8-110539196-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110539196
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110539196
    reference: chr 8
allele count: 6
allele frequency: 5.081645097906363e-5
allele num: 118072
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000205038
  ensembl transcript: ENST00000534623
  gene symbol: PKHD1L1
  hgvsc: ENST00000534623.1:n.406T>G
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3452T>G
  hgvsp: ENSP00000437376.1:p.Met1151Arg
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12668T>G
  hgvsp: ENSP00000367655.5:p.Met4223Arg
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4905
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20159
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28528
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2905
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1955
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4671
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46783
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Met4223Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

8-110539200-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110539200
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110539200
    reference: chr 8
allele count: 1
allele frequency: 8.490117503226245e-6
allele num: 117784
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12672G>C
  hgvsp: ENSP00000367655.5:p.Trp4224Cys
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000205038
  ensembl transcript: ENST00000534623
  gene symbol: PKHD1L1
  hgvsc: ENST00000534623.1:n.410G>C
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3456G>C
  hgvsp: ENSP00000437376.1:p.Trp1152Cys
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4621
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46642
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2892
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Trp4224Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

8-110539201-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110539201
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110539201
    reference: chr 8
allele count: 78
allele frequency: 6.627017841971114e-4
allele num: 117700
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000205038
  ensembl transcript: ENST00000534623
  gene symbol: PKHD1L1
  hgvsc: ENST00000534623.1:n.411C>G
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12673C>G
  hgvsp: ENSP00000367655.5:p.Leu4225Val
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3457C>G
  hgvsp: ENSP00000437376.1:p.Leu1153Val
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20132
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 28178
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2295
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2955
  bin: 9.75e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4601
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu4225Val
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

8-110539208-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110539208
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110539208
    reference: chr 8
allele count: 1
allele frequency: 8.568539749455898e-6
allele num: 116706
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12680A>G
  hgvsp: ENSP00000367655.5:p.Glu4227Gly
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3464A>G
  hgvsp: ENSP00000437376.1:p.Glu1155Gly
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000205038
  ensembl transcript: ENST00000534623
  gene symbol: PKHD1L1
  hgvsc: ENST00000534623.1:n.418A>G
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4504
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45813
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3219
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2866
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu4227Gly
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

8-110539209-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110539209
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110539209
    reference: chr 8
allele count: 1
allele frequency: 8.583396278239373e-6
allele num: 116504
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12681A>G
  hgvsp: ENST00000378402.5:c.12681A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000205038
  ensembl transcript: ENST00000534623
  gene symbol: PKHD1L1
  hgvsc: ENST00000534623.1:n.419A>G
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3465A>G
  hgvsp: ENST00000526472.1:c.3465A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27344
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3398
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4495
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2866
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45578
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu4227Glu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

8-110539223-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110539223
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110539223
    reference: chr 8
allele count: 8
allele frequency: 7.212925562608193e-5
allele num: 110912
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000205038
  ensembl transcript: ENST00000534623
  gene symbol: PKHD1L1
  hgvsc: ENST00000534623.1:n.433C>G
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3479C>G
  hgvsp: ENSP00000437376.1:p.Ala1160Gly
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12695C>G
  hgvsp: ENSP00000367655.5:p.Ala4232Gly
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 4696
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40067
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2765
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8215
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala4232Gly
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

8-110539235-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110539235
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110539235
    reference: chr 8
allele count: 10
allele frequency: 9.834002045472426e-5
allele num: 101688
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000205038
  ensembl transcript: ENST00000534623
  gene symbol: PKHD1L1
  hgvsc: ENST00000534623.1:n.445T>C
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3491T>C
  hgvsp: ENSP00000437376.1:p.Leu1164Ser
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12707T>C
  hgvsp: ENSP00000367655.5:p.Leu4236Ser
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14426
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17491
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17070
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30085
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2835
  bin: 9.75e1
  variant carriers: 10
hgvs: p.Leu4236Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

8-110539241-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110539241
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110539241
    reference: chr 8
allele count: 1
allele frequency: 1.064373297002725e-5
allele num: 93952
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3497T>C
  hgvsp: ENSP00000437376.1:p.Ile1166Thr
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12713T>C
  hgvsp: ENSP00000367655.5:p.Ile4238Thr
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000205038
  ensembl transcript: ENST00000534623
  gene symbol: PKHD1L1
  hgvsc: ENST00000534623.1:n.451T>C
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12601
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24067
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2827
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2349
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2267
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21221
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile4238Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

8-110539244-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110539244
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110539245
    reference: chr 8
allele count: 1
allele frequency: 1.067896883876893e-5
allele num: 93642
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3503dupT
  hgvsp: ENSP00000437376.1:p.Leu1168PhefsTer12
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000205038
  ensembl transcript: ENST00000534623
  gene symbol: PKHD1L1
  hgvsc: ENST00000534623.1:n.457dupT
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12719dupT
  hgvsp: ENSP00000367655.5:p.Leu4240PhefsTer12
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10918
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22347
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2330
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1875
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2825
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2195
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24288
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu4240PhefsTer12
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

8-110539255-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110539255
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110539255
    reference: chr 8
allele count: 1
allele frequency: 1.228833345621667e-5
allele num: 81378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000205038
  ensembl transcript: ENST00000534623
  gene symbol: PKHD1L1
  hgvsc: ENST00000534623.1:n.465T>A
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12721+6T>A
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3505+6T>A
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21748
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17010
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3265
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2825
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2316
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9751
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1160
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3690
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 9.25e1
  variant carriers: 0
hgvs: c.12721+6T>A
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
reference allele: T
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

8-110539257-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110539257
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110539257
    reference: chr 8
allele count: 2
allele frequency: 2.468952917067872e-5
allele num: 81006
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3505+8C>T
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12721+8C>T
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21688
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3643
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
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  variant carriers: 0
hgvs: c.12721+8C>T
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7292
  num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/8-110539270-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110539270
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110539270
    reference: chr 8
allele count: 1
allele frequency: 1.433815095205322e-5
allele num: 69744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3505+21C>A
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12721+21C>A
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22536
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3980
  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 239
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4536
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9650
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

8-110539272-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110539272
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110539272
    reference: chr 8
allele count: 3
allele frequency: 4.324636009802508e-5
allele num: 69370
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3505+23T>C
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12721+23T>C
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5981
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 4036
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30972
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1511
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4372
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1616
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4507
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 2824
  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 324
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 2
  allele frequency: 2.079866888519135e-4
  allele num: 9616
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

8-110539296-CAGTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110539296
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110539292
    reference: chr 8
allele count: 1
allele frequency: 2.057443831783392e-5
allele num: 48604
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3505+48_3505+51delAGTG
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12721+48_12721+51delAGTG
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8543
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 14627
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2823
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4199
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 9892
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 6134
  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 321
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genotype quality: GenotypeQuality
  all individuals: 8210
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genotype quality: GenotypeQuality
  all individuals: 283
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 583
  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 334
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genotype quality: GenotypeQuality
  all individuals: 3889
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 151
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 27274
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: CAGTG
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS

http://identifiers.org/exac.variant/8-110542260-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110542260
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110542260
    reference: chr 8
allele count: 1
allele frequency: 5.179736869367036e-5
allele num: 19306
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3506-49A>C
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12722-49A>C
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 2.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4716
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 192
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

8-110542271-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110542271
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110542271
    reference: chr 8
allele count: 1
allele frequency: 5.149330587023687e-5
allele num: 19420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3506-38C>T
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12722-38C>T
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
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  variant carriers: 0
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  all individuals: 84
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7340
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 916
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 202
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 894
  num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

8-110542298-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110542298
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110542298
    reference: chr 8
allele count: 3889
allele frequency: 1.903945951238618e-1
allele num: 20426
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.3506-11C>T
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.12722-11C>T
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 2.25e1
  variant carriers: 351
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.5e0
  variant carriers: 127
genotype depth: GenotypeDepth
  all individuals: 122
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genotype depth: GenotypeDepth
  all individuals: 623
  bin: 1.25e1
  variant carriers: 246
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 8444
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  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 3.25e1
  variant carriers: 414
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.75e1
  variant carriers: 380
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 435
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 359
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 557
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  variant carriers: 263
genotype quality: GenotypeQuality
  all individuals: 6880
  bin: 7.5e0
  variant carriers: 67
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
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  variant carriers: 45
genotype quality: GenotypeQuality
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  variant carriers: 36
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 450
  bin: 7.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 2.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 6.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 7.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 9.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 8.75e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 2391
  bin: 6.25e1
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 4816
  bin: 9.75e1
  variant carriers: 2962
num of homozygotes: 425
population: European (Finnish)
  type: Population
  allele count: 196
  allele frequency: 1.791590493601463e-1
  allele num: 1094
  num of homozygotes: 11
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

8-110542324-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110542324
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110542324
    reference: chr 8
allele count: 5
allele frequency: 2.440452948067161e-4
allele num: 20488
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.*5C>G
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.*5C>G
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9826
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8929
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3055
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2673
  bin: 9.75e1
  variant carriers: 4
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 5
  allele frequency: 6.403688524590163e-4
  allele num: 7808
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

8-110542330-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110542330
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110542330
    reference: chr 8
allele count: 9
allele frequency: 4.435245416913069e-4
allele num: 20292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.*11C>T
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.*11C>T
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9830
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8658
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2788
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2676
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8294
  num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

8-110542331-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110542331
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110542331
    reference: chr 8
allele count: 5
allele frequency: 2.47133254250692e-4
allele num: 20232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.*12G>A
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.*12G>A
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9864
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8645
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1474
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2673
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2739
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1114
  num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

8-110542337-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110542337
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110542337
    reference: chr 8
allele count: 3816
allele frequency: 1.86419149975574e-1
allele num: 20470
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.*18T>C
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.*18T>C
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 226
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 2.5e0
  variant carriers: 172
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 2.25e1
  variant carriers: 366
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 7.5e0
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 1.75e1
  variant carriers: 323
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 3.25e1
  variant carriers: 422
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 1.25e1
  variant carriers: 288
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 145
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.75e1
  variant carriers: 320
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 2.75e1
  variant carriers: 345
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 9.75e1
  variant carriers: 504
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.25e1
  variant carriers: 109
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 8.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 7.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 4976
  bin: 9.75e1
  variant carriers: 3122
genotype quality: GenotypeQuality
  all individuals: 8009
  bin: 7.5e0
  variant carriers: 106
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 2171
  bin: 6.25e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 8.25e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 2.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 6.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 7.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 9.25e1
  variant carriers: 36
num of homozygotes: 404
population: South Asian
  type: Population
  allele count: 1335
  allele frequency: 1.718589083419156e-1
  allele num: 7768
  num of homozygotes: 129
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

8-110542343-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110542343
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110542344
    reference: chr 8
allele count: 3781
allele frequency: 1.852704821638573e-1
allele num: 20408
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.*27dupA
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.*27dupA
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 3.75e1
  variant carriers: 286
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 3.25e1
  variant carriers: 396
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.25e1
  variant carriers: 196
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 7.5e0
  variant carriers: 189
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 2.75e1
  variant carriers: 391
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.75e1
  variant carriers: 355
genotype depth: GenotypeDepth
  all individuals: 10149
  bin: 2.5e0
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 2.25e1
  variant carriers: 386
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 9.75e1
  variant carriers: 476
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 142
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 1.25e1
  variant carriers: 311
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 3.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 9.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 7803
  bin: 7.5e0
  variant carriers: 105
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 6.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 7.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.25e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 7.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 6.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 4954
  bin: 9.75e1
  variant carriers: 3101
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 8.25e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 8.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 2.25e1
  variant carriers: 27
num of homozygotes: 399
population: Latino
  type: Population
  allele count: 151
  allele frequency: 3.700980392156863e-1
  allele num: 408
  num of homozygotes: 32
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

8-110542364-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110542364
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110542364
    reference: chr 8
allele count: 1
allele frequency: 4.947066389630949e-5
allele num: 20214
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000367655
  ensembl transcript: ENST00000378402
  gene symbol: PKHD1L1
  hgvsc: ENST00000378402.5:c.*45T>A
  variant of: http://identifiers.org/hgnc/20313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000205038
  ensembl protein: ENSP00000437376
  ensembl transcript: ENST00000526472
  gene symbol: PKHD1L1
  hgvsc: ENST00000526472.1:c.*45T>A
  variant of: http://identifiers.org/hgnc/20313
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11048
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5240
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2723
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1741
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5818
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1966
  num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

8-110563010-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563010
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563010
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 49668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-3084G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.-44G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.-15-29G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.-15-29G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.-15-29G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.162-29G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.-15-29G>T
  variant of: http://identifiers.org/hgnc/3123
canonical: false
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25172
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9973
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4207
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18915
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3095
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4579
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

8-110563035-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563035
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563035
    reference: chr 8
allele count: 1
allele frequency: 1.795203217004165e-5
allele num: 55704
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.-15-4A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.-15-4A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.-15-4A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.-15-4A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.162-4A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.-19A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-3059A>G
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2970
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10455
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3928
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2468
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2616
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27806
  bin: 2.25e1
  variant carriers: 0
hgvs: c.-15-4A>G
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

8-110563060-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563060
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563060
    reference: chr 8
allele count: 1
allele frequency: 1.507113576079093e-5
allele num: 66352
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.7A>G
  hgvsp: ENSP00000432082.1:p.Ile3Val
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.7A>G
  hgvsp: ENSP00000379131.2:p.Ile3Val
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.7A>G
  hgvsp: ENSP00000435689.1:p.Ile3Val
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.7A>G
  hgvsp: ENSP00000434878.1:p.Ile3Val
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.7A>G
  hgvsp: ENSP00000337675.5:p.Ile3Val
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-3034A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.7A>G
  hgvsp: ENSP00000437214.1:p.Ile3Val
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.183A>G
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15899
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26538
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile3Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

8-110563064-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563064
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563064
    reference: chr 8
allele count: 3
allele frequency: 4.478414044306443e-5
allele num: 66988
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.11C>T
  hgvsp: ENSP00000437214.1:p.Thr4Ile
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.187C>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.11C>T
  hgvsp: ENSP00000434878.1:p.Thr4Ile
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.11C>T
  hgvsp: ENSP00000432082.1:p.Thr4Ile
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.11C>T
  hgvsp: ENSP00000379131.2:p.Thr4Ile
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.11C>T
  hgvsp: ENSP00000435689.1:p.Thr4Ile
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.11C>T
  hgvsp: ENSP00000337675.5:p.Thr4Ile
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-3030C>T
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24903
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18345
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4513
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1395
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr4Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD

8-110563072-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563072
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563072
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 67286
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.19C>T
  hgvsp: ENSP00000337675.5:p.Arg7Trp
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.19C>T
  hgvsp: ENSP00000437214.1:p.Arg7Trp
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.195C>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.19C>T
  hgvsp: ENSP00000379131.2:p.Arg7Trp
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.19C>T
  hgvsp: ENSP00000432082.1:p.Arg7Trp
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.19C>T
  hgvsp: ENSP00000435689.1:p.Arg7Trp
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.19C>T
  hgvsp: ENSP00000434878.1:p.Arg7Trp
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-3022C>T
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4664
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24694
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26600
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg7Trp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

8-110563073-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563073
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563073
    reference: chr 8
allele count: 2
allele frequency: 2.972033167890154e-5
allele num: 67294
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.20G>A
  hgvsp: ENSP00000432082.1:p.Arg7Gln
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.20G>A
  hgvsp: ENSP00000379131.2:p.Arg7Gln
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.20G>A
  hgvsp: ENSP00000437214.1:p.Arg7Gln
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.20G>A
  hgvsp: ENSP00000434878.1:p.Arg7Gln
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.20G>A
  hgvsp: ENSP00000337675.5:p.Arg7Gln
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.20G>A
  hgvsp: ENSP00000435689.1:p.Arg7Gln
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.196G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-3021G>A
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24679
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4710
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4512
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg7Gln
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

8-110563074-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563074
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563074
    reference: chr 8
allele count: 1
allele frequency: 1.483987771940759e-5
allele num: 67386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.21G>T
  hgvsp: ENST00000534318.1:c.21G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.21G>T
  hgvsp: ENST00000395785.2:c.21G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.21G>T
  hgvsp: ENST00000337573.5:c.21G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-3020G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.21G>T
  hgvsp: ENST00000527709.1:c.21G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.21G>T
  hgvsp: ENST00000531677.1:c.21G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.197G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.21G>T
  hgvsp: ENST00000530629.1:c.21G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15722
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4779
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24704
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26821
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg7Arg
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

8-110563075-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563075
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563075
    reference: chr 8
allele count: 1
allele frequency: 1.491958344523021e-5
allele num: 67026
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-3019T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.22T>C
  hgvsp: ENST00000531677.1:c.22T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.22T>C
  hgvsp: ENST00000395785.2:c.22T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.22T>C
  hgvsp: ENST00000337573.5:c.22T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.22T>C
  hgvsp: ENST00000527709.1:c.22T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.22T>C
  hgvsp: ENST00000530629.1:c.22T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.22T>C
  hgvsp: ENST00000534318.1:c.22T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.198T>C
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24824
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2129
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17078
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu8Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/8-110563082-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563082
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563082
    reference: chr 8
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.29A>C
  hgvsp: ENSP00000435689.1:p.Lys10Thr
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.29A>C
  hgvsp: ENSP00000437214.1:p.Lys10Thr
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.29A>C
  hgvsp: ENSP00000337675.5:p.Lys10Thr
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.29A>C
  hgvsp: ENSP00000434878.1:p.Lys10Thr
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.205A>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.29A>C
  hgvsp: ENSP00000379131.2:p.Lys10Thr
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.29A>C
  hgvsp: ENSP00000432082.1:p.Lys10Thr
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-3012A>C
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24976
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5307
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Lys10Thr
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

8-110563083-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563083
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563083
    reference: chr 8
allele count: 1
allele frequency: 1.502087902184036e-5
allele num: 66574
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.30A>G
  hgvsp: ENST00000534318.1:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-3011A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.30A>G
  hgvsp: ENST00000527709.1:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.30A>G
  hgvsp: ENST00000531677.1:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.30A>G
  hgvsp: ENST00000395785.2:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.30A>G
  hgvsp: ENST00000530629.1:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.30A>G
  hgvsp: ENST00000337573.5:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.206A>G
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5389
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27892
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17367
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys10Lys
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: A
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

8-110563098-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563098
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563098
    reference: chr 8
allele count: 1
allele frequency: 1.634895203217474e-5
allele num: 61166
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-2996A>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.45A>T
  hgvsp: ENST00000531677.1:c.45A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.45A>T
  hgvsp: ENST00000530629.1:c.45A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.221A>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.45A>T
  hgvsp: ENST00000534318.1:c.45A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.45A>T
  hgvsp: ENST00000527709.1:c.45A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.45A>T
  hgvsp: ENST00000395785.2:c.45A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.45A>T
  hgvsp: ENST00000337573.5:c.45A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26335
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12226
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu15Leu
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

8-110563131-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563131
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563131
    reference: chr 8
allele count: 1
allele frequency: 2.240243738518751e-5
allele num: 44638
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.78A>G
  hgvsp: ENSP00000432082.1:p.Ile26Met
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.78A>G
  hgvsp: ENSP00000437214.1:p.Ile26Met
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.78A>G
  hgvsp: ENSP00000435689.1:p.Ile26Met
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.78A>G
  hgvsp: ENSP00000337675.5:p.Ile26Met
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.78A>G
  hgvsp: ENSP00000379131.2:p.Ile26Met
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.78A>G
  hgvsp: ENSP00000434878.1:p.Ile26Met
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.254A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-2963A>G
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23617
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13787
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9695
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2653
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4509
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ile26Met
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

8-110563135-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563135
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563135
    reference: chr 8
allele count: 1
allele frequency: 2.336666978222264e-5
allele num: 42796
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.82A>G
  hgvsp: ENSP00000379131.2:p.Arg28Gly
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.82A>G
  hgvsp: ENSP00000437214.1:p.Arg28Gly
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.82A>G
  hgvsp: ENSP00000337675.5:p.Arg28Gly
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.82A>G
  hgvsp: ENSP00000432082.1:p.Arg28Gly
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.82A>G
  hgvsp: ENSP00000434878.1:p.Arg28Gly
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.258A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.82A>G
  hgvsp: ENSP00000435689.1:p.Arg28Gly
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-2959A>G
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22924
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15331
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26551
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3627
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg28Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

8-110563150-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563150
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563150
    reference: chr 8
allele count: 2
allele frequency: 5.699954400364797e-5
allele num: 35088
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-2944A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.83+14A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.83+14A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.259+14A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.83+14A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.83+14A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.83+14A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.83+14A>G
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22852
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6235
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18918
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1973
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1874
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4510
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/8-110563157-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563157
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563157
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 32028
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.259+21A>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.83+21A>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.83+21A>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.83+21A>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.83+21A>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.83+21A>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-2937A>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.83+21A>C
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25923
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16608
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25857
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1177
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4506
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2547
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2516
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

8-110563162-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563162
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563162
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 30136
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-2932A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.83+26A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.83+26A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.83+26A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.259+26A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.83+26A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.83+26A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.83+26A>G
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 27652
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15210
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27206
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4506
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

8-110563170-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563170
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563170
    reference: chr 8
allele count: 11
allele frequency: 3.986084939846355e-4
allele num: 27596
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.83+34A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.83+34A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.83+34A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.83+34A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.83+34A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.259+34A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-2924A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.83+34A>G
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13633
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4506
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2282
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7943
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ

8-110563178-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110563178
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110563178
    reference: chr 8
allele count: 1
allele frequency: 3.930817610062893e-5
allele num: 25440
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.83+42G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-2916G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.83+42G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.259+42G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.83+42G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.83+42G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.83+42G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.83+42G>A
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29658
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5257
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25596
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

8-110566059-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566059
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566059
    reference: chr 8
allele count: 1
allele frequency: 8.343206127250579e-6
allele num: 119858
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.84-35G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.84-35G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.260-35G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.84-35G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.84-35G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-35G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.84-35G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.84-35G>A
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16174
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26874
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7789
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

8-110566059-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566059
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566059
    reference: chr 8
allele count: 1
allele frequency: 8.343206127250579e-6
allele num: 119858
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.84-35G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.84-35G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-35G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.260-35G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.84-35G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.84-35G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.84-35G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.84-35G>C
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16174
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8539
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9364
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3378
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff

8-110566060-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566060
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566060
    reference: chr 8
allele count: 1
allele frequency: 8.340700952508049e-6
allele num: 119894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.84-34G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.84-34G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.84-34G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.84-34G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-34G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.84-34G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.84-34G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.260-34G>A
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16255
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27346
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

8-110566060-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566060
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566060
    reference: chr 8
allele count: 3
allele frequency: 2.502210285752415e-5
allele num: 119894
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.84-34G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.84-34G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.84-34G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.260-34G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.84-34G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-34G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.84-34G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.84-34G>T
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16255
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8571
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9369
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7826
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

8-110566067-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566067
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566067
    reference: chr 8
allele count: 1
allele frequency: 8.320159747067144e-6
allele num: 120190
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.84-27A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.260-27A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.84-27A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.84-27A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.84-27A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.84-27A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.84-27A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-27A>G
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3647
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29393
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9374
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3440
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2689
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

8-110566073-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566073
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566073
    reference: chr 8
allele count: 3
allele frequency: 2.491321895397698e-5
allele num: 120418
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.84-21A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.84-21A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.84-21A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.260-21A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.84-21A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-21A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.84-21A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.84-21A>G
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2700
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2408
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1517
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7999
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

8-110566093-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566093
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566093
    reference: chr 8
allele count: 1
allele frequency: 8.274036074797286e-6
allele num: 120860
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.84-1G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.84-1G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.84-1G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-208-1G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.260-1G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.84-1G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.84-1G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.84-1G>C
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31474
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8079
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 2.25e1
  variant carriers: 0
hgvs: c.84-1G>C
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum

8-110566103-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566103
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566103
    reference: chr 8
allele count: 1
allele frequency: 8.268152729317216e-6
allele num: 120946
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.93A>G
  hgvsp: ENST00000527709.1:c.93A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.93A>G
  hgvsp: ENST00000534318.1:c.93A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.93A>G
  hgvsp: ENST00000395785.2:c.93A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.93A>G
  hgvsp: ENST00000337573.5:c.93A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.269A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.93A>G
  hgvsp: ENST00000530629.1:c.93A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.93A>G
  hgvsp: ENST00000531677.1:c.93A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-199A>G
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8118
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2722
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1521
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3478
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg31Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

8-110566105-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566105
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566105
    reference: chr 8
allele count: 1
allele frequency: 8.267605866693123e-6
allele num: 120954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.95G>A
  hgvsp: ENSP00000379131.2:p.Gly32Glu
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.95G>A
  hgvsp: ENSP00000432082.1:p.Gly32Glu
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-197G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.95G>A
  hgvsp: ENSP00000434878.1:p.Gly32Glu
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.95G>A
  hgvsp: ENSP00000435689.1:p.Gly32Glu
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.271G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.95G>A
  hgvsp: ENSP00000337675.5:p.Gly32Glu
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.95G>A
  hgvsp: ENSP00000437214.1:p.Gly32Glu
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21018
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2721
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly32Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

8-110566107-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566107
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566107
    reference: chr 8
allele count: 4
allele frequency: 3.306714283352347e-5
allele num: 120966
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.273C>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.97C>T
  hgvsp: ENSP00000434878.1:p.Arg33Trp
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-195C>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.97C>T
  hgvsp: ENSP00000435689.1:p.Arg33Trp
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.97C>T
  hgvsp: ENSP00000437214.1:p.Arg33Trp
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.97C>T
  hgvsp: ENSP00000379131.2:p.Arg33Trp
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.97C>T
  hgvsp: ENSP00000432082.1:p.Arg33Trp
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.97C>T
  hgvsp: ENSP00000337675.5:p.Arg33Trp
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31601
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg33Trp
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

8-110566108-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566108
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566108
    reference: chr 8
allele count: 1
allele frequency: 8.266922390132602e-6
allele num: 120964
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-194G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.98G>A
  hgvsp: ENSP00000379131.2:p.Arg33Gln
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.98G>A
  hgvsp: ENSP00000434878.1:p.Arg33Gln
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.98G>A
  hgvsp: ENSP00000437214.1:p.Arg33Gln
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.98G>A
  hgvsp: ENSP00000337675.5:p.Arg33Gln
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.98G>A
  hgvsp: ENSP00000435689.1:p.Arg33Gln
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.98G>A
  hgvsp: ENSP00000432082.1:p.Arg33Gln
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.274G>A
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg33Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

8-110566124-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566124
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566124
    reference: chr 8
allele count: 2
allele frequency: 1.652810604432838e-5
allele num: 121006
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.114C>T
  hgvsp: ENST00000531677.1:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.114C>T
  hgvsp: ENST00000530629.1:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.114C>T
  hgvsp: ENST00000395785.2:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.114C>T
  hgvsp: ENST00000337573.5:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.290C>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.114C>T
  hgvsp: ENST00000534318.1:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.114C>T
  hgvsp: ENST00000527709.1:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-178C>T
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp38Asp
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

8-110566128-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566128
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566128
    reference: chr 8
allele count: 1
allele frequency: 8.263916435277007e-6
allele num: 121008
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.118A>G
  hgvsp: ENSP00000337675.5:p.Ile40Val
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.118A>G
  hgvsp: ENSP00000434878.1:p.Ile40Val
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.294A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.118A>G
  hgvsp: ENSP00000379131.2:p.Ile40Val
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.118A>G
  hgvsp: ENSP00000437214.1:p.Ile40Val
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-174A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.118A>G
  hgvsp: ENSP00000432082.1:p.Ile40Val
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.118A>G
  hgvsp: ENSP00000435689.1:p.Ile40Val
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8943
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3467
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile40Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

8-110566140-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566140
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566140
    reference: chr 8
allele count: 1
allele frequency: 8.26801600687899e-6
allele num: 120948
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.130A>G
  hgvsp: ENSP00000379131.2:p.Thr44Ala
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.130A>G
  hgvsp: ENSP00000434878.1:p.Thr44Ala
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.306A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.130A>G
  hgvsp: ENSP00000432082.1:p.Thr44Ala
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.130A>G
  hgvsp: ENSP00000437214.1:p.Thr44Ala
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.130A>G
  hgvsp: ENSP00000435689.1:p.Thr44Ala
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.130A>G
  hgvsp: ENSP00000337675.5:p.Thr44Ala
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-162A>G
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17838
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9375
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr44Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

8-110566143-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566143
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566143
    reference: chr 8
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.133A>G
  hgvsp: ENSP00000379131.2:p.Thr45Ala
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.309A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.133A>G
  hgvsp: ENSP00000435689.1:p.Thr45Ala
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.133A>G
  hgvsp: ENSP00000437214.1:p.Thr45Ala
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.133A>G
  hgvsp: ENSP00000434878.1:p.Thr45Ala
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-159A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.133A>G
  hgvsp: ENSP00000337675.5:p.Thr45Ala
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.133A>G
  hgvsp: ENSP00000432082.1:p.Thr45Ala
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31361
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr45Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

8-110566157-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566157
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566157
    reference: chr 8
allele count: 2
allele frequency: 1.657385308936622e-5
allele num: 120672
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.147A>T
  hgvsp: ENST00000530629.1:c.147A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.323A>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.147A>T
  hgvsp: ENST00000534318.1:c.147A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-145A>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.147A>T
  hgvsp: ENST00000395785.2:c.147A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.147A>T
  hgvsp: ENST00000337573.5:c.147A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.147A>T
  hgvsp: ENST00000531677.1:c.147A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.147A>T
  hgvsp: ENST00000527709.1:c.147A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8987
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19624
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser49Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

8-110566160-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566160
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566160
    reference: chr 8
allele count: 1
allele frequency: 8.295175525914129e-6
allele num: 120552
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.150A>G
  hgvsp: ENST00000395785.2:c.150A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-142A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.150A>G
  hgvsp: ENST00000530629.1:c.150A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.150A>G
  hgvsp: ENST00000527709.1:c.150A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.150A>G
  hgvsp: ENST00000531677.1:c.150A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.150A>G
  hgvsp: ENST00000534318.1:c.150A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.326A>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.150A>G
  hgvsp: ENST00000337573.5:c.150A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19284
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29960
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2705
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser50Ser
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum

8-110566161-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566161
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566161
    reference: chr 8
allele count: 4
allele frequency: 3.319171534784917e-5
allele num: 120512
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.151G>A
  hgvsp: ENSP00000437214.1:p.Val51Ile
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.151G>A
  hgvsp: ENSP00000337675.5:p.Val51Ile
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.151G>A
  hgvsp: ENSP00000379131.2:p.Val51Ile
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.151G>A
  hgvsp: ENSP00000434878.1:p.Val51Ile
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-141G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.151G>A
  hgvsp: ENSP00000432082.1:p.Val51Ile
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.151G>A
  hgvsp: ENSP00000435689.1:p.Val51Ile
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.327G>A
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8963
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val51Ile
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

8-110566161-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566161
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566161
    reference: chr 8
allele count: 2
allele frequency: 1.659585767392459e-5
allele num: 120512
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.151G>C
  hgvsp: ENSP00000437214.1:p.Val51Leu
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.151G>C
  hgvsp: ENSP00000379131.2:p.Val51Leu
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.151G>C
  hgvsp: ENSP00000435689.1:p.Val51Leu
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.151G>C
  hgvsp: ENSP00000434878.1:p.Val51Leu
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.151G>C
  hgvsp: ENSP00000337675.5:p.Val51Leu
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.151G>C
  hgvsp: ENSP00000432082.1:p.Val51Leu
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-141G>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.327G>C
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7990
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val51Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

8-110566176-GGTTTTTTTT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566176
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566167
    reference: chr 8
allele count: 1
allele frequency: 8.414108777598277e-6
allele num: 118848
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2396
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3226
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1003
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 5.75e1
  variant carriers: 0
hgvs: c.162+7_162+15delTTTTTTTGT
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
reference allele: GGTTTTTTTT
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

8-110566177-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566177
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566177
    reference: chr 8
allele count: 3
allele frequency: 2.545522426052573e-5
allele num: 117854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.162+5G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.162+5G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.162+5G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.162+5G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.162+5G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.162+5G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.338+5G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-130+5G>A
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12470
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6456
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
hgvs: c.162+5G>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

8-110566177-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566177
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566178
    reference: chr 8
allele count: 12
allele frequency: 1.018208970421029e-4
allele num: 117854
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.162+13dupT
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-130+13dupT
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.338+13dupT
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.162+13dupT
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.162+13dupT
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.162+13dupT
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.162+13dupT
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.162+13dupT
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16008
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12470
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13537
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6456
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17575
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 2.75e1
  variant carriers: 2
hgvs: c.162+13dupT
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD

8-110566177-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566177
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566177
    reference: chr 8
allele count: 522
allele frequency: 4.429209021331478e-3
allele num: 117854
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.162+5G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.162+5G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-130+5G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.162+5G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.162+5G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.338+5G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.162+5G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.162+5G>T
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 3.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 5.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 16008
  bin: 2.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 12470
  bin: 2.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 9401
  bin: 3.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 4.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 4.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 9.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1045
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6456
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13537
  bin: 9.75e1
  variant carriers: 514
hgvs: c.162+5G>T
num of homozygotes: 7
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

8-110566177-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566177
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566176
    reference: chr 8
allele count: 70
allele frequency: 5.939552327456005e-4
allele num: 117854
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.162+13delT
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.162+13delT
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.162+13delT
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.162+13delT
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.338+13delT
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-130+13delT
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.162+13delT
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.162+13delT
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4673
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12470
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16008
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9401
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2662
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13537
  bin: 9.75e1
  variant carriers: 67
hgvs: c.162+13delT
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: GT
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

8-110566184-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566184
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566184
    reference: chr 8
allele count: 27934
allele frequency: 2.397192091171221e-1
allele num: 116528
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-130+12T>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.162+12T>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.162+12T>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.162+12T>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.162+12T>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.338+12T>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.162+12T>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.162+12T>G
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.75e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 8277
  bin: 3.25e1
  variant carriers: 3267
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 7.5e0
  variant carriers: 207
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.25e1
  variant carriers: 367
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 6.75e1
  variant carriers: 265
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 4.75e1
  variant carriers: 873
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 3.75e1
  variant carriers: 2012
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.25e1
  variant carriers: 200
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 1.25e1
  variant carriers: 1275
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 4.25e1
  variant carriers: 1251
genotype depth: GenotypeDepth
  all individuals: 5479
  bin: 1.75e1
  variant carriers: 3199
genotype depth: GenotypeDepth
  all individuals: 10789
  bin: 2.25e1
  variant carriers: 4606
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 5.25e1
  variant carriers: 582
genotype depth: GenotypeDepth
  all individuals: 14780
  bin: 2.75e1
  variant carriers: 4574
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 8.25e1
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 9.75e1
  variant carriers: 1133
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 5.75e1
  variant carriers: 457
genotype quality: GenotypeQuality
  all individuals: 1457
  bin: 7.25e1
  variant carriers: 269
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 2.5e0
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 3.25e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 25017
  bin: 9.75e1
  variant carriers: 22150
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 5.75e1
  variant carriers: 174
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 13735
  bin: 6.25e1
  variant carriers: 226
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 7.5e0
  variant carriers: 36
num of homozygotes: 3496
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

8-110566186-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566186
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566186
    reference: chr 8
allele count: 1
allele frequency: 8.677241331435909e-6
allele num: 115244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.162+14G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.162+14G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.162+14G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.338+14G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.162+14G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.162+14G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.162+14G>T
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-130+14G>T
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8889
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9517
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8237
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2217
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

8-110566193-C-CTTTTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566193
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566198
    reference: chr 8
allele count: 49
allele frequency: 4.325259515570934e-4
allele num: 113288
alternate allele: CTTTTG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.338+37_338+41dupTTTTG
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.162+37_162+41dupTTTTG
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.162+37_162+41dupTTTTG
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.162+37_162+41dupTTTTG
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.162+37_162+41dupTTTTG
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-130+37_-130+41dupTTTTG
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.162+37_162+41dupTTTTG
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.162+37_162+41dupTTTTG
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7937
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6837
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15110
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6365
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 12432
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4519
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4899
  bin: 9.75e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 10564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2372
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18461
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

8-110566193-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566193
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566193
    reference: chr 8
allele count: 1
allele frequency: 8.827060235859049e-6
allele num: 113288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-130+21C>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.162+21C>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.162+21C>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.162+21C>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.162+21C>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.162+21C>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.162+21C>G
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.338+21C>G
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7937
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4519
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6720
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4899
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD

8-110566193-CTTTTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566193
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566188
    reference: chr 8
allele count: 2
allele frequency: 1.76541204717181e-5
allele num: 113288
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.162+37_162+41delTTTTG
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.162+37_162+41delTTTTG
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.162+37_162+41delTTTTG
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.162+37_162+41delTTTTG
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.338+37_338+41delTTTTG
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.162+37_162+41delTTTTG
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-130+37_-130+41delTTTTG
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.162+37_162+41delTTTTG
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7937
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6837
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: CTTTTG
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS

8-110566197-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566197
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566197
    reference: chr 8
allele count: 1
allele frequency: 8.98391878537418e-6
allele num: 111310
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-130+25T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.338+25T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.162+25T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.162+25T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.162+25T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.162+25T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.162+25T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.162+25T>C
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3817
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1945
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4659
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13106
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

8-110566198-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566198
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566198
    reference: chr 8
allele count: 1
allele frequency: 9.019409769824663e-6
allele num: 110872
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.162+26G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.162+26G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.162+26G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.162+26G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.162+26G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.162+26G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.338+26G>A
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-130+26G>A
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6605
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4392
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12359
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4620
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

8-110566204-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110566204
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 110566204
    reference: chr 8
allele count: 1
allele frequency: 9.00982070456798e-6
allele num: 110990
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl transcript: ENST00000529502
  gene symbol: EBAG9
  hgvsc: ENST00000529502.1:n.338+32T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000437214
  ensembl transcript: ENST00000527709
  gene symbol: EBAG9
  hgvsc: ENST00000527709.1:c.162+32T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000432082
  ensembl transcript: ENST00000531677
  gene symbol: EBAG9
  hgvsc: ENST00000531677.1:c.162+32T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000379131
  ensembl transcript: ENST00000395785
  gene symbol: EBAG9
  hgvsc: ENST00000395785.2:c.162+32T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435689
  ensembl transcript: ENST00000534318
  gene symbol: EBAG9
  hgvsc: ENST00000534318.1:c.162+32T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000435687
  ensembl transcript: ENST00000529931
  gene symbol: EBAG9
  hgvsc: ENST00000529931.1:c.-130+32T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000434878
  ensembl transcript: ENST00000530629
  gene symbol: EBAG9
  hgvsc: ENST00000530629.1:c.162+32T>C
  variant of: http://identifiers.org/hgnc/3123
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000147654
  ensembl protein: ENSP00000337675
  ensembl transcript: ENST00000337573
  gene symbol: EBAG9
  hgvsc: ENST00000337573.5:c.162+32T>C
  variant of: http://identifiers.org/hgnc/3123
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.164782794647767e-5
allele num: 65468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16004
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.766e0

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 1.601021e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e0

QD
type: SiteQuality
SIO_000300: 1.183e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.49e-1

GenotypeQuality
all individuals: 128
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15952
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.179801793298726e-4
allele num: 8476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65302
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11128
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.03e-1

DP
type: SiteQuality
SIO_000300: 1.597267e6

VQSLOD
type: SiteQuality
SIO_000300: 4.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.94e-1

QD
type: SiteQuality
SIO_000300: 1.104e1

GenotypeQuality
all individuals: 46564
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11108
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

East Asian
type: Population
allele count: 77
allele frequency: 9.084473808400188e-3
allele num: 8476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65254
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9544
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.270378730875344e-5
allele num: 15948
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.21e-1

FS
type: SiteQuality
SIO_000300: 1.158e0

QD
type: SiteQuality
SIO_000300: 1.026e1

MQRankSum
type: SiteQuality
SIO_000300: 1.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.19e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.597377e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10954
num of homozygotes: 0

European (Non-Finnish)
type: Population
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African
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South Asian
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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QD
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FS
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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Other
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele num: 64634
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Latino
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African
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East Asian
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MQ
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ReadPosRankSum
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QD
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InbreedingCoeff
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MQRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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DP
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VQSLOD
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GenotypeQuality
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Other
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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African
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European (Finnish)
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ReadPosRankSum
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MQ
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FS
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InbreedingCoeff
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ClippingRankSum
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DP
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MQRankSum
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VQSLOD
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QD
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BaseQRankSum
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GenotypeQuality
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Latino
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European (Finnish)
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East Asian
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African
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Other
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European (Non-Finnish)
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South Asian
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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BaseQRankSum
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FS
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DP
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MQ
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MQRankSum
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VQSLOD
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GenotypeQuality
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European (Finnish)
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Latino
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South Asian
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East Asian
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African
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European (Non-Finnish)
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Other
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MQ
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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ReadPosRankSum
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QD
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DP
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BaseQRankSum
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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Latino
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Other
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African
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European (Finnish)
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ReadPosRankSum
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QD
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FS
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DP
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BaseQRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Other
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South Asian
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Latino
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African
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DP
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QD
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MQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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ClippingRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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Other
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Latino
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European (Finnish)
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East Asian
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European (Non-Finnish)
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South Asian
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DP
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FS
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ClippingRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQRankSum
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MQ
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ReadPosRankSum
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East Asian
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European (Non-Finnish)
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Other
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Latino
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African
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European (Finnish)
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FS
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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ClippingRankSum
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DP
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QD
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ReadPosRankSum
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MQRankSum
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African
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European (Non-Finnish)
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allele frequency: 2.597672485453034e-5
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East Asian
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European (Finnish)
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Latino
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Other
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FS
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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ReadPosRankSum
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ClippingRankSum
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QD
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MQ
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VQSLOD
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African
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European (Finnish)
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Latino
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South Asian
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Other
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East Asian
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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ClippingRankSum
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MQ
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DP
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MQRankSum
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FS
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European (Non-Finnish)
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Latino
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East Asian
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European (Finnish)
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African
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South Asian
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ReadPosRankSum
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MQ
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InbreedingCoeff
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QD
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FS
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MQRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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VQSLOD
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Other
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East Asian
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European (Non-Finnish)
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Latino
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African
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South Asian
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ReadPosRankSum
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MQRankSum
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FS
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ClippingRankSum
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DP
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BaseQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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MQ
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South Asian
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African
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East Asian
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Other
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Latino
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allele frequency: 3.725490196078431e-1
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European (Non-Finnish)
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allele frequency: 1.523258616534105e-1
allele num: 8298
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BaseQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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QD
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DP
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ReadPosRankSum
type: SiteQuality
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European (Finnish)
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Other
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East Asian
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European (Non-Finnish)
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African
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Latino
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BaseQRankSum
type: SiteQuality
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MQRankSum
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FS
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MQ
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QD
type: SiteQuality
SIO_000300: 8.65e0

VQSLOD
type: SiteQuality
SIO_000300: -1.011e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-1

DP
type: SiteQuality
SIO_000300: 5.34763e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.25e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1106
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 1.163091238046007e-3
allele num: 7738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.34803e5

BaseQRankSum
type: SiteQuality
SIO_000300: 4.45e-1

FS
type: SiteQuality
SIO_000300: 1.158e0

QD
type: SiteQuality
SIO_000300: 8.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.55e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.153e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.33e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.09e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 608
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 2.615062761506276e-3
allele num: 1912
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8276
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.748e0

DP
type: SiteQuality
SIO_000300: 5.34961e5

MQRankSum
type: SiteQuality
SIO_000300: -5.52e-1

FS
type: SiteQuality
SIO_000300: 1.748e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.33e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

QD
type: SiteQuality
SIO_000300: 1.503e1

Latino
type: Population
allele count: 149
allele frequency: 3.669950738916256e-1
allele num: 406
num of homozygotes: 31

African
type: Population
allele count: 690
allele frequency: 3.474320241691843e-1
allele num: 1986
num of homozygotes: 121

East Asian
type: Population
allele count: 164
allele frequency: 2.679738562091503e-1
allele num: 612
num of homozygotes: 23

Other
type: Population
allele count: 42
allele frequency: 2.0e-1
allele num: 210
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 196
allele frequency: 1.713286713286713e-1
allele num: 1144
num of homozygotes: 10

European (Non-Finnish)
type: Population
allele count: 1240
allele frequency: 1.486097794822627e-1
allele num: 8344
num of homozygotes: 87

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.46e-1

FS
type: SiteQuality
SIO_000300: 5.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.75e-2

QD
type: SiteQuality
SIO_000300: 1.674e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

DP
type: SiteQuality
SIO_000300: 5.5191e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

East Asian
type: Population
allele count: 165
allele frequency: 2.696078431372549e-1
allele num: 612
num of homozygotes: 24

European (Non-Finnish)
type: Population
allele count: 1223
allele frequency: 1.472429568986275e-1
allele num: 8306
num of homozygotes: 86

African
type: Population
allele count: 680
allele frequency: 3.455284552845528e-1
allele num: 1968
num of homozygotes: 118

European (Finnish)
type: Population
allele count: 196
allele frequency: 1.716287215411559e-1
allele num: 1142
num of homozygotes: 10

Other
type: Population
allele count: 44
allele frequency: 2.05607476635514e-1
allele num: 214
num of homozygotes: 3

South Asian
type: Population
allele count: 1322
allele frequency: 1.704047434905904e-1
allele num: 7758
num of homozygotes: 126

QD
type: SiteQuality
SIO_000300: 1.74e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.43e-2

FS
type: SiteQuality
SIO_000300: 5.44e-1

DP
type: SiteQuality
SIO_000300: 5.41094e5

VQSLOD
type: SiteQuality
SIO_000300: 3.54e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.64e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1116
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.313715186547556e-4
allele num: 7612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.296e0

QD
type: SiteQuality
SIO_000300: 1.544e1

VQSLOD
type: SiteQuality
SIO_000300: -2.663e0

MQRankSum
type: SiteQuality
SIO_000300: -2.419e0

FS
type: SiteQuality
SIO_000300: 2.793e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.04e-1

DP
type: SiteQuality
SIO_000300: 4.84431e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.296e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-2

GenotypeQuality
all individuals: 7469
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2455
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4099
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4187
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4513
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1028
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23004
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10026
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.71948e5

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.71e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeQuality
all individuals: 689
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4513
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 349
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1090
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1196
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3072
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3984
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.671122994652406e-4
allele num: 5984
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

VQSLOD
type: SiteQuality
SIO_000300: -1.216e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.081464e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.096e0

QD
type: SiteQuality
SIO_000300: 8.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.096e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.52e-1

GenotypeQuality
all individuals: 18105
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1109
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2122
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1384
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4513
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.132832080200501e-5
allele num: 31920
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5172
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7242
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11162
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.922e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.04e-1

DP
type: SiteQuality
SIO_000300: 1.196647e6

QD
type: SiteQuality
SIO_000300: 1.333e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2078
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26408
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 9.295984134853743e-5
allele num: 32272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7326
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

FS
type: SiteQuality
SIO_000300: 1.107e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.596e0

DP
type: SiteQuality
SIO_000300: 1.204389e6

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.263e1

GenotypeQuality
all individuals: 747
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17950
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4511
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2071
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 761
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1343
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6742
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32528
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.19e0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.018e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e0

VQSLOD
type: SiteQuality
SIO_000300: -2.854e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

DP
type: SiteQuality
SIO_000300: 1.206825e6

GenotypeQuality
all individuals: 699
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17937
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 26692
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.485001485001485e-4
allele num: 6734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.077870113881194e-5
allele num: 32490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7306
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11244
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.207032e6

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

FS
type: SiteQuality
SIO_000300: 1.538e0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.104e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.67e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.067484662576687e-5
allele num: 32600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3700
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e-1

FS
type: SiteQuality
SIO_000300: 2.019e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.168e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.146e1

DP
type: SiteQuality
SIO_000300: 1.206231e6

GenotypeQuality
all individuals: 385
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4511
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.084515731030228e-5
allele num: 32420
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3658
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11212
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.68e0

DP
type: SiteQuality
SIO_000300: 1.201218e6

VQSLOD
type: SiteQuality
SIO_000300: 3.71e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.444e0

MQRankSum
type: SiteQuality
SIO_000300: 6.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

FS
type: SiteQuality
SIO_000300: 4.788e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

QD
type: SiteQuality
SIO_000300: 1.136e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11198
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5202
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.398992725237829e-4
allele num: 7148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.513e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 3.97e0

DP
type: SiteQuality
SIO_000300: 1.194975e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 170
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11180
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.407261469180974e-4
allele num: 7106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32304
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6652
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.42e0

FS
type: SiteQuality
SIO_000300: 2.632e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.97e-1

DP
type: SiteQuality
SIO_000300: 1.193206e6

VQSLOD
type: SiteQuality
SIO_000300: -1.255e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

GenotypeQuality
all individuals: 4512
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3595
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 473
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variant carriers: 0

GenotypeQuality
all individuals: 31110
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10840
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.598976654940838e-4
allele num: 6254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6158
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.124842e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

FS
type: SiteQuality
SIO_000300: 2.659e0

QD
type: SiteQuality
SIO_000300: 1.384e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.3e-3

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3798
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variant carriers: 0

GenotypeQuality
all individuals: 675
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.756921320521359e-5
allele num: 21022
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2062
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4926
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.57e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.33418e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e0

QD
type: SiteQuality
SIO_000300: 1.2e1

MQ
type: SiteQuality
SIO_000300: 5.903e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.16e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.264e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4509
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.984547901505333e-5
allele num: 20062
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3492
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.129e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.793e0

DP
type: SiteQuality
SIO_000300: 9.176e5

QD
type: SiteQuality
SIO_000300: 2.965e1

VQSLOD
type: SiteQuality
SIO_000300: -3.243e0

FS
type: SiteQuality
SIO_000300: 1.852e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e0

MQ
type: SiteQuality
SIO_000300: 3.807e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.81e-2

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 693
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.208095356344674e-5
allele num: 16108
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4172
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 344
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.10938540048813e-4
allele num: 9014
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.01e-2

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.43819e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 365
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GenotypeQuality
all individuals: 691
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1780
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1098
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8826
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.813e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.54e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.158e0

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.31e-1

DP
type: SiteQuality
SIO_000300: 8.11022e5

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3742
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13718
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 930
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.539999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -9.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 7.89715e5

MQRankSum
type: SiteQuality
SIO_000300: 5.52e-1

FS
type: SiteQuality
SIO_000300: 4.383e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.23e-1

QD
type: SiteQuality
SIO_000300: 1.587e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1032
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 282
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 1.295336787564767e-3
allele num: 8492
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12580
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.59e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.24e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.56243e5

QD
type: SiteQuality
SIO_000300: 1.389e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.93e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.436e0

FS
type: SiteQuality
SIO_000300: 2.922e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.424e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.65e0

DP
type: SiteQuality
SIO_000300: 7.29904e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.78e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.29e-1

QD
type: SiteQuality
SIO_000300: 1.737e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11294
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51804960986125e-5
allele num: 65874
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.9752e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

QD
type: SiteQuality
SIO_000300: 1.003e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.104260774020266e-5
allele num: 16382
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

MQ
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.517450682852807e-5
allele num: 65900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11296
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.6e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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DP
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QD
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 2.655807365439094e-4
allele num: 11296
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65900
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6564
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Other
type: Population
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
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DP
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66072
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East Asian
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Latino
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South Asian
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African
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European (Finnish)
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Other
type: Population
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MQ
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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FS
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MQRankSum
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DP
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

African
type: Population
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Latino
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Other
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.531037607612143e-5
allele num: 66210
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South Asian
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VQSLOD
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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QD
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SIO_000300: 1.655e1

FS
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SIO_000300: 1.333e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.009339e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.99e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66480
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.643e0

DP
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QD
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ReadPosRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.340000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.181e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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SIO_000300: 2.26e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.063545961678389e-5
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66536
num of homozygotes: 0

Other
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.76e-1

FS
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SIO_000300: 5.365e0

VQSLOD
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SIO_000300: -1.934e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

QD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
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SIO_000300: 2.025802e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.413e0

BaseQRankSum
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SIO_000300: 2.14e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502765087761481e-5
allele num: 66544
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 11382
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.62e-1

DP
type: SiteQuality
SIO_000300: 2.025985e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.231e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.068e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.73e-1

MQ
type: SiteQuality
SIO_000300: 5.898e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
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allele count: 3
allele frequency: 2.884060757546626e-4
allele num: 10402
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502629601803156e-5
allele num: 66550
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 2.026375e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 3.516e0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.479e0

QD
type: SiteQuality
SIO_000300: 1.15e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.502629601803156e-5
allele num: 66550
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
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DP
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: 2.03e0

QD
type: SiteQuality
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ClippingRankSum
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SIO_000300: -2.756e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66568
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
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BaseQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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MQ
type: SiteQuality
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MQRankSum
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FS
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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num of homozygotes: 0

Other
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BaseQRankSum
type: SiteQuality
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DP
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
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VQSLOD
type: SiteQuality
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QD
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ReadPosRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 66514
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South Asian
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Other
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Latino
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European (Finnish)
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East Asian
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ReadPosRankSum
type: SiteQuality
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DP
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VQSLOD
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FS
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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QD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele num: 8628
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.27e-1

QD
type: SiteQuality
SIO_000300: 1.839e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.734e-1

DP
type: SiteQuality
SIO_000300: 2.025234e6

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.926782273603083e-4
allele num: 10380
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.39e-1

QD
type: SiteQuality
SIO_000300: 1.398e1

FS
type: SiteQuality
SIO_000300: 3.673e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 2.017506e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16144018583043e-4
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66242
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.88e-1

QD
type: SiteQuality
SIO_000300: 9.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-2

DP
type: SiteQuality
SIO_000300: 2.014883e6

FS
type: SiteQuality
SIO_000300: 3.283e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66214
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.855050115651503e-4
allele num: 10376
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.036e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e-2

QD
type: SiteQuality
SIO_000300: 1.133e1

DP
type: SiteQuality
SIO_000300: 2.013579e6

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 130
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510254628930438e-5
allele num: 66214
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

DP
type: SiteQuality
SIO_000300: 2.013579e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.44e-1

QD
type: SiteQuality
SIO_000300: 1.133e1

MQ
type: SiteQuality
SIO_000300: 5.939e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.036e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536617597344725e-5
allele num: 65078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.915e0

FS
type: SiteQuality
SIO_000300: 2.385e0

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.75e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

DP
type: SiteQuality
SIO_000300: 1.972754e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.462e0

MQRankSum
type: SiteQuality
SIO_000300: -1.421e0

QD
type: SiteQuality
SIO_000300: 9.32e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.778994719342852e-5
allele num: 10226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.103951330043145e-5
allele num: 64434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16136
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FS
type: SiteQuality
SIO_000300: 7.52e-1

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.968104e6

VQSLOD
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.482e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.07e-2

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 4
allele frequency: 2.478929102627665e-4
allele num: 16136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.311853990129435e-5
allele num: 64434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
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African
type: Population
allele count: 1
allele frequency: 9.778994719342852e-5
allele num: 10226
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.919015340706386e-5
allele num: 11212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 890
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.07e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

DP
type: SiteQuality
SIO_000300: 1.968104e6

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.52e-1

QD
type: SiteQuality
SIO_000300: 1.36e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1321
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Latino
type: Population
allele count: 27
allele frequency: 2.408134141990724e-3
allele num: 11212
num of homozygotes: 0

African
type: Population
allele count: 489
allele frequency: 4.781928417758655e-2
allele num: 10226
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Other
type: Population
allele count: 3
allele frequency: 3.370786516853933e-3
allele num: 890
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.655926995064718e-5
allele num: 64434
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.482e0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.968104e6

FS
type: SiteQuality
SIO_000300: 7.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.07e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 986
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GenotypeQuality
all individuals: 1481
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 7.5e0
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GenotypeQuality
all individuals: 181
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17575
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1218
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6456
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2171
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1046
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2266
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.675704602211916e-4
allele num: 11212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.103951330043145e-5
allele num: 64434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.528117359413203e-4
allele num: 6544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

African
type: Population
allele count: 64
allele frequency: 6.258556620379425e-3
allele num: 10226
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

QD
type: SiteQuality
SIO_000300: 1.36e1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.07e-2

DP
type: SiteQuality
SIO_000300: 1.968104e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.482e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.54e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 433
bin: 4.25e1
variant carriers: 141

GenotypeQuality
all individuals: 4534
bin: 6.75e1
variant carriers: 177

GenotypeQuality
all individuals: 559
bin: 5.25e1
variant carriers: 155

GenotypeQuality
all individuals: 1607
bin: 2.75e1
variant carriers: 75

GenotypeQuality
all individuals: 964
bin: 3.75e1
variant carriers: 107

GenotypeQuality
all individuals: 911
bin: 8.25e1
variant carriers: 187

GenotypeQuality
all individuals: 5074
bin: 2.25e1
variant carriers: 47

GenotypeQuality
all individuals: 1575
bin: 7.75e1
variant carriers: 247

GenotypeQuality
all individuals: 135
bin: 1.25e1
variant carriers: 32

GenotypeQuality
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bin: 9.25e1
variant carriers: 222

GenotypeQuality
all individuals: 551
bin: 8.75e1
variant carriers: 260

GenotypeQuality
all individuals: 406
bin: 4.75e1
variant carriers: 140

Other
type: Population
allele count: 201
allele frequency: 2.258426966292135e-1
allele num: 890
num of homozygotes: 20

East Asian
type: Population
allele count: 2737
allele frequency: 3.32806420233463e-1
allele num: 8224
num of homozygotes: 459

Latino
type: Population
allele count: 3777
allele frequency: 3.425539633593325e-1
allele num: 11026
num of homozygotes: 631

African
type: Population
allele count: 1355
allele frequency: 1.333398937217083e-1
allele num: 10162
num of homozygotes: 89

South Asian
type: Population
allele count: 3765
allele frequency: 2.332135777998018e-1
allele num: 16144
num of homozygotes: 457

European (Non-Finnish)
type: Population
allele count: 14291
allele frequency: 2.247719408619063e-1
allele num: 63580
num of homozygotes: 1591

European (Finnish)
type: Population
allele count: 1808
allele frequency: 2.780682866810212e-1
allele num: 6502
num of homozygotes: 249

QD
type: SiteQuality
SIO_000300: 1.873e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.32e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e-1

FS
type: SiteQuality
SIO_000300: 8.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

DP
type: SiteQuality
SIO_000300: 1.944742e6

VQSLOD
type: SiteQuality
SIO_000300: 4.26e0

GenotypeQuality
all individuals: 349
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23532
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variant carriers: 0

GenotypeQuality
all individuals: 2875
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
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variant carriers: 0

GenotypeQuality
all individuals: 85
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4859
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variant carriers: 1

GenotypeQuality
all individuals: 2486
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62638
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.252344629235963e-5
allele num: 15994
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10962
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.750986e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.41e0

VQSLOD
type: SiteQuality
SIO_000300: -4.392e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.115e0

QD
type: SiteQuality
SIO_000300: 1.795e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

GenotypeQuality
all individuals: 240
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
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variant carriers: 0

GenotypeQuality
all individuals: 492
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variant carriers: 0

GenotypeQuality
all individuals: 566
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variant carriers: 0

GenotypeQuality
all individuals: 6720
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variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 8.25e1
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GenotypeQuality
all individuals: 3604
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GenotypeQuality
all individuals: 2419
bin: 3.75e1
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GenotypeQuality
all individuals: 95
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variant carriers: 0

GenotypeQuality
all individuals: 487
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variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 9.25e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.885038754640787e-5
allele num: 61412
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.277904328018223e-3
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 41
allele frequency: 4.095904095904096e-3
allele num: 10010
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.853224610822832e-4
allele num: 10792
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.2531328320802e-4
allele num: 7980
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

MQ
type: SiteQuality
SIO_000300: 5.46e1

MQRankSum
type: SiteQuality
SIO_000300: -2.573e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.54e-1

DP
type: SiteQuality
SIO_000300: 1.655038e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

QD
type: SiteQuality
SIO_000300: 1.104e1

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2372
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variant carriers: 0

GenotypeQuality
all individuals: 576
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variant carriers: 0

GenotypeQuality
all individuals: 223
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variant carriers: 0

GenotypeQuality
all individuals: 492
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variant carriers: 0

GenotypeQuality
all individuals: 18461
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GenotypeQuality
all individuals: 670
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variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
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GenotypeQuality
all individuals: 3604
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variant carriers: 0

GenotypeQuality
all individuals: 2419
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2014
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.99000999000999e-5
allele num: 10010
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10792
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15796
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.46e1

MQRankSum
type: SiteQuality
SIO_000300: -2.573e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.18e-1

QD
type: SiteQuality
SIO_000300: 1.104e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

DP
type: SiteQuality
SIO_000300: 1.655038e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

GenotypeQuality
all individuals: 10564
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4519
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3604
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2014
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variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2372
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6720
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2419
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18461
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4899
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10792
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.628346251546929e-5
allele num: 61412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.99000999000999e-5
allele num: 10010
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7980
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15796
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.54e-1

QD
type: SiteQuality
SIO_000300: 1.104e1

DP
type: SiteQuality
SIO_000300: 1.655038e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.18e-1

MQ
type: SiteQuality
SIO_000300: 5.46e1

MQRankSum
type: SiteQuality
SIO_000300: -2.573e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 364
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1153
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GenotypeQuality
all individuals: 363
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GenotypeQuality
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GenotypeQuality
all individuals: 581
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 99
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GenotypeQuality
all individuals: 562
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GenotypeQuality
all individuals: 3323
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4802
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7772
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.010509296685529e-4
allele num: 9896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10660
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60002
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.507e0

DP
type: SiteQuality
SIO_000300: 1.518323e6

VQSLOD
type: SiteQuality
SIO_000300: -1.593e0

MQ
type: SiteQuality
SIO_000300: 5.814e1

QD
type: SiteQuality
SIO_000300: 1.674e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.77e-1

GenotypeQuality
all individuals: 1020
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 830
bin: 8.25e1
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GenotypeQuality
all individuals: 198
bin: 2.5e0
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GenotypeQuality
all individuals: 661
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 1.25e1
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GenotypeQuality
all individuals: 4799
bin: 9.75e1
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GenotypeQuality
all individuals: 1152
bin: 7.75e1
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GenotypeQuality
all individuals: 3268
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1312
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13528
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59748
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.294665976178146e-4
allele num: 7724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15676
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.92e-1

DP
type: SiteQuality
SIO_000300: 1.515738e6

QD
type: SiteQuality
SIO_000300: 1.471e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e0

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.964e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0