7-34724206-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724206
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724206
    reference: chr 7
allele count: 3
allele frequency: 2.471536142096851e-5
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.190A>G
  hgvsp: ENSP00000434955.1:p.Ile64Val
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.190A>G
  hgvsp: ENSP00000370953.1:p.Ile64Val
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44143T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.190A>G
  hgvsp: ENSP00000370955.2:p.Ile64Val
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.190A>G
  hgvsp: ENSP00000353788.1:p.Ile64Val
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.190A>G
  hgvsp: ENSP00000433258.1:p.Ile64Val
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41243T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44143T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.190A>G
  hgvsp: ENSP00000379402.2:p.Ile64Val
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44143T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.190A>G
  hgvsp: ENSP00000370950.3:p.Ile64Val
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.190A>G
  hgvsp: ENSP00000370965.3:p.Ile64Val
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44143T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44143T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.190A>G
  hgvsp: ENSP00000352839.1:p.Ile64Val
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19486T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44143T>C
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile64Val
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

7-34724212-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724212
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724212
    reference: chr 7
allele count: 3
allele frequency: 2.471576866040534e-5
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.196G>A
  hgvsp: ENSP00000370955.2:p.Gly66Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44137C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.196G>A
  hgvsp: ENSP00000370953.1:p.Gly66Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.196G>A
  hgvsp: ENSP00000352839.1:p.Gly66Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41249C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19480C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.196G>A
  hgvsp: ENSP00000433258.1:p.Gly66Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.196G>A
  hgvsp: ENSP00000370965.3:p.Gly66Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.196G>A
  hgvsp: ENSP00000379402.2:p.Gly66Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44137C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44137C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.196G>A
  hgvsp: ENSP00000353788.1:p.Gly66Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44137C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.196G>A
  hgvsp: ENSP00000434955.1:p.Gly66Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44137C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44137C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.196G>A
  hgvsp: ENSP00000370950.3:p.Gly66Arg
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly66Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

7-34724213-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724213
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724213
    reference: chr 7
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44136C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41250C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.197G>A
  hgvsp: ENSP00000370955.2:p.Gly66Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.197G>A
  hgvsp: ENSP00000370953.1:p.Gly66Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44136C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.197G>A
  hgvsp: ENSP00000352839.1:p.Gly66Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.197G>A
  hgvsp: ENSP00000370965.3:p.Gly66Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.197G>A
  hgvsp: ENSP00000370950.3:p.Gly66Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19479C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.197G>A
  hgvsp: ENSP00000434955.1:p.Gly66Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.197G>A
  hgvsp: ENSP00000379402.2:p.Gly66Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44136C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44136C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.197G>A
  hgvsp: ENSP00000433258.1:p.Gly66Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.197G>A
  hgvsp: ENSP00000353788.1:p.Gly66Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44136C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44136C>T
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23385
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly66Glu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

7-34724217-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724217
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724217
    reference: chr 7
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44132G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41254G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.201C>T
  hgvsp: ENST00000465305.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44132G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44132G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44132G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44132G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.201C>T
  hgvsp: ENST00000381553.3:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.201C>T
  hgvsp: ENST00000531252.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.201C>T
  hgvsp: ENST00000396095.2:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.201C>T
  hgvsp: ENST00000359791.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.201C>T
  hgvsp: ENST00000381542.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.201C>T
  hgvsp: ENST00000381539.3:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.201C>T
  hgvsp: ENST00000360581.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.201C>T
  hgvsp: ENST00000381544.2:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19475G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44132G>A
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5524
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn67Asn
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

7-34724218-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724218
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724218
    reference: chr 7
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44131A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.202T>C
  hgvsp: ENSP00000370965.3:p.Ser68Pro
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.202T>C
  hgvsp: ENSP00000433258.1:p.Ser68Pro
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.202T>C
  hgvsp: ENSP00000379402.2:p.Ser68Pro
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.202T>C
  hgvsp: ENSP00000353788.1:p.Ser68Pro
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.202T>C
  hgvsp: ENSP00000370955.2:p.Ser68Pro
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.202T>C
  hgvsp: ENSP00000434955.1:p.Ser68Pro
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.202T>C
  hgvsp: ENSP00000370953.1:p.Ser68Pro
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44131A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44131A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.202T>C
  hgvsp: ENSP00000370950.3:p.Ser68Pro
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41255A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44131A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.202T>C
  hgvsp: ENSP00000352839.1:p.Ser68Pro
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44131A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44131A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19474A>G
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser68Pro
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

7-34724221-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724221
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724221
    reference: chr 7
allele count: 2
allele frequency: 1.647935137272997e-5
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.205G>A
  hgvsp: ENSP00000370953.1:p.Val69Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.205G>A
  hgvsp: ENSP00000379402.2:p.Val69Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.205G>A
  hgvsp: ENSP00000370965.3:p.Val69Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.205G>A
  hgvsp: ENSP00000352839.1:p.Val69Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.205G>A
  hgvsp: ENSP00000370950.3:p.Val69Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44128C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.205G>A
  hgvsp: ENSP00000433258.1:p.Val69Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44128C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.205G>A
  hgvsp: ENSP00000370955.2:p.Val69Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19471C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.205G>A
  hgvsp: ENSP00000353788.1:p.Val69Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.205G>A
  hgvsp: ENSP00000434955.1:p.Val69Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44128C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44128C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44128C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41258C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44128C>T
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val69Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

7-34724222-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724222
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724222
    reference: chr 7
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44127A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44127A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.206T>C
  hgvsp: ENSP00000370953.1:p.Val69Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44127A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.206T>C
  hgvsp: ENSP00000353788.1:p.Val69Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.206T>C
  hgvsp: ENSP00000370955.2:p.Val69Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44127A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44127A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41259A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.206T>C
  hgvsp: ENSP00000370965.3:p.Val69Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.206T>C
  hgvsp: ENSP00000352839.1:p.Val69Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.206T>C
  hgvsp: ENSP00000379402.2:p.Val69Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.206T>C
  hgvsp: ENSP00000433258.1:p.Val69Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44127A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19470A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.206T>C
  hgvsp: ENSP00000370950.3:p.Val69Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.206T>C
  hgvsp: ENSP00000434955.1:p.Val69Ala
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val69Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

7-34724226-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724226
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724226
    reference: chr 7
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.210G>C
  hgvsp: ENST00000381544.2:c.210G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.210G>C
  hgvsp: ENST00000381553.3:c.210G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.210G>C
  hgvsp: ENST00000360581.1:c.210G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.210G>C
  hgvsp: ENST00000531252.1:c.210G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44123C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44123C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44123C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.210G>C
  hgvsp: ENST00000396095.2:c.210G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.210G>C
  hgvsp: ENST00000465305.1:c.210G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44123C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.210G>C
  hgvsp: ENST00000359791.1:c.210G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.210G>C
  hgvsp: ENST00000381542.1:c.210G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.210G>C
  hgvsp: ENST00000381539.3:c.210G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44123C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41263C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44123C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19466C>G
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val70Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum

7-34724238-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724238
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724238
    reference: chr 7
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.222A>G
  hgvsp: ENST00000381542.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19454T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44111T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44111T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.222A>G
  hgvsp: ENST00000465305.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.222A>G
  hgvsp: ENST00000359791.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.222A>G
  hgvsp: ENST00000381544.2:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.222A>G
  hgvsp: ENST00000381539.3:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.222A>G
  hgvsp: ENST00000531252.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44111T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.222A>G
  hgvsp: ENST00000381553.3:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44111T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.222A>G
  hgvsp: ENST00000396095.2:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44111T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.222A>G
  hgvsp: ENST00000360581.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44111T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41275T>C
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr74Thr
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

7-34724239-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724239
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724239
    reference: chr 7
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.223T>A
  hgvsp: ENSP00000353788.1:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.223T>A
  hgvsp: ENSP00000370950.3:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44110A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.223T>A
  hgvsp: ENSP00000433258.1:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.223T>A
  hgvsp: ENSP00000370965.3:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44110A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.223T>A
  hgvsp: ENSP00000379402.2:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41276A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44110A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.223T>A
  hgvsp: ENSP00000352839.1:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44110A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19453A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.223T>A
  hgvsp: ENSP00000370953.1:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.223T>A
  hgvsp: ENSP00000370955.2:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.223T>A
  hgvsp: ENSP00000434955.1:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44110A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44110A>T
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Trp75Arg
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ

7-34724239-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724239
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724239
    reference: chr 7
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.223T>C
  hgvsp: ENSP00000370953.1:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44110A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44110A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.223T>C
  hgvsp: ENSP00000370965.3:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.223T>C
  hgvsp: ENSP00000379402.2:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.223T>C
  hgvsp: ENSP00000353788.1:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41276A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.223T>C
  hgvsp: ENSP00000433258.1:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.223T>C
  hgvsp: ENSP00000370955.2:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.223T>C
  hgvsp: ENSP00000352839.1:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19453A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44110A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44110A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.223T>C
  hgvsp: ENSP00000434955.1:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44110A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.223T>C
  hgvsp: ENSP00000370950.3:p.Trp75Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44110A>G
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp75Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

7-34724247-AAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724247
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724244
    reference: chr 7
allele count: 16
allele frequency: 1.318630602119699e-4
allele num: 121338
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44099_160+44101delCTT
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.238_240delAAG
  hgvsp: ENSP00000433258.1:p.Lys80del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.238_240delAAG
  hgvsp: ENSP00000353788.1:p.Lys80del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.238_240delAAG
  hgvsp: ENSP00000370965.3:p.Lys80del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.238_240delAAG
  hgvsp: ENSP00000352839.1:p.Lys80del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.238_240delAAG
  hgvsp: ENSP00000434955.1:p.Lys80del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.238_240delAAG
  hgvsp: ENSP00000370953.1:p.Lys80del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.238_240delAAG
  hgvsp: ENSP00000370950.3:p.Lys80del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44099_244+44101delCTT
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44099_279+44101delCTT
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.238_240delAAG
  hgvsp: ENSP00000370955.2:p.Lys80del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44099_279+44101delCTT
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19442_399+19444delCTT
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41287_245-41285delCTT
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44099_164+44101delCTT
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.238_240delAAG
  hgvsp: ENSP00000379402.2:p.Lys80del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44099_279+44101delCTT
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys80del
num of homozygotes: 1
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: AAAG
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

7-34724251-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724251
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724251
    reference: chr 7
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44098T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.235A>G
  hgvsp: ENSP00000352839.1:p.Lys79Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.235A>G
  hgvsp: ENSP00000370955.2:p.Lys79Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.235A>G
  hgvsp: ENSP00000434955.1:p.Lys79Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.235A>G
  hgvsp: ENSP00000353788.1:p.Lys79Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44098T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.235A>G
  hgvsp: ENSP00000379402.2:p.Lys79Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.235A>G
  hgvsp: ENSP00000370950.3:p.Lys79Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41288T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.235A>G
  hgvsp: ENSP00000370965.3:p.Lys79Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.235A>G
  hgvsp: ENSP00000370953.1:p.Lys79Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44098T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.235A>G
  hgvsp: ENSP00000433258.1:p.Lys79Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44098T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44098T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44098T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19441T>C
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys79Glu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP

7-34724256-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724256
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724256
    reference: chr 7
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.240G>T
  hgvsp: ENSP00000434955.1:p.Lys80Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44093C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.240G>T
  hgvsp: ENSP00000433258.1:p.Lys80Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.240G>T
  hgvsp: ENSP00000370955.2:p.Lys80Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44093C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19436C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41293C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44093C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.240G>T
  hgvsp: ENSP00000370950.3:p.Lys80Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.240G>T
  hgvsp: ENSP00000353788.1:p.Lys80Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.240G>T
  hgvsp: ENSP00000370965.3:p.Lys80Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.240G>T
  hgvsp: ENSP00000379402.2:p.Lys80Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.240G>T
  hgvsp: ENSP00000370953.1:p.Lys80Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.240G>T
  hgvsp: ENSP00000352839.1:p.Lys80Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44093C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44093C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44093C>A
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys80Asn
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

7-34724264-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724264
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724264
    reference: chr 7
allele count: 1
allele frequency: 8.24715060946443e-6
allele num: 121254
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.248T>C
  hgvsp: ENSP00000433258.1:p.Met83Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44085A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.248T>C
  hgvsp: ENSP00000434955.1:p.Met83Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.248T>C
  hgvsp: ENSP00000370965.3:p.Met83Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44085A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44085A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.248T>C
  hgvsp: ENSP00000379402.2:p.Met83Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.248T>C
  hgvsp: ENSP00000353788.1:p.Met83Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44085A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.248T>C
  hgvsp: ENSP00000370955.2:p.Met83Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44085A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.248T>C
  hgvsp: ENSP00000370950.3:p.Met83Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.248T>C
  hgvsp: ENSP00000352839.1:p.Met83Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.248T>C
  hgvsp: ENSP00000370953.1:p.Met83Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19428A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44085A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41301A>G
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met83Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

7-34724267-CCTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724267
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724264
    reference: chr 7
allele count: 3
allele frequency: 2.474349246148263e-5
allele num: 121244
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.255_257delCTT
  hgvsp: ENSP00000370955.2:p.Phe86del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.255_257delCTT
  hgvsp: ENSP00000353788.1:p.Phe86del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44079_279+44081delAAG
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.255_257delCTT
  hgvsp: ENSP00000352839.1:p.Phe86del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44079_279+44081delAAG
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19422_399+19424delAAG
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44079_279+44081delAAG
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.255_257delCTT
  hgvsp: ENSP00000379402.2:p.Phe86del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.255_257delCTT
  hgvsp: ENSP00000370953.1:p.Phe86del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.255_257delCTT
  hgvsp: ENSP00000434955.1:p.Phe86del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.255_257delCTT
  hgvsp: ENSP00000433258.1:p.Phe86del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.255_257delCTT
  hgvsp: ENSP00000370965.3:p.Phe86del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.255_257delCTT
  hgvsp: ENSP00000370950.3:p.Phe86del
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44079_244+44081delAAG
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41307_245-41305delAAG
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44079_160+44081delAAG
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44079_164+44081delAAG
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe86del
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: CCTT
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ

7-34724276-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724276
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724276
    reference: chr 7
allele count: 1
allele frequency: 8.252867871585376e-6
allele num: 121170
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.260T>C
  hgvsp: ENSP00000370955.2:p.Val87Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.260T>C
  hgvsp: ENSP00000434955.1:p.Val87Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.260T>C
  hgvsp: ENSP00000353788.1:p.Val87Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.260T>C
  hgvsp: ENSP00000379402.2:p.Val87Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.260T>C
  hgvsp: ENSP00000370965.3:p.Val87Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44073A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41313A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.260T>C
  hgvsp: ENSP00000370953.1:p.Val87Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44073A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44073A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44073A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.260T>C
  hgvsp: ENSP00000352839.1:p.Val87Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.260T>C
  hgvsp: ENSP00000433258.1:p.Val87Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44073A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.260T>C
  hgvsp: ENSP00000370950.3:p.Val87Ala
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19416A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44073A>G
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val87Ala
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

7-34724294-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724294
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724294
    reference: chr 7
allele count: 1
allele frequency: 8.271024945411235e-6
allele num: 120904
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.278C>T
  hgvsp: ENSP00000370955.2:p.Thr93Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.278C>T
  hgvsp: ENSP00000370953.1:p.Thr93Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.278C>T
  hgvsp: ENSP00000434955.1:p.Thr93Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.278C>T
  hgvsp: ENSP00000370965.3:p.Thr93Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.278C>T
  hgvsp: ENSP00000433258.1:p.Thr93Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.278C>T
  hgvsp: ENSP00000353788.1:p.Thr93Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44055G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44055G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44055G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19398G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44055G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44055G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.278C>T
  hgvsp: ENSP00000379402.2:p.Thr93Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41331G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.278C>T
  hgvsp: ENSP00000370950.3:p.Thr93Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44055G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.278C>T
  hgvsp: ENSP00000352839.1:p.Thr93Ile
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16830
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr93Ile
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

7-34724296-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724296
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724296
    reference: chr 7
allele count: 1
allele frequency: 8.272667107875579e-6
allele num: 120880
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41333C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44053C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44053C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280G>A
  hgvsp: ENSP00000379402.2:p.Asp94Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280G>A
  hgvsp: ENSP00000370950.3:p.Asp94Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280G>A
  hgvsp: ENSP00000370965.3:p.Asp94Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44053C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44053C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44053C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280G>A
  hgvsp: ENSP00000353788.1:p.Asp94Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280G>A
  hgvsp: ENSP00000370955.2:p.Gly94Ser
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280G>A
  hgvsp: ENSP00000433258.1:p.Asp94Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280G>A
  hgvsp: ENSP00000370953.1:p.Glu94Lys
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.280G>A
  hgvsp: ENSP00000434955.1:p.Val94Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44053C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280G>A
  hgvsp: ENSP00000352839.1:p.Asp94Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19396C>T
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp94Asn
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

7-34724305-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724305
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724305
    reference: chr 7
allele count: 2
allele frequency: 1.658182300562124e-5
allele num: 120614
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+9C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.280+9C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41342G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44044G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+9C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+9C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44044G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44044G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44044G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44044G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+9C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+9C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44044G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+9C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19387G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+9C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+9C>G
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

7-34724307-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724307
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724307
    reference: chr 7
allele count: 1
allele frequency: 8.29476268683953e-6
allele num: 120558
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44042T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44042T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+11A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44042T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44042T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+11A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19385T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44042T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+11A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+11A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41344T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44042T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+11A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+11A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.280+11A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+11A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+11A>G
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

7-34724308-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724308
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724308
    reference: chr 7
allele count: 1
allele frequency: 8.295726041943191e-6
allele num: 120544
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44041A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+12T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.280+12T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+12T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+12T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44041A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+12T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+12T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44041A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44041A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44041A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41345A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+12T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+12T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+12T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19384A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44041A>G
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22472
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD

7-34724329-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724329
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724329
    reference: chr 7
allele count: 1
allele frequency: 8.348778573694668e-6
allele num: 119778
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+33T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19363A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44020A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44020A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+33T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+33T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44020A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44020A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41366A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+33T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+33T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+33T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44020A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44020A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.280+33T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+33T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+33T>C
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/7-34724330-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724330
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724330
    reference: chr 7
allele count: 2
allele frequency: 1.670034569715593e-5
allele num: 119758
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44019T>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+34A>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.280+34A>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+34A>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41367T>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+34A>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+34A>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+34A>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+34A>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+34A>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44019T>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44019T>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44019T>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+34A>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19362T>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44019T>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44019T>G
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14399
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

7-34724330-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724330
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724330
    reference: chr 7
allele count: 4
allele frequency: 3.340069139431186e-5
allele num: 119758
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44019T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.280+34A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+34A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+34A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+34A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44019T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44019T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+34A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19362T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44019T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+34A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41367T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+34A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44019T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+34A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44019T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+34A>G
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14399
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

7-34724331-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724331
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724331
    reference: chr 7
allele count: 1
allele frequency: 8.35282325425994e-6
allele num: 119720
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44018A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.280+35T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+35T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44018A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19361A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+35T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+35T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41368A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44018A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44018A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+35T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+35T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44018A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+35T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44018A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+35T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+35T>C
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14262
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

7-34724332-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724332
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724332
    reference: chr 7
allele count: 1
allele frequency: 8.353102342209896e-6
allele num: 119716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44017T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44017T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+36A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+36A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44017T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44017T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+36A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+36A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44017T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41369T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+36A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19360T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44017T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+36A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+36A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+36A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.280+36A>T
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14093
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

7-34724333-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724333
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724333
    reference: chr 7
allele count: 4
allele frequency: 3.344201989800184e-5
allele num: 119610
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+37T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44016A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+37T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+37T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+37T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44016A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44016A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19359A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44016A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+37T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+37T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+37T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.280+37T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44016A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44016A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+37T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41370A>G
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

7-34724335-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724335
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724335
    reference: chr 7
allele count: 1
allele frequency: 8.369601606963508e-6
allele num: 119480
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+39T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44014A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44014A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+39T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44014A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+39T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+39T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+39T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+39T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44014A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41372A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44014A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.280+39T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19357A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44014A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+39T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+39T>C
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15540
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

7-34724339-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724339
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724339
    reference: chr 7
allele count: 1
allele frequency: 8.398138972403716e-6
allele num: 119074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+43G>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+43G>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44010C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44010C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.280+43G>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19353C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+43G>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44010C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44010C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+43G>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44010C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+43G>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+43G>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+43G>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+43G>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41376C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44010C>A
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9957
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6308
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

7-34724342-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34724342
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34724342
    reference: chr 7
allele count: 1
allele frequency: 8.517307168165713e-6
allele num: 117408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+19350G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+44007G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+46C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+46C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+44007G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+46C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+44007G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+44007G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+46C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+46C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+46C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-41379G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+44007G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+44007G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+46C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+46C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.280+46C>T
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9748
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum

7-34725322-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34725322
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34725322
    reference: chr 7
allele count: 2910
allele frequency: 3.050954078423149e-1
allele num: 9538
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+43027A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+43027A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+1026T>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+43027A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+1026T>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+18370A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+1026T>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+1026T>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+43027A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+43027A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+43027A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.281-41T>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-42359A>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+1026T>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+1026T>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+1026T>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+1026T>A
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.25e1
  variant carriers: 210
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 4.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 2.75e1
  variant carriers: 463
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 2.5e0
  variant carriers: 75
genotype quality: GenotypeQuality
num of homozygotes: 461
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

7-34725324-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34725324
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34725323
    reference: chr 7
allele count: 1
allele frequency: 1.182312603452353e-4
allele num: 8458
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+1030delT
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+43024delA
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+43024delA
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+43024delA
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+1030delT
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+43024delA
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-42362delA
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+1030delT
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+1030delT
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+1030delT
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+43024delA
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+43024delA
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+1030delT
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+18367delA
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+1030delT
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+1030delT
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.281-37delT
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: GT
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ

7-34725344-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34725344
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34725344
    reference: chr 7
allele count: 7
allele frequency: 1.041976778803215e-3
allele num: 6718
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+1048C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-42381G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+1048C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+43005G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+18348G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+1048C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+1048C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+1048C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+1048C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+1048C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+43005G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+43005G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+43005G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+43005G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.281-19C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+1048C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+43005G>C
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum

7-34725368-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34725368
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34725368
    reference: chr 7
allele count: 13
allele frequency: 3.399581589958159e-3
allele num: 3824
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+42981G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+42981G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+1072C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+18324G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-42405G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+42981G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+42981G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.*1C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+42981G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+1072C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+1072C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+1072C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+1072C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+42981G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+1072C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+1072C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+1072C>T
  variant of: http://identifiers.org/hgnc/23631
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP

7-34725369-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34725369
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34725369
    reference: chr 7
allele count: 1
allele frequency: 2.641310089804543e-4
allele num: 3786
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000358772
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000358772.4:n.279+42980T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000544556
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000544556.1:n.279+42980T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000419766
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000419766.1:n.160+42980T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.280+1073A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.280+1073A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000537560
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000537560.1:n.279+42980T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.280+1073A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.280+1073A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.280+1073A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.280+1073A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000434955
  ensembl transcript: ENST00000465305
  gene symbol: NPSR1
  hgvsc: ENST00000465305.1:c.*2A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.164+42980T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.280+1073A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000439852
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000439852.1:n.399+18323T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.280+1073A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.244+42980T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.245-42406T>A
  variant of: http://identifiers.org/hgnc/22128
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

7-34818031-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818031
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818031
    reference: chr 7
allele count: 1
allele frequency: 9.994802702594651e-6
allele num: 100052
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49603A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17228A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17228A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.281-76T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.281-43T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17228A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.281-43T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.281-43T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-9979A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.281-43T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33351T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.281-43T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48982T>C
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3515
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10011
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

7-34818036-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818036
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818036
    reference: chr 7
allele count: 4
allele frequency: 3.95350676049656e-5
allele num: 101176
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.281-71A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.281-38A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.281-38A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48977A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33346A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.281-38A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17233T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-9984T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.281-38A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49608T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.281-38A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17233T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17233T>C
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19725
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5534
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

7-34818041-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818041
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818041
    reference: chr 7
allele count: 3
allele frequency: 2.882952142994426e-5
allele num: 104060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17238G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.281-33C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.281-33C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49613G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17238G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33341C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.281-66C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.281-33C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-9989G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48972C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.281-33C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.281-33C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17238G>A
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9625
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

7-34818059-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818059
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818059
    reference: chr 7
allele count: 2
allele frequency: 1.708613118731526e-5
allele num: 117054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.281-15G>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.281-15G>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.281-15G>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17256C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.281-48G>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17256C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33323G>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.281-15G>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10007C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49631C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17256C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48954G>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.281-15G>C
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD

7-34818062-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818062
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818062
    reference: chr 7
allele count: 4
allele frequency: 3.390520105784227e-5
allele num: 117976
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.281-12C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48951C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17259G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.281-12C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17259G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.281-45C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17259G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.281-12C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33320C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10010G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.281-12C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49634G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.281-12C>T
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42703
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

7-34818063-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818063
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818063
    reference: chr 7
allele count: 1
allele frequency: 8.448943037226043e-6
allele num: 118358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48950G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.281-44G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33319G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.281-11G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17260C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17260C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.281-11G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17260C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10011C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.281-11G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49635C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.281-11G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.281-11G>A
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

7-34818071-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818071
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818071
    reference: chr 7
allele count: 1
allele frequency: 8.368761088608442e-6
allele num: 119492
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17268A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48942T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.281-3T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17268A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33311T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10019A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.281-3T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.281-3T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.281-36T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.281-3T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.281-3T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17268A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49643A>G
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.281-3T>C
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/7-34818077-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818077
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818077
    reference: chr 7
allele count: 1
allele frequency: 8.331805835596807e-6
allele num: 120022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17274G>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49649G>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.284C>A
  hgvsp: ENSP00000370965.3:p.Ser95Tyr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.281-30C>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48936C>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.284C>A
  hgvsp: ENSP00000353788.1:p.Ser95Tyr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.284C>A
  hgvsp: ENSP00000370950.3:p.Ser95Tyr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10025G>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.284C>A
  hgvsp: ENSP00000352839.1:p.Ser95Tyr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.284C>A
  hgvsp: ENSP00000379402.2:p.Ser95Tyr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17274G>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33305C>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17274G>T
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser95Tyr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum

7-34818085-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818085
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818085
    reference: chr 7
allele count: 2
allele frequency: 1.660605456749531e-5
allele num: 120438
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49657C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.292G>T
  hgvsp: ENSP00000353788.1:p.Gly98Ter
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.292G>T
  hgvsp: ENSP00000370965.3:p.Gly98Ter
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.292G>T
  hgvsp: ENSP00000352839.1:p.Gly98Ter
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17282C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.292G>T
  hgvsp: ENSP00000370950.3:p.Gly98Ter
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.292G>T
  hgvsp: ENSP00000379402.2:p.Gly98Ter
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48928G>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17282C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.281-22G>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33297G>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10033C>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17282C>A
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43457
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly98Ter
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

7-34818088-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818088
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818088
    reference: chr 7
allele count: 4
allele frequency: 3.318951211417192e-5
allele num: 120520
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.295C>T
  hgvsp: ENST00000381539.3:c.295C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.295C>T
  hgvsp: ENST00000359791.1:c.295C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17285G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48925C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10036G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.295C>T
  hgvsp: ENST00000360581.1:c.295C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.295C>T
  hgvsp: ENST00000396095.2:c.295C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49660G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17285G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33294C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.295C>T
  hgvsp: ENST00000381553.3:c.295C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17285G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.281-19C>T
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu99Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

7-34818105-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818105
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818105
    reference: chr 7
allele count: 1
allele frequency: 8.278145695364238e-6
allele num: 120800
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.281-2A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.312A>G
  hgvsp: ENST00000381539.3:c.312A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.312A>G
  hgvsp: ENST00000396095.2:c.312A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17302T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.312A>G
  hgvsp: ENST00000360581.1:c.312A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.312A>G
  hgvsp: ENST00000359791.1:c.312A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17302T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10053T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.312A>G
  hgvsp: ENST00000381553.3:c.312A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48908A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33277A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49677T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17302T>C
  variant of: http://identifiers.org/hgnc/22128
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.281-2A>G
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

7-34818107-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818107
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818107
    reference: chr 7
allele count: 1
allele frequency: 8.277460475126231e-6
allele num: 120810
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17304T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.314A>G
  hgvsp: ENSP00000370950.3:p.Asp105Gly
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.314A>G
  hgvsp: ENSP00000370965.3:p.Asp105Gly
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.281A>G
  hgvsp: ENSP00000433258.1:p.Asp94Gly
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.314A>G
  hgvsp: ENSP00000353788.1:p.Asp105Gly
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10055T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.314A>G
  hgvsp: ENSP00000352839.1:p.Asp105Gly
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33275A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.314A>G
  hgvsp: ENSP00000379402.2:p.Asp105Gly
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49679T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17304T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17304T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48906A>G
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8985
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp105Gly
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

7-34818108-TATTAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818108
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818103
    reference: chr 7
allele count: 1
allele frequency: 8.277597510098669e-6
allele num: 120808
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.316_320delATTAA
  hgvsp: ENSP00000370965.3:p.Ile106LeufsTer11
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.283_287delATTAA
  hgvsp: ENSP00000433258.1:p.Ile95LeufsTer11
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.316_320delATTAA
  hgvsp: ENSP00000353788.1:p.Ile106LeufsTer11
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.316_320delATTAA
  hgvsp: ENSP00000379402.2:p.Ile106LeufsTer11
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.316_320delATTAA
  hgvsp: ENSP00000352839.1:p.Ile106LeufsTer11
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.316_320delATTAA
  hgvsp: ENSP00000370950.3:p.Ile106LeufsTer11
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile106LeufsTer11
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: TATTAA
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

7-34818110-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818110
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818110
    reference: chr 7
allele count: 1
allele frequency: 8.277734549608463e-6
allele num: 120806
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17307A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.284T>C
  hgvsp: ENSP00000433258.1:p.Ile95Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.317T>C
  hgvsp: ENSP00000352839.1:p.Ile106Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17307A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.317T>C
  hgvsp: ENSP00000370965.3:p.Ile106Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.317T>C
  hgvsp: ENSP00000353788.1:p.Ile106Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.317T>C
  hgvsp: ENSP00000379402.2:p.Ile106Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49682A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.317T>C
  hgvsp: ENSP00000370950.3:p.Ile106Thr
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10058A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17307A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48903T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33272T>C
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9007
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile106Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

7-34818112-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818112
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818112
    reference: chr 7
allele count: 1
allele frequency: 8.276775368316504e-6
allele num: 120820
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49684T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.319A>G
  hgvsp: ENSP00000352839.1:p.Asn107Asp
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17309T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48901A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.319A>G
  hgvsp: ENSP00000353788.1:p.Asn107Asp
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.319A>G
  hgvsp: ENSP00000370950.3:p.Asn107Asp
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17309T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.286A>G
  hgvsp: ENSP00000433258.1:p.Asn96Asp
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33270A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.319A>G
  hgvsp: ENSP00000379402.2:p.Asn107Asp
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17309T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10060T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.319A>G
  hgvsp: ENSP00000370965.3:p.Asn107Asp
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn107Asp
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD

7-34818113-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818113
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818113
    reference: chr 7
allele count: 54007
allele frequency: 4.465455086651673e-1
allele num: 120944
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.320A>T
  hgvsp: ENSP00000379402.2:p.Asn107Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.287A>T
  hgvsp: ENSP00000433258.1:p.Asn96Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48900A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33269A>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49685T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17310T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.320A>T
  hgvsp: ENSP00000370965.3:p.Asn107Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.320A>T
  hgvsp: ENSP00000353788.1:p.Asn107Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.320A>T
  hgvsp: ENSP00000370950.3:p.Asn107Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17310T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  clinical significance: risk_factor
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.320A>T
  hgvsp: ENSP00000352839.1:p.Asn107Ile
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10061T>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  clinical significance: risk_factor
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17310T>A
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 2.75e1
  variant carriers: 560
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 3.75e1
  variant carriers: 1812
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 5.75e1
  variant carriers: 4021
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 14069
  bin: 2.25e1
  variant carriers: 244
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 7.75e1
  variant carriers: 2381
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 3.25e1
  variant carriers: 1043
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 5.25e1
  variant carriers: 3809
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 6.25e1
  variant carriers: 3905
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
hgvs: p.Asn107Ile
num of homozygotes: 12497
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum

7-34818114-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818114
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818114
    reference: chr 7
allele count: 1
allele frequency: 8.273214640280627e-6
allele num: 120872
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.288T>C
  hgvsp: ENST00000531252.1:c.288T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17311A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.321T>C
  hgvsp: ENST00000360581.1:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17311A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.321T>C
  hgvsp: ENST00000359791.1:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.321T>C
  hgvsp: ENST00000396095.2:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49686A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48899T>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.321T>C
  hgvsp: ENST00000381539.3:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.321T>C
  hgvsp: ENST00000381553.3:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10062A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17311A>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33268T>C
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20571
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn107Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

7-34818118-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818118
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818118
    reference: chr 7
allele count: 1
allele frequency: 8.274309922552459e-6
allele num: 120856
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49690G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.325C>T
  hgvsp: ENSP00000379402.2:p.Arg109Ter
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17315G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17315G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.325C>T
  hgvsp: ENSP00000370965.3:p.Arg109Ter
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33264C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.325C>T
  hgvsp: ENSP00000353788.1:p.Arg109Ter
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.325C>T
  hgvsp: ENSP00000370950.3:p.Arg109Ter
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.292C>T
  hgvsp: ENSP00000433258.1:p.Arg98Ter
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10066G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.325C>T
  hgvsp: ENSP00000352839.1:p.Arg109Ter
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17315G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48895C>T
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24318
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg109Ter
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

7-34818119-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818119
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818119
    reference: chr 7
allele count: 1
allele frequency: 8.274309922552459e-6
allele num: 120856
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17316C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48894G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33263G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10067C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.326G>A
  hgvsp: ENSP00000370965.3:p.Arg109Gln
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49691C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.326G>A
  hgvsp: ENSP00000370950.3:p.Arg109Gln
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17316C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.326G>A
  hgvsp: ENSP00000353788.1:p.Arg109Gln
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.326G>A
  hgvsp: ENSP00000352839.1:p.Arg109Gln
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.293G>A
  hgvsp: ENSP00000433258.1:p.Arg98Gln
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17316C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.326G>A
  hgvsp: ENSP00000379402.2:p.Arg109Gln
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg109Gln
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

7-34818120-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818120
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818120
    reference: chr 7
allele count: 66
allele frequency: 5.460863809366209e-4
allele num: 120860
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17317T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49692T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.327A>G
  hgvsp: ENST00000381553.3:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33262A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.327A>G
  hgvsp: ENST00000360581.1:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.327A>G
  hgvsp: ENST00000396095.2:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48893A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.294A>G
  hgvsp: ENST00000531252.1:c.294A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.327A>G
  hgvsp: ENST00000381539.3:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10068T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.327A>G
  hgvsp: ENST00000359791.1:c.327A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17317T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17317T>C
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20611
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Arg109Arg
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

7-34818128-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818128
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818128
    reference: chr 7
allele count: 1
allele frequency: 8.276912380605539e-6
allele num: 120818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17325C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49700C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17325C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.335G>A
  hgvsp: ENSP00000352839.1:p.Gly112Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.335G>A
  hgvsp: ENSP00000353788.1:p.Gly112Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.335G>A
  hgvsp: ENSP00000379402.2:p.Gly112Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17325C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33254G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48885G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10076C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.335G>A
  hgvsp: ENSP00000370950.3:p.Gly112Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.335G>A
  hgvsp: ENSP00000370965.3:p.Gly112Glu
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.302G>A
  hgvsp: ENSP00000433258.1:p.Gly101Glu
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly112Glu
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

7-34818129-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818129
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818129
    reference: chr 7
allele count: 1
allele frequency: 8.276638360563474e-6
allele num: 120822
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48884A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17326T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.336A>G
  hgvsp: ENST00000359791.1:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.303A>G
  hgvsp: ENST00000531252.1:c.303A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33253A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17326T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10077T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.336A>G
  hgvsp: ENST00000381539.3:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.336A>G
  hgvsp: ENST00000381553.3:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17326T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.336A>G
  hgvsp: ENST00000360581.1:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49701T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.336A>G
  hgvsp: ENST00000396095.2:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly112Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

7-34818137-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818137
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818137
    reference: chr 7
allele count: 6
allele frequency: 4.968944099378882e-5
allele num: 120750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17334G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33245C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17334G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.344C>T
  hgvsp: ENSP00000370950.3:p.Thr115Met
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.344C>T
  hgvsp: ENSP00000353788.1:p.Thr115Met
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.344C>T
  hgvsp: ENSP00000379402.2:p.Thr115Met
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48876C>T
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49709G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10085G>A
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.311C>T
  hgvsp: ENSP00000433258.1:p.Thr104Met
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.344C>T
  hgvsp: ENSP00000352839.1:p.Thr115Met
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.344C>T
  hgvsp: ENSP00000370965.3:p.Thr115Met
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17334G>A
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24304
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr115Met
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

7-34818138-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818138
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818138
    reference: chr 7
allele count: 329
allele frequency: 2.72463768115942e-3
allele num: 120750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17335C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.345G>A
  hgvsp: ENST00000360581.1:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33244G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.345G>A
  hgvsp: ENST00000381553.3:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.345G>A
  hgvsp: ENST00000381539.3:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.312G>A
  hgvsp: ENST00000531252.1:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17335C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17335C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48875G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10086C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.345G>A
  hgvsp: ENST00000396095.2:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.345G>A
  hgvsp: ENST00000359791.1:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49710C>T
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 8715
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 24322
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 20637
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr115Thr
num of homozygotes: 3
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

7-34818143-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818143
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818143
    reference: chr 7
allele count: 1
allele frequency: 8.284180528862085e-6
allele num: 120712
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.350C>G
  hgvsp: ENSP00000379402.2:p.Pro117Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.350C>G
  hgvsp: ENSP00000353788.1:p.Pro117Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17340G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10091G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.317C>G
  hgvsp: ENSP00000433258.1:p.Pro106Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48870C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.350C>G
  hgvsp: ENSP00000370950.3:p.Pro117Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49715G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.350C>G
  hgvsp: ENSP00000352839.1:p.Pro117Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.350C>G
  hgvsp: ENSP00000370965.3:p.Pro117Arg
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33239C>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17340G>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17340G>C
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro117Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

7-34818145-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818145
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818145
    reference: chr 7
allele count: 22
allele frequency: 1.823033195777192e-4
allele num: 120678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.319G>A
  hgvsp: ENSP00000433258.1:p.Asp107Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33237G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10093C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.352G>A
  hgvsp: ENSP00000370965.3:p.Asp118Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17342C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17342C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.352G>A
  hgvsp: ENSP00000370950.3:p.Asp118Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.352G>A
  hgvsp: ENSP00000353788.1:p.Asp118Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.352G>A
  hgvsp: ENSP00000352839.1:p.Asp118Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17342C>T
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48868G>A
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.352G>A
  hgvsp: ENSP00000379402.2:p.Asp118Asn
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49717C>T
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20604
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24457
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8710
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp118Asn
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD

7-34818145-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818145
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818145
    reference: chr 7
allele count: 1
allele frequency: 8.286514526259965e-6
allele num: 120678
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33237G>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.319G>C
  hgvsp: ENSP00000433258.1:p.Asp107His
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.352G>C
  hgvsp: ENSP00000352839.1:p.Asp118His
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.352G>C
  hgvsp: ENSP00000370965.3:p.Asp118His
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.352G>C
  hgvsp: ENSP00000370950.3:p.Asp118His
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17342C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.352G>C
  hgvsp: ENSP00000353788.1:p.Asp118His
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48868G>C
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49717C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.352G>C
  hgvsp: ENSP00000379402.2:p.Asp118His
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10093C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17342C>G
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17342C>G
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20604
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp118His
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

7-34818146-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 34818146
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 34818146
    reference: chr 7
allele count: 1
allele frequency: 8.286239870071759e-6
allele num: 120682
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370953
  ensembl transcript: ENST00000381542
  gene symbol: NPSR1
  hgvsc: ENST00000381542.1:c.281-48867A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000379402
  ensembl transcript: ENST00000396095
  gene symbol: NPSR1
  hgvsc: ENST00000396095.2:c.353A>G
  hgvsp: ENSP00000379402.2:p.Asp118Gly
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000353788
  ensembl transcript: ENST00000360581
  gene symbol: NPSR1
  hgvsc: ENST00000360581.1:c.353A>G
  hgvsp: ENSP00000353788.1:p.Asp118Gly
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370950
  ensembl transcript: ENST00000381539
  gene symbol: NPSR1
  hgvsc: ENST00000381539.3:c.353A>G
  hgvsp: ENSP00000370950.3:p.Asp118Gly
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000433258
  ensembl transcript: ENST00000531252
  gene symbol: NPSR1
  hgvsc: ENST00000531252.1:c.320A>G
  hgvsp: ENSP00000433258.1:p.Asp107Gly
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000442669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000442669.2:n.194-17343T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370955
  ensembl transcript: ENST00000381544
  gene symbol: NPSR1
  hgvsc: ENST00000381544.2:c.281-33236A>G
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000370965
  ensembl transcript: ENST00000381553
  gene symbol: NPSR1
  hgvsc: ENST00000381553.3:c.353A>G
  hgvsp: ENSP00000370965.3:p.Asp118Gly
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000535640
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000535640.1:n.85-17343T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000436945
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000436945.3:n.169-10094T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187258
  ensembl protein: ENSP00000352839
  ensembl transcript: ENST00000359791
  gene symbol: NPSR1
  hgvsc: ENST00000359791.1:c.353A>G
  hgvsp: ENSP00000352839.1:p.Asp118Gly
  variant of: http://identifiers.org/hgnc/23631
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000431669
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000431669.1:n.85-17343T>C
  variant of: http://identifiers.org/hgnc/22128
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000197085
  ensembl transcript: ENST00000539747
  gene symbol: NPSR1-AS1
  hgvsc: ENST00000539747.1:n.85-49718T>C
  variant of: http://identifiers.org/hgnc/22128
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24466
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20617
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8715
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp118Gly
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum

GenotypeDepth
all individuals: 827
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2568
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 230
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23382
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1322
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17147
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5529
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1311
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 442
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 611
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 198
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 276
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1870
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10029
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2795
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35764
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5277
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3311
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.086032e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.58e-1

QD
type: SiteQuality
SIO_000300: 1.308e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 23385
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 310
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 276
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5524
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17148
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5961
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1309
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 377
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1322
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2568
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 198
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2795
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10029
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5274
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35762
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.882952142994427e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.268e0

DP
type: SiteQuality
SIO_000300: 2.086127e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.622e0

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.01e-1

QD
type: SiteQuality
SIO_000300: 1.268e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeDepth
all individuals: 5961
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2569
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 310
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 611
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 828
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5524
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17147
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 229
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 276
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 442
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 198
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35765
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5273
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 663
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2795
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1871
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10028
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.085616e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.418e0

QD
type: SiteQuality
SIO_000300: 5.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.892e1

VQSLOD
type: SiteQuality
SIO_000300: -3.687e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.02e0

GenotypeDepth
all individuals: 310
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1308
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17147
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 276
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 828
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 442
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 611
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 198
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23384
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5962
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 229
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1869
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35760
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10028
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5272
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2795
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

QD
type: SiteQuality
SIO_000300: 1.162e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.674e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.085591e6

FS
type: SiteQuality
SIO_000300: 2.729e0

VQSLOD
type: SiteQuality
SIO_000300: 8.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.66e-1

GenotypeDepth
all individuals: 2568
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23384
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 442
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 611
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 276
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 310
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5962
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 828
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17147
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 198
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1307
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 377
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10028
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5271
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2795
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1869
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35762
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.783e1

FS
type: SiteQuality
SIO_000300: 1.362e0

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.421e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.156e0

VQSLOD
type: SiteQuality
SIO_000300: -3.762e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.085532e6

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 230
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 443
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 828
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2567
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17146
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1308
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 198
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 611
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5521
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 309
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35760
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10028
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1867
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2795
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5272
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 955
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.86e-1

QD
type: SiteQuality
SIO_000300: 1.224e1

FS
type: SiteQuality
SIO_000300: 1.135e0

MQRankSum
type: SiteQuality
SIO_000300: -9.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.376e0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 2.08562e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.992e1

GenotypeDepth
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 276
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23388
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 443
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1322
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1306
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 309
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 230
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 828
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17149
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2568
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5961
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 199
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5270
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3313
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1867
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10027
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35762
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2795
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.648e0

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.59e-1

DP
type: SiteQuality
SIO_000300: 2.085493e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.321e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.5e0

GenotypeDepth
all individuals: 309
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 442
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 23393
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 275
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 610
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1307
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 828
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17146
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 198
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 230
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5961
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1322
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10026
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35765
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2795
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3313
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5269
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1867
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.228e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

DP
type: SiteQuality
SIO_000300: 2.085386e6

FS
type: SiteQuality
SIO_000300: 4.75e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e-1

GenotypeDepth
all individuals: 610
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 231
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1306
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23380
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 825
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1321
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5959
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17140
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2569
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 442
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 308
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 276
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 377
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10022
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5265
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 661
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35744
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3310
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1862
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 9.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.120000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-2

DP
type: SiteQuality
SIO_000300: 2.084817e6

MQRankSum
type: SiteQuality
SIO_000300: 8.29e-1

QD
type: SiteQuality
SIO_000300: 1.441e1

GenotypeDepth
all individuals: 23379
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 275
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 231
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 825
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5513
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17140
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 198
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 442
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5960
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10022
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1862
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35744
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5265
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 954
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3310
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.084792e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: 6.98e-1

QD
type: SiteQuality
SIO_000300: 1.496e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 1.806e0

VQSLOD
type: SiteQuality
SIO_000300: 4.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 23379
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1306
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2567
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 442
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5513
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5960
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 275
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17140
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 610
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 198
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 231
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1862
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5265
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10022
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35744
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3310
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.0e-1

DP
type: SiteQuality
SIO_000300: 2.084792e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.48e-1

FS
type: SiteQuality
SIO_000300: 1.806e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.32e0

QD
type: SiteQuality
SIO_000300: 1.496e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

GenotypeDepth
all individuals: 1317
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23387
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 309
bin: 7.25e1
variant carriers: 3

GenotypeDepth
all individuals: 183
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1306
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5505
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 610
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 17134
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 826
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 279
bin: 7.75e1
variant carriers: 4

GenotypeDepth
all individuals: 228
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 199
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 2566
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1861
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3309
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10023
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35737
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2793
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5265
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 660
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.622140050843541e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.056935190793458e-4
allele num: 16510
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.803e1

FS
type: SiteQuality
SIO_000300: 2.882e0

MQRankSum
type: SiteQuality
SIO_000300: -9.54e-1

DP
type: SiteQuality
SIO_000300: 2.08459e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.52e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.88e-1

MQ
type: SiteQuality
SIO_000300: 5.754e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.8e-1

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1317
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1308
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2565
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23382
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17126
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 276
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5494
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 230
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5953
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 199
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5250
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10019
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3308
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2791
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1861
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35691
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQ
type: SiteQuality
SIO_000300: 5.865e1

FS
type: SiteQuality
SIO_000300: 2.759e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.07e0

MQRankSum
type: SiteQuality
SIO_000300: -2.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.419999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.676e0

QD
type: SiteQuality
SIO_000300: 1.534e1

DP
type: SiteQuality
SIO_000300: 2.08432e6

GenotypeDepth
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17130
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5497
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1307
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2567
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 275
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 609
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5951
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 825
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1861
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3309
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5249
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35709
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10017
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2793
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.75e-1

FS
type: SiteQuality
SIO_000300: 1.222e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.267e0

QD
type: SiteQuality
SIO_000300: 1.551e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.65e-1

DP
type: SiteQuality
SIO_000300: 2.083183e6

MQ
type: SiteQuality
SIO_000300: 5.934e1

GenotypeDepth
all individuals: 23334
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 90
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1306
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 378
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1316
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5948
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2566
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 609
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 441
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17113
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2792
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10000
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1859
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3306
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5247
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35622
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.097e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.761e0

DP
type: SiteQuality
SIO_000300: 2.081795e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.989e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.29e-1

QD
type: SiteQuality
SIO_000300: 1.368e1

GenotypeDepth
all individuals: 96
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 378
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2563
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 825
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 17115
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 228
bin: 8.25e1
variant carriers: 2

GenotypeDepth
all individuals: 440
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1305
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 275
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 140
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3305
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9995
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1859
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5244
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 35632
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.601456815816858e-4
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-1

FS
type: SiteQuality
SIO_000300: 6.776e0

MQRankSum
type: SiteQuality
SIO_000300: -1.365e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.34e-1

QD
type: SiteQuality
SIO_000300: 1.738e1

DP
type: SiteQuality
SIO_000300: 2.08148e6

MQ
type: SiteQuality
SIO_000300: 5.657e1

GenotypeDepth
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 378
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1305
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2558
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23266
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1313
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17062
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 138
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 826
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 609
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 440
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1855
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3297
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5237
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 210
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9967
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2778
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35547
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500240038406145e-5
allele num: 66656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.831e0

DP
type: SiteQuality
SIO_000300: 2.079211e6

VQSLOD
type: SiteQuality
SIO_000300: -1.985e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.623e1

FS
type: SiteQuality
SIO_000300: 1.4823e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.09e-1

MQ
type: SiteQuality
SIO_000300: 5.904e1

MQRankSum
type: SiteQuality
SIO_000300: -1.604e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.285e0

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 346
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23102
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5664
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 608
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 440
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2525
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 98
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 228
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5870
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1305
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 824
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1298
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35458
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3245
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2730
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9842
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5205
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.69414014953921e-5
allele num: 11502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16312
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.009e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.018e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

DP
type: SiteQuality
SIO_000300: 2.06981e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.66e-1

GenotypeDepth
all individuals: 824
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16792
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5686
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5860
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2521
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 100
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1305
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 243
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 23073
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5203
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9834
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35464
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3240
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.97e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.81e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.86e-1

DP
type: SiteQuality
SIO_000300: 2.06843e6

QD
type: SiteQuality
SIO_000300: 9.23e0

GenotypeDepth
all individuals: 875
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 360
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 16617
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1294
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 240
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1305
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 608
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34906
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1012
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2687
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3194
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9740
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5192
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 908
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16166
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66454
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.408e1

FS
type: SiteQuality
SIO_000300: 3.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.04e-1

DP
type: SiteQuality
SIO_000300: 2.056472e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.15e-1

GenotypeDepth
all individuals: 304
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1072
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5824
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16550
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 606
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22542
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1305
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3178
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2679
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1176
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34690
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9719
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5188
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 907
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16154
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505479947007106e-5
allele num: 66424
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

DP
type: SiteQuality
SIO_000300: 2.05178e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.351e0

VQSLOD
type: SiteQuality
SIO_000300: -2.228e0

FS
type: SiteQuality
SIO_000300: 2.706e0

QD
type: SiteQuality
SIO_000300: 1.907e1

MQRankSum
type: SiteQuality
SIO_000300: -1.351e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5820
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 395
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1154
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 16527
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1305
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 440
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 606
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1244
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2672
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5187
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9710
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3176
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1779
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34583
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16150
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505479947007106e-5
allele num: 66424
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.349e0

DP
type: SiteQuality
SIO_000300: 2.049953e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

FS
type: SiteQuality
SIO_000300: 1.82e0

VQSLOD
type: SiteQuality
SIO_000300: -1.738e0

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

MQ
type: SiteQuality
SIO_000300: 5.728e1

QD
type: SiteQuality
SIO_000300: 9.25e0

GenotypeDepth
all individuals: 635
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3996
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4863
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5586
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4349
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 818
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1305
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 606
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1273
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8448
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2327
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1441
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4369
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1878
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1001
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2805
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 859
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29070
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5147
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66082
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.29643621710112e-5
allele num: 15882
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.615e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.948482e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.86e0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

VQSLOD
type: SiteQuality
SIO_000300: -5.702e-1

GenotypeDepth
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 640
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4515
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 439
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4461
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1305
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1273
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2446
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 606
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4533
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28457
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2095
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5151
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8393
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1548
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 856
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2309
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1581
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66060
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.339728591483388e-4
allele num: 8548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

FS
type: SiteQuality
SIO_000300: 2.783e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.39e-1

DP
type: SiteQuality
SIO_000300: 1.941121e6

QD
type: SiteQuality
SIO_000300: 1.223e1

MQ
type: SiteQuality
SIO_000300: 5.95e1

MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

GenotypeDepth
all individuals: 818
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4461
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4515
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5573
bin: 3.75e1
variant carriers: 3

GenotypeDepth
all individuals: 93
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1273
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2446
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 640
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2095
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8393
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1548
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4533
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5151
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 213
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28457
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1581
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 856
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2309
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66060
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.50140056022409e-4
allele num: 11424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15890
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.783e0

DP
type: SiteQuality
SIO_000300: 1.941121e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e0

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

QD
type: SiteQuality
SIO_000300: 1.223e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.39e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

GenotypeDepth
all individuals: 5553
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4605
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4563
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 606
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2444
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 95
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 17357
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5166
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1305
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2366
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1578
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8303
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2290
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4693
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1681
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27699
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5144
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 218
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2765
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15868
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513867021920794e-5
allele num: 66056
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

FS
type: SiteQuality
SIO_000300: 2.208e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.259e0

QD
type: SiteQuality
SIO_000300: 7.95e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

VQSLOD
type: SiteQuality
SIO_000300: -8.452e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 1.93245e6

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5761
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4545
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 668
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 818
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5546
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1305
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 606
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26990
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2276
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 856
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2757
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1799
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5144
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2589
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8262
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1576
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1470
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4862
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.301991429291656e-5
allele num: 15868
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66054
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.15e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.44e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.652e1

DP
type: SiteQuality
SIO_000300: 1.924556e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

GenotypeDepth
all individuals: 1271
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 104
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 606
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6301
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 13970
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2440
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16488
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 677
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 197
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8164
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1889
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2249
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1662
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5001
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5144
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 322
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2779
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2718
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26404
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.857280617164899e-4
allele num: 10370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.917545e6

FS
type: SiteQuality
SIO_000300: 1.113e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.583e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.47e-1

QD
type: SiteQuality
SIO_000300: 1.451e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.98e-1

GenotypeDepth
all individuals: 716
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7645
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 606
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4704
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4419
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2436
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1269
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 307
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5205
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2657
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2090
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2186
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3324
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5142
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1536
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7990
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24851
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516714190377965e-5
allele num: 65932
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15820
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.039e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 1.901387e6

MQRankSum
type: SiteQuality
SIO_000300: 8.99e-1

QD
type: SiteQuality
SIO_000300: 1.267e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.425e0

GenotypeDepth
all individuals: 606
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12424
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 307
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4634
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1304
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 818
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5421
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1268
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5400
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2094
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7521
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3906
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5138
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20147
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4768
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2569
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1500
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.353240152477763e-5
allele num: 15740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 6.054e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.857e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.12e-1

DP
type: SiteQuality
SIO_000300: 1.858888e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4742
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 439
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2322
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 127
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10714
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11890
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 196
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 605
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1304
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2627
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4875
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3336
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6497
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1873
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5669
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12565
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4905
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1455
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1399
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5129
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 830
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4647
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.485925541574782e-5
allele num: 15418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.48e0

MQ
type: SiteQuality
SIO_000300: 6.054e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 1.801869e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.278e0

VQSLOD
type: SiteQuality
SIO_000300: -1.638e0

MQRankSum
type: SiteQuality
SIO_000300: -6.19e-1

GenotypeDepth
all individuals: 1393
bin: 2.25e1
variant carriers: 642

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 90
bin: 3.75e1
variant carriers: 76

GenotypeDepth
all individuals: 633
bin: 7.5e0
variant carriers: 154

GenotypeDepth
all individuals: 784
bin: 1.75e1
variant carriers: 669

GenotypeDepth
all individuals: 793
bin: 1.25e1
variant carriers: 359

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 55

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 69

GenotypeQuality
all individuals: 125
bin: 5.25e1
variant carriers: 79

GenotypeQuality
all individuals: 100
bin: 3.75e1
variant carriers: 61

GenotypeQuality
all individuals: 1014
bin: 7.5e0
variant carriers: 44

GenotypeQuality
all individuals: 91
bin: 2.75e1
variant carriers: 31

GenotypeQuality
all individuals: 48
bin: 8.75e1
variant carriers: 44

GenotypeQuality
all individuals: 76
bin: 8.25e1
variant carriers: 58

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 19

GenotypeQuality
all individuals: 608
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 1846
bin: 9.75e1
variant carriers: 1842

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 33

GenotypeQuality
all individuals: 86
bin: 7.25e1
variant carriers: 38

GenotypeQuality
all individuals: 119
bin: 3.25e1
variant carriers: 47

GenotypeQuality
all individuals: 39
bin: 9.25e1
variant carriers: 36

GenotypeQuality
all individuals: 748
bin: 2.25e1
variant carriers: 33

GenotypeQuality
all individuals: 92
bin: 7.75e1
variant carriers: 58

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 28

GenotypeQuality
all individuals: 269
bin: 6.75e1
variant carriers: 54

GenotypeQuality
all individuals: 1459
bin: 6.25e1
variant carriers: 50

Other
type: Population
allele count: 23
allele frequency: 2.3e-1
allele num: 100
num of homozygotes: 2

Latino
type: Population
allele count: 25
allele frequency: 2.840909090909091e-1
allele num: 88
num of homozygotes: 3

East Asian
type: Population
allele count: 6
allele frequency: 4.545454545454546e-2
allele num: 132
num of homozygotes: 0

South Asian
type: Population
allele count: 2249
allele frequency: 3.366766467065868e-1
allele num: 6680
num of homozygotes: 385

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 38
allele frequency: 2.235294117647059e-1
allele num: 170
num of homozygotes: 5

European (Non-Finnish)
type: Population
allele count: 569
allele frequency: 2.402871621621622e-1
allele num: 2368
num of homozygotes: 66

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.83e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

DP
type: SiteQuality
SIO_000300: 1.15014e5

VQSLOD
type: SiteQuality
SIO_000300: 4.35e0

QD
type: SiteQuality
SIO_000300: 1.445e1

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 220
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1323
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1874
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 244
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1137
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1461
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1898
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 78
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.717622810030917e-4
allele num: 5822
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 94
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.85e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.85e0

VQSLOD
type: SiteQuality
SIO_000300: 2.75e0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 1.02098e5

MQ
type: SiteQuality
SIO_000300: 6.054e1

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 321
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 425
bin: 1.75e1
variant carriers: 3

GenotypeDepth
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1955
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1928
bin: 1.25e1
variant carriers: 2

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 145
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 582
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1696
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 323
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3080
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.189141856392294e-4
allele num: 4568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 3.428571428571428e-3
allele num: 1750
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.28e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.06e-2

DP
type: SiteQuality
SIO_000300: 7.5617e4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

QD
type: SiteQuality
SIO_000300: 9.52e0

FS
type: SiteQuality
SIO_000300: 5.933e0

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1715
bin: 1.25e1
variant carriers: 8

GenotypeDepth
all individuals: 63
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 92
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3194
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 261
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2467
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 6.25e1
variant carriers: 1

Latino
type: Population
allele count: 2
allele frequency: 5.0e-2
allele num: 40
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 2.309468822170901e-3
allele num: 2598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 5.1440329218107e-3
allele num: 972
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.74e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: -5.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

QD
type: SiteQuality
SIO_000300: 1.241e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.599e0

FS
type: SiteQuality
SIO_000300: 1.745e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.1749e4

GenotypeDepth
all individuals: 45
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2692
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3210
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2526
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 55
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 956
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 3.878975950349108e-4
allele num: 2578
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.005e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

DP
type: SiteQuality
SIO_000300: 5.0579e4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.754e0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.25e-2

QD
type: SiteQuality
SIO_000300: 8.859999999999999e0

GenotypeDepth
all individuals: 278
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 96
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 323
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9614
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1987
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4309
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12423
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 879
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3581
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2973
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7707
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8357
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 868
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3574
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 380
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.491201908738443e-4
allele num: 6706
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8968
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5844
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.723e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.76e0

DP
type: SiteQuality
SIO_000300: 1.168917e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.653999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.18e-1

QD
type: SiteQuality
SIO_000300: 1.539e1

GenotypeDepth
all individuals: 361
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 278
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3584
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 528
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10046
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18724
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1697
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5662
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4017
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2471
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1743
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7329
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9530
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.797985450475658e-4
allele num: 14296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54810
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.166e0

DP
type: SiteQuality
SIO_000300: 1.222066e6

FS
type: SiteQuality
SIO_000300: 4.186e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.83e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.001e1

MQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e-1

GenotypeDepth
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 227
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4291
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8839
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2945
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28887
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1087
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2542
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3411
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.302226935312831e-5
allele num: 56580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 4.872e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.69e-1

DP
type: SiteQuality
SIO_000300: 1.328579e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.18e-1

QD
type: SiteQuality
SIO_000300: 1.271e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.164e0

GenotypeDepth
all individuals: 227
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1993
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 791
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1251
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41718
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3744
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5242
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1546
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11012
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.100679048711668e-5
allele num: 64502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15760
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.539526e6

MQRankSum
type: SiteQuality
SIO_000300: 4.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.197e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.47e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.066e0

QD
type: SiteQuality
SIO_000300: 1.889e1

GenotypeDepth
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 571
bin: 4.25e1
variant carriers: 2

GenotypeDepth
all individuals: 176
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 227
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1642
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5320
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42220
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3774
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1893
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1315
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.077017754392443e-5
allele num: 64998
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.259287243420224e-4
allele num: 15882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11116
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.275e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.204e1

MQ
type: SiteQuality
SIO_000300: 5.944e1

FS
type: SiteQuality
SIO_000300: 1.067e0

VQSLOD
type: SiteQuality
SIO_000300: 9.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

DP
type: SiteQuality
SIO_000300: 1.553461e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

GenotypeDepth
all individuals: 367
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 278
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 941
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1461
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1952
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5388
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42456
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3801
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1372
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65230
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15948
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.182033096926714e-4
allele num: 8460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11142
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.787000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.558385e6

QD
type: SiteQuality
SIO_000300: 1.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.92e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.264e0

GenotypeDepth
all individuals: 132
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 370
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3202
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3848
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2040
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1443
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43164
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5517
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.172607879924953e-4
allele num: 8528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65854
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.69e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

DP
type: SiteQuality
SIO_000300: 1.573189e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.737e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.95e-1

QD
type: SiteQuality
SIO_000300: 1.76e1

GenotypeDepth
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8632
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3309
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1739
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2082
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5559
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43289
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1481
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3877
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512310205069264e-5
allele num: 66124
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16254
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.259e0

FS
type: SiteQuality
SIO_000300: 1.2616e1

QD
type: SiteQuality
SIO_000300: 2.19e1

VQSLOD
type: SiteQuality
SIO_000300: -1.413e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.51e-1

DP
type: SiteQuality
SIO_000300: 1.581326e6

MQ
type: SiteQuality
SIO_000300: 5.936e1

MQRankSum
type: SiteQuality
SIO_000300: -7.72e-1

GenotypeDepth
all individuals: 378
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 281
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8812
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 163
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 41
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43405
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5626
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1531
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1761
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2134
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3925
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163602513381429e-4
allele num: 8594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507159005275056e-5
allele num: 66350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.159e0

MQRankSum
type: SiteQuality
SIO_000300: -4.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

QD
type: SiteQuality
SIO_000300: 8.470000000000001e0

FS
type: SiteQuality
SIO_000300: 2.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.76e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e-1

DP
type: SiteQuality
SIO_000300: 1.58867e6

GenotypeDepth
all individuals: 230
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 330
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 792
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 98
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43414
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1550
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5641
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2143
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1771
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3943
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.85579332947754e-4
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66374
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.681e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.39e-1

DP
type: SiteQuality
SIO_000300: 1.5902e6

QD
type: SiteQuality
SIO_000300: 1.003e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.84e1

VQSLOD
type: SiteQuality
SIO_000300: 6.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.33e-1

GenotypeDepth
all individuals: 287
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1030
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43373
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3978
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5686
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1791
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

QD
type: SiteQuality
SIO_000300: 1.721e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.595238e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.45e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeDepth
all individuals: 43296
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 792
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 381
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5687
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1582
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3982
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43341
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1792
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2188
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503307276007216e-5
allele num: 66520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.49e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.99e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 1.756e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.52e-1

DP
type: SiteQuality
SIO_000300: 1.595659e6

QD
type: SiteQuality
SIO_000300: 1.219e1

GenotypeDepth
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 792
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1794
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43333
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5690
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3983
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 710
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.791981712678038e-5
allele num: 11374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

DP
type: SiteQuality
SIO_000300: 1.595764e6

MQRankSum
type: SiteQuality
SIO_000300: -5.221e0

MQ
type: SiteQuality
SIO_000300: 5.309e1

VQSLOD
type: SiteQuality
SIO_000300: 2.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 4.41e0

FS
type: SiteQuality
SIO_000300: 7.255e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.064e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

GenotypeDepth
all individuals: 43263
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 613
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43285
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5689
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1792
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3983
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1584
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2186
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503352476021528e-5
allele num: 66518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.847e0

QD
type: SiteQuality
SIO_000300: 1.231e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.76e-1

DP
type: SiteQuality
SIO_000300: 1.596047e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.92e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.78e-1

GenotypeDepth
all individuals: 74
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 97
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 235
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1795
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2192
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5690
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43295
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1586
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3984
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503216884132043e-5
allele num: 66524
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.12e-1

FS
type: SiteQuality
SIO_000300: 1.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e0

MQRankSum
type: SiteQuality
SIO_000300: -5.91e-1

DP
type: SiteQuality
SIO_000300: 1.596351e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.66e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.577e1

GenotypeDepth
all individuals: 2969
bin: 7.25e1
variant carriers: 2914

GenotypeDepth
all individuals: 1506
bin: 8.75e1
variant carriers: 1476

GenotypeDepth
all individuals: 2736
bin: 4.25e1
variant carriers: 2569

GenotypeDepth
all individuals: 3472
bin: 4.75e1
variant carriers: 3369

GenotypeDepth
all individuals: 1214
bin: 9.25e1
variant carriers: 1187

GenotypeDepth
all individuals: 6696
bin: 9.75e1
variant carriers: 6524

GenotypeDepth
all individuals: 2037
bin: 8.25e1
variant carriers: 1995

GenotypeDepth
all individuals: 3603
bin: 6.75e1
variant carriers: 3551

GenotypeQuality
all individuals: 15828
bin: 6.25e1
variant carriers: 39

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 8

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 15

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 25

GenotypeQuality
all individuals: 237
bin: 9.25e1
variant carriers: 140

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 13

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 374
bin: 7.75e1
variant carriers: 75

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 31

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 26

GenotypeQuality
all individuals: 359
bin: 7.25e1
variant carriers: 66

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 159
bin: 8.75e1
variant carriers: 75

GenotypeQuality
all individuals: 49
bin: 7.5e0
variant carriers: 10

GenotypeQuality
all individuals: 41664
bin: 9.75e1
variant carriers: 40834

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 18

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 25

GenotypeQuality
all individuals: 280
bin: 8.25e1
variant carriers: 96

GenotypeQuality
all individuals: 92
bin: 2.25e1
variant carriers: 13

GenotypeQuality
all individuals: 1248
bin: 6.75e1
variant carriers: 53

South Asian
type: Population
allele count: 5442
allele frequency: 3.301783764106298e-1
allele num: 16482
num of homozygotes: 962

European (Finnish)
type: Population
allele count: 3210
allele frequency: 4.887332521315469e-1
allele num: 6568
num of homozygotes: 790

Other
type: Population
allele count: 421
allele frequency: 4.636563876651982e-1
allele num: 908
num of homozygotes: 101

African
type: Population
allele count: 5677
allele frequency: 5.456555171088043e-1
allele num: 10404
num of homozygotes: 1524

European (Non-Finnish)
type: Population
allele count: 30785
allele frequency: 4.624733347354505e-1
allele num: 66566
num of homozygotes: 7220

Latino
type: Population
allele count: 3898
allele frequency: 3.421699438202247e-1
allele num: 11392
num of homozygotes: 700

East Asian
type: Population
allele count: 4574
allele frequency: 5.303803339517625e-1
allele num: 8624
num of homozygotes: 1200

VQSLOD
type: SiteQuality
SIO_000300: 5.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

QD
type: SiteQuality
SIO_000300: 1.839e1

DP
type: SiteQuality
SIO_000300: 3.507806e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.78e-2

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.91e-1

GenotypeDepth
all individuals: 173
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 701
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 433
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8829
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1981
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1692
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3935
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43452
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6941
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.078288353999514e-5
allele num: 16452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.192e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

QD
type: SiteQuality
SIO_000300: 2.19e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.965999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.766465e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-2

GenotypeDepth
all individuals: 182
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 223
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 358
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 701
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1055
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1679
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3925
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 463
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 43454
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6927
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158748551564311e-4
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.765832e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.351e0

QD
type: SiteQuality
SIO_000300: 6.96e0

MQRankSum
type: SiteQuality
SIO_000300: 5.49e-1

FS
type: SiteQuality
SIO_000300: 2.35e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: -2.183e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeDepth
all individuals: 357
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20598
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1051
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3919
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6933
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43483
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1960
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1679
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.079766536964981e-5
allele num: 16448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66534
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.32e-1

QD
type: SiteQuality
SIO_000300: 2.272e1

DP
type: SiteQuality
SIO_000300: 1.765219e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: 7.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 3.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.284e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.11e-1

GenotypeDepth
all individuals: 434
bin: 5.25e1
variant carriers: 8

GenotypeDepth
all individuals: 701
bin: 9.75e1
variant carriers: 14

GenotypeDepth
all individuals: 122
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8788
bin: 3.25e1
variant carriers: 4

GenotypeDepth
all individuals: 117
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 257
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3927
bin: 9.75e1
variant carriers: 66

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1679
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6932
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1958
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43522
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1049
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 64
allele frequency: 6.152662949432801e-3
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66538
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.757778168395148e-4
allele num: 11378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

DP
type: SiteQuality
SIO_000300: 1.765051e6

VQSLOD
type: SiteQuality
SIO_000300: 6.07e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.45e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

GenotypeDepth
all individuals: 20627
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 168
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 241
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2036
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1673
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6929
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1944
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43507
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3858
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 452
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.823e0

DP
type: SiteQuality
SIO_000300: 1.760528e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.24e-1

QD
type: SiteQuality
SIO_000300: 2.019e1

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

FS
type: SiteQuality
SIO_000300: 1.322e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeDepth
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 116
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 237
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 353
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1673
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43557
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1946
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6934
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3851
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.399e1

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.488e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.09e-1

FS
type: SiteQuality
SIO_000300: 5.483e0

DP
type: SiteQuality
SIO_000300: 1.760207e6

VQSLOD
type: SiteQuality
SIO_000300: -1.968e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.08e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

GenotypeDepth
all individuals: 191
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 168
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 215
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43492
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1013
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6910
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1922
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3844
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1652
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.759324419422942e-4
allele num: 11368
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21713729308666e-4
allele num: 16432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504257047444267e-5
allele num: 66478
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 1.751e0

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.42e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.39e-1

DP
type: SiteQuality
SIO_000300: 1.758975e6

GenotypeDepth
all individuals: 695
bin: 9.75e1
variant carriers: 90

GenotypeDepth
all individuals: 278
bin: 6.25e1
variant carriers: 21

GenotypeDepth
all individuals: 578
bin: 4.75e1
variant carriers: 20

GenotypeDepth
all individuals: 133
bin: 9.25e1
variant carriers: 12

GenotypeDepth
all individuals: 179
bin: 8.25e1
variant carriers: 18

GenotypeQuality
all individuals: 6915
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1647
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43574
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3862
bin: 9.75e1
variant carriers: 326

GenotypeQuality
all individuals: 550
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1008
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 297
allele frequency: 2.856868026163909e-2
allele num: 10396
num of homozygotes: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.406666466111128e-4
allele num: 66482
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.087168249330411e-5
allele num: 16428
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 1.231527093596059e-3
allele num: 11368
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 5.29e0

DP
type: SiteQuality
SIO_000300: 1.759381e6

MQRankSum
type: SiteQuality
SIO_000300: 3.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.28e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.25e-2

QD
type: SiteQuality
SIO_000300: 1.381e1

GenotypeDepth
all individuals: 322
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 123
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 216
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1651
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43756
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6941
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3568
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1911
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66448
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.088650754992694e-5
allele num: 16424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.08e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

QD
type: SiteQuality
SIO_000300: 1.604e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.079e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.76e-1

DP
type: SiteQuality
SIO_000300: 1.7408e6

GenotypeDepth
all individuals: 160
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 400
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 321
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 124
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 621
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1644
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43663
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3581
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1896
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6909
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 17
allele frequency: 1.035575048732943e-3
allele num: 16416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.526946468356717e-5
allele num: 66428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.740061e6

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.068e0

MQRankSum
type: SiteQuality
SIO_000300: -1.84e-1

FS
type: SiteQuality
SIO_000300: 1.132e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.99e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

QD
type: SiteQuality
SIO_000300: 1.256e1

GenotypeDepth
all individuals: 216
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8710
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 321
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 400
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 152
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43663
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6909
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3581
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1644
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1896
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505389293671343e-5
allele num: 66428
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.99e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.132e0

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

DP
type: SiteQuality
SIO_000300: 1.740061e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.068e0

MQRankSum
type: SiteQuality
SIO_000300: -1.84e-1

QD
type: SiteQuality
SIO_000300: 1.256e1

GenotypeDepth
all individuals: 258
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 199
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 123
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43743
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1642
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3556
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1895
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6917
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.091617933723197e-5
allele num: 16416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.437e0