http://identifiers.org/exac.variant/5-140250788-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250788
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250788
    reference: chr 5
allele count: 11
allele frequency: 9.19578665774954e-5
allele num: 119620
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2100C>A
  hgvsp: ENST00000398640.2:c.2100C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47076C>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41510C>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82519C>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13556C>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73851C>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20314C>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47076C>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83311C>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61631C>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61631C>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27488C>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12767C>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67612C>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34465C>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40718C>A
  variant of: http://identifiers.org/hgnc/8672
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29816
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ile700Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

5-140250791-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250791
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250791
    reference: chr 5
allele count: 1
allele frequency: 8.358688020328329e-6
allele num: 119636
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41513C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61634C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47079C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40721C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13559C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73854C>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34468C>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83314C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47079C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27491C>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82522C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2103C>T
  hgvsp: ENST00000398640.2:c.2103C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61634C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12770C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20317C>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67615C>T
  variant of: http://identifiers.org/hgnc/8669
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile701Ile
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

5-140250792-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250792
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250792
    reference: chr 5
allele count: 3
allele frequency: 2.507354907729339e-5
allele num: 119648
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61635G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61635G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40722G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41514G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82523G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27492G>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73855G>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12771G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83315G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2104G>A
  hgvsp: ENSP00000381636.2:p.Ala702Thr
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67616G>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34469G>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47080G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20318G>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47080G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13560G>A
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29853
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala702Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/5-140250793-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250793
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250793
    reference: chr 5
allele count: 1
allele frequency: 8.355056480181806e-6
allele num: 119688
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73856C>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41515C>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61636C>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13561C>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27493C>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40723C>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2105C>A
  hgvsp: ENSP00000381636.2:p.Ala702Asp
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12772C>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82524C>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34470C>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67617C>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47081C>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20319C>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83316C>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47081C>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61636C>A
  variant of: http://identifiers.org/hgnc/8670
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala702Asp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP

5-140250796-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250796
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250796
    reference: chr 5
allele count: 1
allele frequency: 8.354358468813179e-6
allele num: 119698
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41518T>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67620T>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40726T>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34473T>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2108T>A
  hgvsp: ENSP00000381636.2:p.Ile703Asn
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47084T>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13564T>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27496T>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12775T>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61639T>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82527T>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73859T>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61639T>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20322T>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47084T>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83319T>A
  variant of: http://identifiers.org/hgnc/8663
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile703Asn
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

5-140250800-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250800
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250800
    reference: chr 5
allele count: 3
allele frequency: 2.505972567953623e-5
allele num: 119714
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67624C>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83323C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2112C>T
  hgvsp: ENST00000398640.2:c.2112C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34477C>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12779C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61643C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61643C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73863C>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47088C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13568C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47088C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82531C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41522C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20326C>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27500C>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40730C>T
  variant of: http://identifiers.org/hgnc/8672
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys704Cys
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

5-140250801-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250801
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250801
    reference: chr 5
allele count: 4
allele frequency: 3.34079444091805e-5
allele num: 119732
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20327G>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47089G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61644G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34478G>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61644G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82532G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40731G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83324G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41523G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2113G>A
  hgvsp: ENSP00000381636.2:p.Val705Met
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73864G>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67625G>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12780G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13569G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47089G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27501G>A
  variant of: http://identifiers.org/hgnc/8674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val705Met
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

5-140250822-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250822
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250822
    reference: chr 5
allele count: 6
allele frequency: 5.006759124818505e-5
allele num: 119838
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40752C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34499C>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73885C>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61665C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20348C>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47110C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2134C>T
  hgvsp: ENSP00000381636.2:p.Leu712Phe
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13590C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61665C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83345C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82553C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47110C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27522C>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67646C>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41544C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12801C>T
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8637
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18651
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu712Phe
num of homozygotes: 1
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

5-140250823-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250823
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250823
    reference: chr 5
allele count: 3
allele frequency: 2.503296006408438e-5
allele num: 119842
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67647T>C
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82554T>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83346T>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2135T>C
  hgvsp: ENSP00000381636.2:p.Leu712Pro
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47111T>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40753T>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47111T>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34500T>C
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61666T>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12802T>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73886T>C
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41545T>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20349T>C
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27523T>C
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13591T>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61666T>C
  variant of: http://identifiers.org/hgnc/8670
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu712Pro
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

5-140250826-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250826
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250826
    reference: chr 5
allele count: 1
allele frequency: 8.344598541364175e-6
allele num: 119838
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61669C>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13594C>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47114C>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34503C>G
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47114C>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27526C>G
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41548C>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2138C>G
  hgvsp: ENSP00000381636.2:p.Thr713Arg
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73889C>G
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61669C>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67650C>G
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20352C>G
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82557C>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12805C>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83349C>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40756C>G
  variant of: http://identifiers.org/hgnc/8672
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8634
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr713Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

5-140250831-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250831
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250831
    reference: chr 5
allele count: 1
allele frequency: 8.347663488989432e-6
allele num: 119794
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34508C>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47119C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61674C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67655C>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73894C>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27531C>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61674C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40761C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20357C>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83354C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12810C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2143C>T
  hgvsp: ENST00000398640.2:c.2143C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41553C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47119C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13599C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82562C>T
  variant of: http://identifiers.org/hgnc/8663
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu715Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-140250833-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250833
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250833
    reference: chr 5
allele count: 2
allele frequency: 1.669727834362999e-5
allele num: 119780
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27533G>C
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47121G>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20359G>C
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67657G>C
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2145G>C
  hgvsp: ENST00000398640.2:c.2145G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61676G>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34510G>C
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73896G>C
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47121G>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83356G>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61676G>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82564G>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40763G>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13601G>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12812G>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41555G>C
  variant of: http://identifiers.org/hgnc/8672
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18502
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29838
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu715Leu
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/5-140250834-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250834
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250834
    reference: chr 5
allele count: 1
allele frequency: 8.347106058329577e-6
allele num: 119802
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41556C>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61677C>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47122C>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27534C>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34511C>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82565C>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12813C>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67658C>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20360C>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2146C>A
  hgvsp: ENSP00000381636.2:p.Leu716Met
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47122C>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73897C>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13602C>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61677C>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40764C>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83357C>A
  variant of: http://identifiers.org/hgnc/8663
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu716Met
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-140250837-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250837
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250837
    reference: chr 5
allele count: 1
allele frequency: 8.34640937468701e-6
allele num: 119812
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67661T>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47125T>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61680T>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47125T>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41559T>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73900T>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83360T>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20363T>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40767T>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34514T>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12816T>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82568T>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2149T>A
  hgvsp: ENSP00000381636.2:p.Tyr717Asn
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13605T>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27537T>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61680T>A
  variant of: http://identifiers.org/hgnc/8670
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr717Asn
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

5-140250840-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250840
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250840
    reference: chr 5
allele count: 1
allele frequency: 8.348360382020972e-6
allele num: 119784
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47128A>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82571A>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20366A>G
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73903A>G
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67664A>G
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12819A>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83363A>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61683A>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61683A>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47128A>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2152A>G
  hgvsp: ENSP00000381636.2:p.Thr718Ala
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13608A>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27540A>G
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40770A>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41562A>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34517A>G
  variant of: http://identifiers.org/hgnc/8673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr718Ala
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

5-140250841-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250841
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250841
    reference: chr 5
allele count: 1
allele frequency: 8.349475652928997e-6
allele num: 119768
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47129C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61684C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61684C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67665C>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73904C>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2153C>T
  hgvsp: ENSP00000381636.2:p.Thr718Met
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13609C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40771C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34518C>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27541C>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83364C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12820C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47129C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20367C>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41563C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82572C>T
  variant of: http://identifiers.org/hgnc/8663
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29806
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr718Met
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

5-140250842-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250842
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250842
    reference: chr 5
allele count: 1
allele frequency: 8.349475652928997e-6
allele num: 119768
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27542G>C
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82573G>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83365G>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67666G>C
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61685G>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13610G>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47130G>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41564G>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34519G>C
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40772G>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12821G>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2154G>C
  hgvsp: ENST00000398640.2:c.2154G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47130G>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73905G>C
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61685G>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20368G>C
  variant of: http://identifiers.org/hgnc/8675
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8586
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr718Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

5-140250845-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250845
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250845
    reference: chr 5
allele count: 4
allele frequency: 3.339846033097874e-5
allele num: 119766
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12824G>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34522G>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61688G>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47133G>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27545G>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2157G>T
  hgvsp: ENST00000398640.2:c.2157G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82576G>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83368G>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73908G>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61688G>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47133G>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67669G>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41567G>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40775G>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20371G>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13613G>T
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8563
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala719Ala
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

5-140250853-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250853
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250853
    reference: chr 5
allele count: 6
allele frequency: 5.012028869286287e-5
allele num: 119712
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2165G>T
  hgvsp: ENSP00000381636.2:p.Trp722Leu
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67677G>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12832G>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61696G>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61696G>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82584G>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83376G>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73916G>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47141G>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20379G>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41575G>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34530G>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47141G>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27553G>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40783G>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13621G>T
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29634
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp722Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

5-140250854-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250854
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250854
    reference: chr 5
allele count: 1
allele frequency: 8.352404657300837e-6
allele num: 119726
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12833G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83377G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34531G>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13622G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41576G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47142G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67678G>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47142G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2166G>A
  hgvsp: ENSP00000381636.2:p.Trp722Ter
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61697G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61697G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82585G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73917G>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20380G>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27554G>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40784G>A
  variant of: http://identifiers.org/hgnc/8672
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp722Ter
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

5-140250857-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250857
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250857
    reference: chr 5
allele count: 2
allele frequency: 1.671150921639733e-5
allele num: 119678
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61700G>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2169G>C
  hgvsp: ENST00000398640.2:c.2169G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73920G>C
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67681G>C
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40787G>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12836G>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61700G>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82588G>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34534G>C
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47145G>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83380G>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27557G>C
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47145G>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20383G>C
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41579G>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13625G>C
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser723Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

5-140250863-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250863
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250863
    reference: chr 5
allele count: 1
allele frequency: 8.360924383799873e-6
allele num: 119604
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73926G>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47151G>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61706G>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12842G>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47151G>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2175G>T
  hgvsp: ENST00000398640.2:c.2175G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13631G>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61706G>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27563G>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20389G>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41585G>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67687G>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83386G>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40793G>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82594G>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34540G>T
  variant of: http://identifiers.org/hgnc/8673
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8337
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr725Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

5-140250868-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250868
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250868
    reference: chr 5
allele count: 1
allele frequency: 8.36470096194061e-6
allele num: 119550
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40798C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41590C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47156C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61711C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34545C>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20394C>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12847C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2180C>T
  hgvsp: ENSP00000381636.2:p.Thr727Ile
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61711C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73931C>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67692C>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83391C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13636C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47156C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27568C>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82599C>T
  variant of: http://identifiers.org/hgnc/8663
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr727Ile
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

5-140250872-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250872
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250872
    reference: chr 5
allele count: 1
allele frequency: 8.37436773523599e-6
allele num: 119412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82603G>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73935G>C
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47160G>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61715G>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40802G>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27572G>C
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34549G>C
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12851G>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47160G>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2184G>C
  hgvsp: ENSP00000381636.2:p.Glu728Asp
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61715G>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67696G>C
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20398G>C
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41594G>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13640G>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83395G>C
  variant of: http://identifiers.org/hgnc/8663
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu728Asp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

5-140250877-CGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250877
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250875
    reference: chr 5
allele count: 1
allele frequency: 8.381105635455429e-6
allele num: 119316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83402_1602+83403delTG
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41601_1602+41602delTG
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34556_2355+34557delTG
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12858_2388+12859delTG
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67703_2394+67704delTG
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47167_2352+47168delTG
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13647_1599+13648delTG
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47167_2352+47168delTG
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61722_2385+61723delTG
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82610_2394+82611delTG
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40809_2394+40810delTG
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73942_2388+73943delTG
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2191_2192delTG
  hgvsp: ENSP00000381636.2:p.Cys731ArgfsTer29
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20405_2394+20406delTG
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61722_2385+61723delTG
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27579_2394+27580delTG
  variant of: http://identifiers.org/hgnc/8674
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 8078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys731ArgfsTer29
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: CGT
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

5-140250882-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250882
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250882
    reference: chr 5
allele count: 1
allele frequency: 8.378296859814337e-6
allele num: 119356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47170G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41604G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82613G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40812G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13650G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83405G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61725G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61725G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2194G>A
  hgvsp: ENSP00000381636.2:p.Ala732Thr
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73945G>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12861G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34559G>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47170G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67706G>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20408G>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27582G>A
  variant of: http://identifiers.org/hgnc/8674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala732Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum

5-140250884-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250884
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250884
    reference: chr 5
allele count: 2
allele frequency: 1.676305422848043e-5
allele num: 119310
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67708G>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47172G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41606G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2196G>A
  hgvsp: ENST00000398640.2:c.2196G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47172G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12863G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34561G>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40814G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73947G>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82615G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27584G>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61727G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13652G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20410G>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83407G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61727G>A
  variant of: http://identifiers.org/hgnc/8670
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29227
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala732Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD

5-140250884-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250884
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250884
    reference: chr 5
allele count: 1
allele frequency: 8.381527114240214e-6
allele num: 119310
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83407G>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61727G>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47172G>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67708G>C
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47172G>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13652G>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41606G>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40814G>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82615G>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61727G>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2196G>C
  hgvsp: ENST00000398640.2:c.2196G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34561G>C
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73947G>C
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27584G>C
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20410G>C
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12863G>C
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala732Ala
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

5-140250886-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250886
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250886
    reference: chr 5
allele count: 1
allele frequency: 8.379701012267883e-6
allele num: 119336
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40816C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61729C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34563C>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47174C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2198C>T
  hgvsp: ENSP00000381636.2:p.Pro733Leu
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20412C>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73949C>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12865C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47174C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13654C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83409C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82617C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27586C>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67710C>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41608C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61729C>T
  variant of: http://identifiers.org/hgnc/8670
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro733Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

5-140250889-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250889
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250889
    reference: chr 5
allele count: 3
allele frequency: 2.511637252603731e-5
allele num: 119444
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27589G>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34566G>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67713G>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41611G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82620G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83412G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61732G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2201G>A
  hgvsp: ENSP00000381636.2:p.Gly734Glu
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73952G>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47177G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47177G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13657G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12868G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40819G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20415G>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61732G>A
  variant of: http://identifiers.org/hgnc/8670
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29366
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7842
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly734Glu
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

5-140250890-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250890
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250890
    reference: chr 5
allele count: 1
allele frequency: 8.370862701109976e-6
allele num: 119462
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41612G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83413G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61733G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12869G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61733G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13658G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82621G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47178G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67714G>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73953G>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20416G>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2202G>A
  hgvsp: ENST00000398640.2:c.2202G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27590G>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47178G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34567G>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40820G>A
  variant of: http://identifiers.org/hgnc/8672
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly734Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

5-140250891-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250891
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250891
    reference: chr 5
allele count: 3
allele frequency: 2.510082163356147e-5
allele num: 119518
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83414A>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61734A>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34568A>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2203A>T
  hgvsp: ENSP00000381636.2:p.Lys735Ter
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40821A>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47179A>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47179A>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61734A>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82622A>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41613A>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73954A>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20417A>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13659A>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12870A>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67715A>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27591A>T
  variant of: http://identifiers.org/hgnc/8674
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19119
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys735Ter
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/5-140250896-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250896
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250896
    reference: chr 5
allele count: 1
allele frequency: 8.367920739054759e-6
allele num: 119504
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82627C>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47184C>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67720C>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34573C>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12875C>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41618C>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61739C>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2208C>A
  hgvsp: ENST00000398640.2:c.2208C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47184C>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73959C>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61739C>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13664C>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40826C>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83419C>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20422C>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27596C>A
  variant of: http://identifiers.org/hgnc/8674
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro736Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

5-140250896-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250896
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250896
    reference: chr 5
allele count: 1
allele frequency: 8.367920739054759e-6
allele num: 119504
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82627C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61739C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34573C>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73959C>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47184C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27596C>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2208C>T
  hgvsp: ENST00000398640.2:c.2208C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67720C>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61739C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13664C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20422C>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12875C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41618C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47184C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83419C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40826C>T
  variant of: http://identifiers.org/hgnc/8672
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29362
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7765
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro736Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/5-140250898-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250898
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250898
    reference: chr 5
allele count: 2
allele frequency: 1.673220112105748e-5
allele num: 119530
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47186C>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61741C>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67722C>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40828C>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83421C>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27598C>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61741C>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2210C>A
  hgvsp: ENSP00000381636.2:p.Thr737Lys
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47186C>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20424C>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82629C>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34575C>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13666C>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73961C>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41620C>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12877C>A
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7754
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr737Lys
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ

5-140250899-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250899
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250899
    reference: chr 5
allele count: 1
allele frequency: 8.36372152152822e-6
allele num: 119564
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61742G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82630G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67723G>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12878G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47187G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20425G>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2211G>A
  hgvsp: ENST00000398640.2:c.2211G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47187G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34576G>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61742G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27599G>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41621G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13667G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40829G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83422G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73962G>A
  variant of: http://identifiers.org/hgnc/8668
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr737Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

5-140250899-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250899
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250899
    reference: chr 5
allele count: 1
allele frequency: 8.36372152152822e-6
allele num: 119564
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73962G>C
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13667G>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67723G>C
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41621G>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27599G>C
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61742G>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83422G>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61742G>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12878G>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2211G>C
  hgvsp: ENST00000398640.2:c.2211G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47187G>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34576G>C
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47187G>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20425G>C
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40829G>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82630G>C
  variant of: http://identifiers.org/hgnc/8663
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7727
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr737Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

5-140250903-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250903
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250903
    reference: chr 5
allele count: 1
allele frequency: 8.36456102783726e-6
allele num: 119552
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12882G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47191G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67727G>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2215G>A
  hgvsp: ENSP00000381636.2:p.Val739Met
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82634G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61746G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40833G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73966G>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20429G>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61746G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34580G>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27603G>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83426G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47191G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41625G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13671G>A
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Val739Met
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

5-140250904-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250904
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250904
    reference: chr 5
allele count: 1
allele frequency: 8.364141253617491e-6
allele num: 119558
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61747T>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61747T>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82635T>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2216T>A
  hgvsp: ENSP00000381636.2:p.Val739Glu
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47192T>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40834T>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47192T>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12883T>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67728T>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41626T>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20430T>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73967T>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83427T>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34581T>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13672T>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27604T>A
  variant of: http://identifiers.org/hgnc/8674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19584
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val739Glu
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD

5-140250910-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250910
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250910
    reference: chr 5
allele count: 1
allele frequency: 8.36470096194061e-6
allele num: 119550
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67734C>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61753C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47198C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27610C>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2222C>T
  hgvsp: ENSP00000381636.2:p.Ser741Phe
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47198C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82641C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13678C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34587C>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12889C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61753C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83433C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73973C>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20436C>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40840C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41632C>T
  variant of: http://identifiers.org/hgnc/8672
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19753
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser741Phe
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD

5-140250912-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250912
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250912
    reference: chr 5
allele count: 1
allele frequency: 8.367920739054759e-6
allele num: 119504
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82643C>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12891C>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67736C>G
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34589C>G
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73975C>G
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47200C>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61755C>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47200C>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61755C>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2224C>G
  hgvsp: ENSP00000381636.2:p.Arg742Gly
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20438C>G
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40842C>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41634C>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13680C>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27612C>G
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83435C>G
  variant of: http://identifiers.org/hgnc/8663
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29193
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg742Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

5-140250913-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250913
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250913
    reference: chr 5
allele count: 1
allele frequency: 8.364001338240215e-6
allele num: 119560
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2225G>T
  hgvsp: ENSP00000381636.2:p.Arg742Leu
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41635G>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40843G>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47201G>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82644G>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47201G>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27613G>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73976G>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61756G>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12892G>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67737G>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13681G>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20439G>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61756G>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83436G>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34590G>T
  variant of: http://identifiers.org/hgnc/8673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19897
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg742Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

5-140250931-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250931
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250931
    reference: chr 5
allele count: 3
allele frequency: 2.507438734913577e-5
allele num: 119644
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61774C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41653C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83454C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12910C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82662C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67755C>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47219C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34608C>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2243C>T
  hgvsp: ENSP00000381636.2:p.Ser748Leu
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61774C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27631C>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73994C>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47219C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13699C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20457C>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40861C>T
  variant of: http://identifiers.org/hgnc/8672
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser748Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-140250935-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250935
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250935
    reference: chr 5
allele count: 1
allele frequency: 8.362742310458446e-6
allele num: 119578
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+73998C>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47223C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61778C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61778C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83458C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2247C>T
  hgvsp: ENST00000398640.2:c.2247C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13703C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27635C>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41657C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40865C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82666C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20461C>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67759C>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34612C>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47223C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12914C>T
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29015
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr749Tyr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

5-140250938-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250938
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250938
    reference: chr 5
allele count: 8
allele frequency: 6.698147962088483e-5
allele num: 119436
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20464G>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34615G>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83461G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40868G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27638G>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67762G>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82669G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2250G>A
  hgvsp: ENST00000398640.2:c.2250G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47226G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13706G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61781G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12917G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47226G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61781G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74001G>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41660G>A
  variant of: http://identifiers.org/hgnc/8672
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20478
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser750Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum

5-140250941-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250941
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250941
    reference: chr 5
allele count: 10
allele frequency: 8.416658250008417e-5
allele num: 118812
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41663G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47229G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61784G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74004G>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27641G>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61784G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83464G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67765G>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2253G>A
  hgvsp: ENST00000398640.2:c.2253G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47229G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20467G>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13709G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12920G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82672G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34618G>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40871G>A
  variant of: http://identifiers.org/hgnc/8672
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28378
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7109
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln751Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

5-140250943-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250943
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250943
    reference: chr 5
allele count: 9
allele frequency: 7.567731194187983e-5
allele num: 118926
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34620A>G
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61786A>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82674A>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41665A>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83466A>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20469A>G
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12922A>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2255A>G
  hgvsp: ENSP00000381636.2:p.Gln752Arg
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47231A>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67767A>G
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13711A>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61786A>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27643A>G
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47231A>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74006A>G
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40873A>G
  variant of: http://identifiers.org/hgnc/8672
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20353
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln752Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum

5-140250948-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250948
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250948
    reference: chr 5
allele count: 1
allele frequency: 8.409863087428936e-6
allele num: 118908
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82679C>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13716C>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12927C>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41670C>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47236C>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2260C>G
  hgvsp: ENSP00000381636.2:p.Arg754Gly
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61791C>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67772C>G
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61791C>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74011C>G
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83471C>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47236C>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34625C>G
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40878C>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27648C>G
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20474C>G
  variant of: http://identifiers.org/hgnc/8675
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg754Gly
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

5-140250949-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250949
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250949
    reference: chr 5
allele count: 1
allele frequency: 8.411419342899921e-6
allele num: 118886
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34626G>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74012G>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61792G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20475G>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61792G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47237G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83472G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2261G>A
  hgvsp: ENSP00000381636.2:p.Arg754Gln
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47237G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12928G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40879G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27649G>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13717G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82680G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67773G>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41671G>A
  variant of: http://identifiers.org/hgnc/8672
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg754Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

5-140250949-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250949
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250949
    reference: chr 5
allele count: 2
allele frequency: 1.682283868579984e-5
allele num: 118886
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2261G>T
  hgvsp: ENSP00000381636.2:p.Arg754Leu
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41671G>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34626G>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82680G>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61792G>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40879G>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20475G>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61792G>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83472G>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67773G>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12928G>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47237G>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13717G>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74012G>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47237G>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27649G>T
  variant of: http://identifiers.org/hgnc/8674
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg754Leu
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ

5-140250961-G-GCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250961
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250963
    reference: chr 5
allele count: 3
allele frequency: 2.537684616555855e-5
allele num: 118218
alternate allele: GCT
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2276_2277dupCT
  hgvsp: ENSP00000381636.2:p.Glu760LeufsTer19
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61807_2385+61808dupCT
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47252_2352+47253dupCT
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40894_2394+40895dupCT
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20490_2394+20491dupCT
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41686_1602+41687dupCT
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13732_1599+13733dupCT
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74027_2388+74028dupCT
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47252_2352+47253dupCT
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82695_2394+82696dupCT
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67788_2394+67789dupCT
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61807_2385+61808dupCT
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27664_2394+27665dupCT
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83487_1602+83488dupCT
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34641_2355+34642dupCT
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12943_2388+12944dupCT
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21527
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27577
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6297
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu760LeufsTer19
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

5-140250964-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250964
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250964
    reference: chr 5
allele count: 3
allele frequency: 2.543278115939572e-5
allele num: 117958
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13732C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27664C>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41686C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12943C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82695C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47252C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67788C>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61807C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2276C>T
  hgvsp: ENSP00000381636.2:p.Ser759Phe
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34641C>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47252C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74027C>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20490C>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83487C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61807C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40894C>T
  variant of: http://identifiers.org/hgnc/8672
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser759Phe
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

5-140250967-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250967
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250967
    reference: chr 5
allele count: 1
allele frequency: 8.493290300662476e-6
allele num: 117740
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41689A>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47255A>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83490A>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82698A>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2279A>G
  hgvsp: ENSP00000381636.2:p.Glu760Gly
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20493A>G
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47255A>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61810A>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40897A>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67791A>G
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74030A>G
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34644A>G
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61810A>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13735A>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27667A>G
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12946A>G
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu760Gly
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

5-140250968-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250968
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250968
    reference: chr 5
allele count: 1
allele frequency: 8.49516625040352e-6
allele num: 117714
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47256G>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40898G>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34645G>C
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74031G>C
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20494G>C
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61811G>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12947G>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61811G>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83491G>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2280G>C
  hgvsp: ENSP00000381636.2:p.Glu760Asp
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67792G>C
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27668G>C
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82699G>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47256G>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41690G>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13736G>C
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21656
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu760Asp
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

5-140250971-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250971
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250971
    reference: chr 5
allele count: 1
allele frequency: 8.520209937972871e-6
allele num: 117368
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47259G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61814G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83494G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13739G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27671G>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82702G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47259G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20497G>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67795G>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40901G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34648G>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61814G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74034G>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2283G>A
  hgvsp: ENST00000398640.2:c.2283G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41693G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12950G>A
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6075
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu761Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

5-140250972-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250972
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250972
    reference: chr 5
allele count: 10
allele frequency: 8.535044894336144e-5
allele num: 117164
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2284G>A
  hgvsp: ENSP00000381636.2:p.Gly762Ser
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12951G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47260G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67796G>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61815G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82703G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41694G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40902G>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34649G>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47260G>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83495G>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61815G>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13740G>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27672G>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74035G>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20498G>A
  variant of: http://identifiers.org/hgnc/8675
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly762Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

5-140250978-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250978
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250978
    reference: chr 5
allele count: 4
allele frequency: 3.446730775859098e-5
allele num: 116052
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61821C>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74041C>G
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47266C>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20504C>G
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47266C>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61821C>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83501C>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67802C>G
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82709C>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12957C>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40908C>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2290C>G
  hgvsp: ENSP00000381636.2:p.Pro764Ala
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27678C>G
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13746C>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41700C>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34655C>G
  variant of: http://identifiers.org/hgnc/8673
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26767
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5735
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro764Ala
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

5-140250978-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250978
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250978
    reference: chr 5
allele count: 1
allele frequency: 8.616826939647745e-6
allele num: 116052
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47266C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40908C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47266C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67802C>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61821C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83501C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13746C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61821C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2290C>T
  hgvsp: ENSP00000381636.2:p.Pro764Ser
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34655C>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82709C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41700C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74041C>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27678C>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20504C>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12957C>T
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro764Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

5-140250979-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250979
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250979
    reference: chr 5
allele count: 1
allele frequency: 8.644835575227359e-6
allele num: 115676
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61822C>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41701C>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67803C>G
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82710C>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61822C>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27679C>G
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47267C>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34656C>G
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40909C>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83502C>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2291C>G
  hgvsp: ENSP00000381636.2:p.Pro764Arg
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74042C>G
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47267C>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20505C>G
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13747C>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12958C>G
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5687
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro764Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

5-140250985-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140250985
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140250985
    reference: chr 5
allele count: 29
allele frequency: 2.541630148992112e-4
allele num: 114100
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82716C>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34662C>G
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47273C>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74048C>G
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83508C>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41707C>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40915C>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13753C>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67809C>G
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2297C>G
  hgvsp: ENSP00000381636.2:p.Thr766Arg
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20511C>G
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61828C>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12964C>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47273C>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27685C>G
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61828C>G
  variant of: http://identifiers.org/hgnc/8670
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5498
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 25854
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20248
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr766Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

5-140251010-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140251010
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140251010
    reference: chr 5
allele count: 1
allele frequency: 1.029272510189798e-5
allele num: 97156
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2322T>A
  hgvsp: ENSP00000381636.2:p.Ser774Arg
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61853T>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47298T>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40940T>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34687T>A
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74073T>A
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41732T>A
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20536T>A
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12989T>A
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82741T>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83533T>A
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67834T>A
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61853T>A
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27710T>A
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47298T>A
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13778T>A
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13624
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser774Arg
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

5-140251012-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140251012
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140251012
    reference: chr 5
allele count: 1
allele frequency: 1.059883412824589e-5
allele num: 94350
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74075T>C
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83535T>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41734T>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40942T>C
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12991T>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47300T>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47300T>C
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2324T>C
  hgvsp: ENSP00000381636.2:p.Leu775Pro
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27712T>C
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20538T>C
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61855T>C
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82743T>C
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13780T>C
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67836T>C
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34689T>C
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61855T>C
  variant of: http://identifiers.org/hgnc/8670
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13011
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu775Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

5-140251017-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140251017
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140251017
    reference: chr 5
allele count: 1
allele frequency: 1.108917917895717e-5
allele num: 90178
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2329C>T
  hgvsp: ENST00000398640.2:c.2329C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40947C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82748C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83540C>T
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67841C>T
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41739C>T
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12996C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74080C>T
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47305C>T
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61860C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34694C>T
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13785C>T
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27717C>T
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20543C>T
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61860C>T
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47305C>T
  variant of: http://identifiers.org/hgnc/8671
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11229
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu777Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

5-140251019-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140251019
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140251019
    reference: chr 5
allele count: 3
allele frequency: 3.433830094086945e-5
allele num: 87366
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204961
  ensembl protein: ENSP00000436042
  ensembl transcript: ENST00000532602
  gene symbol: PCDHA9
  hgvsc: ENST00000532602.1:c.2394+20545A>G
  variant of: http://identifiers.org/hgnc/8675
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000249158
  ensembl protein: ENSP00000381636
  ensembl transcript: ENST00000398640
  gene symbol: PCDHA11
  hgvsc: ENST00000398640.2:c.2331A>G
  hgvsp: ENST00000398640.2:c.2331A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8665
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000434113
  ensembl transcript: ENST00000527624
  gene symbol: PCDHA6
  hgvsc: ENST00000527624.1:c.1602+41741A>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204969
  ensembl protein: ENSP00000431748
  ensembl transcript: ENST00000526136
  gene symbol: PCDHA2
  hgvsc: ENST00000526136.1:c.2388+74082A>G
  variant of: http://identifiers.org/hgnc/8668
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000433416
  ensembl transcript: ENST00000529619
  gene symbol: PCDHA5
  hgvsc: ENST00000529619.1:c.2352+47307A>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000420840
  ensembl transcript: ENST00000504120
  gene symbol: PCDHA1
  hgvsc: ENST00000504120.2:c.2394+82750A>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000435300
  ensembl transcript: ENST00000530339
  gene symbol: PCDHA4
  hgvsc: ENST00000530339.1:c.2385+61862A>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204965
  ensembl protein: ENSP00000436557
  ensembl transcript: ENST00000529859
  gene symbol: PCDHA5
  hgvsc: ENST00000529859.1:c.2352+47307A>G
  variant of: http://identifiers.org/hgnc/8671
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000255408
  ensembl protein: ENSP00000429808
  ensembl transcript: ENST00000522353
  gene symbol: PCDHA3
  hgvsc: ENST00000522353.2:c.2394+67843A>G
  variant of: http://identifiers.org/hgnc/8669
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204962
  ensembl protein: ENSP00000434655
  ensembl transcript: ENST00000531613
  gene symbol: PCDHA8
  hgvsc: ENST00000531613.1:c.2394+27719A>G
  variant of: http://identifiers.org/hgnc/8674
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204970
  ensembl protein: ENSP00000378129
  ensembl transcript: ENST00000394633
  gene symbol: PCDHA1
  hgvsc: ENST00000394633.3:c.1602+83542A>G
  variant of: http://identifiers.org/hgnc/8663
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081842
  ensembl protein: ENSP00000433378
  ensembl transcript: ENST00000529310
  gene symbol: PCDHA6
  hgvsc: ENST00000529310.1:c.2394+40949A>G
  variant of: http://identifiers.org/hgnc/8672
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204963
  ensembl protein: ENSP00000436426
  ensembl transcript: ENST00000525929
  gene symbol: PCDHA7
  hgvsc: ENST00000525929.1:c.2355+34696A>G
  variant of: http://identifiers.org/hgnc/8673
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000204967
  ensembl protein: ENSP00000423470
  ensembl transcript: ENST00000512229
  gene symbol: PCDHA4
  hgvsc: ENST00000512229.2:c.2385+61862A>G
  variant of: http://identifiers.org/hgnc/8670
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000304234
  ensembl transcript: ENST00000307360
  gene symbol: PCDHA10
  hgvsc: ENST00000307360.5:c.2388+12998A>G
  variant of: http://identifiers.org/hgnc/8664
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000250120
  ensembl protein: ENSP00000421030
  ensembl transcript: ENST00000506939
  gene symbol: PCDHA10
  hgvsc: ENST00000506939.2:c.1599+13787A>G
  variant of: http://identifiers.org/hgnc/8664
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu777Leu
num of homozygotes: 0
reference allele: A

GenotypeDepth
all individuals: 779
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 18813
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8634
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 495
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 133
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 116
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1912
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 822
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45340
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2047
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7808
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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African
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South Asian
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European (Finnish)
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QD
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InbreedingCoeff
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VQSLOD
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MQ
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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FS
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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Other
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European (Finnish)
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South Asian
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East Asian
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MQ
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QD
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FS
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MQRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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European (Finnish)
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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African
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Other
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ReadPosRankSum
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DP
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BaseQRankSum
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FS
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MQ
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Other
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African
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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MQRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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QD
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FS
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Other
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BaseQRankSum
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FS
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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VQSLOD
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ClippingRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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South Asian
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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ReadPosRankSum
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FS
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MQRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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DP
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ClippingRankSum
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QD
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GenotypeQuality
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African
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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allele frequency: 0.0e0
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East Asian
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BaseQRankSum
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FS
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VQSLOD
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ClippingRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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BaseQRankSum
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FS
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DP
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ClippingRankSum
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MQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

East Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

South Asian
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DP
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SIO_000300: 1.591604e6

FS
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQ
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QD
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ClippingRankSum
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SIO_000300: 3.08e-1

MQRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 65586
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Other
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Latino
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European (Finnish)
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African
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East Asian
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South Asian
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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FS
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DP
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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East Asian
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Latino
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African
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South Asian
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FS
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VQSLOD
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DP
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BaseQRankSum
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MQRankSum
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QD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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East Asian
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InbreedingCoeff
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QD
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MQRankSum
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FS
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ClippingRankSum
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MQ
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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Other
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Latino
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allele frequency: 0.0e0
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South Asian
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VQSLOD
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BaseQRankSum
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MQ
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FS
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DP
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QD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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East Asian
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European (Non-Finnish)
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Other
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VQSLOD
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ReadPosRankSum
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MQ
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DP
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BaseQRankSum
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QD
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MQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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European (Non-Finnish)
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QD
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DP
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VQSLOD
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FS
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MQ
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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Latino
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Other
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European (Non-Finnish)
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BaseQRankSum
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VQSLOD
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MQ
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QD
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DP
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FS
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
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num of homozygotes: 0

African
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European (Non-Finnish)
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Latino
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East Asian
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Other
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South Asian
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QD
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FS
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VQSLOD
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MQRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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DP
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MQ
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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Other
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European (Non-Finnish)
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African
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allele frequency: 5.985634477254589e-4
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QD
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MQ
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DP
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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European (Non-Finnish)
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InbreedingCoeff
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VQSLOD
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FS
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ReadPosRankSum
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QD
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DP
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ClippingRankSum
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MQRankSum
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MQ
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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num of homozygotes: 0

South Asian
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East Asian
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allele num: 8594
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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Other
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ReadPosRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
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DP
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

Latino
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Other
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African
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East Asian
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European (Finnish)
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South Asian
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BaseQRankSum
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DP
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QD
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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South Asian
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European (Non-Finnish)
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European (Finnish)
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East Asian
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QD
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ReadPosRankSum
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DP
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VQSLOD
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FS
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MQRankSum
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MQ
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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European (Non-Finnish)
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South Asian
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East Asian
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MQRankSum
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VQSLOD
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MQ
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FS
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DP
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.529239050648397e-5
allele num: 65392
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.736e0

VQSLOD
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SIO_000300: 1.08e0

ReadPosRankSum
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SIO_000300: -1.725e0

QD
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SIO_000300: 1.416e1

MQ
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SIO_000300: 6.09e1

DP
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SIO_000300: 1.568561e6

MQRankSum
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SIO_000300: 1.12e0

InbreedingCoeff
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SIO_000300: 5.0e-4

BaseQRankSum
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SIO_000300: 2.11e-1

ClippingRankSum
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SIO_000300: 5.21e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 1.006036217303823e-4
allele num: 9940
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 5.999999999999999e-4

MQRankSum
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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DP
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QD
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MQ
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FS
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.528911720637251e-5
allele num: 65406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.071645415907711e-5
allele num: 16470
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 3.0e-3

ReadPosRankSum
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SIO_000300: -3.03e-1

MQRankSum
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FS
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SIO_000300: 2.884e0

ClippingRankSum
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MQ
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SIO_000300: 6.0e1

VQSLOD
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SIO_000300: -6.056e-1

BaseQRankSum
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SIO_000300: 1.11e0

DP
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SIO_000300: 1.565454e6

QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 65406
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 2.884e0

MQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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QD
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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DP
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SIO_000300: 1.565454e6

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65422
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele num: 9940
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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MQRankSum
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SIO_000300: 6.66e-1

MQ
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ClippingRankSum
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FS
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VQSLOD
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InbreedingCoeff
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QD
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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Latino
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European (Non-Finnish)
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East Asian
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African
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European (Finnish)
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MQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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InbreedingCoeff
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FS
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BaseQRankSum
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ClippingRankSum
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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QD
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ClippingRankSum
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DP
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FS
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VQSLOD
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InbreedingCoeff
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MQ
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 3.498950314905528e-4
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num of homozygotes: 0

African
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South Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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Other
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MQRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQ
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BaseQRankSum
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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European (Finnish)
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South Asian
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Latino
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Other
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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DP
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FS
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MQ
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QD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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African
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Other
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East Asian
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Latino
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European (Non-Finnish)
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MQ
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DP
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VQSLOD
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ReadPosRankSum
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FS
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QD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Other
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South Asian
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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QD
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MQRankSum
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ClippingRankSum
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FS
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BaseQRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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African
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European (Non-Finnish)
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DP
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BaseQRankSum
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QD
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FS
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MQ
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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VQSLOD
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MQ
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ClippingRankSum
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FS
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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QD
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.524855138761818e-5
allele num: 65580
num of homozygotes: 0

South Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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Other
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InbreedingCoeff
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DP
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ReadPosRankSum
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VQSLOD
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MQRankSum
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MQ
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ClippingRankSum
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FS
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 65592
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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VQSLOD
type: SiteQuality
SIO_000300: 8.73e-1

MQ
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SIO_000300: 6.0e1

ReadPosRankSum
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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FS
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SIO_000300: 1.343e0

QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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Other
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DP
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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FS
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Other
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East Asian
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Latino
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European (Finnish)
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DP
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FS
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BaseQRankSum
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QD
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ReadPosRankSum
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MQ
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VQSLOD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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European (Finnish)
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South Asian
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InbreedingCoeff
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MQRankSum
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QD
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VQSLOD
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FS
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ClippingRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Latino
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.568156900962358e-5
allele num: 65672
num of homozygotes: 0

East Asian
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MQRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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MQ
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VQSLOD
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FS
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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Latino
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African
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East Asian
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FS
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DP
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BaseQRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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MQ
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QD
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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Latino
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African
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allele frequency: 8.049909438518816e-4
allele num: 9938
num of homozygotes: 0

South Asian
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InbreedingCoeff
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ReadPosRankSum
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DP
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ClippingRankSum
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MQRankSum
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VQSLOD
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QD
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MQ
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FS
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BaseQRankSum
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SIO_000300: -5.55e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 65288
num of homozygotes: 0

East Asian
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South Asian
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Other
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Latino
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African
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European (Finnish)
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MQRankSum
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ClippingRankSum
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MQ
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FS
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InbreedingCoeff
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QD
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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African
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European (Non-Finnish)
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Latino
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Other
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ReadPosRankSum
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FS
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InbreedingCoeff
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DP
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BaseQRankSum
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QD
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MQ
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ClippingRankSum
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VQSLOD
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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African
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VQSLOD
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FS
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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BaseQRankSum
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FS
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MQ
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ClippingRankSum
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VQSLOD
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QD
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InbreedingCoeff
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SIO_000300: 1.8e-3

MQRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.06044376434583e-5
allele num: 65350
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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VQSLOD
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ClippingRankSum
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QD
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 2
allele frequency: 3.114294612270321e-4
allele num: 6422
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.538319539734794e-5
allele num: 65006
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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MQ
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SIO_000300: 6.08e1

DP
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InbreedingCoeff
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QD
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ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 4.204e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.582e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.77e-1

VQSLOD
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
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allele num: 64886
num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 0.0e0
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Other
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.01e-1

VQSLOD
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MQRankSum
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MQ
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ClippingRankSum
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FS
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DP
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InbreedingCoeff
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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African
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East Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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QD
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FS
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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African
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Other
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East Asian
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Latino
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DP
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VQSLOD
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MQRankSum
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QD
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FS
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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MQ
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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South Asian
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allele frequency: 6.156877231867996e-5
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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QD
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MQ
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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Latino
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Other
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South Asian
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VQSLOD
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QD
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ClippingRankSum
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ReadPosRankSum
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DP
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MQ
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MQRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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Other
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ClippingRankSum
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SIO_000300: -8.99e-1

FS
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VQSLOD
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MQRankSum
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MQ
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BaseQRankSum
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DP
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ReadPosRankSum
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QD
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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African
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 63856
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MQ
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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BaseQRankSum
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QD
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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Other
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African
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South Asian
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Latino
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allele num: 10906
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East Asian
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ClippingRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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MQRankSum
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DP
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QD
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MQ
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 4

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Latino
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South Asian
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Other
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European (Non-Finnish)
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African
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QD
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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BaseQRankSum
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ReadPosRankSum
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FS
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 8000
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 6868
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 53376
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele count: 0
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QD
type: SiteQuality
SIO_000300: 7.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e0

MQRankSum
type: SiteQuality
SIO_000300: -3.43e-1

DP
type: SiteQuality
SIO_000300: 1.175417e6

MQ
type: SiteQuality
SIO_000300: 5.809e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

FS
type: SiteQuality
SIO_000300: 6.306e0

VQSLOD
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SIO_000300: -2.801e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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bin: 2.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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bin: 4.75e1
variant carriers: 0

GenotypeDepth
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bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 9.25e1
variant carriers: 1

GenotypeDepth
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bin: 3.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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num of homozygotes: 0

Latino
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South Asian
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MQ
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SIO_000300: 6.0e1

MQRankSum
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FS
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SIO_000300: 1.0e0

VQSLOD
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BaseQRankSum
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SIO_000300: 4.46e0

ReadPosRankSum
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SIO_000300: 5.11e-1

DP
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SIO_000300: 1.132944e6

InbreedingCoeff
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SIO_000300: -1.5e-3

ClippingRankSum
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SIO_000300: -1.294e0

QD
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SIO_000300: 6.18e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 49350
num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.96e-1

DP
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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SIO_000300: -3.5e-3

ClippingRankSum
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SIO_000300: 2.96e-1

MQRankSum
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SIO_000300: 2.96e-1

MQ
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SIO_000300: 6.0e1

QD
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