6-133836463-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836463
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836463
    reference: chr 6
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1362C>T
  hgvsp: ENST00000430974.2:c.1362C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1437C>T
  hgvsp: ENST00000355286.6:c.1437C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1506C>T
  hgvsp: ENST00000431403.2:c.1506C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1506C>T
  hgvsp: ENST00000367895.5:c.1506C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1506C>T
  hgvsp: ENST00000355167.3:c.1506C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1437C>T
  hgvsp: ENST00000525849.1:c.1437C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1344C>T
  hgvsp: ENST00000452339.2:c.1344C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8004G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1524C>T
  hgvsp: ENST00000531901.1:c.1524C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3658
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu502Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

6-133836475-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836475
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836475
    reference: chr 6
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1518C>G
  hgvsp: ENST00000431403.2:c.1518C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1356C>G
  hgvsp: ENST00000452339.2:c.1356C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1536C>G
  hgvsp: ENST00000531901.1:c.1536C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1449C>G
  hgvsp: ENST00000525849.1:c.1449C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1374C>G
  hgvsp: ENST00000430974.2:c.1374C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1518C>G
  hgvsp: ENST00000355167.3:c.1518C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1518C>G
  hgvsp: ENST00000367895.5:c.1518C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8016G>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1449C>G
  hgvsp: ENST00000355286.6:c.1449C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8147
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7556
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3483
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3658
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala506Ala
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

6-133836480-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836480
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836480
    reference: chr 6
allele count: 7
allele frequency: 5.766537606063102e-5
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1541G>A
  hgvsp: ENSP00000432770.1:p.Arg514Lys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1523G>A
  hgvsp: ENSP00000347294.3:p.Arg508Lys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1361G>A
  hgvsp: ENSP00000395916.2:p.Arg454Lys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1523G>A
  hgvsp: ENSP00000404558.2:p.Arg508Lys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8021C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1454G>A
  hgvsp: ENSP00000433219.1:p.Arg485Lys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1379G>A
  hgvsp: ENSP00000388670.2:p.Arg460Lys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1454G>A
  hgvsp: ENSP00000347434.6:p.Arg485Lys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1523G>A
  hgvsp: ENSP00000356870.5:p.Arg508Lys
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3511
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg508Lys
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

6-133836480-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836480
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836480
    reference: chr 6
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1361G>C
  hgvsp: ENSP00000395916.2:p.Arg454Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1454G>C
  hgvsp: ENSP00000347434.6:p.Arg485Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1523G>C
  hgvsp: ENSP00000356870.5:p.Arg508Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1523G>C
  hgvsp: ENSP00000404558.2:p.Arg508Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1541G>C
  hgvsp: ENSP00000432770.1:p.Arg514Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1379G>C
  hgvsp: ENSP00000388670.2:p.Arg460Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1523G>C
  hgvsp: ENSP00000347294.3:p.Arg508Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1454G>C
  hgvsp: ENSP00000433219.1:p.Arg485Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8021C>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3511
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32813
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Arg508Thr
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP

6-133836495-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836495
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836495
    reference: chr 6
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1394A>G
  hgvsp: ENSP00000388670.2:p.Gln465Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1538A>G
  hgvsp: ENSP00000347294.3:p.Gln513Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1538A>G
  hgvsp: ENSP00000404558.2:p.Gln513Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1469A>G
  hgvsp: ENSP00000347434.6:p.Gln490Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1556A>G
  hgvsp: ENSP00000432770.1:p.Gln519Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1469A>G
  hgvsp: ENSP00000433219.1:p.Gln490Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1376A>G
  hgvsp: ENSP00000395916.2:p.Gln459Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1538A>G
  hgvsp: ENSP00000356870.5:p.Gln513Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8036T>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7556
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32813
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln513Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

6-133836497-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836497
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836497
    reference: chr 6
allele count: 3
allele frequency: 2.471088267272907e-5
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1396T>C
  hgvsp: ENST00000430974.2:c.1396T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8038A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1471T>C
  hgvsp: ENST00000525849.1:c.1471T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1540T>C
  hgvsp: ENST00000367895.5:c.1540T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1471T>C
  hgvsp: ENST00000355286.6:c.1471T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1378T>C
  hgvsp: ENST00000452339.2:c.1378T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1558T>C
  hgvsp: ENST00000531901.1:c.1558T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1540T>C
  hgvsp: ENST00000431403.2:c.1540T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1540T>C
  hgvsp: ENST00000355167.3:c.1540T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4819
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3666
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32816
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu514Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

6-133836503-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836503
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836503
    reference: chr 6
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1564G>A
  hgvsp: ENSP00000432770.1:p.Ala522Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1546G>A
  hgvsp: ENSP00000404558.2:p.Ala516Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1546G>A
  hgvsp: ENSP00000347294.3:p.Ala516Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1384G>A
  hgvsp: ENSP00000395916.2:p.Ala462Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1546G>A
  hgvsp: ENSP00000356870.5:p.Ala516Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1402G>A
  hgvsp: ENSP00000388670.2:p.Ala468Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1477G>A
  hgvsp: ENSP00000347434.6:p.Ala493Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1477G>A
  hgvsp: ENSP00000433219.1:p.Ala493Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8044C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4815
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3485
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala516Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

6-133836510-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836510
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836510
    reference: chr 6
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1571T>C
  hgvsp: ENSP00000432770.1:p.Ile524Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1484T>C
  hgvsp: ENSP00000433219.1:p.Ile495Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1391T>C
  hgvsp: ENSP00000395916.2:p.Ile464Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1484T>C
  hgvsp: ENSP00000347434.6:p.Ile495Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1409T>C
  hgvsp: ENSP00000388670.2:p.Ile470Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1553T>C
  hgvsp: ENSP00000404558.2:p.Ile518Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1553T>C
  hgvsp: ENSP00000356870.5:p.Ile518Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1553T>C
  hgvsp: ENSP00000347294.3:p.Ile518Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8051A>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile518Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

6-133836535-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836535
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836535
    reference: chr 6
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1416A>T
  hgvsp: ENST00000452339.2:c.1416A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1578A>T
  hgvsp: ENST00000367895.5:c.1578A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1434A>T
  hgvsp: ENST00000430974.2:c.1434A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1578A>T
  hgvsp: ENST00000355167.3:c.1578A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1578A>T
  hgvsp: ENST00000431403.2:c.1578A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1509A>T
  hgvsp: ENST00000355286.6:c.1509A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1509A>T
  hgvsp: ENST00000525849.1:c.1509A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8076T>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1596A>T
  hgvsp: ENST00000531901.1:c.1596A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8159
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7554
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3510
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu526Leu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

6-133836560-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836560
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836560
    reference: chr 6
allele count: 2
allele frequency: 1.647636465490254e-5
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1459A>G
  hgvsp: ENSP00000388670.2:p.Ile487Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8101T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1603A>G
  hgvsp: ENSP00000347294.3:p.Ile535Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1603A>G
  hgvsp: ENSP00000356870.5:p.Ile535Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1441A>G
  hgvsp: ENSP00000395916.2:p.Ile481Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1534A>G
  hgvsp: ENSP00000433219.1:p.Ile512Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1603A>G
  hgvsp: ENSP00000404558.2:p.Ile535Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1621A>G
  hgvsp: ENSP00000432770.1:p.Ile541Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1534A>G
  hgvsp: ENSP00000347434.6:p.Ile512Val
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3483
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile535Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

6-133836563-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836563
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836563
    reference: chr 6
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1624A>T
  hgvsp: ENSP00000432770.1:p.Ile542Phe
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1462A>T
  hgvsp: ENSP00000388670.2:p.Ile488Phe
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1537A>T
  hgvsp: ENSP00000433219.1:p.Ile513Phe
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1444A>T
  hgvsp: ENSP00000395916.2:p.Ile482Phe
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8104T>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1537A>T
  hgvsp: ENSP00000347434.6:p.Ile513Phe
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1606A>T
  hgvsp: ENSP00000347294.3:p.Ile536Phe
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1606A>T
  hgvsp: ENSP00000404558.2:p.Ile536Phe
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1606A>T
  hgvsp: ENSP00000356870.5:p.Ile536Phe
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile536Phe
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

6-133836568-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836568
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836568
    reference: chr 6
allele count: 4
allele frequency: 3.295653033648617e-5
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1542C>T
  hgvsp: ENST00000355286.6:c.1542C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1611C>T
  hgvsp: ENST00000355167.3:c.1611C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1611C>T
  hgvsp: ENST00000367895.5:c.1611C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1629C>T
  hgvsp: ENST00000531901.1:c.1629C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1611C>T
  hgvsp: ENST00000431403.2:c.1611C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1542C>T
  hgvsp: ENST00000525849.1:c.1542C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8109G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1467C>T
  hgvsp: ENST00000430974.2:c.1467C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1449C>T
  hgvsp: ENST00000452339.2:c.1449C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32820
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Ser537Ser
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD

6-133836587-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836587
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836587
    reference: chr 6
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1547+14T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1616+14T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1616+14T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8128A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1634+14T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1454+14T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1547+14T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1616+14T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1472+14T>C
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4255
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3509
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

6-133836588-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836588
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836588
    reference: chr 6
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1454+15T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1616+15T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1547+15T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1472+15T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1616+15T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1547+15T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8129A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1634+15T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1616+15T>C
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3509
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

6-133836597-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836597
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836597
    reference: chr 6
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1616+24A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1616+24A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1547+24A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1634+24A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1454+24A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1472+24A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1616+24A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8138T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1547+24A>G
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3657
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/6-133836605-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836605
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836605
    reference: chr 6
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1616+32C>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1454+32C>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1547+32C>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1472+32C>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8146G>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1616+32C>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1634+32C>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1547+32C>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1616+32C>A
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5334
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8134
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

6-133836605-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836605
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836605
    reference: chr 6
allele count: 12
allele frequency: 9.896417496866134e-5
allele num: 121256
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1616+32C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1454+32C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1616+32C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1547+32C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1547+32C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8146G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1634+32C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1472+32C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1616+32C>T
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4257
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5334
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7543
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

6-133836606-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836606
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836606
    reference: chr 6
allele count: 5
allele frequency: 4.123711340206185e-5
allele num: 121250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1634+33G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1616+33G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1454+33G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1616+33G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1547+33G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8147C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1547+33G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1616+33G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1472+33G>A
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7538
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6689
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8390
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3653
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32816
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

6-133836610-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836610
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836610
    reference: chr 6
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1547+37T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1472+37T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1616+37T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1634+37T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8151A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1616+37T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1616+37T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1547+37T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1454+37T>C
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6683
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3977
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/6-133836612-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836612
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836612
    reference: chr 6
allele count: 1
allele frequency: 8.247966876165026e-6
allele num: 121242
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8153T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1547+39A>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1616+39A>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1616+39A>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1634+39A>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1454+39A>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1547+39A>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1616+39A>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1472+39A>C
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7533
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4250
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS

6-133836618-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133836618
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133836618
    reference: chr 6
allele count: 1
allele frequency: 8.251369727374745e-6
allele num: 121192
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1472+45T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1547+45T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2262-8159A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1616+45T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1616+45T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1454+45T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1634+45T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1616+45T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1547+45T>C
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4251
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6503
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1995
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-133844150-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844150
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844150
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 118082
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1548-44T>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1635-44T>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1548-44T>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1617-44T>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1617-44T>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1455-44T>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12768A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1617-44T>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1473-44T>G
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5135
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14765
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3720
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12159
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1303
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

6-133844154-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844154
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844154
    reference: chr 6
allele count: 1
allele frequency: 8.466540232999188e-6
allele num: 118112
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1548-40G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1617-40G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1548-40G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1635-40G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1455-40G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1617-40G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12764C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1473-40G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1617-40G>A
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5172
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1320
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

6-133844155-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844155
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844155
    reference: chr 6
allele count: 1
allele frequency: 8.45337120443633e-6
allele num: 118296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1455-39T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1617-39T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1635-39T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1617-39T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1473-39T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1548-39T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1548-39T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1617-39T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12763A>G
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11195
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2854
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2030
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

6-133844156-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844156
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844156
    reference: chr 6
allele count: 3
allele frequency: 2.536697558005818e-5
allele num: 118264
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1455-38A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12762T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1617-38A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1548-38A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1548-38A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1473-38A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1635-38A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1617-38A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1617-38A>G
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11293
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2977
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14632
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4633
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

6-133844158-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844158
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844158
    reference: chr 6
allele count: 1
allele frequency: 8.449656943928076e-6
allele num: 118348
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1617-36T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1473-36T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1548-36T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12760A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1635-36T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1617-36T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1455-36T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1617-36T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1548-36T>C
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4671
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2994
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6083
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

6-133844163-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844163
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844163
    reference: chr 6
allele count: 1
allele frequency: 8.411843876177658e-6
allele num: 118880
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1473-31A>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1617-31A>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1617-31A>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1635-31A>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1548-31A>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1548-31A>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12755T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1455-31A>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1617-31A>T
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19225
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5255
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16913
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

6-133844165-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844165
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844165
    reference: chr 6
allele count: 1
allele frequency: 8.406328283932143e-6
allele num: 118958
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1455-29C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1548-29C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12753G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1635-29C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1617-29C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1617-29C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1548-29C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1473-29C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1617-29C>T
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5275
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8904
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19485
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6345
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-133844169-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844169
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844169
    reference: chr 6
allele count: 1
allele frequency: 8.381105635455429e-6
allele num: 119316
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1617-25C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1617-25C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1635-25C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1617-25C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1455-25C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1548-25C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1548-25C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12749G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1473-25C>T
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6469
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16914
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17713
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

6-133844174-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844174
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844174
    reference: chr 6
allele count: 1
allele frequency: 8.348639171814994e-6
allele num: 119780
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1617-20A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1617-20A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1548-20A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1548-20A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1617-20A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1635-20A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12744T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1455-20A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1473-20A>G
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9246
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12040
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS

6-133844179-TCCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844179
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844175
    reference: chr 6
allele count: 2
allele frequency: 1.663755095249979e-5
allele num: 120210
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1617-11_1617-8delCCCT
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1548-11_1548-8delCCCT
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12735_2261+12738delGAGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1617-11_1617-8delCCCT
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1617-11_1617-8delCCCT
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1473-11_1473-8delCCCT
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1455-11_1455-8delCCCT
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1548-11_1548-8delCCCT
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1635-11_1635-8delCCCT
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5367
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18404
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: TCCTC
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

6-133844181-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844181
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844181
    reference: chr 6
allele count: 19
allele frequency: 1.579936469922999e-4
allele num: 120258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1455-13C>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1548-13C>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12737G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1617-13C>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1617-13C>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1548-13C>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1617-13C>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1635-13C>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1473-13C>G
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9385
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5378
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12078
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3109
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4974
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4155
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

6-133844183-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844183
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844183
    reference: chr 6
allele count: 21
allele frequency: 1.744823689720496e-4
allele num: 120356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1455-11C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1548-11C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1617-11C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12735G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1548-11C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1635-11C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1473-11C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1617-11C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1617-11C>T
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5389
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20392
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS

6-133844196-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844196
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844196
    reference: chr 6
allele count: 1
allele frequency: 8.285690612312537e-6
allele num: 120690
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1619G>C
  hgvsp: ENSP00000347294.3:p.Ser540Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1550G>C
  hgvsp: ENSP00000433219.1:p.Ser517Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1457G>C
  hgvsp: ENSP00000395916.2:p.Ser486Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1550G>C
  hgvsp: ENSP00000347434.6:p.Ser517Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1475G>C
  hgvsp: ENSP00000388670.2:p.Ser492Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1619G>C
  hgvsp: ENSP00000356870.5:p.Ser540Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1637G>C
  hgvsp: ENSP00000432770.1:p.Ser546Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12722C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1619G>C
  hgvsp: ENSP00000404558.2:p.Ser540Thr
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1897
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18639
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser540Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-133844212-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844212
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844212
    reference: chr 6
allele count: 1
allele frequency: 8.270888127967181e-6
allele num: 120906
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1566C>T
  hgvsp: ENST00000525849.1:c.1566C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1635C>T
  hgvsp: ENST00000355167.3:c.1635C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1473C>T
  hgvsp: ENST00000452339.2:c.1473C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1635C>T
  hgvsp: ENST00000367895.5:c.1635C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1491C>T
  hgvsp: ENST00000430974.2:c.1491C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1635C>T
  hgvsp: ENST00000431403.2:c.1635C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12706G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1653C>T
  hgvsp: ENST00000531901.1:c.1653C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1566C>T
  hgvsp: ENST00000355286.6:c.1566C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20546
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val545Val
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

6-133844221-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844221
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844221
    reference: chr 6
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1644G>A
  hgvsp: ENST00000355167.3:c.1644G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1644G>A
  hgvsp: ENST00000431403.2:c.1644G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12697C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1482G>A
  hgvsp: ENST00000452339.2:c.1482G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1500G>A
  hgvsp: ENST00000430974.2:c.1500G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1575G>A
  hgvsp: ENST00000525849.1:c.1575G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1644G>A
  hgvsp: ENST00000367895.5:c.1644G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1575G>A
  hgvsp: ENST00000355286.6:c.1575G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1662G>A
  hgvsp: ENST00000531901.1:c.1662G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20554
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr548Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

6-133844230-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844230
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844230
    reference: chr 6
allele count: 6
allele frequency: 4.95687518588282e-5
allele num: 121044
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1671A>G
  hgvsp: ENST00000531901.1:c.1671A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1509A>G
  hgvsp: ENST00000430974.2:c.1509A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1653A>G
  hgvsp: ENST00000367895.5:c.1653A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1584A>G
  hgvsp: ENST00000525849.1:c.1584A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1653A>G
  hgvsp: ENST00000431403.2:c.1653A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1491A>G
  hgvsp: ENST00000452339.2:c.1491A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12688T>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1584A>G
  hgvsp: ENST00000355286.6:c.1584A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1653A>G
  hgvsp: ENST00000355167.3:c.1653A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4180
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln551Gln
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

6-133844248-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844248
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844248
    reference: chr 6
allele count: 3
allele frequency: 2.477536997885835e-5
allele num: 121088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1602G>A
  hgvsp: ENST00000525849.1:c.1602G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1671G>A
  hgvsp: ENST00000431403.2:c.1671G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1509G>A
  hgvsp: ENST00000452339.2:c.1509G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1527G>A
  hgvsp: ENST00000430974.2:c.1527G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12670C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1602G>A
  hgvsp: ENST00000355286.6:c.1602G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1689G>A
  hgvsp: ENST00000531901.1:c.1689G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1671G>A
  hgvsp: ENST00000355167.3:c.1671G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1671G>A
  hgvsp: ENST00000367895.5:c.1671G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5012
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala557Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/6-133844257-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844257
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844257
    reference: chr 6
allele count: 1
allele frequency: 8.258593066085262e-6
allele num: 121086
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1611A>C
  hgvsp: ENST00000355286.6:c.1611A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1680A>C
  hgvsp: ENST00000431403.2:c.1680A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1518A>C
  hgvsp: ENST00000452339.2:c.1518A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1698A>C
  hgvsp: ENST00000531901.1:c.1698A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12661T>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1611A>C
  hgvsp: ENST00000525849.1:c.1611A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1680A>C
  hgvsp: ENST00000367895.5:c.1680A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1680A>C
  hgvsp: ENST00000355167.3:c.1680A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1536A>C
  hgvsp: ENST00000430974.2:c.1536A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5013
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18772
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu560Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD

6-133844257-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844257
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844257
    reference: chr 6
allele count: 3
allele frequency: 2.477577919825579e-5
allele num: 121086
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1611A>G
  hgvsp: ENST00000525849.1:c.1611A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1680A>G
  hgvsp: ENST00000355167.3:c.1680A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1680A>G
  hgvsp: ENST00000431403.2:c.1680A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1518A>G
  hgvsp: ENST00000452339.2:c.1518A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1536A>G
  hgvsp: ENST00000430974.2:c.1536A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1611A>G
  hgvsp: ENST00000355286.6:c.1611A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1698A>G
  hgvsp: ENST00000531901.1:c.1698A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1680A>G
  hgvsp: ENST00000367895.5:c.1680A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12661T>C
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4181
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu560Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

6-133844262-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844262
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844262
    reference: chr 6
allele count: 2
allele frequency: 1.651636772041093e-5
allele num: 121092
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1685A>G
  hgvsp: ENSP00000356870.5:p.Tyr562Cys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1541A>G
  hgvsp: ENSP00000388670.2:p.Tyr514Cys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1703A>G
  hgvsp: ENSP00000432770.1:p.Tyr568Cys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1685A>G
  hgvsp: ENSP00000404558.2:p.Tyr562Cys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12656T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1523A>G
  hgvsp: ENSP00000395916.2:p.Tyr508Cys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1616A>G
  hgvsp: ENSP00000347434.6:p.Tyr539Cys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1616A>G
  hgvsp: ENSP00000433219.1:p.Tyr539Cys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1685A>G
  hgvsp: ENSP00000347294.3:p.Tyr562Cys
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12246
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9493
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5405
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5012
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr562Cys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

6-133844274-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844274
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844274
    reference: chr 6
allele count: 2
allele frequency: 1.651664051531918e-5
allele num: 121090
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1628G>A
  hgvsp: ENSP00000433219.1:p.Gly543Asp
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12644C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1715G>A
  hgvsp: ENSP00000432770.1:p.Gly572Asp
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1697G>A
  hgvsp: ENSP00000356870.5:p.Gly566Asp
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1535G>A
  hgvsp: ENSP00000395916.2:p.Gly512Asp
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1553G>A
  hgvsp: ENSP00000388670.2:p.Gly518Asp
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1628G>A
  hgvsp: ENSP00000347434.6:p.Gly543Asp
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1697G>A
  hgvsp: ENSP00000404558.2:p.Gly566Asp
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1697G>A
  hgvsp: ENSP00000347294.3:p.Gly566Asp
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9490
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly566Asp
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

6-133844283-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844283
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844283
    reference: chr 6
allele count: 1
allele frequency: 8.259548037531387e-6
allele num: 121072
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1706C>G
  hgvsp: ENSP00000347294.3:p.Pro569Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1637C>G
  hgvsp: ENSP00000433219.1:p.Pro546Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1637C>G
  hgvsp: ENSP00000347434.6:p.Pro546Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12635G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1724C>G
  hgvsp: ENSP00000432770.1:p.Pro575Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1706C>G
  hgvsp: ENSP00000404558.2:p.Pro569Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1562C>G
  hgvsp: ENSP00000388670.2:p.Pro521Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1544C>G
  hgvsp: ENSP00000395916.2:p.Pro515Arg
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1706C>G
  hgvsp: ENSP00000356870.5:p.Pro569Arg
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3660
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3138
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5003
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro569Arg
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

6-133844312-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844312
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844312
    reference: chr 6
allele count: 3
allele frequency: 2.479830710223515e-5
allele num: 120976
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1666A>G
  hgvsp: ENSP00000347434.6:p.Ile556Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1573A>G
  hgvsp: ENSP00000395916.2:p.Ile525Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1735A>G
  hgvsp: ENSP00000347294.3:p.Ile579Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1591A>G
  hgvsp: ENSP00000388670.2:p.Ile531Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1735A>G
  hgvsp: ENSP00000404558.2:p.Ile579Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12606T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1666A>G
  hgvsp: ENSP00000433219.1:p.Ile556Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1753A>G
  hgvsp: ENSP00000432770.1:p.Ile585Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1735A>G
  hgvsp: ENSP00000356870.5:p.Ile579Val
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2201
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6708
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile579Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

6-133844313-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844313
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844313
    reference: chr 6
allele count: 1
allele frequency: 8.266102367411717e-6
allele num: 120976
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1736T>C
  hgvsp: ENSP00000404558.2:p.Ile579Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1667T>C
  hgvsp: ENSP00000347434.6:p.Ile556Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1754T>C
  hgvsp: ENSP00000432770.1:p.Ile585Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1736T>C
  hgvsp: ENSP00000347294.3:p.Ile579Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1574T>C
  hgvsp: ENSP00000395916.2:p.Ile525Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1667T>C
  hgvsp: ENSP00000433219.1:p.Ile556Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12605A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1592T>C
  hgvsp: ENSP00000388670.2:p.Ile531Thr
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1736T>C
  hgvsp: ENSP00000356870.5:p.Ile579Thr
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20364
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5400
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile579Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD

6-133844320-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844320
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844320
    reference: chr 6
allele count: 1
allele frequency: 8.268289456277286e-6
allele num: 120944
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1669+5G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1756+5G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1738+5G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1669+5G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1738+5G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1594+5G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1738+5G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12598C>G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1576+5G>C
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1738+5G>C
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

6-133844333-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844333
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844333
    reference: chr 6
allele count: 1
allele frequency: 8.274720728175424e-6
allele num: 120850
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1669+18A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1738+18A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1576+18A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1669+18A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1738+18A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1738+18A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1756+18A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1594+18A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12585T>C
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9475
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17079
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3122
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2201
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

6-133844339-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844339
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844339
    reference: chr 6
allele count: 1
allele frequency: 8.27787159365584e-6
allele num: 120804
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1738+24G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1738+24G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1594+24G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1738+24G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1756+24G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1576+24G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12579C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1669+24G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1669+24G>A
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3146
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17932
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

6-133844339-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844339
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844339
    reference: chr 6
allele count: 1458
allele frequency: 1.206913678355021e-2
allele num: 120804
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1738+24G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1669+24G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12579C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1576+24G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1756+24G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1669+24G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1738+24G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1594+24G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1738+24G>C
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 9.75e1
  variant carriers: 643
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 4.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 5.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 5.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 9298
  bin: 3.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 5316
  bin: 3.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 4.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 19666
  bin: 2.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 11922
  bin: 2.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 6.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 7.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 6.75e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3146
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 104
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

6-133844340-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844340
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844340
    reference: chr 6
allele count: 2
allele frequency: 1.655190677966102e-5
allele num: 120832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1738+25T>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1738+25T>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1669+25T>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1756+25T>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12578A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1738+25T>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1669+25T>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1594+25T>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1576+25T>A
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5315
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

6-133844341-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844341
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844341
    reference: chr 6
allele count: 1
allele frequency: 8.277460475126231e-6
allele num: 120810
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1738+26A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1576+26A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1669+26A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1669+26A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1594+26A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1738+26A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12577T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1738+26A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1756+26A>G
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2163
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

6-133844352-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844352
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844352
    reference: chr 6
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1738+37C>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1669+37C>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1576+37C>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1594+37C>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12566G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1756+37C>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1669+37C>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1738+37C>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1738+37C>G
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2160
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-133844355-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844355
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844355
    reference: chr 6
allele count: 1
allele frequency: 8.28349430923941e-6
allele num: 120722
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1756+40C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1669+40C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1669+40C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1738+40C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1576+40C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1738+40C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1738+40C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12563G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1594+40C>T
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11899
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4930
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

6-133844362-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844362
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844362
    reference: chr 6
allele count: 9
allele frequency: 7.461201750895344e-5
allele num: 120624
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1594+47G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1576+47G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1738+47G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1738+47G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12556C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1669+47G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1669+47G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1738+47G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1756+47G>A
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11815
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4921
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

6-133844362-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133844362
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133844362
    reference: chr 6
allele count: 1
allele frequency: 8.290224167661493e-6
allele num: 120624
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1756+47G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1576+47G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1669+47G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1669+47G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1738+47G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1738+47G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1738+47G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+12556C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1594+47G>C
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3163
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

6-133846102-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846102
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846102
    reference: chr 6
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1739-51T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10816A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-190T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1670-51T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1595-51T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-190T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-190T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1739-51T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1577-51T>C
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6087
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29850
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2277
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ

6-133846123-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846123
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846123
    reference: chr 6
allele count: 1
allele frequency: 8.254502831294471e-6
allele num: 121146
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10795A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1739-30T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1670-30T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-169T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1577-30T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-169T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1739-30T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-169T>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1595-30T>C
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6097
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2256
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

6-133846125-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846125
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846125
    reference: chr 6
allele count: 1
allele frequency: 8.253957772752034e-6
allele num: 121154
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10793C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1595-28G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-167G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-167G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1739-28G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-167G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1670-28G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1577-28G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1739-28G>A
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11865
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6098
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2257
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30478
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

6-133846125-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846125
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846125
    reference: chr 6
allele count: 2
allele frequency: 1.650791554550407e-5
allele num: 121154
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-167G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1739-28G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-167G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1577-28G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1739-28G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1670-28G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10793C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1595-28G>C
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-167G>C
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11865
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6098
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7699
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

6-133846126-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846126
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846126
    reference: chr 6
allele count: 3718
allele frequency: 3.127418323744154e-2
allele num: 118884
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1739-27A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1670-27A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-166A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1577-27A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1595-27A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-166A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-166A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10792T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1739-27A>G
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 4.25e1
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 11964
  bin: 3.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 5.25e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.75e1
  variant carriers: 224
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 6.75e1
  variant carriers: 202
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6577
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 6.25e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 8.25e1
  variant carriers: 245
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 8.75e1
  variant carriers: 210
genotype depth: GenotypeDepth
  all individuals: 23874
  bin: 2.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 9.25e1
  variant carriers: 224
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 7.25e1
  variant carriers: 207
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 4.75e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 5382
  bin: 9.75e1
  variant carriers: 1491
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 3.75e1
  variant carriers: 105
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 8.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 8
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

6-133846127-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846127
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846127
    reference: chr 6
allele count: 2
allele frequency: 1.651254953764861e-5
allele num: 121120
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-165A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-165A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1739-26A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1577-26A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1670-26A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1739-26A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1595-26A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10791T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-165A>G
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4401
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6745
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12639
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: A
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

6-133846131-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846131
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846131
    reference: chr 6
allele count: 4
allele frequency: 3.30392837083292e-5
allele num: 121068
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1739-22T>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1670-22T>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-161T>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-161T>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10787A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1739-22T>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1577-22T>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-161T>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1595-22T>A
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24578
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4404
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2305
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30987
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum

6-133846133-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846133
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846133
    reference: chr 6
allele count: 1
allele frequency: 8.255184255712587e-6
allele num: 121136
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10785T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-159A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-159A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1577-20A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1739-20A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1670-20A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-159A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1739-20A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1595-20A>G
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1917
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

6-133846138-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846138
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846138
    reference: chr 6
allele count: 1
allele frequency: 8.254502831294471e-6
allele num: 121146
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-154T>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10780A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1739-15T>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1577-15T>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-154T>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1670-15T>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-154T>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1595-15T>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1739-15T>G
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 24601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4404
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

6-133846141-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846141
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846141
    reference: chr 6
allele count: 1
allele frequency: 8.253412786187088e-6
allele num: 121162
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1670-12A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-151A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-151A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1739-12A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1595-12A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1739-12A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-151A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10777T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1577-12A>G
  variant of: http://identifiers.org/hgnc/3522
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4403
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7799
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31130
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD

6-133846160-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846160
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846160
    reference: chr 6
allele count: 22
allele frequency: 1.814702388808236e-4
allele num: 121232
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1746A>G
  hgvsp: ENST00000431403.2:c.1746A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-132A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-132A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-132A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1584A>G
  hgvsp: ENST00000452339.2:c.1584A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10758T>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1602A>G
  hgvsp: ENST00000430974.2:c.1602A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1746A>G
  hgvsp: ENST00000355167.3:c.1746A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1677A>G
  hgvsp: ENST00000525849.1:c.1677A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3522
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4418
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12599
  bin: 9.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu528Glu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum

6-133846162-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846162
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846162
    reference: chr 6
allele count: 2
allele frequency: 1.649702228747711e-5
allele num: 121234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1586G>A
  hgvsp: ENSP00000395916.2:p.Ser529Asn
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10756C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1748G>A
  hgvsp: ENSP00000347294.3:p.Ser583Asn
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1679G>A
  hgvsp: ENSP00000433219.1:p.Ser560Asn
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1604G>A
  hgvsp: ENSP00000388670.2:p.Ser535Asn
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-130G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1748G>A
  hgvsp: ENSP00000404558.2:p.Ser583Asn
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-130G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-130G>A
  variant of: http://identifiers.org/hgnc/3522
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4404
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31201
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser529Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

6-133846173-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846173
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846173
    reference: chr 6
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-119C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-119C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1615C>T
  hgvsp: ENSP00000388670.2:p.Arg539Cys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1597C>T
  hgvsp: ENSP00000395916.2:p.Arg533Cys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1759C>T
  hgvsp: ENSP00000347294.3:p.Arg587Cys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1690C>T
  hgvsp: ENSP00000433219.1:p.Arg564Cys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1759C>T
  hgvsp: ENSP00000404558.2:p.Arg587Cys
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-119C>T
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10745G>A
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4404
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6891
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7809
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg533Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

6-133846174-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846174
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846174
    reference: chr 6
allele count: 6
allele frequency: 4.948371985616732e-5
allele num: 121252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1691G>A
  hgvsp: ENSP00000433219.1:p.Arg564His
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1760G>A
  hgvsp: ENSP00000347294.3:p.Arg587His
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10744C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-118G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1598G>A
  hgvsp: ENSP00000395916.2:p.Arg533His
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-118G>A
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1760G>A
  hgvsp: ENSP00000404558.2:p.Arg587His
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1616G>A
  hgvsp: ENSP00000388670.2:p.Arg539His
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-118G>A
  variant of: http://identifiers.org/hgnc/3522
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg533His
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP

6-133846176-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133846176
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 133846176
    reference: chr 6
allele count: 1
allele frequency: 8.247422680412371e-6
allele num: 121250
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000433219
  ensembl transcript: ENST00000525849
  gene symbol: EYA4
  hgvsc: ENST00000525849.1:c.1693A>G
  hgvsp: ENSP00000433219.1:p.Ile565Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000356870
  ensembl transcript: ENST00000367895
  gene symbol: EYA4
  hgvsc: ENST00000367895.5:c.1739-116A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347294
  ensembl transcript: ENST00000355167
  gene symbol: EYA4
  hgvsc: ENST00000355167.3:c.1762A>G
  hgvsp: ENSP00000347294.3:p.Ile588Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000347434
  ensembl transcript: ENST00000355286
  gene symbol: EYA4
  hgvsc: ENST00000355286.6:c.1670-116A>G
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000395916
  ensembl transcript: ENST00000452339
  gene symbol: EYA4
  hgvsc: ENST00000452339.2:c.1600A>G
  hgvsp: ENSP00000395916.2:p.Ile534Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000227954
  ensembl transcript: ENST00000607033
  gene symbol: RP3-323P13.2
  hgvsc: ENST00000607033.1:n.2261+10742T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000404558
  ensembl transcript: ENST00000431403
  gene symbol: EYA4
  hgvsc: ENST00000431403.2:c.1762A>G
  hgvsp: ENSP00000404558.2:p.Ile588Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000388670
  ensembl transcript: ENST00000430974
  gene symbol: EYA4
  hgvsc: ENST00000430974.2:c.1618A>G
  hgvsp: ENSP00000388670.2:p.Ile540Val
  variant of: http://identifiers.org/hgnc/3522
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000112319
  ensembl protein: ENSP00000432770
  ensembl transcript: ENST00000531901
  gene symbol: EYA4
  hgvsc: ENST00000531901.1:c.1757-116A>G
  variant of: http://identifiers.org/hgnc/3522
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4403
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24648
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile534Val
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9103
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32810
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3513
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4106
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1907
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2070
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-1

FS
type: SiteQuality
SIO_000300: 2.508e0

DP
type: SiteQuality
SIO_000300: 2.918889e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: 3.27e-1

QD
type: SiteQuality
SIO_000300: 1.302e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.098e0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9115
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2072
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4111
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3512
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32813
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.825e0

FS
type: SiteQuality
SIO_000300: 3.938e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -5.229e-1

DP
type: SiteQuality
SIO_000300: 2.919211e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.56e-1

QD
type: SiteQuality
SIO_000300: 2.007e1

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3485
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32813
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 9119
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3659
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2071
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1908
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4109
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.239341085271318e-4
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 5.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

MQ
type: SiteQuality
SIO_000300: 5.957e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.606e0

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

DP
type: SiteQuality
SIO_000300: 2.92017e6

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4109
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2071
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3485
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1908
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9119
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3659
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.606e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

FS
type: SiteQuality
SIO_000300: 5.74e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

DP
type: SiteQuality
SIO_000300: 2.92017e6

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4109
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3667
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9121
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3512
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3484
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2072
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.801e0

DP
type: SiteQuality
SIO_000300: 2.919793e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.51e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4107
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1908
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3511
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3484
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9125
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2071
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495190146543199e-5
allele num: 66738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.132e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: -9.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.96e-1

DP
type: SiteQuality
SIO_000300: 2.91985e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.47e-1

FS
type: SiteQuality
SIO_000300: 1.814e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9124
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4109
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1908
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32814
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3511
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3665
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.919512e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.55e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.277e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.58e0

VQSLOD
type: SiteQuality
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FS
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Other
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InbreedingCoeff
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DP
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BaseQRankSum
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FS
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MQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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South Asian
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Other
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Latino
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European (Non-Finnish)
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VQSLOD
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QD
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DP
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BaseQRankSum
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MQ
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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South Asian
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East Asian
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Latino
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Other
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European (Finnish)
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QD
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ClippingRankSum
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DP
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InbreedingCoeff
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VQSLOD
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MQ
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ReadPosRankSum
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MQRankSum
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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Latino
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BaseQRankSum
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DP
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ClippingRankSum
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MQRankSum
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QD
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InbreedingCoeff
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MQ
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FS
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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Other
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European (Finnish)
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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FS
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MQRankSum
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MQ
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Other
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African
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Latino
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European (Finnish)
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South Asian
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QD
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MQ
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MQRankSum
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DP
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FS
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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South Asian
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Latino
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Other
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European (Finnish)
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East Asian
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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MQ
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DP
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VQSLOD
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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East Asian
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European (Non-Finnish)
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African
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European (Finnish)
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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VQSLOD
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FS
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BaseQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 4026
bin: 6.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.913401e6

VQSLOD
type: SiteQuality
SIO_000300: 9.07e-1

QD
type: SiteQuality
SIO_000300: 1.402e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.09e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.62e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 12

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 1.044022968505307e-3
allele num: 11494
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.913401e6

VQSLOD
type: SiteQuality
SIO_000300: 9.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

QD
type: SiteQuality
SIO_000300: 1.402e1

MQRankSum
type: SiteQuality
SIO_000300: -5.25e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.62e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.498275396658768e-5
allele num: 66682
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.21e-1

DP
type: SiteQuality
SIO_000300: 2.91294e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.462e0

VQSLOD
type: SiteQuality
SIO_000300: 4.67e0

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.254e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499700059988002e-5
allele num: 66680
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.61e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.424e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.57e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.69e-1

DP
type: SiteQuality
SIO_000300: 2.909944e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.28e1

MQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.43e0

VQSLOD
type: SiteQuality
SIO_000300: 5.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.908278e6

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-2

QD
type: SiteQuality
SIO_000300: 1.533e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 6.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

DP
type: SiteQuality
SIO_000300: 2.902127e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.158e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.7e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9734
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65000
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

FS
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.37e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.29e-1

QD
type: SiteQuality
SIO_000300: 1.73e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9734
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538130248869474e-5
allele num: 65014
num of homozygotes: 0

Other
type: Population
allele count: 0
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MQRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.82e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.358e0

QD
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 1
allele frequency: 6.118453255017132e-5
allele num: 16344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11250
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
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FS
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InbreedingCoeff
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MQRankSum
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.272e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16839
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5984
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.666192676857448e-4
allele num: 11252
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.88e0

QD
type: SiteQuality
SIO_000300: 1.696e1

MQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.569e0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e-1

DP
type: SiteQuality
SIO_000300: 1.925854e6

GenotypeQuality
all individuals: 1025
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2038
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variant carriers: 0

GenotypeQuality
all individuals: 3887
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.885729518393461e-5
allele num: 11254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.818e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

DP
type: SiteQuality
SIO_000300: 1.935213e6

VQSLOD
type: SiteQuality
SIO_000300: -3.662e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.871e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 1.794e1

MQRankSum
type: SiteQuality
SIO_000300: 4.52e-1

GenotypeQuality
all individuals: 597
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16917
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variant carriers: 1

GenotypeQuality
all individuals: 4036
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.118568232662192e-3
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.426e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.75e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.75e-1

DP
type: SiteQuality
SIO_000300: 1.956516e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

GenotypeQuality
all individuals: 165
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3999
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3056
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16897
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9918
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.104260774020266e-5
allele num: 16382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.515e0

MQ
type: SiteQuality
SIO_000300: 5.864e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

QD
type: SiteQuality
SIO_000300: 1.072e1

VQSLOD
type: SiteQuality
SIO_000300: -1.259e0

DP
type: SiteQuality
SIO_000300: 1.96354e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.725e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
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variant carriers: 0

GenotypeQuality
all individuals: 143
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 113
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GenotypeQuality
all individuals: 3047
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variant carriers: 0

GenotypeQuality
all individuals: 96
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variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.100536847242558e-5
allele num: 16392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10018
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65738
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

FS
type: SiteQuality
SIO_000300: 1.093e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.532e0

QD
type: SiteQuality
SIO_000300: 1.003e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.974257e6

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.65e0

VQSLOD
type: SiteQuality
SIO_000300: -2.777e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e0

GenotypeQuality
all individuals: 3076
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 18147
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4907
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variant carriers: 0

GenotypeQuality
all individuals: 3136
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variant carriers: 0

GenotypeQuality
all individuals: 4106
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16949
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515748628247491e-5
allele num: 65974
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.53e-1

DP
type: SiteQuality
SIO_000300: 1.984654e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

QD
type: SiteQuality
SIO_000300: 1.383e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.99e-1

FS
type: SiteQuality
SIO_000300: 2.122e0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3174
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
all individuals: 16999
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.215657670799903e-4
allele num: 16452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66204
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0468e1

DP
type: SiteQuality
SIO_000300: 1.990095e6

VQSLOD
type: SiteQuality
SIO_000300: 6.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.11e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

QD
type: SiteQuality
SIO_000300: 1.029e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
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GenotypeQuality
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bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 90
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variant carriers: 0

GenotypeQuality
all individuals: 42
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GenotypeQuality
all individuals: 31
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GenotypeQuality
all individuals: 3181
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 483
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variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.020509257860875e-5
allele num: 66214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 5.530973451327434e-3
allele num: 904
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 12
allele frequency: 1.828710758914965e-3
allele num: 6562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.93e0

FS
type: SiteQuality
SIO_000300: 6.870000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

QD
type: SiteQuality
SIO_000300: 1.377e1

DP
type: SiteQuality
SIO_000300: 1.992529e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.56e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.163e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 21

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 81
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 36
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 45
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GenotypeQuality
all individuals: 4979
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GenotypeQuality
all individuals: 4161
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6681
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.168376584188292e-4
allele num: 66280
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

South Asian
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European (Finnish)
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InbreedingCoeff
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ReadPosRankSum
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QD
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ClippingRankSum
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MQ
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BaseQRankSum
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DP
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VQSLOD
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MQRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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South Asian
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Latino
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East Asian
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DP
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FS
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MQRankSum
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VQSLOD
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MQ
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BaseQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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Other
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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FS
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ClippingRankSum
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MQ
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MQRankSum
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BaseQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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East Asian
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European (Non-Finnish)
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allele num: 66584
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Latino
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South Asian
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VQSLOD
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FS
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InbreedingCoeff
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DP
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BaseQRankSum
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MQ
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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Other
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European (Non-Finnish)
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East Asian
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European (Finnish)
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South Asian
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QD
type: SiteQuality
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ReadPosRankSum
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DP
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FS
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MQRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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Other
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European (Non-Finnish)
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African
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Latino
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ReadPosRankSum
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DP
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FS
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQ
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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Latino
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African
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European (Non-Finnish)
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East Asian
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQ
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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Latino
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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QD
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MQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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South Asian
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East Asian
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InbreedingCoeff
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SIO_000300: -1.0e-4

QD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.68e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.08e-1

BaseQRankSum
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SIO_000300: 1.68e0

FS
type: SiteQuality
SIO_000300: 2.786e0

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 2.00464e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.212415130940834e-4
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
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East Asian
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allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 2.004589e6

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.5e-2

BaseQRankSum
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MQ
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MQRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.23e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-2

QD
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DP
type: SiteQuality
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MQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.899e1

FS
type: SiteQuality
SIO_000300: 2.449e0

BaseQRankSum
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SIO_000300: 1.57e0

VQSLOD
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SIO_000300: -2.417e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.63e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.505045651129265e-5
allele num: 66592
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.954e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.62e0

VQSLOD
type: SiteQuality
SIO_000300: 8.77e-1

DP
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SIO_000300: 2.002344e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
SIO_000300: 1.192e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501726986033939e-5
allele num: 66590
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-2

MQ
type: SiteQuality
SIO_000300: 5.932e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.95e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.522e0

DP
type: SiteQuality
SIO_000300: 2.002317e6

VQSLOD
type: SiteQuality
SIO_000300: -3.441e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501997656883655e-5
allele num: 66578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.1e-1

ReadPosRankSum
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FS
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.0e-4

QD
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.56e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

DP
type: SiteQuality
SIO_000300: 2.001479e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66522
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele count: 0
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South Asian
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allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-2

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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QD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.17e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503714174009804e-5
allele num: 66502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
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South Asian
type: Population
allele count: 0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.25e-1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 3.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.209e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.75e-1

FS
type: SiteQuality
SIO_000300: 1.228e0

MQRankSum
type: SiteQuality
SIO_000300: 2.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

DP
type: SiteQuality
SIO_000300: 2.080407e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1344

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 3.60891401762353e-4
allele num: 66502
num of homozygotes: 0

African
type: Population
allele count: 1347
allele frequency: 1.302456004641269e-1
allele num: 10342
num of homozygotes: 104

Latino
type: Population
allele count: 77
allele frequency: 6.749649368863955e-3
allele num: 11408
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 6
allele frequency: 6.622516556291391e-3
allele num: 906
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South Asian
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allele count: 4
allele frequency: 2.426889940541196e-4
allele num: 16482
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.25e-1

FS
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.969e1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.209e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.537e1

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503171692270691e-5
allele num: 66526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.32e-1

FS
type: SiteQuality
SIO_000300: 7.314e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

DP
type: SiteQuality
SIO_000300: 2.051705e6

QD
type: SiteQuality
SIO_000300: 1.449e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.22e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.878e1

VQSLOD
type: SiteQuality
SIO_000300: -5.174e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e-1

FS
type: SiteQuality
SIO_000300: 4.269e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.48e0

QD
type: SiteQuality
SIO_000300: 1.198e1

MQRankSum
type: SiteQuality
SIO_000300: 4.14e-1

DP
type: SiteQuality
SIO_000300: 2.051645e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070171178827243e-5
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.049365e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.516e0

MQRankSum
type: SiteQuality
SIO_000300: -3.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.639999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.429e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504528631179851e-5
allele num: 66466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.364e0

FS
type: SiteQuality
SIO_000300: 8.255000000000001e0

DP
type: SiteQuality
SIO_000300: 2.048928e6

MQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

QD
type: SiteQuality
SIO_000300: 1.035e1

VQSLOD
type: SiteQuality
SIO_000300: -1.246e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 9
allele frequency: 8.7497569511958e-4
allele num: 10286
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

QD
type: SiteQuality
SIO_000300: 1.346e1

MQRankSum
type: SiteQuality
SIO_000300: 7.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.26e0

DP
type: SiteQuality
SIO_000300: 2.048533e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 7.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.308e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169864295741694e-4
allele num: 8548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

DP
type: SiteQuality
SIO_000300: 2.048533e6

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.308e0

MQRankSum
type: SiteQuality
SIO_000300: 7.5e-2

FS
type: SiteQuality
SIO_000300: 7.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

QD
type: SiteQuality
SIO_000300: 1.346e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.05e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.07e0

ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 2.338e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.98e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

QD
type: SiteQuality
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BaseQRankSum
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DP
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ClippingRankSum
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FS
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MQ
type: SiteQuality
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InbreedingCoeff
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-1

FS
type: SiteQuality
SIO_000300: 1.512e0

QD
type: SiteQuality
SIO_000300: 1.095e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

DP
type: SiteQuality
SIO_000300: 2.632318e6

MQRankSum
type: SiteQuality
SIO_000300: 2.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.257e0

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13175
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.095e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.257e0

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

FS
type: SiteQuality
SIO_000300: 1.512e0

MQRankSum
type: SiteQuality
SIO_000300: 2.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

DP
type: SiteQuality
SIO_000300: 2.632318e6

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 22

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1711
bin: 8.25e1
variant carriers: 17

GenotypeQuality
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bin: 9.75e1
variant carriers: 3430

GenotypeQuality
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bin: 1.25e1
variant carriers: 7

GenotypeQuality
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bin: 9.25e1
variant carriers: 32

GenotypeQuality
all individuals: 2781
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variant carriers: 21

GenotypeQuality
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bin: 4.75e1
variant carriers: 23

GenotypeQuality
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bin: 3.75e1
variant carriers: 13

GenotypeQuality
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variant carriers: 18

GenotypeQuality
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variant carriers: 18

GenotypeQuality
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variant carriers: 25

GenotypeQuality
all individuals: 83
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variant carriers: 6

GenotypeQuality
all individuals: 29926
bin: 6.25e1
variant carriers: 22

South Asian
type: Population
allele count: 9
allele frequency: 5.453884377651194e-4
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 699
allele frequency: 6.967703349282296e-2
allele num: 10032
num of homozygotes: 0

East Asian
type: Population
allele count: 80
allele frequency: 9.328358208955223e-3
allele num: 8576
num of homozygotes: 0

Latino
type: Population
allele count: 60
allele frequency: 5.299417064122946e-3
allele num: 11322
num of homozygotes: 0

Other
type: Population
allele count: 55
allele frequency: 6.165919282511211e-2
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 609
allele frequency: 9.527534418022528e-2
allele num: 6392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2206
allele frequency: 3.385096980112939e-2
allele num: 65168
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.911e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.45e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.51e0

FS
type: SiteQuality
SIO_000300: 1.45784e2

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

QD
type: SiteQuality
SIO_000300: 3.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.35e0

VQSLOD
type: SiteQuality
SIO_000300: -1.01e2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.075e0

DP
type: SiteQuality
SIO_000300: 2.556109e6

GenotypeQuality
all individuals: 2999
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30941
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 31
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GenotypeQuality
all individuals: 738
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GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 33
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GenotypeQuality
all individuals: 2308
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variant carriers: 0

GenotypeQuality
all individuals: 1914
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 7789
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.20216e2

DP
type: SiteQuality
SIO_000300: 2.426789e6

MQ
type: SiteQuality
SIO_000300: 5.871e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.708e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.961e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.279e0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 2998
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variant carriers: 0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 7786
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variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 738
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variant carriers: 0

GenotypeQuality
all individuals: 972
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variant carriers: 0

GenotypeQuality
all individuals: 12585
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1913
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.5220700152207e-4
allele num: 6570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923816852635629e-4
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501095799933952e-5
allele num: 66618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.29e-1

FS
type: SiteQuality
SIO_000300: 2.6593e1

VQSLOD
type: SiteQuality
SIO_000300: -4.305e0

MQ
type: SiteQuality
SIO_000300: 5.932e1

QD
type: SiteQuality
SIO_000300: 2.81e0

DP
type: SiteQuality
SIO_000300: 2.426436e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.123e0

GenotypeQuality
all individuals: 12607
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 975
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GenotypeQuality
all individuals: 90
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 2310
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 7796
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variant carriers: 0

GenotypeQuality
all individuals: 31065
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variant carriers: 0

GenotypeQuality
all individuals: 3002
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.517e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 2.425983e6

MQRankSum
type: SiteQuality
SIO_000300: -5.52e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

VQSLOD
type: SiteQuality
SIO_000300: 3.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.029e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e0

QD
type: SiteQuality
SIO_000300: 1.213e1

GenotypeQuality
all individuals: 91
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 1917
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variant carriers: 0

GenotypeQuality
all individuals: 7796
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variant carriers: 0

GenotypeQuality
all individuals: 31098
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variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.516530178950561e-4
allele num: 6594
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.032e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.958e1

MQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

DP
type: SiteQuality
SIO_000300: 2.426303e6

VQSLOD
type: SiteQuality
SIO_000300: -2.784e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

QD
type: SiteQuality
SIO_000300: 2.8e0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 976
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3002
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 735
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12603
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1917
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.918e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.385e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.561e0

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

FS
type: SiteQuality
SIO_000300: 5.104e0

DP
type: SiteQuality
SIO_000300: 2.426522e6

QD
type: SiteQuality
SIO_000300: 9.32e0

VQSLOD
type: SiteQuality
SIO_000300: -1.168e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2304
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variant carriers: 0

GenotypeQuality
all individuals: 1918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 22
allele frequency: 2.542764678687009e-3
allele num: 8652
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.428157e6

FS
type: SiteQuality
SIO_000300: 5.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

MQRankSum
type: SiteQuality
SIO_000300: -6.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.82e-2

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
SIO_000300: 1.398e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.03e-1

GenotypeQuality
all individuals: 2305
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1919
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
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GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7813
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3008
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12579
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.712319219376198e-5
allele num: 11478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.48e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

FS
type: SiteQuality
SIO_000300: 2.375e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.758e-1

QD
type: SiteQuality
SIO_000300: 1.396e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.724e0

DP
type: SiteQuality
SIO_000300: 2.426481e6

GenotypeQuality
all individuals: 12577
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31209
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2307
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3007
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.148e0

MQRankSum
type: SiteQuality
SIO_000300: -2.022e0

QD
type: SiteQuality
SIO_000300: 9.460000000000001e0

FS
type: SiteQuality
SIO_000300: 2.672e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.029e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.341e0

DP
type: SiteQuality
SIO_000300: 2.426555e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.942e1

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3007
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31212
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12577
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7807
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.99658129910634e-5
allele num: 66692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.57e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

QD
type: SiteQuality
SIO_000300: 1.2e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

FS
type: SiteQuality
SIO_000300: 5.24e-1

DP
type: SiteQuality
SIO_000300: 2.426811e6