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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FS
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VQSLOD
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DP
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 878
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African
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.540737088623197e-5
allele num: 64904
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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MQ
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QD
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VQSLOD
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DP
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BaseQRankSum
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SIO_000300: -1.566e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.540737088623197e-5
allele num: 64904
num of homozygotes: 0

MQRankSum
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SIO_000300: 6.98e-1

MQ
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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VQSLOD
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 9.904912836767037e-5
allele num: 10096
num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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allele frequency: 1.769598301185631e-4
allele num: 11302
num of homozygotes: 0

South Asian
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 46
allele frequency: 7.093073459569482e-4
allele num: 64852
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MQRankSum
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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MQ
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QD
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SIO_000300: 8.960000000000001e0

FS
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SIO_000300: 0.0e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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ReadPosRankSum
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SIO_000300: 1.43e0

DP
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SIO_000300: 1.242858e6

FS
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MQRankSum
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VQSLOD
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BaseQRankSum
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MQ
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InbreedingCoeff
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SIO_000300: 3.5e-3

QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 6
allele frequency: 5.953562214725144e-4
allele num: 10078
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Other
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South Asian
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ClippingRankSum
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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QD
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MQRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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allele num: 63112
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East Asian
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Latino
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European (Finnish)
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allele num: 6348
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South Asian
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MQRankSum
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QD
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BaseQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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FS
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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African
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European (Finnish)
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South Asian
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Latino
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European (Non-Finnish)
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DP
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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QD
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MQ
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FS
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9130
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.190759704691593e-4
allele num: 8398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6308
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.77e0

FS
type: SiteQuality
SIO_000300: 1.902e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.03e-1

MQ
type: SiteQuality
SIO_000300: 2.888e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.53e0

MQRankSum
type: SiteQuality
SIO_000300: -1.154e0

VQSLOD
type: SiteQuality
SIO_000300: -5.748e0

QD
type: SiteQuality
SIO_000300: 5.46e0

DP
type: SiteQuality
SIO_000300: 1.261226e6

GenotypeDepth
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 937
bin: 7.5e0
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2285
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11020
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.83169592526977e-5
allele num: 62090
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.014e0

MQ
type: SiteQuality
SIO_000300: 3.217e1

VQSLOD
type: SiteQuality
SIO_000300: -3.042e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.118e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.07e-1

DP
type: SiteQuality
SIO_000300: 1.275844e6

QD
type: SiteQuality
SIO_000300: 1.1e1

GenotypeDepth
all individuals: 10
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variant carriers: 0

GenotypeDepth
all individuals: 45
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
all individuals: 36
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 5.75e1
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GenotypeQuality
all individuals: 91
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.190759704691593e-4
allele num: 8398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62086
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.062896501721951e-5
allele num: 11034
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 7.628596338273757e-4
allele num: 9176
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.35e0

FS
type: SiteQuality
SIO_000300: 1.838e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

MQ
type: SiteQuality
SIO_000300: 3.024e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

DP
type: SiteQuality
SIO_000300: 1.282659e6

QD
type: SiteQuality
SIO_000300: 5.93e0

GenotypeDepth
all individuals: 16
bin: 8.25e1
variant carriers: 10

GenotypeDepth
all individuals: 58
bin: 5.75e1
variant carriers: 42

GenotypeQuality
all individuals: 231
bin: 1.25e1
variant carriers: 7

GenotypeQuality
all individuals: 4480
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variant carriers: 4

GenotypeQuality
all individuals: 457
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variant carriers: 8

GenotypeQuality
all individuals: 635
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 292
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 936
bin: 4.75e1
variant carriers: 11

GenotypeQuality
all individuals: 266
bin: 7.75e1
variant carriers: 18

GenotypeQuality
all individuals: 111
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variant carriers: 2

GenotypeQuality
all individuals: 1479
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variant carriers: 6

GenotypeQuality
all individuals: 707
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variant carriers: 6

GenotypeQuality
all individuals: 94
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variant carriers: 12

GenotypeQuality
all individuals: 2170
bin: 3.25e1
variant carriers: 9

GenotypeQuality
all individuals: 3136
bin: 6.75e1
variant carriers: 17

GenotypeQuality
all individuals: 392
bin: 7.25e1
variant carriers: 19

GenotypeQuality
all individuals: 1726
bin: 3.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1497
bin: 9.75e1
variant carriers: 1362

GenotypeQuality
all individuals: 41135
bin: 6.25e1
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GenotypeQuality
all individuals: 47
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variant carriers: 23

GenotypeQuality
all individuals: 833
bin: 5.25e1
variant carriers: 7

GenotypeQuality
all individuals: 41
bin: 9.25e1
variant carriers: 12

European (Non-Finnish)
type: Population
allele count: 1127
allele frequency: 1.814756368554958e-2
allele num: 62102
num of homozygotes: 14

East Asian
type: Population
allele count: 2
allele frequency: 2.384927259718579e-4
allele num: 8386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 127
allele frequency: 2.011403230915426e-2
allele num: 6314
num of homozygotes: 4

Other
type: Population
allele count: 11
allele frequency: 1.285046728971963e-2
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 100
allele frequency: 9.069472156720479e-3
allele num: 11026
num of homozygotes: 2

African
type: Population
allele count: 32
allele frequency: 3.486598387448246e-3
allele num: 9178
num of homozygotes: 0

South Asian
type: Population
allele count: 125
allele frequency: 7.650875260129759e-3
allele num: 16338
num of homozygotes: 3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.675e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.88e-2

MQRankSum
type: SiteQuality
SIO_000300: -6.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

MQ
type: SiteQuality
SIO_000300: 2.77e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.792e0

DP
type: SiteQuality
SIO_000300: 1.328758e6

QD
type: SiteQuality
SIO_000300: 7.89e0

GenotypeDepth
all individuals: 81
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 12
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
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variant carriers: 0

GenotypeQuality
all individuals: 642
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variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 435
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
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GenotypeQuality
all individuals: 251
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1581
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GenotypeQuality
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GenotypeQuality
all individuals: 4524
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GenotypeQuality
all individuals: 619
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GenotypeQuality
all individuals: 3451
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GenotypeQuality
all individuals: 191
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GenotypeQuality
all individuals: 1420
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GenotypeQuality
all individuals: 148
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 31
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GenotypeQuality
all individuals: 102
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.086012163336229e-4
allele num: 9208
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.043226623259179e-5
allele num: 11058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.7083e1

MQ
type: SiteQuality
SIO_000300: 2.866e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e-1

QD
type: SiteQuality
SIO_000300: 1.151e1

VQSLOD
type: SiteQuality
SIO_000300: -6.224e0

MQRankSum
type: SiteQuality
SIO_000300: -5.01e-1

DP
type: SiteQuality
SIO_000300: 1.309125e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.0e-1

GenotypeDepth
all individuals: 37
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variant carriers: 0

GenotypeDepth
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 103
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1448
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 476
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variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 9.75e1
variant carriers: 6

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62356
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.667033370003667e-4
allele num: 16362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6336
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.026e1

QD
type: SiteQuality
SIO_000300: 7.62e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.18e-1

VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -9.3e-1

ClippingRankSum
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SIO_000300: -5.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

FS
type: SiteQuality
SIO_000300: 5.52e-1

DP
type: SiteQuality
SIO_000300: 1.313284e6

GenotypeDepth
all individuals: 71
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 311
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GenotypeQuality
all individuals: 976
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GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.788813332056317e-5
allele num: 62646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

VQSLOD
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ClippingRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

DP
type: SiteQuality
SIO_000300: 1.332001e6

MQ
type: SiteQuality
SIO_000300: 2.994e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 149
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GenotypeQuality
all individuals: 312
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GenotypeQuality
all individuals: 108
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GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.587755231653488e-5
allele num: 62982
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.005e1

BaseQRankSum
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VQSLOD
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FS
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DP
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MQRankSum
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SIO_000300: 8.100000000000001e-1

InbreedingCoeff
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SIO_000300: -1.1e-3

QD
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SIO_000300: 9.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.166e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11196
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.577287066246057e-5
allele num: 63400
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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VQSLOD
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SIO_000300: -4.874e0

MQ
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SIO_000300: 2.744e1

QD
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InbreedingCoeff
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SIO_000300: -9.0e-4

BaseQRankSum
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ReadPosRankSum
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SIO_000300: 8.26e-1

FS
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SIO_000300: 1.053e0

DP
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.023122570083896e-4
allele num: 9774
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11236
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63810
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.636e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

MQRankSum
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ClippingRankSum
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SIO_000300: -1.877e0

VQSLOD
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FS
type: SiteQuality
SIO_000300: 2.553e0

BaseQRankSum
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SIO_000300: -2.369e0

QD
type: SiteQuality
SIO_000300: 6.1e0

DP
type: SiteQuality
SIO_000300: 1.378534e6

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 160
bin: 9.75e1
variant carriers: 7

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9918
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.088545392342861e-4
allele num: 64306
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.851e0

InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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DP
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SIO_000300: 1.390483e6

QD
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SIO_000300: 1.022e1

FS
type: SiteQuality
SIO_000300: 1.123e0

MQ
type: SiteQuality
SIO_000300: 2.675e1

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.73e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64466
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

Other
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South Asian
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East Asian
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ClippingRankSum
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SIO_000300: 0.0e0

MQ
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VQSLOD
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BaseQRankSum
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DP
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ReadPosRankSum
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FS
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MQRankSum
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InbreedingCoeff
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.549666821633349e-5
allele num: 64530
num of homozygotes: 0

East Asian
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African
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South Asian
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num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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MQ
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SIO_000300: 3.102e1

ClippingRankSum
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MQRankSum
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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