5-110082014-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110082014
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110082014
    reference: chr 5
allele count: 1614
allele frequency: 1.33243073671697e-2
allele num: 121132
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-58C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.-10C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.429C>T
  hgvsp: ENST00000447245.2:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.156C>T
  hgvsp: ENST00000509442.2:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.429C>T
  hgvsp: ENST00000355943.3:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.745C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.258C>T
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 6.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 18410
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 6.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 3541
  bin: 4.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 5565
  bin: 3.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 9.75e1
  variant carriers: 799
genotype depth: GenotypeDepth
  all individuals: 9500
  bin: 3.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 5.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 5.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 4.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 15183
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.25e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3470
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6431
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14357
  bin: 9.75e1
  variant carriers: 1540
genotype quality: GenotypeQuality
  all individuals: 2843
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4160
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val143Val
num of homozygotes: 68
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/5-110082017-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110082017
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110082017
    reference: chr 5
allele count: 2
allele frequency: 1.651364026686043e-5
allele num: 121112
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.-7C>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.159C>A
  hgvsp: ENST00000509442.2:c.159C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.432C>A
  hgvsp: ENST00000355943.3:c.432C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.432C>A
  hgvsp: ENST00000447245.2:c.432C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.261C>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.748C>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-55C>A
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6579
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3551
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25346
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2630
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1798
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile144Ile
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff

5-110082021-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110082021
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110082021
    reference: chr 5
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-51A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.163A>G
  hgvsp: ENSP00000424136.2:p.Ile55Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.436A>G
  hgvsp: ENSP00000348211.3:p.Ile146Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.265A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.436A>G
  hgvsp: ENSP00000399717.2:p.Ile146Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.-3A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.752A>G
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5706
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18492
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13358
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1799
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3550
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile146Val
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

5-110082031-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110082031
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110082031
    reference: chr 5
allele count: 4
allele frequency: 3.304965710980749e-5
allele num: 121030
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.8G>T
  hgvsp: ENSP00000425708.1:p.Ser3Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.762G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-41G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.275G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.446G>T
  hgvsp: ENSP00000348211.3:p.Ser149Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.446G>T
  hgvsp: ENSP00000399717.2:p.Ser149Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.173G>T
  hgvsp: ENSP00000424136.2:p.Ser58Ile
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15534
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9758
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3549
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13359
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser149Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

5-110082037-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110082037
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110082037
    reference: chr 5
allele count: 1
allele frequency: 8.268152729317216e-6
allele num: 120946
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.179A>G
  hgvsp: ENSP00000424136.2:p.Asn60Ser
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.14A>G
  hgvsp: ENSP00000425708.1:p.Asn5Ser
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.768A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.452A>G
  hgvsp: ENSP00000348211.3:p.Asn151Ser
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-35A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.281A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.452A>G
  hgvsp: ENSP00000399717.2:p.Asn151Ser
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5704
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25127
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2898
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3548
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asn151Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

5-110082039-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110082039
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110082039
    reference: chr 5
allele count: 1
allele frequency: 8.271435424903638e-6
allele num: 120898
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.16A>G
  hgvsp: ENSP00000425708.1:p.Lys6Glu
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.454A>G
  hgvsp: ENSP00000399717.2:p.Lys152Glu
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.181A>G
  hgvsp: ENSP00000424136.2:p.Lys61Glu
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.770A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-33A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.454A>G
  hgvsp: ENSP00000348211.3:p.Lys152Glu
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.283A>G
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2897
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25054
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4239
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2630
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Lys152Glu
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-110082043-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110082043
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110082043
    reference: chr 5
allele count: 1
allele frequency: 8.277460475126231e-6
allele num: 120810
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.774C>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-29C>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.458C>A
  hgvsp: ENSP00000399717.2:p.Thr153Asn
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.458C>A
  hgvsp: ENSP00000348211.3:p.Thr153Asn
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.20C>A
  hgvsp: ENSP00000425708.1:p.Thr7Asn
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.287C>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.185C>A
  hgvsp: ENSP00000424136.2:p.Thr62Asn
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3546
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4239
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr153Asn
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD

5-110082059-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110082059
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110082059
    reference: chr 5
allele count: 1
allele frequency: 8.310203267571925e-6
allele num: 120334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.778+12G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.24+12G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.462+12G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.189+12G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.462+12G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.291+12G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-25+12G>T
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13351
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6338
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4209
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23569
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1115
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1793
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/5-110082070-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110082070
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110082070
    reference: chr 5
allele count: 1
allele frequency: 8.335000333400014e-6
allele num: 119976
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.778+23A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.291+23A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.24+23A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.462+23A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.189+23A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-25+23A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.462+23A>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2624
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13349
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4170
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

5-110082072-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110082072
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110082072
    reference: chr 5
allele count: 1
allele frequency: 8.342370901810295e-6
allele num: 119870
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.778+25T>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.24+25T>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.462+25T>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.462+25T>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-25+25T>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.189+25T>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.291+25T>G
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4162
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6092
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20666
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

5-110082076-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110082076
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110082076
    reference: chr 5
allele count: 71
allele frequency: 5.928226708748727e-4
allele num: 119766
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.291+29G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-25+29G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.462+29G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.24+29G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.462+29G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.189+29G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.778+29G>A
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15871
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9054
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 13664
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5659
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4154
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1838
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20374
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1791
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

5-110082083-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110082083
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110082083
    reference: chr 5
allele count: 2
allele frequency: 1.67319211591875e-5
allele num: 119532
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-25+36A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.189+36A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.462+36A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.291+36A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.24+36A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.778+36A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.462+36A>G
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5661
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8907
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3820
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2794
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4139
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1575
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

5-110082099-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110082099
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110082099
    reference: chr 5
allele count: 1
allele frequency: 8.432556413802408e-6
allele num: 118588
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.24+52T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.778+52T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.189+52T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-25+52T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.462+52T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.291+52T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.462+52T>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13831
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1793
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3043
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10082
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5422
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

5-110083820-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083820
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083820
    reference: chr 5
allele count: 1
allele frequency: 8.454085859695991e-6
allele num: 118286
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.463-44G>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.779-44G>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.25-44G>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.463-44G>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.292-44G>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.190-44G>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-24-44G>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3286
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1285
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22906
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1877
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2796
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

5-110083827-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083827
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083827
    reference: chr 5
allele count: 1
allele frequency: 8.429428821903027e-6
allele num: 118632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.25-37G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.463-37G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.779-37G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.190-37G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.463-37G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-24-37G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.292-37G>T
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19496
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26611
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7177
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8105
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-110083832-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083832
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083832
    reference: chr 5
allele count: 1
allele frequency: 8.408590215764425e-6
allele num: 118926
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.779-32A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.25-32A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.463-32A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.463-32A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.190-32A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.292-32A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-24-32A>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8100
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2824
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2469
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

5-110083839-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083839
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083839
    reference: chr 5
allele count: 1
allele frequency: 8.36638053645232e-6
allele num: 119526
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.25-25A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.463-25A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.190-25A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.463-25A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.779-25A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-24-25A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.292-25A>G
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16477
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22058
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8112
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2842
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7444
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

5-110083840-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083840
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083840
    reference: chr 5
allele count: 2
allele frequency: 1.672884219683156e-5
allele num: 119554
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.292-24T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.190-24T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.463-24T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.25-24T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.779-24T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-24-24T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.463-24T>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2844
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/5-110083858-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083858
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083858
    reference: chr 5
allele count: 1
allele frequency: 8.280064915708939e-6
allele num: 120772
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.463-6A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.463-6A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-24-6A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.779-6A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.190-6A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.292-6A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.25-6A>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32941
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3615
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2461
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8116
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7583
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
hgvs: c.463-6A>C
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

5-110083858-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083858
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083857
    reference: chr 5
allele count: 2
allele frequency: 1.656012983141788e-5
allele num: 120772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.463-3delT
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.779-3delT
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.190-3delT
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.25-3delT
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.463-3delT
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.292-3delT
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-24-3delT
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2461
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32941
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7583
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3615
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 9.25e1
  variant carriers: 0
hgvs: c.463-3delT
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: AT
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-110083866-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083866
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083866
    reference: chr 5
allele count: 1
allele frequency: 8.258729477057249e-6
allele num: 121084
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.465A>C
  hgvsp: ENST00000355943.3:c.465A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.192A>C
  hgvsp: ENST00000509442.2:c.192A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.781A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.465A>C
  hgvsp: ENST00000447245.2:c.465A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.27A>C
  hgvsp: ENST00000504098.1:c.27A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-22A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.294A>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17309
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33229
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2463
  bin: 8.25e1
  variant carriers: 0
hgvs: c.465A>C
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-110083871-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083871
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083871
    reference: chr 5
allele count: 1
allele frequency: 8.252050634582693e-6
allele num: 121182
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.197G>C
  hgvsp: ENSP00000424136.2:p.Arg66Thr
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.470G>C
  hgvsp: ENSP00000348211.3:p.Arg157Thr
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.470G>C
  hgvsp: ENSP00000399717.2:p.Arg157Thr
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-17G>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.299G>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.786G>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.32G>C
  hgvsp: ENSP00000425708.1:p.Arg11Thr
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8337
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33306
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8113
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg157Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

5-110083873-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083873
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083873
    reference: chr 5
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.199G>A
  hgvsp: ENSP00000424136.2:p.Ala67Thr
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-15G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.472G>A
  hgvsp: ENSP00000348211.3:p.Ala158Thr
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.788G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.472G>A
  hgvsp: ENSP00000399717.2:p.Ala158Thr
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.34G>A
  hgvsp: ENSP00000425708.1:p.Ala12Thr
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.301G>A
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23676
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2877
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33345
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala158Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

5-110083885-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083885
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083885
    reference: chr 5
allele count: 1
allele frequency: 8.244974687927709e-6
allele num: 121286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.800G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.211G>T
  hgvsp: ENSP00000424136.2:p.Gly71Ter
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.484G>T
  hgvsp: ENSP00000348211.3:p.Gly162Ter
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.46G>T
  hgvsp: ENSP00000425708.1:p.Gly16Ter
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.313G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.484G>T
  hgvsp: ENSP00000399717.2:p.Gly162Ter
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.-3G>T
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8349
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3616
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33410
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2462
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly162Ter
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

5-110083893-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083893
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083893
    reference: chr 5
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.492A>G
  hgvsp: ENST00000447245.2:c.492A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.492A>G
  hgvsp: ENST00000355943.3:c.492A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.219A>G
  hgvsp: ENST00000509442.2:c.219A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.6A>G
  hgvsp: ENST00000513807.1:c.6A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.54A>G
  hgvsp: ENST00000504098.1:c.54A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.808A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.321A>G
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7653
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8115
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly164Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

5-110083898-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083898
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083898
    reference: chr 5
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.11C>T
  hgvsp: ENSP00000421134.1:p.Thr4Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.813C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.224C>T
  hgvsp: ENSP00000424136.2:p.Thr75Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.497C>T
  hgvsp: ENSP00000399717.2:p.Thr166Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.59C>T
  hgvsp: ENSP00000425708.1:p.Thr20Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.497C>T
  hgvsp: ENSP00000348211.3:p.Thr166Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.326C>T
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8115
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2879
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr166Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

5-110083913-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083913
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083913
    reference: chr 5
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.512G>T
  hgvsp: ENSP00000399717.2:p.Gly171Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.26G>T
  hgvsp: ENSP00000421134.1:p.Gly9Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.239G>T
  hgvsp: ENSP00000424136.2:p.Gly80Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.828G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.341G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.512G>T
  hgvsp: ENSP00000348211.3:p.Gly171Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.74G>T
  hgvsp: ENSP00000425708.1:p.Gly25Val
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2460
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7655
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8115
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly171Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum

5-110083919-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083919
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083919
    reference: chr 5
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.834C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.80C>T
  hgvsp: ENSP00000425708.1:p.Thr27Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.32C>T
  hgvsp: ENSP00000421134.1:p.Thr11Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.518C>T
  hgvsp: ENSP00000348211.3:p.Thr173Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.245C>T
  hgvsp: ENSP00000424136.2:p.Thr82Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.518C>T
  hgvsp: ENSP00000399717.2:p.Thr173Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.347C>T
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8349
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7655
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr173Ile
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

5-110083922-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083922
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083922
    reference: chr 5
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.521T>C
  hgvsp: ENSP00000348211.3:p.Leu174Pro
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.35T>C
  hgvsp: ENSP00000421134.1:p.Leu12Pro
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.83T>C
  hgvsp: ENSP00000425708.1:p.Leu28Pro
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.521T>C
  hgvsp: ENSP00000399717.2:p.Leu174Pro
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.248T>C
  hgvsp: ENSP00000424136.2:p.Leu83Pro
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.350T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.837T>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33455
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu174Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

5-110083927-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083927
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083927
    reference: chr 5
allele count: 2
allele frequency: 1.648750247312537e-5
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.526G>T
  hgvsp: ENSP00000348211.3:p.Ala176Ser
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.88G>T
  hgvsp: ENSP00000425708.1:p.Ala30Ser
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.526G>T
  hgvsp: ENSP00000399717.2:p.Ala176Ser
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.842G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.253G>T
  hgvsp: ENSP00000424136.2:p.Ala85Ser
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.40G>T
  hgvsp: ENSP00000421134.1:p.Ala14Ser
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.355G>T
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33428
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala176Ser
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum

5-110083934-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083934
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083934
    reference: chr 5
allele count: 3
allele frequency: 2.473573984597879e-5
allele num: 121282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.260G>T
  hgvsp: ENSP00000424136.2:p.Gly87Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.47G>T
  hgvsp: ENSP00000421134.1:p.Gly16Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.533G>T
  hgvsp: ENSP00000348211.3:p.Gly178Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.95G>T
  hgvsp: ENSP00000425708.1:p.Gly32Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.849G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.362G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.533G>T
  hgvsp: ENSP00000399717.2:p.Gly178Val
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23521
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8116
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2876
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33359
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly178Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

5-110083934-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083934
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083934
    reference: chr 5
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.260G>C
  hgvsp: ENSP00000424136.2:p.Gly87Ala
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.533G>C
  hgvsp: ENSP00000399717.2:p.Gly178Ala
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.533G>C
  hgvsp: ENSP00000348211.3:p.Gly178Ala
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.362G>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.95G>C
  hgvsp: ENSP00000425708.1:p.Gly32Ala
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.47G>C
  hgvsp: ENSP00000421134.1:p.Gly16Ala
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.849G>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23521
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33359
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8116
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Gly178Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

5-110083936-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083936
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083936
    reference: chr 5
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.535A>G
  hgvsp: ENSP00000399717.2:p.Ile179Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.535A>G
  hgvsp: ENSP00000348211.3:p.Ile179Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.262A>G
  hgvsp: ENSP00000424136.2:p.Ile88Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.49A>G
  hgvsp: ENSP00000421134.1:p.Ile17Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.364A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.97A>G
  hgvsp: ENSP00000425708.1:p.Ile33Val
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.851A>G
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1049
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33334
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile179Val
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/5-110083942-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083942
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083942
    reference: chr 5
allele count: 1
allele frequency: 8.249191579225235e-6
allele num: 121224
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.103A>C
  hgvsp: ENSP00000425708.1:p.Ser35Arg
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.541A>C
  hgvsp: ENSP00000348211.3:p.Ser181Arg
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.857A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.541A>C
  hgvsp: ENSP00000399717.2:p.Ser181Arg
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.55A>C
  hgvsp: ENSP00000421134.1:p.Ser19Arg
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.370A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.268A>C
  hgvsp: ENSP00000424136.2:p.Ser90Arg
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8345
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17522
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2876
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2457
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser181Arg
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-110083944-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083944
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083944
    reference: chr 5
allele count: 1
allele frequency: 8.250552787036732e-6
allele num: 121204
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.372T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.57T>C
  hgvsp: ENST00000513807.1:c.57T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.543T>C
  hgvsp: ENST00000355943.3:c.543T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.543T>C
  hgvsp: ENST00000447245.2:c.543T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.270T>C
  hgvsp: ENST00000509442.2:c.270T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.859T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.105T>C
  hgvsp: ENST00000504098.1:c.105T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8349
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33208
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1049
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7627
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8113
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser181Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

5-110083948-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083948
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083948
    reference: chr 5
allele count: 1
allele frequency: 8.256138438929344e-6
allele num: 121122
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.547T>C
  hgvsp: ENSP00000399717.2:p.Phe183Leu
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.547T>C
  hgvsp: ENSP00000348211.3:p.Phe183Leu
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.274T>C
  hgvsp: ENSP00000424136.2:p.Phe92Leu
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.61T>C
  hgvsp: ENSP00000421134.1:p.Phe21Leu
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.109T>C
  hgvsp: ENSP00000425708.1:p.Phe37Leu
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.376T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.863T>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23239
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32997
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe183Leu
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

5-110083959-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083959
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083959
    reference: chr 5
allele count: 3
allele frequency: 2.481512730160306e-5
allele num: 120894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.558G>A
  hgvsp: ENST00000447245.2:c.558G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.72G>A
  hgvsp: ENST00000513807.1:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.120G>A
  hgvsp: ENST00000504098.1:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.558G>A
  hgvsp: ENST00000355943.3:c.558G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.387G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.874G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.285G>A
  hgvsp: ENST00000509442.2:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu186Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

5-110083970-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083970
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083970
    reference: chr 5
allele count: 464
allele frequency: 3.852796598910589e-3
allele num: 120432
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.125+6A>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.563+6A>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.77+6A>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.392+6A>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.563+6A>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.290+6A>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.879+6A>T
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 6.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 4.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 9.75e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 5.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 8337
  bin: 3.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 17305
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 4.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 6.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 8.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 21205
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 3.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.25e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1359
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 2.75e1
  variant carriers: 0
hgvs: c.563+6A>T
num of homozygotes: 9
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

5-110083971-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083971
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083971
    reference: chr 5
allele count: 3
allele frequency: 2.491487417988539e-5
allele num: 120410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.392+7T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.290+7T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.879+7T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.563+7T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.563+7T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.77+7T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.125+7T>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3575
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8099
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 2.75e1
  variant carriers: 0
hgvs: c.563+7T>C
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD

5-110083973-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083973
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083973
    reference: chr 5
allele count: 3
allele frequency: 2.491446035278876e-5
allele num: 120412
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.563+9T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.879+9T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.125+9T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.563+9T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.290+9T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.392+9T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.77+9T>A
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17468
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8100
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/5-110083976-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083976
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083976
    reference: chr 5
allele count: 1
allele frequency: 8.314487162431821e-6
allele num: 120272
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.290+12A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.563+12A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.77+12A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.563+12A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.392+12A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.879+12A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.125+12A>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3569
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30470
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

5-110083982-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083982
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083982
    reference: chr 5
allele count: 1
allele frequency: 8.329168748958854e-6
allele num: 120060
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.290+18T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.563+18T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.879+18T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.125+18T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.392+18T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.563+18T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.77+18T>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8272
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7258
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2438
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

5-110083983-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083983
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083983
    reference: chr 5
allele count: 76
allele frequency: 6.334705852934803e-4
allele num: 119974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.392+19C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.290+19C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.77+19C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.563+19C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.125+19C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.879+19C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.563+19C>T
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 19345
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 16987
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8270
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 9.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 8122
  bin: 9.75e1
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7226
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

5-110083989-TATTAGTTTCATGTGGTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083989
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083972
    reference: chr 5
allele count: 1
allele frequency: 8.344598541364175e-6
allele num: 119838
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2787
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3525
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1042
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1234
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: TATTAGTTTCATGTGGTG
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

5-110083994-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083994
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083994
    reference: chr 5
allele count: 1
allele frequency: 8.363022061652199e-6
allele num: 119574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.77+30G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.563+30G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.290+30G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.125+30G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.563+30G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.392+30G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.879+30G>A
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15736
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8097
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4929
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22885
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2093
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2755
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6777
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1384
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-110083999-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110083999
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110083999
    reference: chr 5
allele count: 2
allele frequency: 1.67464916100077e-5
allele num: 119428
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.290+35A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.563+35A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.125+35A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.879+35A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.77+35A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.392+35A>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.563+35A>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14234
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14783
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2882
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1604
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6396
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2702
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2989
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

5-110084009-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110084009
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110084009
    reference: chr 5
allele count: 1
allele frequency: 8.424457886135027e-6
allele num: 118702
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.563+45G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.290+45G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.563+45G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.77+45G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.125+45G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.879+45G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.392+45G>A
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3076
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3383
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3363
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2366
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1802
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5929
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2861
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-110091121-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091121
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091121
    reference: chr 5
allele count: 1
allele frequency: 8.937828465196096e-6
allele num: 111884
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.78-44A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2120A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.564-44A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.291-44A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.564-44A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-246A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.880-44A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.393-44A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.126-44A>G
  variant of: http://identifiers.org/hgnc/25198
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1793
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4249
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3826
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3462
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

5-110091135-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091135
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091135
    reference: chr 5
allele count: 1
allele frequency: 8.872642095363157e-6
allele num: 112706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.564-30G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.78-30G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.393-30G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.880-30G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.564-30G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-232G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.291-30G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.126-30G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2134G>A
  variant of: http://identifiers.org/hgnc/25198
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25097
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5433
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5079
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11799
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5702
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1703
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

5-110091141-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091141
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091141
    reference: chr 5
allele count: 1
allele frequency: 8.75825465501235e-6
allele num: 114178
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.291-24T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.393-24T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.880-24T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.564-24T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2140T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.564-24T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-226T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.78-24T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.126-24T>C
  variant of: http://identifiers.org/hgnc/25198
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1999
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2464
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-110091168-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091168
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091168
    reference: chr 5
allele count: 2
allele frequency: 1.67470525187567e-5
allele num: 119424
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.129G>A
  hgvsp: ENST00000504098.1:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-199G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.567G>A
  hgvsp: ENST00000355943.3:c.567G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.567G>A
  hgvsp: ENST00000447245.2:c.567G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.81G>A
  hgvsp: ENST00000513807.1:c.81G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.883G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2167G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.396G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.294G>A
  hgvsp: ENST00000509442.2:c.294G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5746
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu189Glu
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

5-110091169-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091169
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091169
    reference: chr 5
allele count: 1
allele frequency: 8.369601606963508e-6
allele num: 119480
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.884G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.568G>A
  hgvsp: ENSP00000399717.2:p.Val190Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-198G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2168G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.82G>A
  hgvsp: ENSP00000421134.1:p.Val28Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.130G>A
  hgvsp: ENSP00000425708.1:p.Val44Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.568G>A
  hgvsp: ENSP00000348211.3:p.Val190Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.295G>A
  hgvsp: ENSP00000424136.2:p.Val99Ile
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.397G>A
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val190Ile
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

5-110091169-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091169
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091169
    reference: chr 5
allele count: 1
allele frequency: 8.369601606963508e-6
allele num: 119480
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.568G>T
  hgvsp: ENSP00000399717.2:p.Val190Phe
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.130G>T
  hgvsp: ENSP00000425708.1:p.Val44Phe
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.82G>T
  hgvsp: ENSP00000421134.1:p.Val28Phe
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-198G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.568G>T
  hgvsp: ENSP00000348211.3:p.Val190Phe
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.397G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.295G>T
  hgvsp: ENSP00000424136.2:p.Val99Phe
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2168G>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.884G>T
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5750
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val190Phe
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

5-110091170-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091170
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091170
    reference: chr 5
allele count: 2
allele frequency: 1.67313612635524e-5
allele num: 119536
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2169T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-197T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.131T>C
  hgvsp: ENSP00000425708.1:p.Val44Ala
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.569T>C
  hgvsp: ENSP00000348211.3:p.Val190Ala
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.398T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.83T>C
  hgvsp: ENSP00000421134.1:p.Val28Ala
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.296T>C
  hgvsp: ENSP00000424136.2:p.Val99Ala
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.569T>C
  hgvsp: ENSP00000399717.2:p.Val190Ala
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.885T>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32353
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val190Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

5-110091195-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091195
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091195
    reference: chr 5
allele count: 4
allele frequency: 3.328617791462096e-5
allele num: 120170
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.321A>G
  hgvsp: ENST00000509442.2:c.321A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.910A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.594A>G
  hgvsp: ENST00000447245.2:c.594A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.108A>G
  hgvsp: ENST00000513807.1:c.108A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.594A>G
  hgvsp: ENST00000355943.3:c.594A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2194A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-172A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.156A>G
  hgvsp: ENST00000504098.1:c.156A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.423A>G
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5793
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2067
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2523
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gln198Gln
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP

5-110091197-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091197
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091197
    reference: chr 5
allele count: 1
allele frequency: 8.320990530712775e-6
allele num: 120178
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-170T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.596T>C
  hgvsp: ENSP00000399717.2:p.Ile199Thr
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.323T>C
  hgvsp: ENSP00000424136.2:p.Ile108Thr
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2196T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.425T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.912T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.158T>C
  hgvsp: ENSP00000425708.1:p.Ile53Thr
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.110T>C
  hgvsp: ENSP00000421134.1:p.Ile37Thr
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.596T>C
  hgvsp: ENSP00000348211.3:p.Ile199Thr
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14554
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5587
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile199Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

5-110091199-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091199
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091199
    reference: chr 5
allele count: 7
allele frequency: 5.823627287853578e-5
allele num: 120200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.325G>A
  hgvsp: ENSP00000424136.2:p.Gly109Arg
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-168G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.160G>A
  hgvsp: ENSP00000425708.1:p.Gly54Arg
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.427G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.112G>A
  hgvsp: ENSP00000421134.1:p.Gly38Arg
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.598G>A
  hgvsp: ENSP00000348211.3:p.Gly200Arg
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2198G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.914G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.598G>A
  hgvsp: ENSP00000399717.2:p.Gly200Arg
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14560
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly200Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

5-110091206-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091206
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091206
    reference: chr 5
allele count: 1
allele frequency: 8.319190709127816e-6
allele num: 120204
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.332A>G
  hgvsp: ENSP00000424136.2:p.His111Arg
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.605A>G
  hgvsp: ENSP00000348211.3:p.His202Arg
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2205A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.167A>G
  hgvsp: ENSP00000425708.1:p.His56Arg
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.434A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-161A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.119A>G
  hgvsp: ENSP00000421134.1:p.His40Arg
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.921A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.605A>G
  hgvsp: ENSP00000399717.2:p.His202Arg
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His202Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-110091207-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091207
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091207
    reference: chr 5
allele count: 1
allele frequency: 8.319605983460623e-6
allele num: 120198
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.168C>T
  hgvsp: ENST00000504098.1:c.168C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.333C>T
  hgvsp: ENST00000509442.2:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.120C>T
  hgvsp: ENST00000513807.1:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.606C>T
  hgvsp: ENST00000355943.3:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.606C>T
  hgvsp: ENST00000447245.2:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.435C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.922C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-160C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2206C>T
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His202His
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

5-110091221-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091221
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091221
    reference: chr 5
allele count: 1
allele frequency: 8.329168748958854e-6
allele num: 120060
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.620C>T
  hgvsp: ENSP00000399717.2:p.Ser207Phe
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.936C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.134C>T
  hgvsp: ENSP00000421134.1:p.Ser45Phe
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.347C>T
  hgvsp: ENSP00000424136.2:p.Ser116Phe
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.182C>T
  hgvsp: ENSP00000425708.1:p.Ser61Phe
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-146C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2220C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.620C>T
  hgvsp: ENSP00000348211.3:p.Ser207Phe
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.449C>T
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser207Phe
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

5-110091226-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091226
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091226
    reference: chr 5
allele count: 1
allele frequency: 8.335278231587371e-6
allele num: 119972
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.134+5G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-146+5G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.620+5G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.182+5G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.449+5G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.936+5G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.347+5G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.620+5G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2220+5G>A
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5587
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
hgvs: c.620+5G>A
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ

5-110091229-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091229
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091229
    reference: chr 5
allele count: 1
allele frequency: 8.340005337603416e-6
allele num: 119904
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.182+8T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.347+8T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2220+8T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-146+8T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.620+8T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.134+8T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.936+8T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.620+8T>C
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.449+8T>C
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5754
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6429
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38635
  bin: 6.25e1
  variant carriers: 0
hgvs: c.620+8T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/5-110091230-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091230
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091231
    reference: chr 5
allele count: 1
allele frequency: 8.346966712296751e-6
allele num: 119804
alternate allele: CA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.620+15dupA
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2220+15dupA
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.347+15dupA
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.134+15dupA
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.620+15dupA
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.182+15dupA
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-146+15dupA
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.449+15dupA
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.936+15dupA
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1731
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2492
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

5-110091230-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091230
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091230
    reference: chr 5
allele count: 1
allele frequency: 8.346966712296751e-6
allele num: 119804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2220+9C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.347+9C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.134+9C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.936+9C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.182+9C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.620+9C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.620+9C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.449+9C>T
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-146+9C>T
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2492
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD

5-110091239-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091239
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091239
    reference: chr 5
allele count: 6
allele frequency: 5.016722408026756e-5
allele num: 119600
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-146+18G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.936+18G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.449+18G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.134+18G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.620+18G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.182+18G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2220+18G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.620+18G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.347+18G>A
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14390
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37062
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

5-110091242-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091242
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091242
    reference: chr 5
allele count: 1
allele frequency: 8.368060785593547e-6
allele num: 119502
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.936+21T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.182+21T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.347+21T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2220+21T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.620+21T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.620+21T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.449+21T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.134+21T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-146+21T>A
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1724
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2033
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1856
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

5-110091249-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091249
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091249
    reference: chr 5
allele count: 2
allele frequency: 1.676783258995942e-5
allele num: 119276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2220+28T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.620+28T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.134+28T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.936+28T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.620+28T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-146+28T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.182+28T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.449+28T>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.347+28T>A
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5495
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5581
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2474
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2018
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6120
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

5-110091256-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110091256
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110091256
    reference: chr 5
allele count: 1
allele frequency: 8.412409987213136e-6
allele num: 118872
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.936+35T>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.449+35T>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.347+35T>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.182+35T>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.620+35T>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-146+35T>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.134+35T>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.620+35T>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2220+35T>G
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5159
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7464
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3113
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5356
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26554
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

5-110092351-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110092351
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110092351
    reference: chr 5
allele count: 1
allele frequency: 8.456373568758774e-6
allele num: 118254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.348-51G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2221-51G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.183-51G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.450-51G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.937-51G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-19-51G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.621-51G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.621-51G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.135-51G>A
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3055
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16694
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

5-110092355-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110092355
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110092355
    reference: chr 5
allele count: 32
allele frequency: 2.69955626043969e-4
allele num: 118538
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.348-47A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.183-47A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.621-47A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.937-47A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2221-47A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.450-47A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-19-47A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.621-47A>G
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.135-47A>G
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13791
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4588
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9229
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13091
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3796
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1619
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21202
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum

5-110092357-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 110092357
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 110092357
    reference: chr 5
allele count: 13
allele frequency: 1.097565094052886e-4
allele num: 118444
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000425708
  ensembl transcript: ENST00000504098
  gene symbol: SLC25A46
  hgvsc: ENST00000504098.1:c.183-45G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000421134
  ensembl transcript: ENST00000513807
  gene symbol: SLC25A46
  hgvsc: ENST00000513807.1:c.135-45G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000424136
  ensembl transcript: ENST00000509442
  gene symbol: SLC25A46
  hgvsc: ENST00000509442.2:c.348-45G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000502462
  gene symbol: SLC25A46
  hgvsc: ENST00000502462.2:n.937-45G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000508781
  gene symbol: SLC25A46
  hgvsc: ENST00000508781.1:n.450-45G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000348211
  ensembl transcript: ENST00000355943
  gene symbol: SLC25A46
  hgvsc: ENST00000355943.3:c.621-45G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000426604
  ensembl transcript: ENST00000509432
  gene symbol: SLC25A46
  hgvsc: ENST00000509432.1:c.-19-45G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl transcript: ENST00000513706
  gene symbol: SLC25A46
  hgvsc: ENST00000513706.1:n.2221-45G>A
  variant of: http://identifiers.org/hgnc/25198
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000164209
  ensembl protein: ENSP00000399717
  ensembl transcript: ENST00000447245
  gene symbol: SLC25A46
  hgvsc: ENST00000447245.2:c.621-45G>A
  variant of: http://identifiers.org/hgnc/25198
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14204
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9351
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13933
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9116
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1455
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24853
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2576
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1749
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 1041
allele frequency: 1.010875898232667e-1
allele num: 10298
num of homozygotes: 65

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 8
allele frequency: 8.830022075055188e-3
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 1.513317191283293e-3
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.062810719049351e-4
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 460
allele frequency: 6.906699498513558e-3
allele num: 66602
num of homozygotes: 2

Latino
type: Population
allele count: 85
allele frequency: 7.345316280677497e-3
allele num: 11572
num of homozygotes: 1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.16e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.88e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.662e0

DP
type: SiteQuality
SIO_000300: 2.088834e6

VQSLOD
type: SiteQuality
SIO_000300: 6.07e0

QD
type: SiteQuality
SIO_000300: 1.179e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 161
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13357
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2906
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4249
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.312138728323699e-4
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.993463e6

FS
type: SiteQuality
SIO_000300: 4.447e0

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -8.048e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.018e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.15e0

QD
type: SiteQuality
SIO_000300: 1.057e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2906
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4248
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50154659299078e-5
allele num: 66598
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.284e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.12e-1

DP
type: SiteQuality
SIO_000300: 1.993041e6

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.71e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.405e1

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2901
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2630
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.43161094224924e-4
allele num: 16450
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 9.59e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.56e0

DP
type: SiteQuality
SIO_000300: 1.991619e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.19e-1

GenotypeQuality
all individuals: 339
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6515
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4237
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13355
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 56
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variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1795
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2630
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.754194303550527e-5
allele num: 10252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.674e0

QD
type: SiteQuality
SIO_000300: 8.94e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.11e0

FS
type: SiteQuality
SIO_000300: 1.1891e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.69e-1

DP
type: SiteQuality
SIO_000300: 1.989773e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3547
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
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variant carriers: 0

GenotypeQuality
all individuals: 1795
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13354
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.13e0

VQSLOD
type: SiteQuality
SIO_000300: -2.239e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.31e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

MQRankSum
type: SiteQuality
SIO_000300: -1.56e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.988632e6

QD
type: SiteQuality
SIO_000300: 1.293e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2629
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GenotypeQuality
all individuals: 2891
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503352476021528e-5
allele num: 66518
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.454e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

VQSLOD
type: SiteQuality
SIO_000300: -2.725e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.674e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e0

DP
type: SiteQuality
SIO_000300: 1.986606e6

FS
type: SiteQuality
SIO_000300: 1.446e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 1.522e1

GenotypeQuality
all individuals: 3544
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 48
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 2865
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.168e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.76e-1

FS
type: SiteQuality
SIO_000300: 1.4926e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.967539e6

MQRankSum
type: SiteQuality
SIO_000300: -6.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.434e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510391493475109e-5
allele num: 66208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.511e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.687e0

MQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

QD
type: SiteQuality
SIO_000300: 1.167e1

DP
type: SiteQuality
SIO_000300: 1.944435e6

FS
type: SiteQuality
SIO_000300: 5.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.65e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 273
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13351
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.928514694201747e-5
allele num: 10072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.935272e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.612e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.683e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.324e0

FS
type: SiteQuality
SIO_000300: 2.4507e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3526
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13400
bin: 9.75e1
variant carriers: 71

GenotypeQuality
all individuals: 322
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2812
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2620
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6022
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 67
allele frequency: 6.66136408828793e-3
allele num: 10058
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.469812630117973e-4
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15916
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

DP
type: SiteQuality
SIO_000300: 1.931317e6

VQSLOD
type: SiteQuality
SIO_000300: 5.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.433e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

GenotypeQuality
all individuals: 1948
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3532
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 160
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2625
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variant carriers: 0

GenotypeQuality
all individuals: 1788
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.992006394884092e-5
allele num: 10008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15792
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.671522719389525e-5
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66070
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.589e1

VQSLOD
type: SiteQuality
SIO_000300: 4.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.27e0

DP
type: SiteQuality
SIO_000300: 1.911227e6

GenotypeQuality
all individuals: 1102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2370
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variant carriers: 0

GenotypeQuality
all individuals: 51
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GenotypeQuality
all individuals: 2810
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3550
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2772
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variant carriers: 0

GenotypeQuality
all individuals: 13353
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9916
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522950869604947e-5
allele num: 65662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.374e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e-1

DP
type: SiteQuality
SIO_000300: 1.896635e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e0

QD
type: SiteQuality
SIO_000300: 6.17e0

VQSLOD
type: SiteQuality
SIO_000300: -3.115e0

GenotypeQuality
all individuals: 3550
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 277
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variant carriers: 0

GenotypeQuality
all individuals: 2436
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1379
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variant carriers: 0

GenotypeQuality
all individuals: 2308
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16200
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.98003992015968e-5
allele num: 10020
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64866
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

FS
type: SiteQuality
SIO_000300: 2.25e0

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.89e-1

DP
type: SiteQuality
SIO_000300: 1.841953e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 1.672e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.734e0

GenotypeQuality
all individuals: 1366
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2456
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
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variant carriers: 0

GenotypeQuality
all individuals: 814
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variant carriers: 0

GenotypeQuality
all individuals: 41
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variant carriers: 0

GenotypeQuality
all individuals: 705
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variant carriers: 0

GenotypeQuality
all individuals: 2817
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1551
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variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536995481233285e-5
allele num: 65062
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.872203e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

QD
type: SiteQuality
SIO_000300: 8.5e0

MQRankSum
type: SiteQuality
SIO_000300: -6.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.166e0

MQ
type: SiteQuality
SIO_000300: 5.889e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-1

GenotypeQuality
all individuals: 1378
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28161
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
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GenotypeQuality
all individuals: 8107
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variant carriers: 1

GenotypeQuality
all individuals: 7314
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variant carriers: 0

GenotypeQuality
all individuals: 445
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variant carriers: 0

GenotypeQuality
all individuals: 3585
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variant carriers: 0

GenotypeQuality
all individuals: 1045
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variant carriers: 0

GenotypeQuality
all individuals: 1194
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variant carriers: 0

GenotypeQuality
all individuals: 52
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16266
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.177856301531213e-4
allele num: 8490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.774e-1

MQ
type: SiteQuality
SIO_000300: 5.89e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.47e0

DP
type: SiteQuality
SIO_000300: 1.890792e6

QD
type: SiteQuality
SIO_000300: 1.395e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.717e0

MQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

GenotypeQuality
all individuals: 417
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30541
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 203
bin: 4.25e1
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GenotypeQuality
all individuals: 170
bin: 5.25e1
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GenotypeQuality
all individuals: 3596
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variant carriers: 0

GenotypeQuality
all individuals: 502
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variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52494815176284e-5
allele num: 65576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16320
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.17e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.31e-2

FS
type: SiteQuality
SIO_000300: 1.868e0

MQRankSum
type: SiteQuality
SIO_000300: -1.458e0

DP
type: SiteQuality
SIO_000300: 1.913117e6

QD
type: SiteQuality
SIO_000300: 1.429e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.18e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8109
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1043
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variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.048780487804878e-5
allele num: 65600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

DP
type: SiteQuality
SIO_000300: 1.915458e6

FS
type: SiteQuality
SIO_000300: 6.614e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

QD
type: SiteQuality
SIO_000300: 1.69e1

GenotypeQuality
all individuals: 2867
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 45
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 335
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66344
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.49e-1

MQ
type: SiteQuality
SIO_000300: 6.073e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.95e-1

DP
type: SiteQuality
SIO_000300: 1.94208e6

FS
type: SiteQuality
SIO_000300: 1.764e0

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.512e1

VQSLOD
type: SiteQuality
SIO_000300: 2.75e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 48
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GenotypeQuality
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GenotypeQuality
all individuals: 21
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 2867
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.934610176049526e-4
allele num: 10338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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QD
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DP
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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MQ
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SIO_000300: 6.073e1

FS
type: SiteQuality
SIO_000300: 1.764e0

InbreedingCoeff
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SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.95e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.070908207867897e-5
allele num: 16472
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

QD
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BaseQRankSum
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FS
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MQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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DP
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.501411326647048e-5
allele num: 66604
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South Asian
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East Asian
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allele frequency: 0.0e0
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Latino
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Other
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allele frequency: 0.0e0
allele num: 904
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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ReadPosRankSum
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MQ
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FS
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SIO_000300: 0.0e0

VQSLOD
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.08e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele num: 16486
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Other
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

InbreedingCoeff
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.949811e6

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.513e0

MQ
type: SiteQuality
SIO_000300: 5.937e1

QD
type: SiteQuality
SIO_000300: 9.16e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66688
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6608
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South Asian
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Other
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DP
type: SiteQuality
SIO_000300: 1.950242e6

ReadPosRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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MQ
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ClippingRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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num of homozygotes: 0

Other
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num of homozygotes: 0

Latino
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VQSLOD
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InbreedingCoeff
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FS
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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DP
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ReadPosRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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num of homozygotes: 0

European (Finnish)
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Other
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Latino
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African
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South Asian
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MQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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DP
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MQ
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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ClippingRankSum
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FS
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MQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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African
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East Asian
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Latino
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European (Finnish)
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Other
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BaseQRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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FS
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DP
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MQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.211827435773146e-4
allele num: 16504
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 0.0e0

FS
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MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 4.88e-1

ReadPosRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.91e-1

DP
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QD
type: SiteQuality
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MQRankSum
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SIO_000300: 6.24e-1

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
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allele frequency: 1.817961459217065e-4
allele num: 16502
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.77e-1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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MQRankSum
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SIO_000300: 4.28e-1

BaseQRankSum
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SIO_000300: -1.784e0

QD
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SIO_000300: 1.282e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.38e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: -1.784e0

DP
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SIO_000300: 1.949697e6

QD
type: SiteQuality
SIO_000300: 1.282e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.28e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

FS
type: SiteQuality
SIO_000300: 3.375e0

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.77e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500420117632937e-5
allele num: 66648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.08e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

QD
type: SiteQuality
SIO_000300: 1.17e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 2.803e0

VQSLOD
type: SiteQuality
SIO_000300: 4.62e-1

DP
type: SiteQuality
SIO_000300: 1.949224e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50105073551486e-5
allele num: 66620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
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MQRankSum
type: SiteQuality
SIO_000300: -6.909999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

DP
type: SiteQuality
SIO_000300: 1.948469e6

VQSLOD
type: SiteQuality
SIO_000300: 4.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.266e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 3.696e0

QD
type: SiteQuality
SIO_000300: 1.376e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.69e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.381e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.62e0

MQ
type: SiteQuality
SIO_000300: 5.886e1

VQSLOD
type: SiteQuality
SIO_000300: -1.6e0

InbreedingCoeff
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 1.19e0

QD
type: SiteQuality
SIO_000300: 1.055e1

DP
type: SiteQuality
SIO_000300: 1.948223e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.62e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502765087761481e-5
allele num: 66544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.946925e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.989e1

VQSLOD
type: SiteQuality
SIO_000300: 2.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

QD
type: SiteQuality
SIO_000300: 1.496e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66386
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.473026163463765e-4
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.232e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

FS
type: SiteQuality
SIO_000300: 2.193e0

DP
type: SiteQuality
SIO_000300: 1.941851e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.084e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 456

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 437
allele frequency: 4.231216111541441e-2
allele num: 10328
num of homozygotes: 9

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.059257914169845e-4
allele num: 66084
num of homozygotes: 0

Latino
type: Population
allele count: 20
allele frequency: 1.736714136853074e-3
allele num: 11516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.02e-2

QD
type: SiteQuality
SIO_000300: 1.427e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 201
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.54008898574412e-5
allele num: 66078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-1

FS
type: SiteQuality
SIO_000300: 5.219e0

MQRankSum
type: SiteQuality
SIO_000300: 9.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.31e-1

MQ
type: SiteQuality
SIO_000300: 5.993e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-2

DP
type: SiteQuality
SIO_000300: 1.93186e6

QD
type: SiteQuality
SIO_000300: 1.608e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31130
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66078
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.827930782354375e-4
allele num: 16412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.931585e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 2.259e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.525e0

MQRankSum
type: SiteQuality
SIO_000300: -3.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

QD
type: SiteQuality
SIO_000300: 1.348e1

GenotypeQuality
all individuals: 8098
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1044
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163061177017911e-4
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65986
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

VQSLOD
type: SiteQuality
SIO_000300: 6.3e-2

MQRankSum
type: SiteQuality
SIO_000300: -9.78e-1

QD
type: SiteQuality
SIO_000300: 1.033e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.6e-1

DP
type: SiteQuality
SIO_000300: 1.924864e6

GenotypeQuality
all individuals: 745
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3559
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2808
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28469
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65840
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 5.948e1

FS
type: SiteQuality
SIO_000300: 2.59e0

DP
type: SiteQuality
SIO_000300: 1.908256e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e0

VQSLOD
type: SiteQuality
SIO_000300: -5.33e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.996e1

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28567
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
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variant carriers: 0

GenotypeQuality
all individuals: 741
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variant carriers: 0

GenotypeQuality
all individuals: 2800
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1928
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variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3550
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 71
allele frequency: 6.891865657153951e-3
allele num: 10302
num of homozygotes: 1

Latino
type: Population
allele count: 5
allele frequency: 4.355400696864111e-4
allele num: 11480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.69e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.471e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

DP
type: SiteQuality
SIO_000300: 1.9082e6

VQSLOD
type: SiteQuality
SIO_000300: 4.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

FS
type: SiteQuality
SIO_000300: 8.98e-1

QD
type: SiteQuality
SIO_000300: 1.341e1

GenotypeQuality
all individuals: 2425
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26427
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8069
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2429
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variant carriers: 0

GenotypeQuality
all individuals: 1367
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variant carriers: 0

GenotypeQuality
all individuals: 207
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variant carriers: 0

GenotypeQuality
all individuals: 7129
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variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521745746720638e-5
allele num: 65714
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.087e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.887133e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

QD
type: SiteQuality
SIO_000300: 3.75e0

VQSLOD
type: SiteQuality
SIO_000300: -1.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

MQRankSum
type: SiteQuality
SIO_000300: -4.998e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

GenotypeQuality
all individuals: 66
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2462
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
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GenotypeQuality
all individuals: 771
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variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 8068
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variant carriers: 1

GenotypeQuality
all individuals: 748
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variant carriers: 0

GenotypeQuality
all individuals: 2748
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.738203425375742e-5
allele num: 11444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65558
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.355e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.658e0

FS
type: SiteQuality
SIO_000300: 3.332e0

DP
type: SiteQuality
SIO_000300: 1.864406e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.626e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

GenotypeQuality
all individuals: 920
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 8070
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1037
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variant carriers: 0

GenotypeQuality
all individuals: 2997
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528117359413203e-5
allele num: 65440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.74089226573154e-5
allele num: 10266
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.141e0

VQSLOD
type: SiteQuality
SIO_000300: 8.54e-1

DP
type: SiteQuality
SIO_000300: 1.844654e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 1.505e1

GenotypeQuality
all individuals: 117
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3952
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65002
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.796238244514106e-5
allele num: 10208
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.936e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.825082e6

ClippingRankSum
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.187e0

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5577
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GenotypeQuality
all individuals: 2320
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10662
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.260956674179814e-5
allele num: 15972
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60964
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9242
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MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.453e1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

VQSLOD
type: SiteQuality
SIO_000300: 3.2e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 1.481273e6

GenotypeQuality
all individuals: 3624
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variant carriers: 0

GenotypeQuality
all individuals: 1946
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GenotypeQuality
all individuals: 550
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.281603861147207e-5
allele num: 10774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16012
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7862
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
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SIO_000300: -1.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-2

FS
type: SiteQuality
SIO_000300: 3.565e0

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

DP
type: SiteQuality
SIO_000300: 1.577773e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-2

QD
type: SiteQuality
SIO_000300: 9.5e0

MQ
type: SiteQuality
SIO_000300: 5.65e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.078e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8012
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.6e-5
allele num: 62500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.68e-2

MQRankSum
type: SiteQuality
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DP
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SIO_000300: 1.617895e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.751e1

FS
type: SiteQuality
SIO_000300: 4.091e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.42e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11252
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.085686465433301e-5
allele num: 16432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519248883352071e-5
allele num: 65822
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.675e0

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

QD
type: SiteQuality
SIO_000300: 7.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

FS
type: SiteQuality
SIO_000300: 3.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.701143e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9936
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65862
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.084945843981989e-5
allele num: 16434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.31e-1

FS
type: SiteQuality
SIO_000300: 5.096e0

DP
type: SiteQuality
SIO_000300: 1.701978e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.05e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.548e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.49e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9936
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518326197200206e-5
allele num: 65862
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.49e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 6.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.096e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.05e-1

DP
type: SiteQuality
SIO_000300: 1.701978e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.035454103933948e-5
allele num: 65888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9944
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-2

ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.036e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.82e-1

MQ
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SIO_000300: 6.0e1

BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.062e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

South Asian
type: Population
allele count: 4
allele frequency: 2.430428970713331e-4
allele num: 16458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66168
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.65e-1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.097e1

DP
type: SiteQuality
SIO_000300: 1.709498e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.511213201958532e-5
allele num: 66172
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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ClippingRankSum
type: SiteQuality
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MQ
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InbreedingCoeff
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FS
type: SiteQuality
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VQSLOD
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MQRankSum
type: SiteQuality
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DP
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ReadPosRankSum
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QD
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BaseQRankSum
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SIO_000300: 9.09e-1

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.554695999032998e-5
allele num: 66184
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

European (Finnish)
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allele count: 2
allele frequency: 3.055300947143294e-4
allele num: 6546
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.710058e6

QD
type: SiteQuality
SIO_000300: 1.213e1

FS
type: SiteQuality
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ClippingRankSum
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SIO_000300: -9.409999999999999e-1

BaseQRankSum
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SIO_000300: -2.057e0

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 6.077549532028686e-5
allele num: 16454
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6552
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66182
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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MQRankSum
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MQ
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QD
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ClippingRankSum
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FS
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VQSLOD
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InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
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ReadPosRankSum
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SIO_000300: -7.62e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.511030522816561e-5
allele num: 66180
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.63e-1

QD
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BaseQRankSum
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SIO_000300: -2.762e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.3e-2

InbreedingCoeff
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SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.45e-1

ReadPosRankSum
type: SiteQuality
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DP
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SIO_000300: 1.709351e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11310
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161710037174721e-4
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66096
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.4e0

VQSLOD
type: SiteQuality
SIO_000300: 4.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.74e-1

ReadPosRankSum
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.409e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11306
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.830908375933936e-5
allele num: 10172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66056
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
SIO_000300: 1.702739e6

VQSLOD
type: SiteQuality
SIO_000300: -8.22e-1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.65e-1

FS
type: SiteQuality
SIO_000300: 3.072e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.514830187535977e-5
allele num: 66014
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 10172
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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QD
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InbreedingCoeff
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ReadPosRankSum
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FS
type: SiteQuality
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DP
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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African
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European (Finnish)
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Latino
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East Asian
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.515978412467406e-5
allele num: 65964
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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DP
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QD
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MQRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Non-Finnish)
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African
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Latino
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South Asian
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European (Finnish)
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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DP
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VQSLOD
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BaseQRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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African
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East Asian
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European (Finnish)
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South Asian
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Other
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FS
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ClippingRankSum
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DP
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MQ
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QD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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SIO_000300: -7.099999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.35e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.8405825624877e-5
allele num: 10162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11278
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65760
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.152e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.487e0

QD
type: SiteQuality
SIO_000300: 8.630000000000001e0

DP
type: SiteQuality
SIO_000300: 1.676297e6

VQSLOD
type: SiteQuality
SIO_000300: -3.725e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.62e-1

MQ
type: SiteQuality
SIO_000300: 5.876e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

GenotypeQuality
all individuals: 336
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.048129972262017e-5
allele num: 65614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

QD
type: SiteQuality
SIO_000300: 1.318e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 1.650355e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.465e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

GenotypeQuality
all individuals: 1258
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529285823520416e-5
allele num: 65390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

QD
type: SiteQuality
SIO_000300: 1.676e1

VQSLOD
type: SiteQuality
SIO_000300: -1.446e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.72e-1

FS
type: SiteQuality
SIO_000300: 3.984e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

DP
type: SiteQuality
SIO_000300: 1.608075e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.49e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64812
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.187366421277606e-4
allele num: 8422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.895e1

QD
type: SiteQuality
SIO_000300: 1.342e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.278e0

DP
type: SiteQuality
SIO_000300: 2.10685e6

VQSLOD
type: SiteQuality
SIO_000300: -7.336e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.73e-1

FS
type: SiteQuality
SIO_000300: 3.058e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.806e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 31

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 117
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64980
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11234
num of homozygotes: 0

East Asian
type: Population
allele count: 32
allele frequency: 3.78698224852071e-3
allele num: 8450
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.121799e6

FS
type: SiteQuality
SIO_000300: 9.05e-1

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0