1-210796954-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210796954
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210796954
    reference: chr 1
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.919C>T
  hgvsp: ENST00000541565.1:c.919C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1330C>T
  hgvsp: ENST00000391905.3:c.1330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1195C>T
  hgvsp: ENST00000308852.6:c.1195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.400C>T
  hgvsp: ENST00000367009.1:c.400C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1330C>T
  hgvsp: ENST00000261458.3:c.1330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1135C>T
  hgvsp: ENST00000537898.1:c.1135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1330C>T
  hgvsp: ENST00000367010.1:c.1330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1330C>T
  hgvsp: ENST00000413764.2:c.1330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1141C>T
  hgvsp: ENST00000545781.1:c.1141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1333C>T
  hgvsp: ENST00000545154.1:c.1333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46085
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu445Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

1-210796960-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210796960
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210796960
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.406T>C
  hgvsp: ENSP00000355976.1:p.Phe136Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1339T>C
  hgvsp: ENSP00000438468.1:p.Phe447Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1147T>C
  hgvsp: ENSP00000439229.1:p.Phe383Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1336T>C
  hgvsp: ENSP00000416845.2:p.Phe446Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1201T>C
  hgvsp: ENSP00000308628.6:p.Phe401Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1336T>C
  hgvsp: ENSP00000375773.3:p.Phe446Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1336T>C
  hgvsp: ENSP00000355977.1:p.Phe446Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.925T>C
  hgvsp: ENSP00000444995.1:p.Phe309Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1141T>C
  hgvsp: ENSP00000442625.1:p.Phe381Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1336T>C
  hgvsp: ENSP00000261458.3:p.Phe446Leu
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46085
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe447Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum

1-210796962-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210796962
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210796962
    reference: chr 1
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.408T>C
  hgvsp: ENST00000367009.1:c.408T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1338T>C
  hgvsp: ENST00000367010.1:c.1338T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1338T>C
  hgvsp: ENST00000391905.3:c.1338T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1149T>C
  hgvsp: ENST00000545781.1:c.1149T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.927T>C
  hgvsp: ENST00000541565.1:c.927T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1341T>C
  hgvsp: ENST00000545154.1:c.1341T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1143T>C
  hgvsp: ENST00000537898.1:c.1143T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1203T>C
  hgvsp: ENST00000308852.6:c.1203T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1338T>C
  hgvsp: ENST00000261458.3:c.1338T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1338T>C
  hgvsp: ENST00000413764.2:c.1338T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46085
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe447Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

1-210796963-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210796963
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210796964
    reference: chr 1
allele count: 2
allele frequency: 1.647527884409444e-5
allele num: 121394
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1341dupT
  hgvsp: ENSP00000355977.1:p.Gly448TrpfsTer4
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1146dupT
  hgvsp: ENSP00000442625.1:p.Gly383TrpfsTer4
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1341dupT
  hgvsp: ENSP00000375773.3:p.Gly448TrpfsTer4
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1341dupT
  hgvsp: ENSP00000261458.3:p.Gly448TrpfsTer4
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1344dupT
  hgvsp: ENSP00000438468.1:p.Gly449TrpfsTer4
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1152dupT
  hgvsp: ENSP00000439229.1:p.Gly385TrpfsTer4
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.411dupT
  hgvsp: ENSP00000355976.1:p.Gly138TrpfsTer4
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1206dupT
  hgvsp: ENSP00000308628.6:p.Gly403TrpfsTer4
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.930dupT
  hgvsp: ENSP00000444995.1:p.Gly311TrpfsTer4
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1341dupT
  hgvsp: ENSP00000416845.2:p.Gly448TrpfsTer4
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46085
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly449TrpfsTer4
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

1-210796964-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210796964
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210796964
    reference: chr 1
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1205T>C
  hgvsp: ENSP00000308628.6:p.Leu402Pro
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.410T>C
  hgvsp: ENSP00000355976.1:p.Leu137Pro
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1340T>C
  hgvsp: ENSP00000375773.3:p.Leu447Pro
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1340T>C
  hgvsp: ENSP00000416845.2:p.Leu447Pro
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.929T>C
  hgvsp: ENSP00000444995.1:p.Leu310Pro
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1343T>C
  hgvsp: ENSP00000438468.1:p.Leu448Pro
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1340T>C
  hgvsp: ENSP00000261458.3:p.Leu447Pro
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1145T>C
  hgvsp: ENSP00000442625.1:p.Leu382Pro
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1151T>C
  hgvsp: ENSP00000439229.1:p.Leu384Pro
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1340T>C
  hgvsp: ENSP00000355977.1:p.Leu447Pro
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46085
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3107
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu448Pro
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

1-210796967-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210796967
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210796967
    reference: chr 1
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1343G>A
  hgvsp: ENSP00000261458.3:p.Gly448Glu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1343G>A
  hgvsp: ENSP00000375773.3:p.Gly448Glu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1346G>A
  hgvsp: ENSP00000438468.1:p.Gly449Glu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.932G>A
  hgvsp: ENSP00000444995.1:p.Gly311Glu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.413G>A
  hgvsp: ENSP00000355976.1:p.Gly138Glu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1343G>A
  hgvsp: ENSP00000416845.2:p.Gly448Glu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1154G>A
  hgvsp: ENSP00000439229.1:p.Gly385Glu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1343G>A
  hgvsp: ENSP00000355977.1:p.Gly448Glu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1208G>A
  hgvsp: ENSP00000308628.6:p.Gly403Glu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1148G>A
  hgvsp: ENSP00000442625.1:p.Gly383Glu
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46085
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly449Glu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

1-210796970-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210796970
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210796970
    reference: chr 1
allele count: 6
allele frequency: 4.942909396470763e-5
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1349G>A
  hgvsp: ENSP00000438468.1:p.Gly450Asp
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1346G>A
  hgvsp: ENSP00000416845.2:p.Gly449Asp
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1157G>A
  hgvsp: ENSP00000439229.1:p.Gly386Asp
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.935G>A
  hgvsp: ENSP00000444995.1:p.Gly312Asp
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1346G>A
  hgvsp: ENSP00000355977.1:p.Gly449Asp
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1346G>A
  hgvsp: ENSP00000261458.3:p.Gly449Asp
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.416G>A
  hgvsp: ENSP00000355976.1:p.Gly139Asp
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1346G>A
  hgvsp: ENSP00000375773.3:p.Gly449Asp
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1211G>A
  hgvsp: ENSP00000308628.6:p.Gly404Asp
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1151G>A
  hgvsp: ENSP00000442625.1:p.Gly384Asp
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46086
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly450Asp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-210796971-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210796971
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210796971
    reference: chr 1
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1347C>A
  hgvsp: ENST00000261458.3:c.1347C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.936C>A
  hgvsp: ENST00000541565.1:c.936C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.417C>A
  hgvsp: ENST00000367009.1:c.417C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1350C>A
  hgvsp: ENST00000545154.1:c.1350C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1347C>A
  hgvsp: ENST00000391905.3:c.1347C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1212C>A
  hgvsp: ENST00000308852.6:c.1212C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1347C>A
  hgvsp: ENST00000367010.1:c.1347C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1152C>A
  hgvsp: ENST00000537898.1:c.1152C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1347C>A
  hgvsp: ENST00000413764.2:c.1347C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1158C>A
  hgvsp: ENST00000545781.1:c.1158C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46085
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly450Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

1-210796973-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210796973
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210796973
    reference: chr 1
allele count: 31
allele frequency: 2.553920680166746e-4
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.419A>G
  hgvsp: ENSP00000355976.1:p.Asn140Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1154A>G
  hgvsp: ENSP00000442625.1:p.Asn385Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1349A>G
  hgvsp: ENSP00000355977.1:p.Asn450Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1349A>G
  hgvsp: ENSP00000416845.2:p.Asn450Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1349A>G
  hgvsp: ENSP00000261458.3:p.Asn450Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1160A>G
  hgvsp: ENSP00000439229.1:p.Asn387Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1214A>G
  hgvsp: ENSP00000308628.6:p.Asn405Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.938A>G
  hgvsp: ENSP00000444995.1:p.Asn313Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1349A>G
  hgvsp: ENSP00000375773.3:p.Asn450Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1352A>G
  hgvsp: ENSP00000438468.1:p.Asn451Ser
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46087
  bin: 9.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asn451Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

1-210796981-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210796981
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210796981
    reference: chr 1
allele count: 3
allele frequency: 2.472065658063878e-5
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1357G>A
  hgvsp: ENSP00000355977.1:p.Gly453Arg
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1360G>A
  hgvsp: ENSP00000438468.1:p.Gly454Arg
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1357G>A
  hgvsp: ENSP00000375773.3:p.Gly453Arg
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.946G>A
  hgvsp: ENSP00000444995.1:p.Gly316Arg
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.427G>A
  hgvsp: ENSP00000355976.1:p.Gly143Arg
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1168G>A
  hgvsp: ENSP00000439229.1:p.Gly390Arg
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1222G>A
  hgvsp: ENSP00000308628.6:p.Gly408Arg
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1357G>A
  hgvsp: ENSP00000261458.3:p.Gly453Arg
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1162G>A
  hgvsp: ENSP00000442625.1:p.Gly388Arg
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1357G>A
  hgvsp: ENSP00000416845.2:p.Gly453Arg
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46085
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53590
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Gly454Arg
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

1-210796982-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210796982
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210796982
    reference: chr 1
allele count: 11
allele frequency: 9.064838316247487e-5
allele num: 121348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1358G>T
  hgvsp: ENSP00000261458.3:p.Gly453Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1163G>T
  hgvsp: ENSP00000442625.1:p.Gly388Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1361G>T
  hgvsp: ENSP00000438468.1:p.Gly454Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1223G>T
  hgvsp: ENSP00000308628.6:p.Gly408Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1358G>T
  hgvsp: ENSP00000355977.1:p.Gly453Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1169G>T
  hgvsp: ENSP00000439229.1:p.Gly390Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.947G>T
  hgvsp: ENSP00000444995.1:p.Gly316Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1358G>T
  hgvsp: ENSP00000375773.3:p.Gly453Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1358G>T
  hgvsp: ENSP00000416845.2:p.Gly453Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.428G>T
  hgvsp: ENSP00000355976.1:p.Gly143Val
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46086
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly454Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ

1-210796990-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210796990
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210796990
    reference: chr 1
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1366T>C
  hgvsp: ENSP00000355977.1:p.Tyr456His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1171T>C
  hgvsp: ENSP00000442625.1:p.Tyr391His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.436T>C
  hgvsp: ENSP00000355976.1:p.Tyr146His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1366T>C
  hgvsp: ENSP00000375773.3:p.Tyr456His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1231T>C
  hgvsp: ENSP00000308628.6:p.Tyr411His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1177T>C
  hgvsp: ENSP00000439229.1:p.Tyr393His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1366T>C
  hgvsp: ENSP00000261458.3:p.Tyr456His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1369T>C
  hgvsp: ENSP00000438468.1:p.Tyr457His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1366T>C
  hgvsp: ENSP00000416845.2:p.Tyr456His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.955T>C
  hgvsp: ENSP00000444995.1:p.Tyr319His
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46084
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr457His
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

1-210796995-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210796995
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210796995
    reference: chr 1
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1371G>A
  hgvsp: ENSP00000355977.1:p.Trp457Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.441G>A
  hgvsp: ENSP00000355976.1:p.Trp147Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.960G>A
  hgvsp: ENSP00000444995.1:p.Trp320Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1374G>A
  hgvsp: ENSP00000438468.1:p.Trp458Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1371G>A
  hgvsp: ENSP00000416845.2:p.Trp457Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1182G>A
  hgvsp: ENSP00000439229.1:p.Trp394Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1236G>A
  hgvsp: ENSP00000308628.6:p.Trp412Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1371G>A
  hgvsp: ENSP00000261458.3:p.Trp457Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1371G>A
  hgvsp: ENSP00000375773.3:p.Trp457Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1176G>A
  hgvsp: ENSP00000442625.1:p.Trp392Ter
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46083
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Trp458Ter
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

1-210797005-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210797005
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210797005
    reference: chr 1
allele count: 1
allele frequency: 8.25559316436886e-6
allele num: 121130
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1381T>G
  hgvsp: ENSP00000416845.2:p.Phe461Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.451T>G
  hgvsp: ENSP00000355976.1:p.Phe151Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.970T>G
  hgvsp: ENSP00000444995.1:p.Phe324Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1381T>G
  hgvsp: ENSP00000261458.3:p.Phe461Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1192T>G
  hgvsp: ENSP00000439229.1:p.Phe398Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1384T>G
  hgvsp: ENSP00000438468.1:p.Phe462Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1186T>G
  hgvsp: ENSP00000442625.1:p.Phe396Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1381T>G
  hgvsp: ENSP00000355977.1:p.Phe461Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1381T>G
  hgvsp: ENSP00000375773.3:p.Phe461Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1246T>G
  hgvsp: ENSP00000308628.6:p.Phe416Val
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46083
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2471
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Phe462Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-210797007-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210797007
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210797007
    reference: chr 1
allele count: 2
allele frequency: 1.65196418541646e-5
allele num: 121068
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1383C>T
  hgvsp: ENST00000367010.1:c.1383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1248C>T
  hgvsp: ENST00000308852.6:c.1248C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1383C>T
  hgvsp: ENST00000261458.3:c.1383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1386C>T
  hgvsp: ENST00000545154.1:c.1386C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.972C>T
  hgvsp: ENST00000541565.1:c.972C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1383C>T
  hgvsp: ENST00000413764.2:c.1383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.453C>T
  hgvsp: ENST00000367009.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1383C>T
  hgvsp: ENST00000391905.3:c.1383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1188C>T
  hgvsp: ENST00000537898.1:c.1188C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1194C>T
  hgvsp: ENST00000545781.1:c.1194C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46083
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4500
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Phe462Phe
num of homozygotes: 1
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

1-210797008-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210797008
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210797008
    reference: chr 1
allele count: 1
allele frequency: 8.262141216517673e-6
allele num: 121034
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1189A>G
  hgvsp: ENSP00000442625.1:p.Ile397Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1384A>G
  hgvsp: ENSP00000261458.3:p.Ile462Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1384A>G
  hgvsp: ENSP00000355977.1:p.Ile462Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.454A>G
  hgvsp: ENSP00000355976.1:p.Ile152Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.973A>G
  hgvsp: ENSP00000444995.1:p.Ile325Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1384A>G
  hgvsp: ENSP00000375773.3:p.Ile462Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1249A>G
  hgvsp: ENSP00000308628.6:p.Ile417Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1387A>G
  hgvsp: ENSP00000438468.1:p.Ile463Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1384A>G
  hgvsp: ENSP00000416845.2:p.Ile462Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1195A>G
  hgvsp: ENSP00000439229.1:p.Ile399Val
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46083
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ile463Val
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/1-210797013-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210797013
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210797013
    reference: chr 1
allele count: 1
allele frequency: 8.272256506129742e-6
allele num: 120886
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.459A>C
  hgvsp: ENSP00000355976.1:p.Gln153His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.978A>C
  hgvsp: ENSP00000444995.1:p.Gln326His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1389A>C
  hgvsp: ENSP00000416845.2:p.Gln463His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1389A>C
  hgvsp: ENSP00000261458.3:p.Gln463His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1200A>C
  hgvsp: ENSP00000439229.1:p.Gln400His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1389A>C
  hgvsp: ENSP00000355977.1:p.Gln463His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1254A>C
  hgvsp: ENSP00000308628.6:p.Gln418His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1392A>C
  hgvsp: ENSP00000438468.1:p.Gln464His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1389A>C
  hgvsp: ENSP00000375773.3:p.Gln463His
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1194A>C
  hgvsp: ENSP00000442625.1:p.Gln398His
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46083
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln464His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

1-210797014-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210797014
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210797014
    reference: chr 1
allele count: 3
allele frequency: 2.482046530098951e-5
allele num: 120868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255G>A
  hgvsp: ENSP00000308628.6:p.Gly419Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390G>A
  hgvsp: ENSP00000416845.2:p.Gly464Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393G>A
  hgvsp: ENSP00000438468.1:p.Gly465Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195G>A
  hgvsp: ENSP00000442625.1:p.Gly399Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390G>A
  hgvsp: ENSP00000261458.3:p.Gly464Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1390G>A
  hgvsp: ENSP00000375773.3:p.Gly464Arg
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390G>A
  hgvsp: ENSP00000355977.1:p.Gly464Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201G>A
  hgvsp: ENSP00000439229.1:p.Gly401Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979G>A
  hgvsp: ENSP00000444995.1:p.Gly327Ser
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460G>A
  hgvsp: ENSP00000355976.1:p.Gly154Ser
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46083
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly465Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

1-210797031-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210797031
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210797031
    reference: chr 1
allele count: 1
allele frequency: 8.300683976359652e-6
allele num: 120472
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+17T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+17T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+17T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+17T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+17T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1390+17T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+17T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+17T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+17T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+17T>G
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46083
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

1-210797045-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210797045
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210797045
    reference: chr 1
allele count: 1
allele frequency: 8.321129010784183e-6
allele num: 120176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+31A>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+31A>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+31A>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1390+31A>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+31A>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+31A>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+31A>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+31A>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+31A>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+31A>T
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46083
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1695
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53586
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

1-210797057-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210797057
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210797057
    reference: chr 1
allele count: 2
allele frequency: 1.6703135178473e-5
allele num: 119738
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1390+43T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+43T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+43T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+43T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+43T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+43T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+43T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+43T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+43T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+43T>C
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46083
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-210797061-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210797061
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210797061
    reference: chr 1
allele count: 1
allele frequency: 8.394614015647561e-6
allele num: 119124
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+47T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+47T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+47T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+47T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+47T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1390+47T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+47T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+47T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+47T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+47T>G
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46083
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS

1-210797062-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210797062
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210797062
    reference: chr 1
allele count: 1
allele frequency: 8.396446623788812e-6
allele num: 119098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+48G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+48G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+48G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+48G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1390+48G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+48G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+48G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+48G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+48G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+48G>A
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46083
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

1-210797062-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210797062
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210797062
    reference: chr 1
allele count: 2
allele frequency: 1.679289324757762e-5
allele num: 119098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+48G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+48G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+48G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+48G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1390+48G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+48G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+48G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+48G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+48G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+48G>T
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46083
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

1-210804319-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210804319
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210804319
    reference: chr 1
allele count: 1275
allele frequency: 1.201243640474845e-1
allele num: 10614
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+7305T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+7305T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+7305T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+7305T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+7305T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+7305T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+7305T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+7305T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+7305T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1391-22T>C
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.75e1
  variant carriers: 268
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 7.5e0
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 2.75e1
  variant carriers: 283
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 3.25e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.25e1
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 2.5e0
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 3.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 2.25e1
  variant carriers: 329
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 6.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 9.25e1
  variant carriers: 13
num of homozygotes: 84
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-210804348-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210804348
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210804348
    reference: chr 1
allele count: 1
allele frequency: 8.289124668435013e-5
allele num: 12064
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+7334A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1398A>G
  hgvsp: ENST00000391905.3:c.1398A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+7334A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+7334A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+7334A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+7334A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+7334A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+7334A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+7334A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+7334A>G
  variant of: http://identifiers.org/hgnc/18270
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu466Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-210804353-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210804353
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210804352
    reference: chr 1
allele count: 5
allele frequency: 4.112518506333278e-4
allele num: 12158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+7340delA
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+7340delA
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1404delA
  hgvsp: ENSP00000375773.3:p.Leu468PhefsTer42
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+7340delA
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+7340delA
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+7340delA
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+7340delA
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+7340delA
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+7340delA
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+7340delA
  variant of: http://identifiers.org/hgnc/18270
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu468PhefsTer42
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: TA
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

1-210804354-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210804354
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210804355
    reference: chr 1
allele count: 2
allele frequency: 1.655355073663301e-4
allele num: 12082
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+7348dupT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+7348dupT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+7348dupT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+7348dupT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+7348dupT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+7348dupT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1412dupT
  hgvsp: ENSP00000375773.3:p.Leu471PhefsTer?
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+7348dupT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+7348dupT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+7348dupT
  variant of: http://identifiers.org/hgnc/18270
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu471PhefsTer?
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ

1-210804355-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210804355
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210804355
    reference: chr 1
allele count: 1
allele frequency: 8.264462809917356e-5
allele num: 12100
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+7341T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+7341T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+7341T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+7341T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1405T>G
  hgvsp: ENSP00000375773.3:p.Phe469Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+7341T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+7341T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+7341T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+7341T>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+7341T>G
  variant of: http://identifiers.org/hgnc/18270
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe469Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ

1-210804405-GTT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210804405
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210804403
    reference: chr 1
allele count: 1
allele frequency: 7.522190461862494e-5
allele num: 13294
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+7393_1201+7394delTT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+7393_979+7394delTT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1457_1458delTT
  hgvsp: ENSP00000375773.3:p.Phe486SerfsTer?
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+7393_1390+7394delTT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+7393_1390+7394delTT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+7393_1195+7394delTT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+7393_1393+7394delTT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+7393_460+7394delTT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+7393_1390+7394delTT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+7393_1255+7394delTT
  variant of: http://identifiers.org/hgnc/18270
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe486SerfsTer?
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
reference allele: GTT
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

1-210804408-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210804408
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210804408
    reference: chr 1
allele count: 2
allele frequency: 1.497902935889754e-4
allele num: 13352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+7394T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+7394T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+7394T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1458T>A
  hgvsp: ENSP00000375773.3:p.Phe486Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+7394T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+7394T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+7394T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+7394T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+7394T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+7394T>A
  variant of: http://identifiers.org/hgnc/18270
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Phe486Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

1-210804430-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210804430
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210804430
    reference: chr 1
allele count: 2455
allele frequency: 1.752069654581787e-1
allele num: 14012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+7416G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+7416G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+7416G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1480G>A
  hgvsp: ENSP00000375773.3:p.Val494Ile
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+7416G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+7416G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+7416G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+7416G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+7416G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+7416G>A
  variant of: http://identifiers.org/hgnc/18270
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 2.75e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 2.5e0
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 9.75e1
  variant carriers: 461
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.75e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 3.25e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 2.25e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 160
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 164
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.75e1
  variant carriers: 164
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 3.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 138
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 156
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 145
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 9
hgvs: p.Val494Ile
num of homozygotes: 209
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-210804440-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210804440
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210804440
    reference: chr 1
allele count: 18
allele frequency: 1.284796573875803e-3
allele num: 14010
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+7426C>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+7426C>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1490C>A
  hgvsp: ENSP00000375773.3:p.Thr497Asn
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+7426C>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+7426C>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+7426C>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+7426C>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+7426C>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+7426C>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+7426C>A
  variant of: http://identifiers.org/hgnc/18270
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr497Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

1-210804455-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210804455
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210804454
    reference: chr 1
allele count: 1
allele frequency: 7.059155724975294e-5
allele num: 14166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1510delT
  hgvsp: ENSP00000375773.3:p.Ser504ProfsTer6
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+7446delT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+7446delT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+7446delT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+7446delT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+7446delT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+7446delT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+7446delT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+7446delT
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+7446delT
  variant of: http://identifiers.org/hgnc/18270
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser504ProfsTer6
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: AT
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum

1-210804475-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210804475
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210804475
    reference: chr 1
allele count: 3
allele frequency: 2.130379207498935e-4
allele num: 14082
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+7461A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+7461A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+7461A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+7461A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+7461A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+7461A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+7461A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+7461A>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1525A>G
  hgvsp: ENSP00000375773.3:p.Ile509Val
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+7461A>G
  variant of: http://identifiers.org/hgnc/18270
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile509Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum

1-210804485-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210804485
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210804485
    reference: chr 1
allele count: 1
allele frequency: 7.216048491845865e-5
allele num: 13858
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+7471C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+7471C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+7471C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+7471C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+7471C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+7471C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+7471C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+7471C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+7471C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1535C>T
  hgvsp: ENSP00000375773.3:p.Thr512Ile
  variant of: http://identifiers.org/hgnc/18270
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr512Ile
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

1-210804490-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210804490
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210804490
    reference: chr 1
allele count: 2
allele frequency: 1.462202076326948e-4
allele num: 13678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1255+7476G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1201+7476G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1390+7476G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1390+7476G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.979+7476G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.460+7476G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000375773
  ensembl transcript: ENST00000391905
  gene symbol: HHAT
  hgvsc: ENST00000391905.3:c.1540G>A
  hgvsp: ENSP00000375773.3:p.Glu514Lys
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1393+7476G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1195+7476G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1390+7476G>A
  variant of: http://identifiers.org/hgnc/18270
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3381
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4755
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu514Lys
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

1-210847580-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847580
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847580
    reference: chr 1
allele count: 2
allele frequency: 1.652127940787734e-5
allele num: 121056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1391-50C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1391-50C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1196-50C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.980-50C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1391-50C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1256-50C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1202-50C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.461-50C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1394-50C>T
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4475
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2295
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32258
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8998
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3422
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

1-210847584-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847584
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847584
    reference: chr 1
allele count: 2
allele frequency: 1.651145895251304e-5
allele num: 121128
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1391-46C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1391-46C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.461-46C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1256-46C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1394-46C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1202-46C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1196-46C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1391-46C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.980-46C>T
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4446
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8227
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

1-210847585-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847585
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847585
    reference: chr 1
allele count: 1
allele frequency: 8.253412786187088e-6
allele num: 121162
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1394-45C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1391-45C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1202-45C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.980-45C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.461-45C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1391-45C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1391-45C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1196-45C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1256-45C>T
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9006
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

1-210847589-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847589
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847589
    reference: chr 1
allele count: 2
allele frequency: 1.650491846570278e-5
allele num: 121176
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.980-41G>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1196-41G>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.461-41G>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1256-41G>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1391-41G>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1202-41G>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1391-41G>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1394-41G>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1391-41G>C
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26112
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13634
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3328
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

1-210847593-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847593
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847593
    reference: chr 1
allele count: 2
allele frequency: 1.650056101907465e-5
allele num: 121208
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.461-37T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1202-37T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.980-37T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1391-37T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1256-37T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1196-37T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1394-37T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1391-37T>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1391-37T>A
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4430
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34009
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

1-210847599-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847599
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847599
    reference: chr 1
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1391-31C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.980-31C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1196-31C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1391-31C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1256-31C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1391-31C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.461-31C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1394-31C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1202-31C>G
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34327
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2230
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2856
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

1-210847612-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847612
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847612
    reference: chr 1
allele count: 1
allele frequency: 8.241984669908513e-6
allele num: 121330
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1394-18T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1256-18T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1196-18T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1391-18T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1202-18T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1391-18T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.980-18T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1391-18T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.461-18T>C
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3309
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9094
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2866
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-210847612-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847612
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847611
    reference: chr 1
allele count: 4
allele frequency: 3.296793867963405e-5
allele num: 121330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1391-17delC
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.980-17delC
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1394-17delC
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.461-17delC
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1256-17delC
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1391-17delC
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1202-17delC
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1391-17delC
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1196-17delC
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9094
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: TC
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

1-210847613-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847613
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847613
    reference: chr 1
allele count: 2
allele frequency: 1.648505629646725e-5
allele num: 121322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1202-17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.461-17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1391-17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1196-17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.980-17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1256-17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1394-17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1391-17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1391-17C>G
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5852
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP

1-210847618-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847618
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847618
    reference: chr 1
allele count: 49
allele frequency: 4.038239657161695e-4
allele num: 121340
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1394-12C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1202-12C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1391-12C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.980-12C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1256-12C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.461-12C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1391-12C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1391-12C>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1196-12C>T
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 26608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9094
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

1-210847625-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847625
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847625
    reference: chr 1
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.461-5T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.980-5T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1202-5T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1256-5T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1391-5T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1394-5T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1196-5T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1391-5T>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1391-5T>C
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8724
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2222
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1394-5T>C
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

1-210847640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847640
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847640
    reference: chr 1
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1401G>A
  hgvsp: ENSP00000261458.3:p.Trp467Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1266G>A
  hgvsp: ENSP00000308628.6:p.Trp422Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1212G>A
  hgvsp: ENSP00000439229.1:p.Trp404Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1401G>A
  hgvsp: ENSP00000355977.1:p.Trp467Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.471G>A
  hgvsp: ENSP00000355976.1:p.Trp157Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1404G>A
  hgvsp: ENSP00000438468.1:p.Trp468Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1206G>A
  hgvsp: ENSP00000442625.1:p.Trp402Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1401G>A
  hgvsp: ENSP00000416845.2:p.Trp467Ter
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.990G>A
  hgvsp: ENSP00000444995.1:p.Trp330Ter
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26708
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13729
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1359
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9122
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Trp468Ter
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

1-210847652-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847652
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847652
    reference: chr 1
allele count: 6
allele frequency: 4.943153732081068e-5
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1413T>C
  hgvsp: ENST00000367010.1:c.1413T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1218T>C
  hgvsp: ENST00000537898.1:c.1218T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1278T>C
  hgvsp: ENST00000308852.6:c.1278T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1413T>C
  hgvsp: ENST00000261458.3:c.1413T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1224T>C
  hgvsp: ENST00000545781.1:c.1224T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1413T>C
  hgvsp: ENST00000413764.2:c.1413T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1416T>C
  hgvsp: ENST00000545154.1:c.1416T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.1002T>C
  hgvsp: ENST00000541565.1:c.1002T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.483T>C
  hgvsp: ENST00000367009.1:c.483T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8726
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser472Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-210847658-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847658
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847658
    reference: chr 1
allele count: 10
allele frequency: 8.2387253044209e-5
allele num: 121378
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.489G>C
  hgvsp: ENST00000367009.1:c.489G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1422G>C
  hgvsp: ENST00000545154.1:c.1422G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.1008G>C
  hgvsp: ENST00000541565.1:c.1008G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1419G>C
  hgvsp: ENST00000413764.2:c.1419G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1419G>C
  hgvsp: ENST00000261458.3:c.1419G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1284G>C
  hgvsp: ENST00000308852.6:c.1284G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1224G>C
  hgvsp: ENST00000537898.1:c.1224G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1230G>C
  hgvsp: ENST00000545781.1:c.1230G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1419G>C
  hgvsp: ENST00000367010.1:c.1419G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13728
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu474Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ

1-210847678-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847678
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847678
    reference: chr 1
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1439C>T
  hgvsp: ENSP00000416845.2:p.Ser480Phe
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1304C>T
  hgvsp: ENSP00000308628.6:p.Ser435Phe
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.1028C>T
  hgvsp: ENSP00000444995.1:p.Ser343Phe
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1244C>T
  hgvsp: ENSP00000442625.1:p.Ser415Phe
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1439C>T
  hgvsp: ENSP00000355977.1:p.Ser480Phe
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1442C>T
  hgvsp: ENSP00000438468.1:p.Ser481Phe
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.509C>T
  hgvsp: ENSP00000355976.1:p.Ser170Phe
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1250C>T
  hgvsp: ENSP00000439229.1:p.Ser417Phe
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1439C>T
  hgvsp: ENSP00000261458.3:p.Ser480Phe
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26740
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13719
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2860
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser481Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-210847682-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847682
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847682
    reference: chr 1
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.1032C>T
  hgvsp: ENST00000541565.1:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1446C>T
  hgvsp: ENST00000545154.1:c.1446C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1443C>T
  hgvsp: ENST00000261458.3:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1308C>T
  hgvsp: ENST00000308852.6:c.1308C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1443C>T
  hgvsp: ENST00000367010.1:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1248C>T
  hgvsp: ENST00000537898.1:c.1248C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.513C>T
  hgvsp: ENST00000367009.1:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1443C>T
  hgvsp: ENST00000413764.2:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1254C>T
  hgvsp: ENST00000545781.1:c.1254C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13723
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34950
  bin: 6.25e1
  variant carriers: 0
hgvs: p.His482His
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

1-210847683-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847683
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847683
    reference: chr 1
allele count: 12
allele frequency: 9.889240506329114e-5
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1255G>A
  hgvsp: ENSP00000439229.1:p.Val419Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.514G>A
  hgvsp: ENSP00000355976.1:p.Val172Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1309G>A
  hgvsp: ENSP00000308628.6:p.Val437Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1249G>A
  hgvsp: ENSP00000442625.1:p.Val417Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1444G>A
  hgvsp: ENSP00000416845.2:p.Val482Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1444G>A
  hgvsp: ENSP00000355977.1:p.Val482Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1444G>A
  hgvsp: ENSP00000261458.3:p.Val482Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.1033G>A
  hgvsp: ENSP00000444995.1:p.Val345Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1447G>A
  hgvsp: ENSP00000438468.1:p.Val483Met
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13718
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26735
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34951
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val483Met
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

1-210847690-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847690
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847690
    reference: chr 1
allele count: 2
allele frequency: 1.648451280022419e-5
allele num: 121326
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1451T>C
  hgvsp: ENSP00000416845.2:p.Ile484Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.1040T>C
  hgvsp: ENSP00000444995.1:p.Ile347Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1262T>C
  hgvsp: ENSP00000439229.1:p.Ile421Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.521T>C
  hgvsp: ENSP00000355976.1:p.Ile174Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1451T>C
  hgvsp: ENSP00000355977.1:p.Ile484Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1451T>C
  hgvsp: ENSP00000261458.3:p.Ile484Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1256T>C
  hgvsp: ENSP00000442625.1:p.Ile419Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1454T>C
  hgvsp: ENSP00000438468.1:p.Ile485Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1316T>C
  hgvsp: ENSP00000308628.6:p.Ile439Thr
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34934
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile485Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

1-210847696-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847696
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847696
    reference: chr 1
allele count: 78
allele frequency: 6.430762127757807e-4
allele num: 121292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.1046G>T
  hgvsp: ENSP00000444995.1:p.Trp349Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1457G>T
  hgvsp: ENSP00000416845.2:p.Trp486Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1457G>T
  hgvsp: ENSP00000355977.1:p.Trp486Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1457G>T
  hgvsp: ENSP00000261458.3:p.Trp486Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1322G>T
  hgvsp: ENSP00000308628.6:p.Trp441Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.527G>T
  hgvsp: ENSP00000355976.1:p.Trp176Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1262G>T
  hgvsp: ENSP00000442625.1:p.Trp421Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1460G>T
  hgvsp: ENSP00000438468.1:p.Trp487Leu
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1268G>T
  hgvsp: ENSP00000439229.1:p.Trp423Leu
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 13692
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 6.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34866
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Trp487Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-210847701-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847701
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847700
    reference: chr 1
allele count: 5
allele frequency: 4.124663839897049e-5
allele num: 121222
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1328delA
  hgvsp: ENSP00000308628.6:p.Gln443ArgfsTer?
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1268delA
  hgvsp: ENSP00000442625.1:p.Gln423ArgfsTer23
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1466delA
  hgvsp: ENSP00000438468.1:p.Gln489ArgfsTer23
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1274delA
  hgvsp: ENSP00000439229.1:p.Gln425ArgfsTer23
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1463delA
  hgvsp: ENSP00000416845.2:p.Gln488ArgfsTer23
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1463delA
  hgvsp: ENSP00000261458.3:p.Gln488ArgfsTer23
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.1052delA
  hgvsp: ENSP00000444995.1:p.Gln351ArgfsTer23
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.533delA
  hgvsp: ENSP00000355976.1:p.Gln178ArgfsTer23
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1463delA
  hgvsp: ENSP00000355977.1:p.Gln488ArgfsTer23
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8557
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9075
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln489ArgfsTer23
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: CA
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

1-210847705-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847705
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847705
    reference: chr 1
allele count: 2
allele frequency: 1.650083329208125e-5
allele num: 121206
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1466C>T
  hgvsp: ENSP00000355977.1:p.Thr489Ile
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1466C>T
  hgvsp: ENSP00000261458.3:p.Thr489Ile
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.536C>T
  hgvsp: ENSP00000355976.1:p.Thr179Ile
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1271C>T
  hgvsp: ENSP00000442625.1:p.Thr424Ile
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1277C>T
  hgvsp: ENSP00000439229.1:p.Thr426Ile
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1331C>T
  hgvsp: ENSP00000308628.6:p.Thr444Ile
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1469C>T
  hgvsp: ENSP00000438468.1:p.Thr490Ile
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1466C>T
  hgvsp: ENSP00000416845.2:p.Thr489Ile
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.1055C>T
  hgvsp: ENSP00000444995.1:p.Thr352Ile
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8524
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3284
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr490Ile
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

1-210847709-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847709
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847709
    reference: chr 1
allele count: 23
allele frequency: 1.898566994650994e-4
allele num: 121144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1335C>T
  hgvsp: ENST00000308852.6:c.1335C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.540C>T
  hgvsp: ENST00000367009.1:c.540C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1470C>T
  hgvsp: ENST00000413764.2:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1275C>T
  hgvsp: ENST00000537898.1:c.1275C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1473C>T
  hgvsp: ENST00000545154.1:c.1473C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1470C>T
  hgvsp: ENST00000261458.3:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1470C>T
  hgvsp: ENST00000367010.1:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1281C>T
  hgvsp: ENST00000545781.1:c.1281C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.1059C>T
  hgvsp: ENST00000541565.1:c.1059C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4395
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13624
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2201
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr491Tyr
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum

1-210847710-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847710
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847710
    reference: chr 1
allele count: 6
allele frequency: 4.953437685753913e-5
allele num: 121128
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1336G>A
  hgvsp: ENSP00000308628.6:p.Ala446Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1276G>A
  hgvsp: ENSP00000442625.1:p.Ala426Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1471G>A
  hgvsp: ENSP00000355977.1:p.Ala491Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.541G>A
  hgvsp: ENSP00000355976.1:p.Ala181Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1282G>A
  hgvsp: ENSP00000439229.1:p.Ala428Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.1060G>A
  hgvsp: ENSP00000444995.1:p.Ala354Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1471G>A
  hgvsp: ENSP00000261458.3:p.Ala491Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1474G>A
  hgvsp: ENSP00000438468.1:p.Ala492Thr
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1471G>A
  hgvsp: ENSP00000416845.2:p.Ala491Thr
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9008
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34574
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5709
  bin: 9.75e1
  variant carriers: 6
hgvs: p.Ala492Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum

1-210847714-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847714
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847714
    reference: chr 1
allele count: 10
allele frequency: 8.260093834665961e-5
allele num: 121064
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1280C>T
  hgvsp: ENSP00000442625.1:p.Thr427Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1475C>T
  hgvsp: ENSP00000416845.2:p.Thr492Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.1064C>T
  hgvsp: ENSP00000444995.1:p.Thr355Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1478C>T
  hgvsp: ENSP00000438468.1:p.Thr493Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1286C>T
  hgvsp: ENSP00000439229.1:p.Thr429Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1475C>T
  hgvsp: ENSP00000355977.1:p.Thr492Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1475C>T
  hgvsp: ENSP00000261458.3:p.Thr492Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1340C>T
  hgvsp: ENSP00000308628.6:p.Thr447Met
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.545C>T
  hgvsp: ENSP00000355976.1:p.Thr182Met
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34398
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr493Met
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

1-210847716-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847716
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847716
    reference: chr 1
allele count: 1
allele frequency: 8.263233568560049e-6
allele num: 121018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1477G>A
  hgvsp: ENSP00000261458.3:p.Asp493Asn
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1477G>A
  hgvsp: ENSP00000416845.2:p.Asp493Asn
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1288G>A
  hgvsp: ENSP00000439229.1:p.Asp430Asn
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1477G>A
  hgvsp: ENSP00000355977.1:p.Asp493Asn
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1480G>A
  hgvsp: ENSP00000438468.1:p.Asp494Asn
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.547G>A
  hgvsp: ENSP00000355976.1:p.Asp183Asn
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1282G>A
  hgvsp: ENSP00000442625.1:p.Asp428Asn
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1342G>A
  hgvsp: ENSP00000308628.6:p.Asp448Asn
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.1066G>A
  hgvsp: ENSP00000444995.1:p.Asp356Asn
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34346
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp494Asn
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

1-210847721-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847721
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847721
    reference: chr 1
allele count: 1
allele frequency: 8.272940865018697e-6
allele num: 120876
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.1482A>G
  hgvsp: ENST00000261458.3:c.1482A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.1071A>G
  hgvsp: ENST00000541565.1:c.1071A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.1482A>G
  hgvsp: ENST00000367010.1:c.1482A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.1347A>G
  hgvsp: ENST00000308852.6:c.1347A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.552A>G
  hgvsp: ENST00000367009.1:c.552A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.1482A>G
  hgvsp: ENST00000413764.2:c.1482A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.1287A>G
  hgvsp: ENST00000537898.1:c.1287A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.1293A>G
  hgvsp: ENST00000545781.1:c.1293A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: stop_retained_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.1485A>G
  hgvsp: ENST00000545154.1:c.1485A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: stop retained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4323
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5688
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ter495Ter
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

1-210847726-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847726
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847726
    reference: chr 1
allele count: 1
allele frequency: 8.295588406085643e-6
allele num: 120546
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.*5G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.*5G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.*5G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.*5G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.*5G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.*5G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.*5G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.*5G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.*5G>T
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8657
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5673
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

1-210847730-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847730
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847730
    reference: chr 1
allele count: 1
allele frequency: 8.306475728477921e-6
allele num: 120388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.*9G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.*9G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.*9G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.*9G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.*9G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.*9G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.*9G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.*9G>A
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.*9G>A
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8550
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4147
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8550
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1287
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD

1-210847734-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847734
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847734
    reference: chr 1
allele count: 1
allele frequency: 8.327504080476999e-6
allele num: 120084
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.*13C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.*13C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.*13C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.*13C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.*13C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.*13C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.*13C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.*13C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.*13C>G
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8262
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5649
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1730
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

1-210847738-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847738
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847738
    reference: chr 1
allele count: 1
allele frequency: 8.342231713828083e-6
allele num: 119872
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.*17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.*17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.*17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.*17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.*17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.*17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.*17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.*17C>G
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.*17C>G
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11940
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3055
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2225
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5650
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-210847740-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847740
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847740
    reference: chr 1
allele count: 10198
allele frequency: 8.530750184032658e-2
allele num: 119544
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.*19A>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.*19A>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.*19A>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.*19A>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.*19A>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.*19A>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.*19A>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.*19A>C
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.*19A>C
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.75e1
  variant carriers: 142
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.25e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 1.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 1.75e1
  variant carriers: 219
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 3.75e1
  variant carriers: 1491
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 318
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 6.25e1
  variant carriers: 190
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 5.25e1
  variant carriers: 557
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 4.25e1
  variant carriers: 1179
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 8646
  bin: 2.25e1
  variant carriers: 616
genotype depth: GenotypeDepth
  all individuals: 24428
  bin: 2.75e1
  variant carriers: 1080
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.75e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 11623
  bin: 3.25e1
  variant carriers: 1526
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.75e1
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 4.75e1
  variant carriers: 816
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 8.25e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 5.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 3.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 8.75e1
  variant carriers: 51
num of homozygotes: 1553
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

1-210847741-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 210847741
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 210847741
    reference: chr 1
allele count: 3
allele frequency: 2.512394479431864e-5
allele num: 119408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355976
  ensembl transcript: ENST00000367009
  gene symbol: HHAT
  hgvsc: ENST00000367009.1:c.*20G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000355977
  ensembl transcript: ENST00000367010
  gene symbol: HHAT
  hgvsc: ENST00000367010.1:c.*20G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000261458
  ensembl transcript: ENST00000261458
  gene symbol: HHAT
  hgvsc: ENST00000261458.3:c.*20G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000416845
  ensembl transcript: ENST00000413764
  gene symbol: HHAT
  hgvsc: ENST00000413764.2:c.*20G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000438468
  ensembl transcript: ENST00000545154
  gene symbol: HHAT
  hgvsc: ENST00000545154.1:c.*20G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000308628
  ensembl transcript: ENST00000308852
  gene symbol: HHAT
  hgvsc: ENST00000308852.6:c.*20G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000444995
  ensembl transcript: ENST00000541565
  gene symbol: HHAT
  hgvsc: ENST00000541565.1:c.*20G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000439229
  ensembl transcript: ENST00000545781
  gene symbol: HHAT
  hgvsc: ENST00000545781.1:c.*20G>T
  variant of: http://identifiers.org/hgnc/18270
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000054392
  ensembl protein: ENSP00000442625
  ensembl transcript: ENST00000537898
  gene symbol: HHAT
  hgvsc: ENST00000537898.1:c.*20G>T
  variant of: http://identifiers.org/hgnc/18270
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11561
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34554
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53590
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 329
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5013
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.22e-1

DP
type: SiteQuality
SIO_000300: 7.291126e6

VQSLOD
type: SiteQuality
SIO_000300: 9.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.13e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 1.285e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.469e0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53590
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5008
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.993e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

VQSLOD
type: SiteQuality
SIO_000300: 7.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.09e0

FS
type: SiteQuality
SIO_000300: 2.448e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

DP
type: SiteQuality
SIO_000300: 7.290847e6

QD
type: SiteQuality
SIO_000300: 1.491e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -9.8e-2

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5009
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53591
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.77e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.83e0

DP
type: SiteQuality
SIO_000300: 7.290796e6

QD
type: SiteQuality
SIO_000300: 1.646e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53591
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5005
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.025e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.763e0

QD
type: SiteQuality
SIO_000300: 1.25e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.02e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

DP
type: SiteQuality
SIO_000300: 7.290963e6

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 2.454e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.88e-1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5007
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53588
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 866
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.57e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

QD
type: SiteQuality
SIO_000300: 1.603e1

DP
type: SiteQuality
SIO_000300: 7.291235e6

VQSLOD
type: SiteQuality
SIO_000300: 1.77e-1

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53590
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 248
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5001
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.94e-1

FS
type: SiteQuality
SIO_000300: 1.469e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

QD
type: SiteQuality
SIO_000300: 1.347e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

DP
type: SiteQuality
SIO_000300: 7.290538e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-1

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.804920238324044e-4
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.39e-1

QD
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SIO_000300: 1.194e1

FS
type: SiteQuality
SIO_000300: 1.115e0

VQSLOD
type: SiteQuality
SIO_000300: 3.78e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.571e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 7.291073e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.859e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: -1.318e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.084e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e0

FS
type: SiteQuality
SIO_000300: 5.055e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.583e0

DP
type: SiteQuality
SIO_000300: 7.290287e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.88e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 31

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 248
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 25
allele frequency: 2.888837531777213e-3
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.995743022454058e-5
allele num: 66714
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.84e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 7.292943e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.1e0

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.445e1

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 12
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GenotypeQuality
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GenotypeQuality
all individuals: 215
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 851
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variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e0

MQRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.261e1

MQ
type: SiteQuality
SIO_000300: 5.962e1

DP
type: SiteQuality
SIO_000300: 7.288717e6

FS
type: SiteQuality
SIO_000300: 2.482e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.46e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 214
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 11
allele frequency: 6.670709520921771e-4
allele num: 16490
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.51e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.281e0

ClippingRankSum
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QD
type: SiteQuality
SIO_000300: 1.375e1

VQSLOD
type: SiteQuality
SIO_000300: 8.179999999999999e-1

FS
type: SiteQuality
SIO_000300: 5.42e-1

DP
type: SiteQuality
SIO_000300: 7.28886e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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QD
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SIO_000300: 1.448e1

FS
type: SiteQuality
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BaseQRankSum
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SIO_000300: 4.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

DP
type: SiteQuality
SIO_000300: 7.287303e6

MQRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.176e0

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.418e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.087e0

DP
type: SiteQuality
SIO_000300: 7.286527e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.24e-1

MQRankSum
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VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.09e-1

QD
type: SiteQuality
SIO_000300: 1.311e1

GenotypeQuality
all individuals: 14
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 809
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GenotypeQuality
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GenotypeQuality
all individuals: 234
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GenotypeQuality
all individuals: 4613
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GenotypeQuality
all individuals: 154
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.283388e6

VQSLOD
type: SiteQuality
SIO_000300: 7.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.168e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 4.032e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

QD
type: SiteQuality
SIO_000300: 1.45e1

MQRankSum
type: SiteQuality
SIO_000300: 7.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.058e0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
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GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.227897838899803e-4
allele num: 16288
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.049e1

DP
type: SiteQuality
SIO_000300: 7.282452e6

MQ
type: SiteQuality
SIO_000300: 5.734e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.318e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.62e-1

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53587
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 153
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

DP
type: SiteQuality
SIO_000300: 7.281485e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.041e0

MQRankSum
type: SiteQuality
SIO_000300: 3.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.988e1

FS
type: SiteQuality
SIO_000300: 5.177e0

QD
type: SiteQuality
SIO_000300: 1.426e1

GenotypeDepth
all individuals: 439
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 260
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 5
bin: 1.75e1
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GenotypeQuality
all individuals: 4220
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 120
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53587
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50195253829979e-5
allele num: 66580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.235e0

MQRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

DP
type: SiteQuality
SIO_000300: 7.278001e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.136e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 2.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.57e-1

GenotypeDepth
all individuals: 2560
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 73
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 214
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 260
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variant carriers: 0

GenotypeQuality
all individuals: 315
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variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 127
bin: 3.25e1
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GenotypeQuality
all individuals: 39
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GenotypeQuality
all individuals: 23
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 767
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variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53587
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 222
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502133028901039e-5
allele num: 66572
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728309713100588e-4
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16144
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

FS
type: SiteQuality
SIO_000300: 5.85e-1

QD
type: SiteQuality
SIO_000300: 1.38e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.26e-1

DP
type: SiteQuality
SIO_000300: 7.277638e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 190
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 312
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GenotypeQuality
all individuals: 300
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.30596544330937e-5
allele num: 15858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66476
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.597e1

MQ
type: SiteQuality
SIO_000300: 5.884e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.56e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.260021e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.427e0

VQSLOD
type: SiteQuality
SIO_000300: -1.502e0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 37
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 215
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GenotypeQuality
all individuals: 111
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GenotypeQuality
all individuals: 255
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15644
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.241989e6

MQRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.131e0

FS
type: SiteQuality
SIO_000300: 1.6851e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.196e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.251e0

QD
type: SiteQuality
SIO_000300: 1.453e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 150
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.304631441617743e-4
allele num: 15330
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.6571e1

DP
type: SiteQuality
SIO_000300: 7.232992e6

MQ
type: SiteQuality
SIO_000300: 5.89e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

MQRankSum
type: SiteQuality
SIO_000300: -1.067e0

QD
type: SiteQuality
SIO_000300: 1.793e1

VQSLOD
type: SiteQuality
SIO_000300: -4.135e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

GenotypeQuality
all individuals: 250
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 424
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variant carriers: 0

GenotypeQuality
all individuals: 249
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GenotypeQuality
all individuals: 458
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GenotypeQuality
all individuals: 350
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 168
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GenotypeQuality
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GenotypeQuality
all individuals: 215
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66162
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

QD
type: SiteQuality
SIO_000300: 1.367e1

DP
type: SiteQuality
SIO_000300: 7.230673e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.669999999999999e-1

FS
type: SiteQuality
SIO_000300: 4.853e0

GenotypeQuality
all individuals: 250
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 3.25e1
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GenotypeQuality
all individuals: 705
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53585
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66154
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.6e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

VQSLOD
type: SiteQuality
SIO_000300: 6.11e-1

FS
type: SiteQuality
SIO_000300: 2.192e0

QD
type: SiteQuality
SIO_000300: 1.326e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.106e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 7.230605e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1382
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 6.75e1
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GenotypeQuality
all individuals: 53585
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 215
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66154
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729206294310911e-4
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.11e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.106e0

FS
type: SiteQuality
SIO_000300: 2.192e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 7.230605e6

QD
type: SiteQuality
SIO_000300: 1.326e1

GenotypeQuality
all individuals: 68
bin: 7.75e1
variant carriers: 8

GenotypeQuality
all individuals: 35
bin: 8.25e1
variant carriers: 12

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 6

GenotypeQuality
all individuals: 1125
bin: 9.75e1
variant carriers: 1094

GenotypeQuality
all individuals: 17
bin: 8.75e1
variant carriers: 6

GenotypeQuality
all individuals: 378
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 10

GenotypeQuality
all individuals: 58
bin: 7.25e1
variant carriers: 10

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1864
bin: 7.5e0
variant carriers: 16

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 14

GenotypeQuality
all individuals: 277
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2484
bin: 6.25e1
variant carriers: 10

GenotypeQuality
all individuals: 897
bin: 2.25e1
variant carriers: 9

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 10

GenotypeQuality
all individuals: 239
bin: 3.75e1
variant carriers: 9

South Asian
type: Population
allele count: 760
allele frequency: 1.174289245982695e-1
allele num: 6472
num of homozygotes: 58

Latino
type: Population
allele count: 12
allele frequency: 7.317073170731707e-2
allele num: 164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 435
allele frequency: 1.385350318471338e-1
allele num: 3140
num of homozygotes: 24

East Asian
type: Population
allele count: 2
allele frequency: 1.041666666666667e-2
allele num: 192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 53
allele frequency: 1.0e-1
allele num: 530
num of homozygotes: 1

Other
type: Population
allele count: 13
allele frequency: 1.140350877192982e-1
allele num: 114
num of homozygotes: 1

VQSLOD
type: SiteQuality
SIO_000300: 5.95e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.26e-2

QD
type: SiteQuality
SIO_000300: 1.672e1

DP
type: SiteQuality
SIO_000300: 1.22863e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.01e-1

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4725
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1742
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
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GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
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GenotypeQuality
all individuals: 67
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 38
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.858776443682104e-4
allele num: 3498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.284e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.64e-1

QD
type: SiteQuality
SIO_000300: 1.1e1

DP
type: SiteQuality
SIO_000300: 1.48664e5

ClippingRankSum
type: SiteQuality
SIO_000300: -6.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.318e0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 564
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variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1650
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GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
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GenotypeQuality
all individuals: 4804
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
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GenotypeQuality
all individuals: 35
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GenotypeQuality
all individuals: 72
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variant carriers: 5

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 6.641870350690755e-4
allele num: 7528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3522
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.50418e5

BaseQRankSum
type: SiteQuality
SIO_000300: 8.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.34e-2

FS
type: SiteQuality
SIO_000300: 3.127e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: -7.3e-1

QD
type: SiteQuality
SIO_000300: 7.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

GenotypeQuality
all individuals: 83
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4546
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.681684097613301e-4
allele num: 7458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.42e-2

FS
type: SiteQuality
SIO_000300: 4.714e0

QD
type: SiteQuality
SIO_000300: 2.203e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.54252e5

MQ
type: SiteQuality
SIO_000300: 5.976e1

GenotypeQuality
all individuals: 35
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
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GenotypeQuality
all individuals: 154
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GenotypeQuality
all individuals: 479
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GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.75e1
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GenotypeQuality
all individuals: 84
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GenotypeQuality
all individuals: 4561
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GenotypeQuality
all individuals: 66
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GenotypeQuality
all individuals: 71
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GenotypeQuality
all individuals: 41
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GenotypeQuality
all individuals: 58
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GenotypeQuality
all individuals: 529
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.845759817871372e-4
allele num: 3514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.44e-2

QD
type: SiteQuality
SIO_000300: 1.402e1

VQSLOD
type: SiteQuality
SIO_000300: -1.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQRankSum
type: SiteQuality
SIO_000300: -1.076e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.64e0

DP
type: SiteQuality
SIO_000300: 1.5438e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.67e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 8.75e1
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GenotypeQuality
all individuals: 1476
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GenotypeQuality
all individuals: 125
bin: 2.5e0
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
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GenotypeQuality
all individuals: 102
bin: 9.75e1
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GenotypeQuality
all individuals: 469
bin: 2.25e1
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GenotypeQuality
all individuals: 21
bin: 3.75e1
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GenotypeQuality
all individuals: 5199
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
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GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 624
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variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3762
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.792114695340502e-3
allele num: 558
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-2

QD
type: SiteQuality
SIO_000300: 1.695e1

VQSLOD
type: SiteQuality
SIO_000300: 6.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.92e-1

DP
type: SiteQuality
SIO_000300: 1.65125e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.94e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.66e-2

MQ
type: SiteQuality
SIO_000300: 6.04e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e-1

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
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GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1439
bin: 7.5e0
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GenotypeQuality
all individuals: 625
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5216
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.653927813163482e-4
allele num: 3768
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.15473441108545e-3
allele num: 866
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.28e-1

DP
type: SiteQuality
SIO_000300: 1.65542e5

QD
type: SiteQuality
SIO_000300: 1.688e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.78e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.58e-1

GenotypeQuality
all individuals: 2245
bin: 9.75e1
variant carriers: 2212

GenotypeQuality
all individuals: 4068
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 972
bin: 7.5e0
variant carriers: 47

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 7

GenotypeQuality
all individuals: 123
bin: 2.25e1
variant carriers: 12

GenotypeQuality
all individuals: 83
bin: 7.75e1
variant carriers: 8

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 5

GenotypeQuality
all individuals: 18
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 267
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 6.75e1
variant carriers: 7

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 23

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 79
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 13
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 4

Latino
type: Population
allele count: 40
allele frequency: 2.127659574468085e-1
allele num: 188
num of homozygotes: 4

African
type: Population
allele count: 111
allele frequency: 1.989247311827957e-1
allele num: 558
num of homozygotes: 15

European (Finnish)
type: Population
allele count: 346
allele frequency: 2.429775280898877e-1
allele num: 1424
num of homozygotes: 34

European (Non-Finnish)
type: Population
allele count: 730
allele frequency: 1.896103896103896e-1
allele num: 3850
num of homozygotes: 64

South Asian
type: Population
allele count: 1140
allele frequency: 1.496455762667367e-1
allele num: 7618
num of homozygotes: 81

East Asian
type: Population
allele count: 49
allele frequency: 2.474747474747475e-1
allele num: 198
num of homozygotes: 5

Other
type: Population
allele count: 39
allele frequency: 2.215909090909091e-1
allele num: 176
num of homozygotes: 6

QD
type: SiteQuality
SIO_000300: 1.333e1

VQSLOD
type: SiteQuality
SIO_000300: 6.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.85e-2

DP
type: SiteQuality
SIO_000300: 2.79027e5

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.1e0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5377
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1102
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variant carriers: 2

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 1

GenotypeQuality
all individuals: 16
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variant carriers: 3

GenotypeQuality
all individuals: 66
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variant carriers: 2

GenotypeQuality
all individuals: 736
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variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 201
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 45
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 17
allele frequency: 1.19047619047619e-2
allele num: 1428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7616
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 5.681818181818182e-3
allele num: 176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.76e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.907e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.78e-1

QD
type: SiteQuality
SIO_000300: 2.78e0

MQRankSum
type: SiteQuality
SIO_000300: -1.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.667e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.25e-1

DP
type: SiteQuality
SIO_000300: 1.82863e5

GenotypeQuality
all individuals: 56
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
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variant carriers: 0

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 110
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 5465
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.314060446780552e-4
allele num: 7610
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.83969e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

FS
type: SiteQuality
SIO_000300: 1.0681e1

VQSLOD
type: SiteQuality
SIO_000300: 7.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.28e-2

QD
type: SiteQuality
SIO_000300: 1.228e1

MQ
type: SiteQuality
SIO_000300: 6.048e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.395e0

GenotypeQuality
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5343
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 110
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.972457627118644e-4
allele num: 7552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3810
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.54e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.67e-2

DP
type: SiteQuality
SIO_000300: 1.82242e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.159999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.85e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

GenotypeQuality
all individuals: 108
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
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variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 176
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GenotypeQuality
all individuals: 5007
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.75e1
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 35
bin: 5.25e1
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GenotypeQuality
all individuals: 380
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GenotypeQuality
all individuals: 27
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GenotypeQuality
all individuals: 215
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variant carriers: 1

GenotypeQuality
all individuals: 56
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variant carriers: 0

GenotypeQuality
all individuals: 169
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variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.050505050505051e-3
allele num: 198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3758
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.7731e5

VQSLOD
type: SiteQuality
SIO_000300: 5.47e-1

QD
type: SiteQuality
SIO_000300: 1.246e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.65e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e-1

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
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GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 65
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GenotypeQuality
all individuals: 51
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GenotypeQuality
all individuals: 561
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GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 160
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GenotypeQuality
all individuals: 104
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GenotypeQuality
all individuals: 26
bin: 4.75e1
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GenotypeQuality
all individuals: 217
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variant carriers: 2

GenotypeQuality
all individuals: 163
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variant carriers: 0

GenotypeQuality
all individuals: 54
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GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.387931034482759e-4
allele num: 3712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.236e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

QD
type: SiteQuality
SIO_000300: 1.386e1

VQSLOD
type: SiteQuality
SIO_000300: -1.473e0

FS
type: SiteQuality
SIO_000300: 5.348e0

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

DP
type: SiteQuality
SIO_000300: 1.73406e5

ClippingRankSum
type: SiteQuality
SIO_000300: -2.03e-1

MQ
type: SiteQuality
SIO_000300: 5.875e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.76e-2

GenotypeQuality
all individuals: 236
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5881
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 243
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 2.25e1
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GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 177
bin: 2.75e1
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GenotypeQuality
all individuals: 2888
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
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GenotypeQuality
all individuals: 300
bin: 5.75e1
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GenotypeQuality
all individuals: 1371
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502268425322237e-5
allele num: 66566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.234e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.83e-1

FS
type: SiteQuality
SIO_000300: 9.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

InbreedingCoeff
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SIO_000300: -5.0e-4

BaseQRankSum
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SIO_000300: -2.774e0

DP
type: SiteQuality
SIO_000300: 1.884313e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.06e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.032140691328078e-4
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.46e-1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.885837e6

MQ
type: SiteQuality
SIO_000300: 5.895e1

VQSLOD
type: SiteQuality
SIO_000300: -1.275e0

ClippingRankSum
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SIO_000300: -1.503e0

InbreedingCoeff
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SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 1.0025e1

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

BaseQRankSum
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SIO_000300: -1.866e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66608
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.887e0

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-2

DP
type: SiteQuality
SIO_000300: 1.886418e6

BaseQRankSum
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SIO_000300: 4.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.63e-1

ClippingRankSum
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SIO_000300: 1.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.168e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66610
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.335e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-2

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.888347e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.98e-1

FS
type: SiteQuality
SIO_000300: 6.083e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.471e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

DP
type: SiteQuality
SIO_000300: 1.890799e6

QD
type: SiteQuality
SIO_000300: 1.354e1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.249e0

FS
type: SiteQuality
SIO_000300: 7.265e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.409999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

ReadPosRankSum
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MQ
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.155e0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.053e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
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South Asian
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allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

MQ
type: SiteQuality
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VQSLOD
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BaseQRankSum
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MQRankSum
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QD
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FS
type: SiteQuality
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ClippingRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 5.998440405494571e-5
allele num: 66684
num of homozygotes: 0

African
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East Asian
type: Population
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MQ
type: SiteQuality
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InbreedingCoeff
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DP
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ReadPosRankSum
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FS
type: SiteQuality
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BaseQRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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Other
type: Population
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.999670036296008e-5
allele num: 66674
num of homozygotes: 0

African
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South Asian
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VQSLOD
type: SiteQuality
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FS
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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MQ
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ClippingRankSum
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QD
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 49

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 4
allele frequency: 2.422774076317383e-4
allele num: 16510
num of homozygotes: 0

Latino
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allele count: 6
allele frequency: 5.184929139301763e-4
allele num: 11572
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
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allele count: 38
allele frequency: 5.698176583493282e-4
allele num: 66688
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 5.5e0

QD
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MQRankSum
type: SiteQuality
SIO_000300: 1.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.34e-1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.087e0

DP
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SIO_000300: 1.897219e6

BaseQRankSum
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SIO_000300: 5.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.9e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.644e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.72e-1

FS
type: SiteQuality
SIO_000300: 6.156e0

QD
type: SiteQuality
SIO_000300: 9.18e0

MQRankSum
type: SiteQuality
SIO_000300: 5.09e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

VQSLOD
type: SiteQuality
SIO_000300: -8.108e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.68e-1

DP
type: SiteQuality
SIO_000300: 1.897869e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.991727610598249e-5
allele num: 66728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.222e1

VQSLOD
type: SiteQuality
SIO_000300: 7.59e-1

MQ
type: SiteQuality
SIO_000300: 5.919e1

DP
type: SiteQuality
SIO_000300: 1.898164e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.36e-1

FS
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.422e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 9.609840476648087e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.107e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

QD
type: SiteQuality
SIO_000300: 1.979e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.855e0

DP
type: SiteQuality
SIO_000300: 1.898074e6

MQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
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BaseQRankSum
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SIO_000300: -1.95e0

QD
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MQ
type: SiteQuality
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DP
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.78e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.09e0

VQSLOD
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DP
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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ClippingRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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QD
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SIO_000300: 1.131e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Finnish)
type: Population
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allele frequency: 1.519756838905775e-4
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 6
allele frequency: 8.992266650680415e-5
allele num: 66724
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East Asian
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allele frequency: 3.466605038132656e-4
allele num: 8654
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African
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allele frequency: 9.611687812379854e-5
allele num: 10404
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South Asian
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allele frequency: 6.05766900896535e-5
allele num: 16508
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
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DP
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BaseQRankSum
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VQSLOD
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MQRankSum
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QD
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ReadPosRankSum
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

Latino
type: Population
allele count: 2
allele frequency: 1.729206294310911e-4
allele num: 11566
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

Other
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MQRankSum
type: SiteQuality
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BaseQRankSum
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DP
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QD
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InbreedingCoeff
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SIO_000300: -1.0e-4

ClippingRankSum
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SIO_000300: -3.88e-1

FS
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MQ
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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SIO_000300: -1.058e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 78

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 2
allele frequency: 3.053435114503817e-4
allele num: 6550
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
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allele count: 73
allele frequency: 1.094387143199808e-3
allele num: 66704
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16508
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Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele frequency: 1.728907330567082e-4
allele num: 11568
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
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QD
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InbreedingCoeff
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ClippingRankSum
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SIO_000300: -3.9e-2

VQSLOD
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ReadPosRankSum
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SIO_000300: 3.03e-1

FS
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MQ
type: SiteQuality
SIO_000300: 5.972e1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

BaseQRankSum
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SIO_000300: -1.249e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66680
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
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allele count: 5
allele frequency: 4.324511330219685e-4
allele num: 11562
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6522
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Other
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
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SIO_000300: 1.52e0

MQ
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SIO_000300: 6.026e1

QD
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MQRankSum
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InbreedingCoeff
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SIO_000300: -2.0e-4

FS
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SIO_000300: 7.866e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.023e0

ClippingRankSum
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SIO_000300: -1.319e0

DP
type: SiteQuality
SIO_000300: 1.891098e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.535155050660117e-4
allele num: 6514
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.161e0

VQSLOD
type: SiteQuality
SIO_000300: 2.72e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.83e-1

FS
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.889324e6

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.327e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 6.671518680252305e-4
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923446816695518e-4
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.350378105869643e-4
allele num: 66648
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6502
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -2.38e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.51e-1

InbreedingCoeff
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SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 1.518e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.88752e6

BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

South Asian
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allele frequency: 1.213150551983501e-4
allele num: 16486
num of homozygotes: 0

European (Finnish)
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allele num: 6502
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Other
type: Population
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allele frequency: 0.0e0
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Latino
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African
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East Asian
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allele num: 8652
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MQ
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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DP
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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FS
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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Latino
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allele num: 11550
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East Asian
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European (Finnish)
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African
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allele frequency: 9.620935154897056e-5
allele num: 10394
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European (Non-Finnish)
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allele frequency: 1.050987928652934e-4
allele num: 66604
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BaseQRankSum
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MQ
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QD
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ReadPosRankSum
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DP
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MQRankSum
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ClippingRankSum
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VQSLOD
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FS
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Other
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DP
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FS
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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QD
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

DP
type: SiteQuality
SIO_000300: 1.873703e6

FS
type: SiteQuality
SIO_000300: 1.528e0

QD
type: SiteQuality
SIO_000300: 1.523e1

VQSLOD
type: SiteQuality
SIO_000300: 5.620000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

GenotypeQuality
all individuals: 33347
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508341126429153e-5
allele num: 66298
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

DP
type: SiteQuality
SIO_000300: 1.859364e6

MQRankSum
type: SiteQuality
SIO_000300: -9.3e-2

FS
type: SiteQuality
SIO_000300: 2.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.067e0

QD
type: SiteQuality
SIO_000300: 3.137e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeQuality
all individuals: 268
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.69414014953921e-5
allele num: 11502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.848598e6

MQRankSum
type: SiteQuality
SIO_000300: -5.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.508e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.83e-1

FS
type: SiteQuality
SIO_000300: 5.395e0

VQSLOD
type: SiteQuality
SIO_000300: -6.393e-1

MQ
type: SiteQuality
SIO_000300: 5.892e1

QD
type: SiteQuality
SIO_000300: 1.122e1

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 897
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32070
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
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variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66026
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.315e0

VQSLOD
type: SiteQuality
SIO_000300: 8.44e-1

DP
type: SiteQuality
SIO_000300: 1.830028e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.189e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.21e1

MQRankSum
type: SiteQuality
SIO_000300: 7.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 325
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7995
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 534
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variant carriers: 0

GenotypeQuality
all individuals: 2062
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1300
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variant carriers: 0

GenotypeQuality
all individuals: 822
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GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 501
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GenotypeQuality
all individuals: 892
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variant carriers: 0

GenotypeQuality
all individuals: 31367
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2554
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16328
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.671179883945841e-5
allele num: 10340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.789e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.01e-1

QD
type: SiteQuality
SIO_000300: 1.551e1

DP
type: SiteQuality
SIO_000300: 1.812439e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.75e-1

GenotypeQuality
all individuals: 7141
bin: 6.75e1
variant carriers: 60

GenotypeQuality
all individuals: 805
bin: 2.75e1
variant carriers: 16

GenotypeQuality
all individuals: 68
bin: 2.5e0
variant carriers: 11

GenotypeQuality
all individuals: 29924
bin: 6.25e1
variant carriers: 48

GenotypeQuality
all individuals: 1004
bin: 3.25e1
variant carriers: 17

GenotypeQuality
all individuals: 274
bin: 5.25e1
variant carriers: 32

GenotypeQuality
all individuals: 10497
bin: 9.75e1
variant carriers: 8046

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 12

GenotypeQuality
all individuals: 2294
bin: 7.75e1
variant carriers: 57

GenotypeQuality
all individuals: 718
bin: 9.25e1
variant carriers: 81

GenotypeQuality
all individuals: 229
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variant carriers: 28

GenotypeQuality
all individuals: 2058
bin: 7.25e1
variant carriers: 49

GenotypeQuality
all individuals: 2614
bin: 2.25e1
variant carriers: 12

GenotypeQuality
all individuals: 208
bin: 4.75e1
variant carriers: 20

European (Finnish)
type: Population
allele count: 69
allele frequency: 1.087299086038449e-2
allele num: 6346
num of homozygotes: 1

East Asian
type: Population
allele count: 2532
allele frequency: 2.966955706585423e-1
allele num: 8534
num of homozygotes: 371

Latino
type: Population
allele count: 2283
allele frequency: 2.009329343425453e-1
allele num: 11362
num of homozygotes: 249

European (Non-Finnish)
type: Population
allele count: 402
allele frequency: 6.109422492401216e-3
allele num: 65800
num of homozygotes: 3

African
type: Population
allele count: 4292
allele frequency: 4.165372670807453e-1
allele num: 10304
num of homozygotes: 913

South Asian
type: Population
allele count: 580
allele frequency: 3.555664541441883e-2
allele num: 16312
num of homozygotes: 15

Other
type: Population
allele count: 40
allele frequency: 4.514672686230248e-2
allele num: 886
num of homozygotes: 1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.749e0

QD
type: SiteQuality
SIO_000300: 1.627e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.357e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.8e-2

MQ
type: SiteQuality
SIO_000300: 5.968e1

VQSLOD
type: SiteQuality
SIO_000300: 8.210000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

DP
type: SiteQuality
SIO_000300: 1.804377e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-2

GenotypeQuality
all individuals: 3257
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1473
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
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GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1272
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2293
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GenotypeQuality
all individuals: 8169
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GenotypeQuality
all individuals: 241
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GenotypeQuality
all individuals: 751
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GenotypeQuality
all individuals: 225
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GenotypeQuality
all individuals: 3063
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 276
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2550
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65722
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.922837100545596e-4
allele num: 10264
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.02e-1

FS
type: SiteQuality
SIO_000300: 3.033e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.912e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
SIO_000300: 1.497e1