7-33014374-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014374
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014374
    reference: chr 7
allele count: 2
allele frequency: 1.653029175964956e-5
allele num: 120990
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.526T>G
  hgvsp: ENSP00000439250.1:p.Ser176Ala
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-420T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.503T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54848T>G
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-420T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.168T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.367T>G
  hgvsp: ENSP00000242209.4:p.Ser123Ala
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3235
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4585
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2447
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1549
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser123Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-33014380-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014380
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014380
    reference: chr 7
allele count: 1
allele frequency: 8.286239870071759e-6
allele num: 120682
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.526+6C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.503+6C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-414C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.367+6C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54842C>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-414C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.174C>A
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26467
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2447
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4575
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8335
  bin: 9.75e1
  variant carriers: 1
hgvs: c.367+6C>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

7-33014391-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014391
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014391
    reference: chr 7
allele count: 3
allele frequency: 2.503755633450175e-5
allele num: 119820
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.526+17C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-403C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.367+17C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54831C>G
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.503+17C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.185C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-403C>G
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7357
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14074
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4054
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7868
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8340
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2325
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3102
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

7-33014391-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014391
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014391
    reference: chr 7
allele count: 17
allele frequency: 1.418794858955099e-4
allele num: 119820
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54831C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.367+17C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-403C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.185C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.526+17C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-403C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.503+17C>T
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14074
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17290
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4054
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7357
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23060
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2325
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4505
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7868
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3102
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

7-33014392-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014392
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014392
    reference: chr 7
allele count: 6
allele frequency: 5.006508460999299e-5
allele num: 119844
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.186G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-402G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.503+18G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-402G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.367+18G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54830G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.526+18G>A
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17347
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3624
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7850
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2345
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2440
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP

7-33014392-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014392
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014392
    reference: chr 7
allele count: 4
allele frequency: 3.337672307332866e-5
allele num: 119844
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-402G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.526+18G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-402G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.503+18G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.367+18G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54830G>C
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.186G>C
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7336
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2440
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23236
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2345
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7850
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/7-33014400-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014400
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014400
    reference: chr 7
allele count: 1
allele frequency: 8.402937667008386e-6
allele num: 119006
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54822A>C
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-394A>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.367+26A>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.526+26A>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.503+26A>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.194A>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-394A>C
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6825
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7072
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16032
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2089
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18796
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3608
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1538
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2439
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8311
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2964
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

7-33014403-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014403
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014403
    reference: chr 7
allele count: 1
allele frequency: 8.41864224137931e-6
allele num: 118784
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.367+29C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-391C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54819C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.503+29C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-391C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.197C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.526+29C>T
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7242
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2437
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8311
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1416
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3100
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3601
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3023
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18238
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

7-33014404-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014404
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014404
    reference: chr 7
allele count: 15807
allele frequency: 1.358876929954266e-1
allele num: 116324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.198G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-390G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-390G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.503+30G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54818G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.526+30G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.367+30G>A
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6504
  bin: 2.25e1
  variant carriers: 2196
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.5e0
  variant carriers: 260
genotype depth: GenotypeDepth
  all individuals: 15836
  bin: 2.75e1
  variant carriers: 2677
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.75e1
  variant carriers: 166
genotype depth: GenotypeDepth
  all individuals: 4726
  bin: 1.25e1
  variant carriers: 1015
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 1.75e1
  variant carriers: 1767
genotype depth: GenotypeDepth
  all individuals: 3857
  bin: 4.25e1
  variant carriers: 1155
genotype depth: GenotypeDepth
  all individuals: 12507
  bin: 3.25e1
  variant carriers: 2529
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.75e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 4.75e1
  variant carriers: 624
genotype depth: GenotypeDepth
  all individuals: 6933
  bin: 3.75e1
  variant carriers: 1863
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.25e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 347
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.75e1
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 2560
  bin: 7.25e1
  variant carriers: 282
genotype quality: GenotypeQuality
  all individuals: 3582
  bin: 7.75e1
  variant carriers: 328
genotype quality: GenotypeQuality
  all individuals: 2854
  bin: 8.25e1
  variant carriers: 294
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 1.75e1
  variant carriers: 176
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 4.75e1
  variant carriers: 415
genotype quality: GenotypeQuality
  all individuals: 1508
  bin: 3.25e1
  variant carriers: 321
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 7.5e0
  variant carriers: 137
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 5.75e1
  variant carriers: 303
genotype quality: GenotypeQuality
  all individuals: 16555
  bin: 6.25e1
  variant carriers: 347
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 3.75e1
  variant carriers: 416
num of homozygotes: 1437
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

7-33014404-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014404
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014404
    reference: chr 7
allele count: 29
allele frequency: 2.493036690622743e-4
allele num: 116324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.503+30G>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.367+30G>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-390G>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-390G>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54818G>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.526+30G>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.198G>T
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15836
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6504
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3857
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6933
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4726
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12507
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3582
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6108
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2560
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2862
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2854
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

7-33014406-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014406
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014406
    reference: chr 7
allele count: 1
allele frequency: 8.554759012438619e-6
allele num: 116894
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54816C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.526+32C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.367+32C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.200C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-388C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.503+32C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-388C>T
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17033
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11719
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2604
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6368
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2944
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/7-33014406-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014406
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014406
    reference: chr 7
allele count: 1
allele frequency: 8.554759012438619e-6
allele num: 116894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-388C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.526+32C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.367+32C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54816C>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.200C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-388C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.503+32C>A
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2839
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11719
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5495
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1767
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1114
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2604
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6368
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/7-33014426-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014426
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014426
    reference: chr 7
allele count: 1
allele frequency: 8.925702452783034e-6
allele num: 112036
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.220C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54796C>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.367+52C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.503+52C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-368C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.526+52C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-368C>A
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7475
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4445
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3889
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2272
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2460
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1791
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5839
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6355
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

7-33014746-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014746
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014746
    reference: chr 7
allele count: 1
allele frequency: 8.62931897414656e-6
allele num: 115884
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.368-48C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54476C>G
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-48C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.540C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-48C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.504-48C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.527-48C>G
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4929
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1946
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1817
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2619
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6322
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2043
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1658
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1933
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

7-33014749-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014749
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014749
    reference: chr 7
allele count: 2
allele frequency: 1.72226719253225e-5
allele num: 116126
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-45G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-45G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.504-45G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.527-45G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.368-45G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.543G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54473G>C
  variant of: http://identifiers.org/hgnc/28994
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14989
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30896
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1656
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2001
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

7-33014754-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014754
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014754
    reference: chr 7
allele count: 1
allele frequency: 8.592689339909605e-6
allele num: 116378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-40G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54468G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.548G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-40G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.527-40G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.504-40G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.368-40G>A
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1494
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

7-33014759-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014759
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014759
    reference: chr 7
allele count: 1
allele frequency: 8.562230289745873e-6
allele num: 116792
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-35A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-35A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.368-35A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.527-35A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.553A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.504-35A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54463A>G
  variant of: http://identifiers.org/hgnc/28994
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34825
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6540
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ

7-33014763-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014763
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014763
    reference: chr 7
allele count: 1
allele frequency: 8.540730744922536e-6
allele num: 117086
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-31G>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54459G>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.557G>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-31G>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.504-31G>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.368-31G>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.527-31G>T
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8090
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1617
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35657
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2067
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2009
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

7-33014769-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014769
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014769
    reference: chr 7
allele count: 4
allele frequency: 3.397200706617747e-5
allele num: 117744
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.368-25T>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.563T>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-25T>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.527-25T>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.504-25T>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54453T>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-25T>A
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19343
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1825
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36954
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1628
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2583
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

7-33014770-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014770
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014770
    reference: chr 7
allele count: 4619
allele frequency: 3.913146613802335e-2
allele num: 118038
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54452C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.368-24C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-24C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-24C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.564C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.504-24C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.527-24C>T
  variant of: http://identifiers.org/hgnc/3725
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21081
  bin: 2.75e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 5.25e1
  variant carriers: 418
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 5.75e1
  variant carriers: 403
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 4.25e1
  variant carriers: 419
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 1.25e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 3.75e1
  variant carriers: 333
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 6.25e1
  variant carriers: 367
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 7.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 18479
  bin: 2.25e1
  variant carriers: 156
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.75e1
  variant carriers: 151
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.75e1
  variant carriers: 318
genotype depth: GenotypeDepth
  all individuals: 7566
  bin: 3.25e1
  variant carriers: 213
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 4.75e1
  variant carriers: 458
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 274
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.75e1
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.25e1
  variant carriers: 187
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8222
  bin: 9.75e1
  variant carriers: 4274
genotype quality: GenotypeQuality
  all individuals: 1617
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6218
  bin: 6.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 3.25e1
  variant carriers: 4
num of homozygotes: 271
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

7-33014791-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014791
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014791
    reference: chr 7
allele count: 3
allele frequency: 2.500083336111204e-5
allele num: 119996
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.585T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.527-3T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.371-3T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54431T>C
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.504-3T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.368-3T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-47-3T>C
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8404
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2462
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6934
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.25e1
  variant carriers: 0
hgvs: c.368-3T>C
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

7-33014803-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014803
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014804
    reference: chr 7
allele count: 2
allele frequency: 1.655492095025246e-5
allele num: 120810
alternate allele: TC
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.384dupC
  hgvsp: ENSP00000242209.4:p.Asn129GlnfsTer7
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-31dupC
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54412dupC
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.520dupC
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.543dupC
  hgvsp: ENSP00000439250.1:p.Asn182GlnfsTer7
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.604dupC
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.387dupC
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8494
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4324
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2064
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7016
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asn129GlnfsTer7
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

7-33014806-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014806
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014806
    reference: chr 7
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.600C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.539C>G
  hgvsp: ENSP00000439250.1:p.Pro180Arg
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.380C>G
  hgvsp: ENSP00000242209.4:p.Pro127Arg
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-35C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54416C>G
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.383C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.516C>G
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1451
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2471
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2062
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro127Arg
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

7-33014824-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014824
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014823
    reference: chr 7
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54394delT
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.402delT
  hgvsp: ENSP00000242209.4:p.Phe134LeufsTer5
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-13delT
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.538delT
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.622delT
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.405delT
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.561delT
  hgvsp: ENSP00000439250.1:p.Phe187LeufsTer5
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4349
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41617
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2069
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Phe134LeufsTer5
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: AT
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

7-33014832-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014832
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014832
    reference: chr 7
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.542G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54390G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.409G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.406G>A
  hgvsp: ENSP00000242209.4:p.Val136Ile
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.565G>A
  hgvsp: ENSP00000439250.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.626G>A
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7128
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4349
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val136Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

7-33014848-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014848
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014848
    reference: chr 7
allele count: 1
allele frequency: 8.240490473993011e-6
allele num: 121352
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.425T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.8T>C
  hgvsp: ENSP00000437504.1:p.Ile3Thr
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.642T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.558T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54374T>C
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.581T>C
  hgvsp: ENSP00000439250.1:p.Ile194Thr
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.422T>C
  hgvsp: ENSP00000242209.4:p.Ile141Thr
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41707
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1443
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile141Thr
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

7-33014861-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014861
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014861
    reference: chr 7
allele count: 2
allele frequency: 1.64774506088418e-5
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.21A>G
  hgvsp: ENST00000538443.1:c.21A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.571A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.9A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.438A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54361A>G
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.594A>G
  hgvsp: ENST00000538336.1:c.594A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.655A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.435A>G
  hgvsp: ENST00000242209.4:c.435A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1443
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41720
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu145Glu
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/7-33014871-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014871
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014871
    reference: chr 7
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.19C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.581C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.448C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.604C>A
  hgvsp: ENSP00000439250.1:p.Gln202Lys
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.445C>A
  hgvsp: ENSP00000242209.4:p.Gln149Lys
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.665C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.31C>A
  hgvsp: ENSP00000437504.1:p.Gln11Lys
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54351C>A
  variant of: http://identifiers.org/hgnc/28994
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7141
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1443
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln149Lys
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

7-33014873-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014873
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014873
    reference: chr 7
allele count: 24
allele frequency: 1.977196335596125e-4
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.450G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54349G>C
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.583G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.667G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.447G>C
  hgvsp: ENSP00000242209.4:p.Gln149His
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.21G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.33G>C
  hgvsp: ENSP00000437504.1:p.Gln11His
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.606G>C
  hgvsp: ENSP00000439250.1:p.Gln202His
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln149His
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

7-33014874-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014874
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014874
    reference: chr 7
allele count: 3
allele frequency: 2.471454698235381e-5
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.22A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.668A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.607A>G
  hgvsp: ENSP00000439250.1:p.Ile203Val
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.584A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.448A>G
  hgvsp: ENSP00000242209.4:p.Ile150Val
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.34A>G
  hgvsp: ENSP00000437504.1:p.Ile12Val
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54348A>G
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.451A>G
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24132
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7141
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41722
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile150Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

7-33014879-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014879
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014879
    reference: chr 7
allele count: 3
allele frequency: 2.471495419495156e-5
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.453C>T
  hgvsp: ENST00000242209.4:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.589C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.27C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.456C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.39C>T
  hgvsp: ENST00000538443.1:c.39C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.673C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.612C>T
  hgvsp: ENST00000538336.1:c.612C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54343C>T
  variant of: http://identifiers.org/hgnc/28994
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8540
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4342
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His151His
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-33014881-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014881
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014881
    reference: chr 7
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54341C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.458C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.455C>T
  hgvsp: ENSP00000242209.4:p.Thr152Ile
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.614C>T
  hgvsp: ENSP00000439250.1:p.Thr205Ile
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.591C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.29C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.41C>T
  hgvsp: ENSP00000437504.1:p.Thr14Ile
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.675C>T
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7144
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2472
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr152Ile
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

7-33014893-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014893
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014893
    reference: chr 7
allele count: 55
allele frequency: 4.531597594133641e-4
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.41C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.603C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.467C>T
  hgvsp: ENSP00000242209.4:p.Pro156Leu
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.626C>T
  hgvsp: ENSP00000439250.1:p.Pro209Leu
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.470C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.53C>T
  hgvsp: ENSP00000437504.1:p.Pro18Leu
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54329C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.687C>T
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 24121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4373
  bin: 9.75e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro156Leu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

7-33014896-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014896
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014896
    reference: chr 7
allele count: 2
allele frequency: 1.647826516824309e-5
allele num: 121372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.44C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.56C>T
  hgvsp: ENSP00000437504.1:p.Pro19Leu
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54326C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.473C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.690C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.629C>T
  hgvsp: ENSP00000439250.1:p.Pro210Leu
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.606C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.470C>T
  hgvsp: ENSP00000242209.4:p.Pro157Leu
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2461
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro157Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

7-33014920-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014920
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014920
    reference: chr 7
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.630T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.80T>C
  hgvsp: ENSP00000437504.1:p.Val27Ala
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54302T>C
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.497T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.68T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.494T>C
  hgvsp: ENSP00000242209.4:p.Val165Ala
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.653T>C
  hgvsp: ENSP00000439250.1:p.Val218Ala
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.714T>C
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24169
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1439
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val165Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

7-33014921-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014921
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014921
    reference: chr 7
allele count: 4
allele frequency: 3.295978905735003e-5
allele num: 121360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.69G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.498G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54301G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.495G>A
  hgvsp: ENST00000242209.4:c.495G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.715G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.81G>A
  hgvsp: ENST00000538443.1:c.81G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.631G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.654G>A
  hgvsp: ENST00000538336.1:c.654G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24169
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1438
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val165Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-33014936-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014936
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014936
    reference: chr 7
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.96G>A
  hgvsp: ENST00000538443.1:c.96G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54286G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.513G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.510G>A
  hgvsp: ENST00000242209.4:c.510G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.730G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.84G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.669G>A
  hgvsp: ENST00000538336.1:c.669G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.646G>A
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1438
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg170Arg
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

7-33014941-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014941
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014941
    reference: chr 7
allele count: 2
allele frequency: 1.64836976230508e-5
allele num: 121332
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.101A>G
  hgvsp: ENSP00000437504.1:p.His34Arg
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54281A>G
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.515A>G
  hgvsp: ENSP00000242209.4:p.His172Arg
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.735A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.89A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.651A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.518A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.674A>G
  hgvsp: ENSP00000439250.1:p.His225Arg
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20588
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8540
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4321
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1438
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His172Arg
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

7-33014949-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014949
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014949
    reference: chr 7
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.682G>A
  hgvsp: ENSP00000439250.1:p.Gly228Arg
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.659G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.743G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.109G>A
  hgvsp: ENSP00000437504.1:p.Gly37Arg
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54273G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.526G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.523G>A
  hgvsp: ENSP00000242209.4:p.Gly175Arg
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.97G>A
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1436
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly175Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ

7-33014953-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014953
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014953
    reference: chr 7
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54269C>G
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.747C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.113C>G
  hgvsp: ENSP00000437504.1:p.Thr38Arg
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.527C>G
  hgvsp: ENSP00000242209.4:p.Thr176Arg
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.686C>G
  hgvsp: ENSP00000439250.1:p.Thr229Arg
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.663C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.101C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.530C>G
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41551
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4314
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr176Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

7-33014953-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014953
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014953
    reference: chr 7
allele count: 3
allele frequency: 2.474063566939913e-5
allele num: 121258
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.530C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.663C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.686C>T
  hgvsp: ENSP00000439250.1:p.Thr229Met
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.113C>T
  hgvsp: ENSP00000437504.1:p.Thr38Met
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.527C>T
  hgvsp: ENSP00000242209.4:p.Thr176Met
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.747C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54269C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.101C>T
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20445
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8563
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr176Met
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

7-33014954-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014954
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014954
    reference: chr 7
allele count: 8
allele frequency: 6.597720487571544e-5
allele num: 121254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.748G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.528G>A
  hgvsp: ENST00000242209.4:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.531G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.687G>A
  hgvsp: ENST00000538336.1:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.114G>A
  hgvsp: ENST00000538443.1:c.114G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54268G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.664G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.102G>A
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8556
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24232
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr176Thr
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

7-33014960-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014960
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014960
    reference: chr 7
allele count: 2
allele frequency: 1.649892756970797e-5
allele num: 121220
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.120G>A
  hgvsp: ENST00000538443.1:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.108G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.693G>A
  hgvsp: ENST00000538336.1:c.693G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.754G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.670G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.534G>A
  hgvsp: ENST00000242209.4:c.534G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54262G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.537G>A
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2052
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu178Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

7-33014963-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014963
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014963
    reference: chr 7
allele count: 13
allele frequency: 1.072855115043079e-4
allele num: 121172
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.537C>T
  hgvsp: ENST00000242209.4:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.540C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.696C>T
  hgvsp: ENST00000538336.1:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.673C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.123C>T
  hgvsp: ENST00000538443.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.757C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54259C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.111C>T
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8545
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24205
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20349
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asp179Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

7-33014964-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014964
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014964
    reference: chr 7
allele count: 2
allele frequency: 1.650655310158133e-5
allele num: 121164
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54258G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.124G>A
  hgvsp: ENSP00000437504.1:p.Gly42Arg
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.541G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.697G>A
  hgvsp: ENSP00000439250.1:p.Gly233Arg
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.758G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.112G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.674G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.538G>A
  hgvsp: ENSP00000242209.4:p.Gly180Arg
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7050
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2441
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly180Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/7-33014980-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014980
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014980
    reference: chr 7
allele count: 1
allele frequency: 8.272256506129742e-6
allele num: 120886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.128C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.713C>A
  hgvsp: ENSP00000439250.1:p.Ser238Ter
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.557C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.690C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.554C>A
  hgvsp: ENSP00000242209.4:p.Ser185Ter
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54242C>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.774C>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.140C>A
  hgvsp: ENSP00000437504.1:p.Ser47Ter
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2407
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40889
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser185Ter
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

7-33014980-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014980
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014980
    reference: chr 7
allele count: 6
allele frequency: 4.963353903677845e-5
allele num: 120886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.140C>T
  hgvsp: ENSP00000437504.1:p.Ser47Leu
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54242C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.713C>T
  hgvsp: ENSP00000439250.1:p.Ser238Leu
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.554C>T
  hgvsp: ENSP00000242209.4:p.Ser185Leu
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.690C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.774C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.557C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.128C>T
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8506
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1408
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4301
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2407
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser185Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum

7-33014981-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014981
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014981
    reference: chr 7
allele count: 90
allele frequency: 7.445769975346229e-4
allele num: 120874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.129G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.714G>A
  hgvsp: ENST00000538336.1:c.714G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.558G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.141G>A
  hgvsp: ENST00000538443.1:c.141G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.775G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.555G>A
  hgvsp: ENST00000242209.4:c.555G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54241G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.691G>A
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 24042
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 4.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8476
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 19994
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1993
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
hgvs: c.555G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

7-33014995-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014995
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014995
    reference: chr 7
allele count: 1
allele frequency: 8.325424180361989e-6
allele num: 120114
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.560+12C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.131+12C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.693+12C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.557+12C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.777+12C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.716+12C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54227C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.143+12C>T
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8399
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6676
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

7-33014996-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33014996
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33014996
    reference: chr 7
allele count: 4
allele frequency: 3.335112059765208e-5
allele num: 119936
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.777+13G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.557+13G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54226G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.131+13G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.693+13G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.716+13G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.560+13G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.143+13G>A
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8242
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23264
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2286
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37957
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2175
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum

7-33015001-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015001
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015001
    reference: chr 7
allele count: 1
allele frequency: 8.354079296920687e-6
allele num: 119702
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.716+18T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54221T>C
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.557+18T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.560+18T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.777+18T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.693+18T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.131+18T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.143+18T>C
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17240
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6347
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37135
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2253
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2715
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ

7-33015013-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015013
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015013
    reference: chr 7
allele count: 2
allele frequency: 1.681096074640666e-5
allele num: 118970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.131+30T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.560+30T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.143+30T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.557+30T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.777+30T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.693+30T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.716+30T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54209T>C
  variant of: http://identifiers.org/hgnc/28994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7883
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6327
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18138
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13649
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1278
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3638
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2061
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

7-33015019-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015019
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015019
    reference: chr 7
allele count: 2
allele frequency: 1.687621297780778e-5
allele num: 118510
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54203G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.716+36G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.557+36G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.560+36G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.693+36G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.131+36G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.143+36G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.777+36G>A
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10955
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11859
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4391
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4247
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD

7-33015020-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015020
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015020
    reference: chr 7
allele count: 1
allele frequency: 8.44095551616443e-6
allele num: 118470
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.131+37T>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.693+37T>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.777+37T>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.560+37T>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.557+37T>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.143+37T>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54202T>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.716+37T>A
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13748
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9486
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12947
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1793
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4804
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1720
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

7-33015021-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015021
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015021
    reference: chr 7
allele count: 202
allele frequency: 1.855185334851769e-3
allele num: 108884
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.716+38C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.693+38C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.557+38C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.131+38C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.560+38C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.143+38C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.777+38C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54201C>T
  variant of: http://identifiers.org/hgnc/28994
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9563
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5807
  bin: 3.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 9302
  bin: 2.25e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 12957
  bin: 2.75e1
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14387
  bin: 1.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 7.5e0
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 15675
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6413
  bin: 3.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 3220
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 1.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 3847
  bin: 2.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 1.25e1
  variant carriers: 71
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

7-33015022-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015022
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015022
    reference: chr 7
allele count: 1
allele frequency: 8.496032352891199e-6
allele num: 117702
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.777+39C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.560+39C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.557+39C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.716+39C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.131+39C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.693+39C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.143+39C>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54200C>G
  variant of: http://identifiers.org/hgnc/28994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9208
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4718
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10769
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14789
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1911
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3861
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5464
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

7-33015026-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015026
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015026
    reference: chr 7
allele count: 1
allele frequency: 8.545401719334827e-6
allele num: 117022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.560+43G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.131+43G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.693+43G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54196G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.716+43G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.557+43G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.143+43G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.777+43G>A
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16909
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4075
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10355
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2745
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3068
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7540
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ

7-33015028-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015028
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015028
    reference: chr 7
allele count: 2
allele frequency: 1.712446057949175e-5
allele num: 116792
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.131+45A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54194A>G
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.557+45A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.716+45A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.777+45A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.143+45A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.560+45A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.693+45A>G
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10675
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16791
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3327
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12315
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1365
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4255
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7383
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

7-33015031-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015031
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015031
    reference: chr 7
allele count: 1
allele frequency: 8.620541025154739e-6
allele num: 116002
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.143+48G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.557+48G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54191G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.777+48G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.693+48G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.131+48G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.560+48G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.716+48G>A
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7773
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3540
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16696
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10572
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5416
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3223
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7740
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7506
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

7-33015032-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015032
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015032
    reference: chr 7
allele count: 2
allele frequency: 1.743800788197956e-5
allele num: 114692
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.143+49T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.131+49T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.716+49T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.557+49T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-54190T>G
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.777+49T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.693+49T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.560+49T>G
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7222
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10458
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3938
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6373
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7596
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

7-33015927-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015927
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015927
    reference: chr 7
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.561-39C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.132-39C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-53295C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.144-39C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.778-39C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.694-39C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.558-39C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.717-39C>T
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2366
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6837
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2029
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

7-33015935-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015935
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015935
    reference: chr 7
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.132-31G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.778-31G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.717-31G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.561-31G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.694-31G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.144-31G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.558-31G>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-53287G>C
  variant of: http://identifiers.org/hgnc/28994
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2365
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2713
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1434
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

7-33015936-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015936
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015936
    reference: chr 7
allele count: 9
allele frequency: 7.415830325802145e-5
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-53286G>A
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.132-30G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.717-30G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.144-30G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.694-30G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.778-30G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.558-30G>A
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.561-30G>A
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6379
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1434
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2711
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP

7-33015937-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015937
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015937
    reference: chr 7
allele count: 4
allele frequency: 3.295815961636702e-5
allele num: 121366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.778-29A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-53285A>G
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.132-29A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.561-29A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.558-29A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.717-29A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.144-29A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.694-29A>G
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4392
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

7-33015939-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015939
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015940
    reference: chr 7
allele count: 3
allele frequency: 2.471902705909495e-5
allele num: 121364
alternate allele: CT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.558-22dupT
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.561-22dupT
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.132-22dupT
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.144-22dupT
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-53278dupT
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.717-22dupT
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.778-22dupT
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.694-22dupT
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6573
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6382
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2708
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1434
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2364
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

7-33015941-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015941
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015941
    reference: chr 7
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.558-25T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-53281T>G
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.144-25T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.561-25T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.132-25T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.694-25T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.717-25T>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.778-25T>G
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6573
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1434
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41843
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

7-33015942-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015942
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015942
    reference: chr 7
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.144-24T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.717-24T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.558-24T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.561-24T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.694-24T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-53280T>C
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.132-24T>C
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.778-24T>C
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6573
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5379
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2710
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

7-33015953-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015953
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015953
    reference: chr 7
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.132-13C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-53269C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.561-13C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.144-13C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.558-13C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.778-13C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.694-13C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.717-13C>T
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6573
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2713
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1434
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1961
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

7-33015954-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015954
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015954
    reference: chr 7
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.558-12A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.717-12A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.144-12A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.561-12A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.132-12A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.694-12A>G
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-53268A>G
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.778-12A>G
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6815
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7089
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

7-33015959-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015959
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015959
    reference: chr 7
allele count: 5
allele frequency: 4.118887570844866e-5
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.694-7C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.561-7C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.132-7C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.558-7C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-53263C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.717-7C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.144-7C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.778-7C>T
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6573
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5445
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6382
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5582
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5382
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2364
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1434
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: c.558-7C>T
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

7-33015963-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 33015963
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 33015963
    reference: chr 7
allele count: 75
allele frequency: 6.18057157925965e-4
allele num: 121348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105778
  ensembl protein: ENSP00000385242
  ensembl transcript: ENST00000404479
  gene symbol: AVL9
  hgvsc: ENST00000404479.1:c.1216-53259C>T
  variant of: http://identifiers.org/hgnc/28994
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000485309
  gene symbol: FKBP9
  hgvsc: ENST00000485309.1:n.778-3C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000242209
  ensembl transcript: ENST00000242209
  gene symbol: FKBP9
  hgvsc: ENST00000242209.4:c.558-3C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000494374
  gene symbol: FKBP9
  hgvsc: ENST00000494374.1:n.694-3C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000472007
  gene symbol: FKBP9
  hgvsc: ENST00000472007.1:n.132-3C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000439250
  ensembl transcript: ENST00000538336
  gene symbol: FKBP9
  hgvsc: ENST00000538336.1:c.717-3C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl transcript: ENST00000469202
  gene symbol: FKBP9
  hgvsc: ENST00000469202.1:n.561-3C>T
  variant of: http://identifiers.org/hgnc/3725
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122642
  ensembl protein: ENSP00000437504
  ensembl transcript: ENST00000538443
  gene symbol: FKBP9
  hgvsc: ENST00000538443.1:c.144-3C>T
  variant of: http://identifiers.org/hgnc/3725
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6572
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6375
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 9.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 7.25e1
  variant carriers: 0
hgvs: c.558-3C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
reference allele: C

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8613
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3649
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8337
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27279
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.925298421255295e-4
allele num: 10388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.997419e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e0

MQRankSum
type: SiteQuality
SIO_000300: 8.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.663e1

VQSLOD
type: SiteQuality
SIO_000300: -1.048e0

QD
type: SiteQuality
SIO_000300: 1.264e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.21e0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3644
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3203
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8503
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1549
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.13195977434388e-5
allele num: 16308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 4.755e0

MQRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.529999999999999e0

DP
type: SiteQuality
SIO_000300: 1.985523e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.938e0

GenotypeQuality
all individuals: 88
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3625
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23060
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4505
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.914885347842985e-4
allele num: 10292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66056
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.082e-1

QD
type: SiteQuality
SIO_000300: 1.377e1

DP
type: SiteQuality
SIO_000300: 1.927892e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.080000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.421e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-2

GenotypeQuality
all individuals: 191
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2440
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8340
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 1544
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3625
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

East Asian
type: Population
allele count: 14
allele frequency: 1.63627863487611e-3
allele num: 8556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513867021920794e-5
allele num: 66056
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15994
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.748251748251748e-4
allele num: 11440
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

QD
type: SiteQuality
SIO_000300: 1.377e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.080000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.421e1

DP
type: SiteQuality
SIO_000300: 1.927892e6

VQSLOD
type: SiteQuality
SIO_000300: -1.082e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-2

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4498
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.88651379712398e-4
allele num: 10292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513408801985592e-5
allele num: 66076
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.248437890527369e-5
allele num: 16004
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.509e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.982e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.83e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.71e-2

QD
type: SiteQuality
SIO_000300: 1.442e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

DP
type: SiteQuality
SIO_000300: 1.926341e6

GenotypeQuality
all individuals: 300
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1543
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8324
bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4498
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3624
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.499375156210947e-4
allele num: 16004
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66076
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.982e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.71e-2

DP
type: SiteQuality
SIO_000300: 1.926341e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.442e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

MQ
type: SiteQuality
SIO_000300: 5.509e1

MQRankSum
type: SiteQuality
SIO_000300: 7.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

GenotypeQuality
all individuals: 519
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4460
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15792
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523136442562525e-5
allele num: 65654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.409e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.665e0

QD
type: SiteQuality
SIO_000300: 1.226e1

VQSLOD
type: SiteQuality
SIO_000300: -1.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQRankSum
type: SiteQuality
SIO_000300: -1.242e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

FS
type: SiteQuality
SIO_000300: 5.221e0

DP
type: SiteQuality
SIO_000300: 1.880338e6

GenotypeQuality
all individuals: 1924
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1535
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4438
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 254
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15706
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.788566953797964e-5
allele num: 10216
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.387e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.49e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.02e-1

FS
type: SiteQuality
SIO_000300: 8.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

QD
type: SiteQuality
SIO_000300: 1.282e1

DP
type: SiteQuality
SIO_000300: 1.872249e6

MQ
type: SiteQuality
SIO_000300: 5.45e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e-2

GenotypeQuality
all individuals: 6108
bin: 6.75e1
variant carriers: 309

GenotypeQuality
all individuals: 446
bin: 4.25e1
variant carriers: 290

GenotypeQuality
all individuals: 895
bin: 2.5e0
variant carriers: 111

GenotypeQuality
all individuals: 1336
bin: 8.75e1
variant carriers: 290

GenotypeQuality
all individuals: 519
bin: 5.25e1
variant carriers: 440

GenotypeQuality
all individuals: 214
bin: 1.25e1
variant carriers: 136

GenotypeQuality
all individuals: 1980
bin: 9.25e1
variant carriers: 291

GenotypeQuality
all individuals: 1135
bin: 2.75e1
variant carriers: 230

GenotypeQuality
all individuals: 2862
bin: 2.25e1
variant carriers: 261

GenotypeQuality
all individuals: 15675
bin: 9.75e1
variant carriers: 9760

Latino
type: Population
allele count: 4121
allele frequency: 3.847087378640777e-1
allele num: 10712
num of homozygotes: 757

European (Non-Finnish)
type: Population
allele count: 9061
allele frequency: 1.410975116011087e-1
allele num: 64218
num of homozygotes: 564

African
type: Population
allele count: 333
allele frequency: 3.291164261711801e-2
allele num: 10118
num of homozygotes: 6

East Asian
type: Population
allele count: 355
allele frequency: 4.184347006129184e-2
allele num: 8484
num of homozygotes: 8

Other
type: Population
allele count: 120
allele frequency: 1.372997711670481e-1
allele num: 874
num of homozygotes: 9

European (Finnish)
type: Population
allele count: 871
allele frequency: 1.346213292117465e-1
allele num: 6470
num of homozygotes: 47

South Asian
type: Population
allele count: 946
allele frequency: 6.123770067322631e-2
allele num: 15448
num of homozygotes: 46

MQRankSum
type: SiteQuality
SIO_000300: -3.84e0

MQ
type: SiteQuality
SIO_000300: 4.809e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.933e0

DP
type: SiteQuality
SIO_000300: 1.858794e6

FS
type: SiteQuality
SIO_000300: 1.1451e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

QD
type: SiteQuality
SIO_000300: 7.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.66e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.296e-1

GenotypeQuality
all individuals: 214
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1508
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 245
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1980
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1336
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1001
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15675
bin: 9.75e1
variant carriers: 27

GenotypeQuality
all individuals: 16555
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.8833761612967e-5
allele num: 10118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 3.737269924320284e-4
allele num: 64218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.800597460791635e-4
allele num: 10712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.545595054095827e-4
allele num: 6470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15448
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1451e1

VQSLOD
type: SiteQuality
SIO_000300: -8.296e-1

MQ
type: SiteQuality
SIO_000300: 4.809e1

QD
type: SiteQuality
SIO_000300: 7.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.933e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.66e-1

DP
type: SiteQuality
SIO_000300: 1.858794e6

GenotypeQuality
all individuals: 2799
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20584
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1800
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variant carriers: 0

GenotypeQuality
all individuals: 1114
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variant carriers: 0

GenotypeQuality
all individuals: 1959
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15416
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.288500835965076e-5
allele num: 10766
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.842e0

VQSLOD
type: SiteQuality
SIO_000300: -1.784e0

MQ
type: SiteQuality
SIO_000300: 5.451e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

DP
type: SiteQuality
SIO_000300: 1.716399e6

MQRankSum
type: SiteQuality
SIO_000300: 2.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.554e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1959
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7137
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variant carriers: 0

GenotypeQuality
all individuals: 1800
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546264225630876e-5
allele num: 64672
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

QD
type: SiteQuality
SIO_000300: 1.554e1

VQSLOD
type: SiteQuality
SIO_000300: -1.784e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

MQ
type: SiteQuality
SIO_000300: 5.451e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.842e0

MQRankSum
type: SiteQuality
SIO_000300: 2.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 1.716399e6

GenotypeQuality
all individuals: 2113
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4403
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variant carriers: 0

GenotypeQuality
all individuals: 4617
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GenotypeQuality
all individuals: 1939
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2170
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GenotypeQuality
all individuals: 3284
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9768
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8292
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.98616738857063e-5
allele num: 14314
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.206e0

DP
type: SiteQuality
SIO_000300: 1.584994e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.5e-1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.263e1

MQ
type: SiteQuality
SIO_000300: 5.1e1

MQRankSum
type: SiteQuality
SIO_000300: -2.17e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.148e0

GenotypeQuality
all individuals: 238
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variant carriers: 0

GenotypeQuality
all individuals: 1130
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GenotypeQuality
all individuals: 399
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GenotypeQuality
all individuals: 1721
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GenotypeQuality
all individuals: 454
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GenotypeQuality
all individuals: 283
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GenotypeQuality
all individuals: 2185
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GenotypeQuality
all individuals: 27716
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GenotypeQuality
all individuals: 5269
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variant carriers: 1

GenotypeQuality
all individuals: 1018
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165501165501166e-4
allele num: 8580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65184
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

DP
type: SiteQuality
SIO_000300: 1.645304e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.219e1

VQSLOD
type: SiteQuality
SIO_000300: -1.489e0

MQ
type: SiteQuality
SIO_000300: 4.672e1

GenotypeQuality
all individuals: 2154
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2534
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6373
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1610
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5265
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 739
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65248
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.061005770816158e-4
allele num: 9704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.511e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.792e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

DP
type: SiteQuality
SIO_000300: 1.659575e6

QD
type: SiteQuality
SIO_000300: 1.476e1

VQSLOD
type: SiteQuality
SIO_000300: -3.433e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

GenotypeQuality
all individuals: 5274
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2244
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2537
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33107
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6473
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1602
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530081400330498e-5
allele num: 65356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e0

QD
type: SiteQuality
SIO_000300: 7.24e0

MQ
type: SiteQuality
SIO_000300: 5.427e1

VQSLOD
type: SiteQuality
SIO_000300: -3.52e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.72e0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

DP
type: SiteQuality
SIO_000300: 1.674034e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.257e0

GenotypeQuality
all individuals: 1613
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2574
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5282
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 140
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1028
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.152052639107424e-5
allele num: 13982
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.212e0

MQRankSum
type: SiteQuality
SIO_000300: 9.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.233e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.092e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.72e-1

QD
type: SiteQuality
SIO_000300: 1.087e1

DP
type: SiteQuality
SIO_000300: 1.690315e6

MQ
type: SiteQuality
SIO_000300: 5.326e1

GenotypeQuality
all individuals: 684
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 936
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6557
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5282
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2570
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524204365321302e-5
allele num: 65608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14140
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.418e0

MQRankSum
type: SiteQuality
SIO_000300: -4.44e-1

DP
type: SiteQuality
SIO_000300: 1.700248e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.191e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.286e0

MQ
type: SiteQuality
SIO_000300: 4.865e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

QD
type: SiteQuality
SIO_000300: 1.146e1

GenotypeQuality
all individuals: 1041
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 355
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 498
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variant carriers: 0

GenotypeQuality
all individuals: 2029
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5295
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 6624
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65804
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9846
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.477857639693948e-4
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.904170118751726e-5
allele num: 14484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.713888e6

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

FS
type: SiteQuality
SIO_000300: 2.253e0

MQRankSum
type: SiteQuality
SIO_000300: -8.91e-1

QD
type: SiteQuality
SIO_000300: 1.212e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.365e0

VQSLOD
type: SiteQuality
SIO_000300: -1.607e0

MQ
type: SiteQuality
SIO_000300: 4.851e1

GenotypeQuality
all individuals: 130
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 36050
bin: 6.25e1
variant carriers: 7

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 785
bin: 9.25e1
variant carriers: 14

GenotypeQuality
all individuals: 2203
bin: 7.75e1
variant carriers: 7

GenotypeQuality
all individuals: 577
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variant carriers: 10

GenotypeQuality
all individuals: 1287
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1828
bin: 7.25e1
variant carriers: 9

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 7

South Asian
type: Population
allele count: 854
allele frequency: 5.806363883600762e-2
allele num: 14708
num of homozygotes: 40

African
type: Population
allele count: 1116
allele frequency: 1.125e-1
allele num: 9920
num of homozygotes: 69

East Asian
type: Population
allele count: 1647
allele frequency: 1.912447747329308e-1
allele num: 8612
num of homozygotes: 147

Other
type: Population
allele count: 23
allele frequency: 2.59009009009009e-2
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 553
allele frequency: 8.402212228029659e-3
allele num: 65816
num of homozygotes: 5

European (Finnish)
type: Population
allele count: 80
allele frequency: 1.214329083181542e-2
allele num: 6588
num of homozygotes: 2

Latino
type: Population
allele count: 346
allele frequency: 3.007126716495741e-2
allele num: 11506
num of homozygotes: 8

FS
type: SiteQuality
SIO_000300: 8.43e-1

DP
type: SiteQuality
SIO_000300: 1.812711e6

MQRankSum
type: SiteQuality
SIO_000300: 1.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.630000000000001e-2

MQ
type: SiteQuality
SIO_000300: 4.987e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.733e0

VQSLOD
type: SiteQuality
SIO_000300: 2.32e0

QD
type: SiteQuality
SIO_000300: 1.442e1

GenotypeQuality
all individuals: 2045
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 1440
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variant carriers: 0

GenotypeQuality
all individuals: 4354
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variant carriers: 3

GenotypeQuality
all individuals: 721
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variant carriers: 0

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 63
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variant carriers: 0

GenotypeQuality
all individuals: 626
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variant carriers: 0

GenotypeQuality
all individuals: 40552
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15924
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.985668789808917e-4
allele num: 10048
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66332
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.587e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

QD
type: SiteQuality
SIO_000300: 1.465e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 9.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.01e-1

MQ
type: SiteQuality
SIO_000300: 4.789e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

DP
type: SiteQuality
SIO_000300: 1.73282e6

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41107
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1447
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variant carriers: 0

GenotypeQuality
all individuals: 625
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variant carriers: 0

GenotypeQuality
all individuals: 52
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variant carriers: 0

GenotypeQuality
all individuals: 66
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variant carriers: 0

GenotypeQuality
all individuals: 305
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variant carriers: 0

GenotypeQuality
all individuals: 854
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variant carriers: 0

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 2471
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502990951994469e-5
allele num: 66534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.777082518576456e-5
allele num: 10228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16320
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.747691e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 4.82e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.03e-1

QD
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeQuality
all individuals: 226
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4349
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variant carriers: 1

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7083
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41317
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 4.417e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

FS
type: SiteQuality
SIO_000300: 5.497e0

DP
type: SiteQuality
SIO_000300: 1.747058e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.653e0

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 8.050000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.183e0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7122
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2473
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 1443
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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QD
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MQRankSum
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DP
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FS
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ReadPosRankSum
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VQSLOD
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MQ
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499790029395885e-5
allele num: 66676
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
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MQRankSum
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ReadPosRankSum
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FS
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MQ
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10390
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FS
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MQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: 2.1e-3

QD
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.88e-1

BaseQRankSum
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MQ
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

South Asian
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allele frequency: 1.211240310077519e-4
allele num: 16512
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
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InbreedingCoeff
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FS
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
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SIO_000300: 1.73e0

MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele num: 16512
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.942e0

MQ
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VQSLOD
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MQRankSum
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InbreedingCoeff
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SIO_000300: 2.2e-3

FS
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ClippingRankSum
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SIO_000300: -2.59e-1

DP
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SIO_000300: 1.753013e6

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.67e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 11
allele frequency: 1.648582219291409e-4
allele num: 66724
num of homozygotes: 0

Latino
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allele frequency: 1.123401313515382e-3
allele num: 11572
num of homozygotes: 0

East Asian
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
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DP
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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QD
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MQ
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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African
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East Asian
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Latino
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South Asian
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European (Non-Finnish)
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MQRankSum
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MQ
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InbreedingCoeff
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FS
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VQSLOD
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QD
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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South Asian
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African
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European (Finnish)
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East Asian
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Other
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DP
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MQ
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MQRankSum
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ClippingRankSum
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VQSLOD
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Other
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African
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European (Non-Finnish)
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Latino
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East Asian
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FS
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MQRankSum
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VQSLOD
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ClippingRankSum
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QD
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BaseQRankSum
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DP
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MQ
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
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allele count: 27
allele frequency: 4.047005216140056e-4
allele num: 66716
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 27
allele frequency: 4.083484573502722e-3
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.058e0

FS
type: SiteQuality
SIO_000300: 5.36e-1

MQ
type: SiteQuality
SIO_000300: 5.677e1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 1.367e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.84e-2

DP
type: SiteQuality
SIO_000300: 1.755411e6

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

MQ
type: SiteQuality
SIO_000300: 5.068e1

DP
type: SiteQuality
SIO_000300: 1.752546e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.313e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.434e0

FS
type: SiteQuality
SIO_000300: 1.328e0

VQSLOD
type: SiteQuality
SIO_000300: -4.434e0

QD
type: SiteQuality
SIO_000300: 1.023e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-2

QD
type: SiteQuality
SIO_000300: 1.272e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

FS
type: SiteQuality
SIO_000300: 1.78e0

MQ
type: SiteQuality
SIO_000300: 5.142e1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

VQSLOD
type: SiteQuality
SIO_000300: -1.463e0

DP
type: SiteQuality
SIO_000300: 1.752303e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.624277456647399e-4
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

QD
type: SiteQuality
SIO_000300: 1.099e1

MQRankSum
type: SiteQuality
SIO_000300: 8.85e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.135e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

MQ
type: SiteQuality
SIO_000300: 5.369e1

FS
type: SiteQuality
SIO_000300: 2.487e0

DP
type: SiteQuality
SIO_000300: 1.752382e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.096e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.24e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 624
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

VQSLOD
type: SiteQuality
SIO_000300: -1.272e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

QD
type: SiteQuality
SIO_000300: 1.073e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

DP
type: SiteQuality
SIO_000300: 1.752209e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

FS
type: SiteQuality
SIO_000300: 9.329000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.117e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998770504093322e-5
allele num: 66694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.172e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.106e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-2

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.4687e1

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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QD
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DP
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 6.064281382656155e-5
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.000750187546887e-5
allele num: 66650
num of homozygotes: 0

East Asian
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allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
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ClippingRankSum
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FS
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.00225056264066e-5
allele num: 66650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 3.418e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.93e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.309e-1

DP
type: SiteQuality
SIO_000300: 1.751145e6

MQ
type: SiteQuality
SIO_000300: 5.091e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.13e-1

QD
type: SiteQuality
SIO_000300: 1.075e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001560811622043e-5
allele num: 66632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.576e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.73e-1

MQ
type: SiteQuality
SIO_000300: 5.128e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e-1

FS
type: SiteQuality
SIO_000300: 8.54e-1

DP
type: SiteQuality
SIO_000300: 1.750183e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.97e-1

QD
type: SiteQuality
SIO_000300: 8.949999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-1

GenotypeQuality
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variant carriers: 13

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.923446816695518e-4
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.501456412720339e-4
allele num: 66602
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.943e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e0

DP
type: SiteQuality
SIO_000300: 1.749765e6

QD
type: SiteQuality
SIO_000300: 9.800000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -7.216e-1

MQ
type: SiteQuality
SIO_000300: 4.973e1

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.17e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1422
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GenotypeQuality
all individuals: 2048
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.003273568189326e-5
allele num: 66594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.068e0

MQ
type: SiteQuality
SIO_000300: 4.935e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 1.975e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.374e0

QD
type: SiteQuality
SIO_000300: 7.93e0

DP
type: SiteQuality
SIO_000300: 1.74922e6

GenotypeQuality
all individuals: 615
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.686587908269631e-5
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66446
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.717e1

QD
type: SiteQuality
SIO_000300: 7.59e0

VQSLOD
type: SiteQuality
SIO_000300: -1.883e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.93e-1

FS
type: SiteQuality
SIO_000300: 2.374e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e0

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 1.742555e6

GenotypeQuality
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 615
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GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.029888932366133e-5
allele num: 66446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.93e-1

MQ
type: SiteQuality
SIO_000300: 4.717e1

DP
type: SiteQuality
SIO_000300: 1.742555e6

VQSLOD
type: SiteQuality
SIO_000300: -1.883e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 7.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e-1

FS
type: SiteQuality
SIO_000300: 2.374e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e0

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 1396
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 83
allele frequency: 1.249172235265788e-3
allele num: 66444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.212858384013901e-4
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.743e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.009e0

FS
type: SiteQuality
SIO_000300: 3.138e0

QD
type: SiteQuality
SIO_000300: 1.099e1

MQ
type: SiteQuality
SIO_000300: 5.029e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.52e-1

DP
type: SiteQuality
SIO_000300: 1.743409e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1926
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514187941007238e-5
allele num: 66042
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -9.643e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.79e-1

DP
type: SiteQuality
SIO_000300: 1.716802e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-1

MQ
type: SiteQuality
SIO_000300: 5.082e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.02e0

QD
type: SiteQuality
SIO_000300: 1.521e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1895
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11386
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.234872808100766e-4
allele num: 16196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516116316443798e-5
allele num: 65958
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.1053e1

MQRankSum
type: SiteQuality
SIO_000300: -2.853e0

MQ
type: SiteQuality
SIO_000300: 4.886e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.379999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.703352e6

QD
type: SiteQuality
SIO_000300: 4.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1127
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GenotypeQuality
all individuals: 203
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 600
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variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.189650903689032e-5
allele num: 16156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.072e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.509e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -9.701e-1

FS
type: SiteQuality
SIO_000300: 1.878e0

MQRankSum
type: SiteQuality
SIO_000300: -3.57e-1

QD
type: SiteQuality
SIO_000300: 1.725e1

DP
type: SiteQuality
SIO_000300: 1.686206e6

MQ
type: SiteQuality
SIO_000300: 5.662e1

GenotypeQuality
all individuals: 582
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16000
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.05548765582987e-5
allele num: 65456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.572546e6

MQ
type: SiteQuality
SIO_000300: 5.84e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.578e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.454e0

QD
type: SiteQuality
SIO_000300: 1.457e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.35e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5774
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.066355942597816e-5
allele num: 65224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.345e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.743e0

DP
type: SiteQuality
SIO_000300: 1.502013e6

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 5.724e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.416e1

GenotypeQuality
all individuals: 6628
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.293266205160478e-5
allele num: 15890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.155e0

MQ
type: SiteQuality
SIO_000300: 5.827e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.32e-1

QD
type: SiteQuality
SIO_000300: 9.26e0

DP
type: SiteQuality
SIO_000300: 1.49117e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.483e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

GenotypeQuality
all individuals: 5115
bin: 3.75e1
variant carriers: 19

GenotypeQuality
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variant carriers: 17

GenotypeQuality
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variant carriers: 61

GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 1083
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variant carriers: 12

GenotypeQuality
all individuals: 978
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variant carriers: 3

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.976775049767751e-4
allele num: 6028
num of homozygotes: 0

Latino
type: Population
allele count: 30
allele frequency: 3.080082135523614e-3
allele num: 9740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 89
allele frequency: 1.459830069218909e-3
allele num: 60966
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.99680170575693e-4
allele num: 15008
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 1.711229946524064e-3
allele num: 9350
num of homozygotes: 0

East Asian
type: Population
allele count: 55
allele frequency: 7.90002872737719e-3
allele num: 6962
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.933e0

MQRankSum
type: SiteQuality
SIO_000300: -2.801e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.48e-2

MQ
type: SiteQuality
SIO_000300: 5.376e1

DP
type: SiteQuality
SIO_000300: 1.4873e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.48e-1

FS
type: SiteQuality
SIO_000300: 6.525e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.401e0

QD
type: SiteQuality
SIO_000300: 1.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.48e-1

GenotypeQuality
all individuals: 4040
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 186
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variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64842
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11096
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.343567622430856e-5
allele num: 15764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.615e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

MQ
type: SiteQuality
SIO_000300: 5.549e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.001e0

VQSLOD
type: SiteQuality
SIO_000300: -2.421e-1

DP
type: SiteQuality
SIO_000300: 1.442334e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8302
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.381620931716656e-5
allele num: 15670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10994
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.406743e6

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.575e0

MQRankSum
type: SiteQuality
SIO_000300: -3.18e-1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

QD
type: SiteQuality
SIO_000300: 8.720000000000001e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.843e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.106361829025845e-5
allele num: 64384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10970
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.97e-1

DP
type: SiteQuality
SIO_000300: 1.393892e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

QD
type: SiteQuality
SIO_000300: 9.48e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63960
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.18105031215571e-5
allele num: 10892
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.447e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-2

DP
type: SiteQuality
SIO_000300: 1.383288e6

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

QD
type: SiteQuality
SIO_000300: 1.394e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.726e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 878
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variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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Latino
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African
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East Asian
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Other
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South Asian
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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DP
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FS
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MQ
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10406
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.499385252046661e-5
allele num: 66694
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DP
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InbreedingCoeff
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QD
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MQ
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MQRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66696
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South Asian
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VQSLOD
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MQRankSum
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ClippingRankSum
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QD
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FS
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DP
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 5.234e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

East Asian
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Other
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Latino
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allele num: 11576
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele num: 10406
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South Asian
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ReadPosRankSum
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QD
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ClippingRankSum
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SIO_000300: 1.26e-1

FS
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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SIO_000300: 5.271e1

DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele num: 16510
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Latino
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European (Non-Finnish)
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allele count: 2
allele frequency: 2.998410842253606e-5
allele num: 66702
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Other
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num of homozygotes: 0

African
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allele num: 10406
num of homozygotes: 0

East Asian
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num of homozygotes: 0

QD
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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MQ
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FS
type: SiteQuality
SIO_000300: 2.827e0

DP
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: 8.999999999999999e-3

MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 2.882952142994427e-4
allele num: 10406
num of homozygotes: 0

South Asian
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Other
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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FS
type: SiteQuality
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ClippingRankSum
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MQ
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ReadPosRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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South Asian
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DP
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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MQ
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VQSLOD
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MQRankSum
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BaseQRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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European (Finnish)
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Other
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European (Non-Finnish)
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allele num: 66706
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African
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South Asian
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MQ
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ClippingRankSum
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QD
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FS
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Latino
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Other
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African
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East Asian
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DP
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QD
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MQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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East Asian
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allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997601918465228e-5
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

DP
type: SiteQuality
SIO_000300: 3.272392e6

MQ
type: SiteQuality
SIO_000300: 4.856e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e0

QD
type: SiteQuality
SIO_000300: 1.18e1

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.993e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

GenotypeQuality
all individuals: 7098
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1960
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41845
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2710
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1233
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.493780162465154e-5
allele num: 66722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.48e-1

MQ
type: SiteQuality
SIO_000300: 4.855e1

VQSLOD
type: SiteQuality
SIO_000300: -1.585e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.353e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

DP
type: SiteQuality
SIO_000300: 3.272633e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: 2.58e-1

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7107
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2032
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2710
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1435
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 41772
bin: 9.75e1
variant carriers: 64

GenotypeQuality
all individuals: 2360
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 71
allele frequency: 1.064467766116942e-3
allele num: 66700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0