2-152553991-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152553991
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152553991
    reference: chr 2
allele count: 2
allele frequency: 1.65898005905969e-5
allele num: 120556
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1258-20A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1258-20A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1258-20A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.157-20A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1258-20A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1258-20A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1258-20A>C
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4544
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5226
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5028
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44384
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

2-152553994-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152553994
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152553994
    reference: chr 2
allele count: 1
allele frequency: 8.296276631047985e-6
allele num: 120536
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1258-23A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1258-23A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1258-23A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1258-23A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1258-23A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1258-23A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.157-23A>C
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44218
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-152554011-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554011
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554011
    reference: chr 2
allele count: 1
allele frequency: 8.301648707433296e-6
allele num: 120458
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1258-40A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1258-40A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1258-40A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1258-40A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1258-40A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.157-40A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1258-40A>G
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16096
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43291
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 528
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genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5225
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-152554016-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554016
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554016
    reference: chr 2
allele count: 1
allele frequency: 8.304406317992327e-6
allele num: 120418
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1257+42C>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1257+42C>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1257+42C>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1257+42C>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1257+42C>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1257+42C>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.156+42C>A
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16132
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30733
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4542
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5225
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

2-152554020-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554020
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554021
    reference: chr 2
allele count: 53
allele frequency: 4.405799029061648e-4
allele num: 120296
alternate allele: CT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1257+37dupA
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1257+37dupA
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1257+37dupA
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1257+37dupA
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1257+37dupA
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1257+37dupA
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.156+37dupA
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 16117
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 30505
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4847
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

2-152554024-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554024
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554024
    reference: chr 2
allele count: 1
allele frequency: 8.30357884248111e-6
allele num: 120430
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1257+34A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1257+34A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1257+34A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1257+34A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.156+34A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1257+34A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1257+34A>G
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/2-152554030-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554030
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554030
    reference: chr 2
allele count: 1
allele frequency: 8.30357884248111e-6
allele num: 120430
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1257+28G>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.156+28G>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1257+28G>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1257+28G>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1257+28G>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1257+28G>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1257+28G>T
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43536
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4877
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5255
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

2-152554031-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554031
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554031
    reference: chr 2
allele count: 1
allele frequency: 8.301510874979247e-6
allele num: 120460
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1257+27T>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1257+27T>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1257+27T>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1257+27T>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.156+27T>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1257+27T>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1257+27T>C
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4890
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43577
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5254
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ

2-152554033-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554033
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554033
    reference: chr 2
allele count: 4
allele frequency: 3.319942896982172e-5
allele num: 120484
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1257+25T>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1257+25T>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1257+25T>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1257+25T>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1257+25T>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.156+25T>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1257+25T>C
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30784
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16263
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5258
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4894
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

2-152554044-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554044
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554044
    reference: chr 2
allele count: 11
allele frequency: 9.13090395949199e-5
allele num: 120470
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1257+14C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1257+14C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.156+14C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1257+14C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1257+14C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1257+14C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1257+14C>T
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4920
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD

2-152554045-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554045
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554045
    reference: chr 2
allele count: 126
allele frequency: 1.045782012549384e-3
allele num: 120484
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1257+13A>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1257+13A>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1257+13A>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1257+13A>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.156+13A>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1257+13A>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1257+13A>T
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 16329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 9.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30869
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4576
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43924
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

2-152554045-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554045
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554045
    reference: chr 2
allele count: 1
allele frequency: 8.29985724245543e-6
allele num: 120484
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1257+13A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1257+13A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.156+13A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1257+13A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1257+13A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1257+13A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1257+13A>C
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30869
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43924
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4901
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

2-152554051-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554051
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554051
    reference: chr 2
allele count: 2
allele frequency: 1.659695943703114e-5
allele num: 120504
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1257+7A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1257+7A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1257+7A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.156+7A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1257+7A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1257+7A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1257+7A>G
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4604
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4933
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5237
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1257+7A>G
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

2-152554053-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554053
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554053
    reference: chr 2
allele count: 1
allele frequency: 8.301924386072691e-6
allele num: 120454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1257+5G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1257+5G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1257+5G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.156+5G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1257+5G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1257+5G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1257+5G>A
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44343
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
hgvs: c.1257+5G>A
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS

2-152554055-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554055
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554055
    reference: chr 2
allele count: 1
allele frequency: 8.299168423323983e-6
allele num: 120494
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1257+3A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1257+3A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1257+3A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1257+3A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1257+3A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1257+3A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.156+3A>G
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44475
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 9.25e1
  variant carriers: 0
hgvs: c.1257+3A>G
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/2-152554058-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554058
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554058
    reference: chr 2
allele count: 1
allele frequency: 8.298204268596276e-6
allele num: 120508
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1257T>G
  hgvsp: ENSP00000474498.1:p.Asp419Glu
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.156T>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1257T>G
  hgvsp: ENSP00000386259.1:p.Asp419Glu
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1257T>G
  hgvsp: ENSP00000380505.3:p.Asp419Glu
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1257T>G
  hgvsp: ENSP00000473894.1:p.Asp419Glu
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1257T>G
  hgvsp: ENSP00000172853.10:p.Asp419Glu
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1257T>G
  hgvsp: ENSP00000416578.2:p.Asp419Glu
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31039
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4954
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44573
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp419Glu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP

2-152554062-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554062
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554062
    reference: chr 2
allele count: 1
allele frequency: 8.298617450332775e-6
allele num: 120502
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1253G>C
  hgvsp: ENSP00000380505.3:p.Ser418Thr
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1253G>C
  hgvsp: ENSP00000474498.1:p.Ser418Thr
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1253G>C
  hgvsp: ENSP00000416578.2:p.Ser418Thr
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1253G>C
  hgvsp: ENSP00000172853.10:p.Ser418Thr
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1253G>C
  hgvsp: ENSP00000473894.1:p.Ser418Thr
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1253G>C
  hgvsp: ENSP00000386259.1:p.Ser418Thr
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.152G>C
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4945
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser418Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

2-152554066-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554066
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554066
    reference: chr 2
allele count: 1
allele frequency: 8.296964970213896e-6
allele num: 120526
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1249A>T
  hgvsp: ENSP00000474498.1:p.Ser417Cys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.148A>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1249A>T
  hgvsp: ENSP00000416578.2:p.Ser417Cys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1249A>T
  hgvsp: ENSP00000386259.1:p.Ser417Cys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1249A>T
  hgvsp: ENSP00000380505.3:p.Ser417Cys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1249A>T
  hgvsp: ENSP00000172853.10:p.Ser417Cys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1249A>T
  hgvsp: ENSP00000473894.1:p.Ser417Cys
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16687
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser417Cys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

2-152554075-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554075
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554075
    reference: chr 2
allele count: 1
allele frequency: 8.296276631047985e-6
allele num: 120536
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1240C>T
  hgvsp: ENSP00000416578.2:p.Gln414Ter
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1240C>T
  hgvsp: ENSP00000386259.1:p.Gln414Ter
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1240C>T
  hgvsp: ENSP00000474498.1:p.Gln414Ter
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1240C>T
  hgvsp: ENSP00000172853.10:p.Gln414Ter
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1240C>T
  hgvsp: ENSP00000380505.3:p.Gln414Ter
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.139C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1240C>T
  hgvsp: ENSP00000473894.1:p.Gln414Ter
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16776
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gln414Ter
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum

2-152554085-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554085
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554085
    reference: chr 2
allele count: 5
allele frequency: 4.148069488460071e-5
allele num: 120538
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1230T>C
  hgvsp: ENST00000427231.2:c.1230T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1230T>C
  hgvsp: ENST00000604864.1:c.1230T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1230T>C
  hgvsp: ENST00000397345.3:c.1230T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1230T>C
  hgvsp: ENST00000603639.1:c.1230T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1230T>C
  hgvsp: ENST00000409198.1:c.1230T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.129T>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1230T>C
  hgvsp: ENST00000172853.10:c.1230T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4978
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp410Asp
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

2-152554088-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554088
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554088
    reference: chr 2
allele count: 2
allele frequency: 1.659255326209597e-5
allele num: 120536
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1227C>T
  hgvsp: ENST00000409198.1:c.1227C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1227C>T
  hgvsp: ENST00000427231.2:c.1227C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1227C>T
  hgvsp: ENST00000172853.10:c.1227C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1227C>T
  hgvsp: ENST00000397345.3:c.1227C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1227C>T
  hgvsp: ENST00000604864.1:c.1227C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1227C>T
  hgvsp: ENST00000603639.1:c.1227C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.126C>T
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31277
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5236
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4987
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu409Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

2-152554090-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554090
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554090
    reference: chr 2
allele count: 2
allele frequency: 1.659255326209597e-5
allele num: 120536
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1225C>T
  hgvsp: ENSP00000416578.2:p.Leu409Phe
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1225C>T
  hgvsp: ENSP00000386259.1:p.Leu409Phe
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1225C>T
  hgvsp: ENSP00000172853.10:p.Leu409Phe
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1225C>T
  hgvsp: ENSP00000474498.1:p.Leu409Phe
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1225C>T
  hgvsp: ENSP00000380505.3:p.Leu409Phe
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1225C>T
  hgvsp: ENSP00000473894.1:p.Leu409Phe
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.124C>T
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16909
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4984
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45347
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu409Phe
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

2-152554091-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554091
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554091
    reference: chr 2
allele count: 1
allele frequency: 8.29655195300833e-6
allele num: 120532
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.123G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1224G>A
  hgvsp: ENST00000604864.1:c.1224G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1224G>A
  hgvsp: ENST00000397345.3:c.1224G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1224G>A
  hgvsp: ENST00000427231.2:c.1224G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1224G>A
  hgvsp: ENST00000172853.10:c.1224G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1224G>A
  hgvsp: ENST00000603639.1:c.1224G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1224G>A
  hgvsp: ENST00000409198.1:c.1224G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4979
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys408Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS

2-152554104-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554104
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554104
    reference: chr 2
allele count: 9
allele frequency: 7.470615578723687e-5
allele num: 120472
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1211C>T
  hgvsp: ENSP00000416578.2:p.Thr404Ile
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.110C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1211C>T
  hgvsp: ENSP00000172853.10:p.Thr404Ile
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1211C>T
  hgvsp: ENSP00000474498.1:p.Thr404Ile
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1211C>T
  hgvsp: ENSP00000380505.3:p.Thr404Ile
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1211C>T
  hgvsp: ENSP00000473894.1:p.Thr404Ile
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1211C>T
  hgvsp: ENSP00000386259.1:p.Thr404Ile
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45346
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr404Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

2-152554108-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554108
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554108
    reference: chr 2
allele count: 1
allele frequency: 8.302062232258493e-6
allele num: 120452
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1207G>A
  hgvsp: ENSP00000386259.1:p.Glu403Lys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1207G>A
  hgvsp: ENSP00000416578.2:p.Glu403Lys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1207G>A
  hgvsp: ENSP00000473894.1:p.Glu403Lys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1207G>A
  hgvsp: ENSP00000380505.3:p.Glu403Lys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1207G>A
  hgvsp: ENSP00000172853.10:p.Glu403Lys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1207G>A
  hgvsp: ENSP00000474498.1:p.Glu403Lys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.106G>A
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45315
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4988
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu403Lys
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD

2-152554109-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554109
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554109
    reference: chr 2
allele count: 47
allele frequency: 3.902487628283902e-4
allele num: 120436
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1206C>T
  hgvsp: ENST00000172853.10:c.1206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1206C>T
  hgvsp: ENST00000427231.2:c.1206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.105C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1206C>T
  hgvsp: ENST00000397345.3:c.1206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1206C>T
  hgvsp: ENST00000409198.1:c.1206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1206C>T
  hgvsp: ENST00000604864.1:c.1206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1206C>T
  hgvsp: ENST00000603639.1:c.1206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31197
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 16951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4652
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45294
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys402Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

2-152554110-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554110
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554110
    reference: chr 2
allele count: 1
allele frequency: 8.303854649328218e-6
allele num: 120426
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1205G>A
  hgvsp: ENSP00000172853.10:p.Cys402Tyr
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1205G>A
  hgvsp: ENSP00000473894.1:p.Cys402Tyr
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1205G>A
  hgvsp: ENSP00000474498.1:p.Cys402Tyr
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1205G>A
  hgvsp: ENSP00000380505.3:p.Cys402Tyr
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1205G>A
  hgvsp: ENSP00000416578.2:p.Cys402Tyr
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.104G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1205G>A
  hgvsp: ENSP00000386259.1:p.Cys402Tyr
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31192
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1311
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1359
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys402Tyr
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum

2-152554112-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554112
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554112
    reference: chr 2
allele count: 1
allele frequency: 8.304544246611745e-6
allele num: 120416
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1203C>T
  hgvsp: ENST00000603639.1:c.1203C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1203C>T
  hgvsp: ENST00000427231.2:c.1203C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1203C>T
  hgvsp: ENST00000397345.3:c.1203C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1203C>T
  hgvsp: ENST00000172853.10:c.1203C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1203C>T
  hgvsp: ENST00000409198.1:c.1203C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.102C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1203C>T
  hgvsp: ENST00000604864.1:c.1203C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16978
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4991
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45338
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5202
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Tyr401Tyr
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

2-152554113-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554113
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554113
    reference: chr 2
allele count: 1
allele frequency: 8.305233958440609e-6
allele num: 120406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1202A>T
  hgvsp: ENSP00000474498.1:p.Tyr401Phe
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1202A>T
  hgvsp: ENSP00000416578.2:p.Tyr401Phe
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1202A>T
  hgvsp: ENSP00000172853.10:p.Tyr401Phe
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1202A>T
  hgvsp: ENSP00000386259.1:p.Tyr401Phe
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1202A>T
  hgvsp: ENSP00000380505.3:p.Tyr401Phe
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1202A>T
  hgvsp: ENSP00000473894.1:p.Tyr401Phe
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.101A>T
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16982
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5202
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4993
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr401Phe
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

2-152554122-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554122
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554122
    reference: chr 2
allele count: 1
allele frequency: 8.310893919750009e-6
allele num: 120324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.92G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1193G>A
  hgvsp: ENSP00000172853.10:p.Ser398Asn
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1193G>A
  hgvsp: ENSP00000473894.1:p.Ser398Asn
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1193G>A
  hgvsp: ENSP00000380505.3:p.Ser398Asn
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1193G>A
  hgvsp: ENSP00000416578.2:p.Ser398Asn
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1193G>A
  hgvsp: ENSP00000474498.1:p.Ser398Asn
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1193G>A
  hgvsp: ENSP00000386259.1:p.Ser398Asn
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4657
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45228
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5203
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser398Asn
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

2-152554126-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554126
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554126
    reference: chr 2
allele count: 6
allele frequency: 4.989770969512499e-5
allele num: 120246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1189A>G
  hgvsp: ENSP00000473894.1:p.Lys397Glu
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.88A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1189A>G
  hgvsp: ENSP00000386259.1:p.Lys397Glu
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1189A>G
  hgvsp: ENSP00000474498.1:p.Lys397Glu
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1189A>G
  hgvsp: ENSP00000172853.10:p.Lys397Glu
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1189A>G
  hgvsp: ENSP00000416578.2:p.Lys397Glu
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1189A>G
  hgvsp: ENSP00000380505.3:p.Lys397Glu
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 820
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Lys397Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

2-152554128-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554128
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554128
    reference: chr 2
allele count: 3
allele frequency: 2.495923325235449e-5
allele num: 120196
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1187C>T
  hgvsp: ENSP00000474498.1:p.Ala396Val
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1187C>T
  hgvsp: ENSP00000386259.1:p.Ala396Val
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.86C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1187C>T
  hgvsp: ENSP00000473894.1:p.Ala396Val
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1187C>T
  hgvsp: ENSP00000416578.2:p.Ala396Val
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1187C>T
  hgvsp: ENSP00000380505.3:p.Ala396Val
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1187C>T
  hgvsp: ENSP00000172853.10:p.Ala396Val
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5204
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala396Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

2-152554133-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554133
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554133
    reference: chr 2
allele count: 16
allele frequency: 1.333622284828379e-4
allele num: 119974
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.81A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1182A>C
  hgvsp: ENST00000397345.3:c.1182A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1182A>C
  hgvsp: ENST00000603639.1:c.1182A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1182A>C
  hgvsp: ENST00000409198.1:c.1182A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1182A>C
  hgvsp: ENST00000604864.1:c.1182A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1182A>C
  hgvsp: ENST00000172853.10:c.1182A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1182A>C
  hgvsp: ENST00000427231.2:c.1182A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44698
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr394Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

2-152554142-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554142
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554142
    reference: chr 2
allele count: 1
allele frequency: 8.369041242635244e-6
allele num: 119488
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1173T>C
  hgvsp: ENST00000427231.2:c.1173T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1173T>C
  hgvsp: ENST00000409198.1:c.1173T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1173T>C
  hgvsp: ENST00000172853.10:c.1173T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1173T>C
  hgvsp: ENST00000604864.1:c.1173T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1173T>C
  hgvsp: ENST00000603639.1:c.1173T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1173T>C
  hgvsp: ENST00000397345.3:c.1173T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.72T>C
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5195
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44210
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr391Tyr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

2-152554145-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554145
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554145
    reference: chr 2
allele count: 5
allele frequency: 4.197377478551401e-5
allele num: 119122
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1170C>G
  hgvsp: ENSP00000380505.3:p.Asn390Lys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1170C>G
  hgvsp: ENSP00000172853.10:p.Asn390Lys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1170C>G
  hgvsp: ENSP00000473894.1:p.Asn390Lys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.69C>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1170C>G
  hgvsp: ENSP00000416578.2:p.Asn390Lys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1170C>G
  hgvsp: ENSP00000474498.1:p.Asn390Lys
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1170C>G
  hgvsp: ENSP00000386259.1:p.Asn390Lys
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1326
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5198
  bin: 9.75e1
  variant carriers: 5
hgvs: p.Asn390Lys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

2-152554148-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554148
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554148
    reference: chr 2
allele count: 1
allele frequency: 8.406752303450132e-6
allele num: 118952
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1167A>G
  hgvsp: ENST00000397345.3:c.1167A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1167A>G
  hgvsp: ENST00000603639.1:c.1167A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1167A>G
  hgvsp: ENST00000427231.2:c.1167A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.66A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1167A>G
  hgvsp: ENST00000172853.10:c.1167A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1167A>G
  hgvsp: ENST00000604864.1:c.1167A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1167A>G
  hgvsp: ENST00000409198.1:c.1167A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5195
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4789
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu389Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-152554158-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554158
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554158
    reference: chr 2
allele count: 6
allele frequency: 5.142710208279763e-5
allele num: 116670
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1157T>G
  hgvsp: ENSP00000474498.1:p.Leu386Arg
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.56T>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1157T>G
  hgvsp: ENSP00000380505.3:p.Leu386Arg
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1157T>G
  hgvsp: ENSP00000416578.2:p.Leu386Arg
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1157T>G
  hgvsp: ENSP00000473894.1:p.Leu386Arg
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1157T>G
  hgvsp: ENSP00000172853.10:p.Leu386Arg
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1157T>G
  hgvsp: ENSP00000386259.1:p.Leu386Arg
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1243
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4583
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4306
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39212
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu386Arg
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

2-152554167-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554167
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554167
    reference: chr 2
allele count: 1
allele frequency: 8.719003940989781e-6
allele num: 114692
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.52-5G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1153-5G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1153-5G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1153-5G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1153-5G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1153-5G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1153-5G>C
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5574
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6463
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1210
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35425
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 3.75e1
  variant carriers: 0
hgvs: c.1153-5G>C
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

2-152554171-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554171
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554170
    reference: chr 2
allele count: 4
allele frequency: 3.536380514543365e-5
allele num: 113110
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1153-10delT
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1153-10delT
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1153-10delT
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.52-10delT
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1153-10delT
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1153-10delT
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1153-10delT
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4514
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14030
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23192
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5184
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7246
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1395
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4138
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: GA
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-152554204-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554204
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554204
    reference: chr 2
allele count: 1
allele frequency: 9.483706991388795e-6
allele num: 105444
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1153-42G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1153-42G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.52-42G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1153-42G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1153-42G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1153-42G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1153-42G>A
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13799
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13180
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5792
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6947
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4310
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10434
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

2-152554206-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554206
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554206
    reference: chr 2
allele count: 1
allele frequency: 9.587911561103761e-6
allele num: 104298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1153-44G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1153-44G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1153-44G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1153-44G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1153-44G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1153-44G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.52-44G>A
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12972
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13704
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6097
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1329
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1656
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2130
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8928
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6978
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3330
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2668
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

2-152554207-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554207
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554207
    reference: chr 2
allele count: 2
allele frequency: 1.930725566667954e-5
allele num: 103588
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1153-45G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1153-45G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1153-45G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1153-45G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1153-45G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1153-45G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.52-45G>C
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13666
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12829
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1874
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2132
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2778
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3640
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1447
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4310
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

2-152554207-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554207
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554207
    reference: chr 2
allele count: 4
allele frequency: 3.861451133335908e-5
allele num: 103588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1153-45G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1153-45G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1153-45G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1153-45G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1153-45G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1153-45G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.52-45G>A
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12829
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13666
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1874
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6022
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3640
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2132
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

2-152554210-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554210
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554210
    reference: chr 2
allele count: 3
allele frequency: 2.930889622696809e-5
allele num: 102358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1153-48G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.52-48G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1153-48G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1153-48G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1153-48G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1153-48G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1153-48G>A
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6779
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12644
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13387
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2910
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4322
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2623
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4363
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7074
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2792
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
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genotype quality: GenotypeQuality
  all individuals: 816
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8979
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-152554211-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152554211
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152554211
    reference: chr 2
allele count: 1
allele frequency: 9.910409894553239e-6
allele num: 100904
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1153-49C>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1153-49C>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1153-49C>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.52-49C>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1153-49C>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1153-49C>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1153-49C>G
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13307
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1676
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3183
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6066
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2105
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3078
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4473
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/2-152563345-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563345
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563345
    reference: chr 2
allele count: 1
allele frequency: 3.027000847560237e-5
allele num: 33036
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1152+50T>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1152+50T>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1152+50T>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1152+50T>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.51+50T>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1152+50T>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1152+50T>G
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22250
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4607
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3228
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7905
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3236
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6791
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1862
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

2-152563346-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563346
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563346
    reference: chr 2
allele count: 1
allele frequency: 3.024620410138528e-5
allele num: 33062
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.51+49A>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1152+49A>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1152+49A>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1152+49A>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1152+49A>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1152+49A>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1152+49A>T
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22018
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8238
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6649
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14735
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3284
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1642
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

2-152563346-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563346
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563346
    reference: chr 2
allele count: 614
allele frequency: 1.857116931825056e-2
allele num: 33062
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1152+49A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1152+49A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1152+49A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1152+49A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1152+49A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1152+49A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.51+49A>G
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 1.25e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 6.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 2.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 20133
  bin: 7.5e0
  variant carriers: 417
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 9.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 22018
  bin: 2.5e0
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 1.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 3.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 7.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 8639
  bin: 1.75e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 1642
  bin: 2.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 14735
  bin: 7.5e0
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 8238
  bin: 2.25e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 8.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 4851
  bin: 9.75e1
  variant carriers: 680
genotype quality: GenotypeQuality
  all individuals: 3270
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 5.25e1
  variant carriers: 43
num of homozygotes: 7
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

2-152563355-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563355
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563355
    reference: chr 2
allele count: 1
allele frequency: 3.010597302504817e-5
allele num: 33216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1152+40G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.51+40G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1152+40G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1152+40G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1152+40G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1152+40G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1152+40G>A
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21381
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21047
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1841
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4304
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1821
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16388
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

2-152563363-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563363
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563363
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 34332
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.51+32C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1152+32C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1152+32C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1152+32C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1152+32C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1152+32C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1152+32C>T
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18360
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23971
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4294
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15497
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3877
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2771
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

2-152563374-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563374
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563374
    reference: chr 2
allele count: 1
allele frequency: 2.740476842970677e-5
allele num: 36490
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.51+21G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1152+21G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1152+21G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1152+21G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1152+21G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1152+21G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1152+21G>A
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12965
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1970
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25736
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1767
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5491
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4302
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ

2-152563380-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563380
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563380
    reference: chr 2
allele count: 1
allele frequency: 2.600509699901181e-5
allele num: 38454
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1152+15G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1152+15G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1152+15G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.51+15G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1152+15G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1152+15G>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1152+15G>C
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4071
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27910
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1665
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1426
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1616
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

2-152563390-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563390
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563390
    reference: chr 2
allele count: 14
allele frequency: 3.220760099383455e-4
allele num: 43468
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1152+5G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1152+5G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1152+5G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1152+5G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1152+5G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1152+5G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.51+5G>A
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6745
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6051
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 32211
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8964
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5787
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1286
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 7.75e1
  variant carriers: 0
hgvs: c.1152+5G>A
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

http://identifiers.org/exac.variant/2-152563394-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563394
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563394
    reference: chr 2
allele count: 1
allele frequency: 2.15016771308162e-5
allele num: 46508
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: splice_donor_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1152+1G>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.51+1G>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: splice_donor_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1152+1G>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: splice_donor_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1152+1G>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: splice_donor_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1152+1G>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: splice_donor_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1152+1G>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: splice_donor_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1152+1G>T
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: splice donor
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4710
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32044
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8396
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10908
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4595
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1152+1G>T
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum

2-152563395-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563395
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563395
    reference: chr 2
allele count: 2
allele frequency: 4.203976962206247e-5
allele num: 47574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1152C>T
  hgvsp: ENST00000427231.2:c.1152C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1152C>T
  hgvsp: ENST00000604864.1:c.1152C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.51C>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1152C>T
  hgvsp: ENST00000409198.1:c.1152C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1152C>T
  hgvsp: ENST00000172853.10:c.1152C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1152C>T
  hgvsp: ENST00000397345.3:c.1152C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1152C>T
  hgvsp: ENST00000603639.1:c.1152C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31141
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1152C>T
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

2-152563407-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563407
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563407
    reference: chr 2
allele count: 2
allele frequency: 3.46092614383609e-5
allele num: 57788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.39T>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1140T>C
  hgvsp: ENST00000604864.1:c.1140T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1140T>C
  hgvsp: ENST00000172853.10:c.1140T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1140T>C
  hgvsp: ENST00000397345.3:c.1140T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1140T>C
  hgvsp: ENST00000409198.1:c.1140T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1140T>C
  hgvsp: ENST00000603639.1:c.1140T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1140T>C
  hgvsp: ENST00000427231.2:c.1140T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29024
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1645
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4304
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 29272
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2293
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp380Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

2-152563419-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563419
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563419
    reference: chr 2
allele count: 1
allele frequency: 1.576690211907164e-5
allele num: 63424
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1128G>A
  hgvsp: ENST00000409198.1:c.1128G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1128G>A
  hgvsp: ENST00000397345.3:c.1128G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1128G>A
  hgvsp: ENST00000603639.1:c.1128G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1128G>A
  hgvsp: ENST00000427231.2:c.1128G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1128G>A
  hgvsp: ENST00000604864.1:c.1128G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1128G>A
  hgvsp: ENST00000172853.10:c.1128G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.27G>A
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1680
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18447
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Lys376Lys
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-152563424-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563424
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563424
    reference: chr 2
allele count: 1
allele frequency: 1.540072691431036e-5
allele num: 64932
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1123C>T
  hgvsp: ENST00000397345.3:c.1123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1123C>T
  hgvsp: ENST00000604864.1:c.1123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1123C>T
  hgvsp: ENST00000603639.1:c.1123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1123C>T
  hgvsp: ENST00000172853.10:c.1123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1123C>T
  hgvsp: ENST00000409198.1:c.1123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1123C>T
  hgvsp: ENST00000427231.2:c.1123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.22C>T
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16162
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1559
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1738
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu375Leu
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/2-152563425-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563425
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563425
    reference: chr 2
allele count: 1
allele frequency: 1.533789380042332e-5
allele num: 65198
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1122G>T
  hgvsp: ENSP00000380505.3:p.Gln374His
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1122G>T
  hgvsp: ENSP00000474498.1:p.Gln374His
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1122G>T
  hgvsp: ENSP00000416578.2:p.Gln374His
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1122G>T
  hgvsp: ENSP00000386259.1:p.Gln374His
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1122G>T
  hgvsp: ENSP00000172853.10:p.Gln374His
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.21G>T
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1122G>T
  hgvsp: ENSP00000473894.1:p.Gln374His
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4376
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26035
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1731
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln374His
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

2-152563428-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563428
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563428
    reference: chr 2
allele count: 13
allele frequency: 1.956299283693493e-4
allele num: 66452
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1119G>A
  hgvsp: ENST00000604864.1:c.1119G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1119G>A
  hgvsp: ENST00000409198.1:c.1119G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1119G>A
  hgvsp: ENST00000397345.3:c.1119G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1119G>A
  hgvsp: ENST00000427231.2:c.1119G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1119G>A
  hgvsp: ENST00000603639.1:c.1119G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.18G>A
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1119G>A
  hgvsp: ENST00000172853.10:c.1119G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4447
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16785
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25551
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19703
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26700
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4314
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg373Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

2-152563430-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563430
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563430
    reference: chr 2
allele count: 1
allele frequency: 1.494053666407697e-5
allele num: 66932
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1117A>G
  hgvsp: ENSP00000416578.2:p.Arg373Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1117A>G
  hgvsp: ENSP00000386259.1:p.Arg373Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1117A>G
  hgvsp: ENSP00000474498.1:p.Arg373Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1117A>G
  hgvsp: ENSP00000473894.1:p.Arg373Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1117A>G
  hgvsp: ENSP00000172853.10:p.Arg373Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183091
  ensembl transcript: ENST00000489048
  gene symbol: NEB
  hgvsc: ENST00000489048.1:n.16A>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1117A>G
  hgvsp: ENSP00000380505.3:p.Arg373Gly
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26633
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg373Gly
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

2-152563446-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563446
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563446
    reference: chr 2
allele count: 2
allele frequency: 3.002011347602894e-5
allele num: 66622
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1101A>G
  hgvsp: ENST00000427231.2:c.1101A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1101A>G
  hgvsp: ENST00000604864.1:c.1101A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1101A>G
  hgvsp: ENST00000409198.1:c.1101A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1101A>G
  hgvsp: ENST00000397345.3:c.1101A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1101A>G
  hgvsp: ENST00000172853.10:c.1101A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1101A>G
  hgvsp: ENST00000603639.1:c.1101A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25251
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18703
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27835
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1742
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1738
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser367Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/2-152563459-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563459
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563459
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 62450
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1088T>G
  hgvsp: ENSP00000386259.1:p.Val363Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1088T>G
  hgvsp: ENSP00000172853.10:p.Val363Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1088T>G
  hgvsp: ENSP00000473894.1:p.Val363Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1088T>G
  hgvsp: ENSP00000474498.1:p.Val363Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1088T>G
  hgvsp: ENSP00000416578.2:p.Val363Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1088T>G
  hgvsp: ENSP00000380505.3:p.Val363Gly
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26213
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14395
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2850
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val363Gly
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

2-152563461-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563461
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563461
    reference: chr 2
allele count: 1
allele frequency: 1.628028132326127e-5
allele num: 61424
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1086T>C
  hgvsp: ENST00000603639.1:c.1086T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1086T>C
  hgvsp: ENST00000409198.1:c.1086T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1086T>C
  hgvsp: ENST00000172853.10:c.1086T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1086T>C
  hgvsp: ENST00000397345.3:c.1086T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1086T>C
  hgvsp: ENST00000604864.1:c.1086T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1086T>C
  hgvsp: ENST00000427231.2:c.1086T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13433
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3169
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4300
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30886
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn362Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-152563469-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563469
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563469
    reference: chr 2
allele count: 1
allele frequency: 1.729385722191477e-5
allele num: 57824
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1078G>A
  hgvsp: ENSP00000474498.1:p.Asp360Asn
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1078G>A
  hgvsp: ENSP00000172853.10:p.Asp360Asn
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1078G>A
  hgvsp: ENSP00000473894.1:p.Asp360Asn
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1078G>A
  hgvsp: ENSP00000380505.3:p.Asp360Asn
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1078G>A
  hgvsp: ENSP00000416578.2:p.Asp360Asn
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1078G>A
  hgvsp: ENSP00000386259.1:p.Asp360Asn
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4648
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4075
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26416
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4300
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10405
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4811
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp360Asn
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum

2-152563488-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563488
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563488
    reference: chr 2
allele count: 1
allele frequency: 2.037905033625433e-5
allele num: 49070
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1059A>C
  hgvsp: ENSP00000474498.1:p.Glu353Asp
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1059A>C
  hgvsp: ENSP00000416578.2:p.Glu353Asp
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1059A>C
  hgvsp: ENSP00000172853.10:p.Glu353Asp
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1059A>C
  hgvsp: ENSP00000473894.1:p.Glu353Asp
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1059A>C
  hgvsp: ENSP00000380505.3:p.Glu353Asp
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1059A>C
  hgvsp: ENSP00000386259.1:p.Glu353Asp
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24666
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9414
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10774
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1338
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu353Asp
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

2-152563495-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563495
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563495
    reference: chr 2
allele count: 2
allele frequency: 4.2865103519225e-5
allele num: 46658
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1052A>C
  hgvsp: ENSP00000416578.2:p.Asp351Ala
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1052A>C
  hgvsp: ENSP00000380505.3:p.Asp351Ala
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1052A>C
  hgvsp: ENSP00000473894.1:p.Asp351Ala
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1052A>C
  hgvsp: ENSP00000386259.1:p.Asp351Ala
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1052A>C
  hgvsp: ENSP00000172853.10:p.Asp351Ala
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1052A>C
  hgvsp: ENSP00000474498.1:p.Asp351Ala
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12702
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28158
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4298
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5455
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13057
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp351Ala
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

2-152563498-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563498
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563498
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 44910
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1049A>G
  hgvsp: ENSP00000416578.2:p.Glu350Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1049A>G
  hgvsp: ENSP00000386259.1:p.Glu350Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1049A>G
  hgvsp: ENSP00000473894.1:p.Glu350Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1049A>G
  hgvsp: ENSP00000172853.10:p.Glu350Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1049A>G
  hgvsp: ENSP00000380505.3:p.Glu350Gly
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1049A>G
  hgvsp: ENSP00000474498.1:p.Glu350Gly
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22804
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8779
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14692
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1839
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26719
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu350Gly
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP

2-152563502-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563502
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563502
    reference: chr 2
allele count: 8
allele frequency: 1.842978252856616e-4
allele num: 43408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1045A>C
  hgvsp: ENSP00000474498.1:p.Lys349Gln
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1045A>C
  hgvsp: ENSP00000172853.10:p.Lys349Gln
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1045A>C
  hgvsp: ENSP00000386259.1:p.Lys349Gln
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1045A>C
  hgvsp: ENSP00000416578.2:p.Lys349Gln
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1045A>C
  hgvsp: ENSP00000473894.1:p.Lys349Gln
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1045A>C
  hgvsp: ENSP00000380505.3:p.Lys349Gln
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15782
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2895
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8454
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22007
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4643
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25816
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16232
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Lys349Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

2-152563520-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563520
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563520
    reference: chr 2
allele count: 1
allele frequency: 2.933755794167693e-5
allele num: 34086
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1036-9C>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1036-9C>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1036-9C>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1036-9C>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1036-9C>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1036-9C>G
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3381
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25419
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/2-152563523-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563523
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563523
    reference: chr 2
allele count: 0
allele frequency: 0.0e0
allele num: 32280
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1036-12T>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1036-12T>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1036-12T>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1036-12T>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1036-12T>G
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1036-12T>G
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4680
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14692
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26757
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26880
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3278
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1458
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14446
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

2-152563534-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 152563534
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 152563534
    reference: chr 2
allele count: 1
allele frequency: 3.527834615113243e-5
allele num: 28346
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000380505
  ensembl transcript: ENST00000397345
  gene symbol: NEB
  hgvsc: ENST00000397345.3:c.1036-23A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000474498
  ensembl transcript: ENST00000604864
  gene symbol: NEB
  hgvsc: ENST00000604864.1:c.1036-23A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000172853
  ensembl transcript: ENST00000172853
  gene symbol: NEB
  hgvsc: ENST00000172853.10:c.1036-23A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000473894
  ensembl transcript: ENST00000603639
  gene symbol: NEB
  hgvsc: ENST00000603639.1:c.1036-23A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000416578
  ensembl transcript: ENST00000427231
  gene symbol: NEB
  hgvsc: ENST00000427231.2:c.1036-23A>C
  variant of: http://identifiers.org/hgnc/7720
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183091
  ensembl protein: ENSP00000386259
  ensembl transcript: ENST00000409198
  gene symbol: NEB
  hgvsc: ENST00000409198.1:c.1036-23A>C
  variant of: http://identifiers.org/hgnc/7720
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11573
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 29576
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 161
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1381
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500780405811022e-5
allele num: 66632
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020616452337212e-4
allele num: 9798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.39e-1

DP
type: SiteQuality
SIO_000300: 1.816392e6

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.354e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.419e0

GenotypeQuality
all individuals: 163
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 5018
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501095799933952e-5
allele num: 66618
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.815686e6

MQ
type: SiteQuality
SIO_000300: 5.978e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-1

QD
type: SiteQuality
SIO_000300: 1.587e1

FS
type: SiteQuality
SIO_000300: 3.312e0

VQSLOD
type: SiteQuality
SIO_000300: 7.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

GenotypeQuality
all individuals: 230
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1300
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GenotypeQuality
all individuals: 832
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501817198810561e-5
allele num: 66586
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.14e0

VQSLOD
type: SiteQuality
SIO_000300: -2.654e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-1

FS
type: SiteQuality
SIO_000300: 5.684e0

QD
type: SiteQuality
SIO_000300: 1.505e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.811267e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.41e-1

GenotypeQuality
all individuals: 384
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variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 43432
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502178158329578e-5
allele num: 66570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

QD
type: SiteQuality
SIO_000300: 1.255e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.791e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e-1

DP
type: SiteQuality
SIO_000300: 1.811688e6

GenotypeQuality
all individuals: 268
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 53

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 38
allele frequency: 3.880718954248366e-3
allele num: 9792
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.919218128351496e-4
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.020386072523904e-5
allele num: 66516
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163061177017911e-4
allele num: 8598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

QD
type: SiteQuality
SIO_000300: 1.106e1

FS
type: SiteQuality
SIO_000300: 5.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.32e0

DP
type: SiteQuality
SIO_000300: 1.814779e6

MQ
type: SiteQuality
SIO_000300: 6.01e1

GenotypeQuality
all individuals: 1356
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 382
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16372
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.021033285685113e-4
allele num: 9794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.433e1

MQRankSum
type: SiteQuality
SIO_000300: -1.053e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

FS
type: SiteQuality
SIO_000300: 4.125e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.713e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.41e-1

DP
type: SiteQuality
SIO_000300: 1.813196e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeQuality
all individuals: 355
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 529
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 381
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variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50177209106746e-5
allele num: 66588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.687e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.815149e6

VQSLOD
type: SiteQuality
SIO_000300: -5.516e-1

QD
type: SiteQuality
SIO_000300: 8.19e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: -1.119e0

FS
type: SiteQuality
SIO_000300: 1.284e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.28e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1293
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501456412720339e-5
allele num: 66602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.855e0

QD
type: SiteQuality
SIO_000300: 1.348e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.412e0

FS
type: SiteQuality
SIO_000300: 5.847e0

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

DP
type: SiteQuality
SIO_000300: 1.815092e6

MQ
type: SiteQuality
SIO_000300: 5.976e1

GenotypeQuality
all individuals: 233
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1351
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 122
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GenotypeQuality
all individuals: 254
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66614
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.442598925256473e-4
allele num: 16376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 3.598e0

MQRankSum
type: SiteQuality
SIO_000300: 4.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e-1

QD
type: SiteQuality
SIO_000300: 1.422e1

DP
type: SiteQuality
SIO_000300: 1.815549e6

VQSLOD
type: SiteQuality
SIO_000300: 9.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

GenotypeQuality
all individuals: 258
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 11

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 270
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GenotypeQuality
all individuals: 379
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 1.122678097570933e-3
allele num: 9798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

FS
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.398e0

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

MQ
type: SiteQuality
SIO_000300: 5.989e1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.407e1

GenotypeQuality
all individuals: 376
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
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GenotypeQuality
all individuals: 5334
bin: 9.75e1
variant carriers: 126

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 820
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GenotypeQuality
all individuals: 255
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 228
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GenotypeQuality
all individuals: 270
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.222792858889704e-4
allele num: 16356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 1.037344398340249e-3
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 105
allele frequency: 1.071647274954072e-2
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.504127269998499e-5
allele num: 66630
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.232142857142857e-3
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

DP
type: SiteQuality
SIO_000300: 1.824704e6

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.49e-2

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

FS
type: SiteQuality
SIO_000300: 5.669999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.13e-1

QD
type: SiteQuality
SIO_000300: 1.466e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 376
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variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.13e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

FS
type: SiteQuality
SIO_000300: 5.669999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.466e1

DP
type: SiteQuality
SIO_000300: 1.824704e6

MQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.49e-2

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.112469437652811e-5
allele num: 16360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.663e0

MQRankSum
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SIO_000300: 1.49e-1

FS
type: SiteQuality
SIO_000300: 2.85e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.818631e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.82e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 216
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.126700159294204e-5
allele num: 16322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.127e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.133e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQ
type: SiteQuality
SIO_000300: 5.89e1

VQSLOD
type: SiteQuality
SIO_000300: -2.059e-1

DP
type: SiteQuality
SIO_000300: 1.819336e6

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4948
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variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.34e-1

QD
type: SiteQuality
SIO_000300: 1.184e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.6e-1

FS
type: SiteQuality
SIO_000300: 4.201e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

MQRankSum
type: SiteQuality
SIO_000300: -6.07e-1

DP
type: SiteQuality
SIO_000300: 1.819662e6

GenotypeQuality
all individuals: 306
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1317
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5235
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 190
bin: 3.25e1
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GenotypeQuality
all individuals: 79
bin: 4.25e1
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GenotypeQuality
all individuals: 1361
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GenotypeQuality
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GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 824
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

FS
type: SiteQuality
SIO_000300: 1.388e1

VQSLOD
type: SiteQuality
SIO_000300: -1.701e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.18e-2

QD
type: SiteQuality
SIO_000300: 1.423e1

MQ
type: SiteQuality
SIO_000300: 5.964e1

MQRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

DP
type: SiteQuality
SIO_000300: 1.820685e6

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020408163265306e-4
allele num: 9800
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.4e-1

QD
type: SiteQuality
SIO_000300: 1.491e1

VQSLOD
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 1.821969e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.89e-1

FS
type: SiteQuality
SIO_000300: 2.372e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

MQ
type: SiteQuality
SIO_000300: 5.891e1

GenotypeQuality
all individuals: 377
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500195025353296e-5
allele num: 66658
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.45e-1

FS
type: SiteQuality
SIO_000300: 2.245e0

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -6.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.19e-1

QD
type: SiteQuality
SIO_000300: 1.448e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-2

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.82289e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
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East Asian
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allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

Other
type: Population
allele count: 0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.824916e6

VQSLOD
type: SiteQuality
SIO_000300: 8.05e-1

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.361e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.568e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.102040816326531e-4
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
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Other
type: Population
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allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.66e-1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.826821e6

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.110975311659741e-5
allele num: 16364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.827072e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.409e0

VQSLOD
type: SiteQuality
SIO_000300: 8.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.17e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

MQRankSum
type: SiteQuality
SIO_000300: -2.97e-1

FS
type: SiteQuality
SIO_000300: 1.131e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

QD
type: SiteQuality
SIO_000300: 1.054e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999940001199976e-5
allele num: 66668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.328e-1

FS
type: SiteQuality
SIO_000300: 4.244e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

DP
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SIO_000300: 1.827242e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.344e0

QD
type: SiteQuality
SIO_000300: 9.949999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 1.56e0

MQ
type: SiteQuality
SIO_000300: 5.898e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.67e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQ
type: SiteQuality
SIO_000300: 5.93e1

DP
type: SiteQuality
SIO_000300: 1.827329e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.798e0

QD
type: SiteQuality
SIO_000300: 7.21e0

VQSLOD
type: SiteQuality
SIO_000300: -3.877e-1

FS
type: SiteQuality
SIO_000300: 8.95e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16318
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.50112528132033e-5
allele num: 66650
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.020408163265306e-4
allele num: 9800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.320774282751469e-4
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.116e0

QD
type: SiteQuality
SIO_000300: 1.146e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.458e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 1.827483e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.26e0

MQRankSum
type: SiteQuality
SIO_000300: -1.36e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 525
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500510173458976e-5
allele num: 66644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16304
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.64e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.04e-1

FS
type: SiteQuality
SIO_000300: 4.428e0

QD
type: SiteQuality
SIO_000300: 1.425e1

DP
type: SiteQuality
SIO_000300: 1.826857e6

VQSLOD
type: SiteQuality
SIO_000300: -1.674e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 377
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variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 4.320774282751469e-4
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001380635092142e-5
allele num: 66636
num of homozygotes: 0

African
type: Population
allele count: 39
allele frequency: 3.979591836734694e-3
allele num: 9800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.135722174499939e-5
allele num: 16298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.73e-1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16288
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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FS
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MQ
type: SiteQuality
SIO_000300: 5.92e1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.93e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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MQRankSum
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66630
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East Asian
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allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

African
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Latino
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num of homozygotes: 0

South Asian
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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DP
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FS
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16232
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

QD
type: SiteQuality
SIO_000300: 1.144e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.034e0

DP
type: SiteQuality
SIO_000300: 1.823894e6

VQSLOD
type: SiteQuality
SIO_000300: 4.57e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.323e0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 5207
bin: 9.75e1
variant carriers: 6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.007449237053947e-5
allele num: 66584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.023888720895071e-4
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.822961e6

FS
type: SiteQuality
SIO_000300: 4.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.879999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

QD
type: SiteQuality
SIO_000300: 1.349e1

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 821
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66572
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.063725490196078e-4
allele num: 9792
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16146
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

QD
type: SiteQuality
SIO_000300: 9.890000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.491e0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 1.101e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.63e-1

DP
type: SiteQuality
SIO_000300: 1.822211e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e0

GenotypeQuality
all individuals: 5211
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 820
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.06435137895812e-4
allele num: 9790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16024
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.804619826756497e-4
allele num: 66496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

DP
type: SiteQuality
SIO_000300: 1.819259e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 1.407e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.95e-1

FS
type: SiteQuality
SIO_000300: 6.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.6e0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 379
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GenotypeQuality
all individuals: 1333
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508523155830442e-5
allele num: 66290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15794
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

FS
type: SiteQuality
SIO_000300: 5.244e0

DP
type: SiteQuality
SIO_000300: 1.810683e6

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.05e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.34e1

GenotypeQuality
all individuals: 814
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4814
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 233
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GenotypeQuality
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GenotypeQuality
all individuals: 115
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 524
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9758
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15656
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.562008469449486e-5
allele num: 66120
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

FS
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 1.803196e6

VQSLOD
type: SiteQuality
SIO_000300: 2.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e-1

QD
type: SiteQuality
SIO_000300: 1.488e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1326
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66054
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.420958006934635e-5
allele num: 15574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.78e0

MQRankSum
type: SiteQuality
SIO_000300: -2.05e-1

QD
type: SiteQuality
SIO_000300: 1.401e1

VQSLOD
type: SiteQuality
SIO_000300: 3.0e-2

FS
type: SiteQuality
SIO_000300: 7.863e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.799067e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.563e0

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 267
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 7.580351728320194e-4
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8360
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539408866995074e-5
allele num: 64960
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
SIO_000300: 1.402e1

DP
type: SiteQuality
SIO_000300: 1.75074e6

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -4.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.554e0

MQRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.519e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.564210855623338e-5
allele num: 63930
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
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allele num: 11200
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

FS
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -7.909e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.506e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

DP
type: SiteQuality
SIO_000300: 1.706011e6

GenotypeQuality
all individuals: 210
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.168883747831116e-4
allele num: 13832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8050
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.583230423355815e-5
allele num: 63162
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.73e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
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MQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10801
bin: 2.25e1
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GenotypeQuality
all individuals: 2221
bin: 6.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59122
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12102
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.339764201500536e-4
allele num: 7464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.032e1

DP
type: SiteQuality
SIO_000300: 1.44808e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.599e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.13e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.33e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.91e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.079447322970639e-4
allele num: 9264
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10062
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11860
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.093e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.159e0

DP
type: SiteQuality
SIO_000300: 1.443118e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 1.79e0

MQRankSum
type: SiteQuality
SIO_000300: -1.63e-1

QD
type: SiteQuality
SIO_000300: 1.068e1

MQ
type: SiteQuality
SIO_000300: 5.886e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.726281352235551e-4
allele num: 7336
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9982
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11756
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.440586e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.66e-1

QD
type: SiteQuality
SIO_000300: 1.504e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.35e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11756
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58084
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.007212983370066e-4
allele num: 9982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.504e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.35e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.66e-1

DP
type: SiteQuality
SIO_000300: 1.440586e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9208
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.230125523012552e-5
allele num: 57360
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7246
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.15e1

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.45e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.433218e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9150
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.767533936651584e-5
allele num: 56576
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.435e0

QD
type: SiteQuality
SIO_000300: 9.92e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.430648e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.164e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15470
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.659574468085106e-4
allele num: 3760
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2416
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 320
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.338e1

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.12e-1

MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-1

DP
type: SiteQuality
SIO_000300: 8.06148e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3766
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2420
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 320
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 5.417118093174431e-4
allele num: 1846
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.35e-2

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 40

GenotypeQuality
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variant carriers: 54

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 1.858736059479554e-3
allele num: 3766
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 9.375e-3
allele num: 320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 345
allele frequency: 2.228970151182323e-2
allele num: 15478
num of homozygotes: 1

South Asian
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allele count: 218
allele frequency: 2.609528369643285e-2
allele num: 8354
num of homozygotes: 5

European (Finnish)
type: Population
allele count: 37
allele frequency: 1.528925619834711e-2
allele num: 2420
num of homozygotes: 1

Latino
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allele count: 4
allele frequency: 4.555808656036446e-3
allele num: 878
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

DP
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.99e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.35e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 715
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1890
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3764
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.419309282321222e-5
allele num: 15578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2414
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.829e1

DP
type: SiteQuality
SIO_000300: 8.14972e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.067e0

VQSLOD
type: SiteQuality
SIO_000300: -2.623e0

MQRankSum
type: SiteQuality
SIO_000300: -1.031e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.17e-2

QD
type: SiteQuality
SIO_000300: 1.123e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 962
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3920
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.2e-1

QD
type: SiteQuality
SIO_000300: 1.104e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.79e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.42219e5

VQSLOD
type: SiteQuality
SIO_000300: -1.501e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1106
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17368
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.163602513381429e-4
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2302
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.421e0

MQRankSum
type: SiteQuality
SIO_000300: -1.807e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.98e-1

DP
type: SiteQuality
SIO_000300: 8.89102e5

ClippingRankSum
type: SiteQuality
SIO_000300: 9.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.12e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.112e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.43e0

QD
type: SiteQuality
SIO_000300: 1.415e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2542
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.263467632412856e-4
allele num: 4418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 354
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.18912e5

MQ
type: SiteQuality
SIO_000300: 5.616e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.81e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.26e-1

QD
type: SiteQuality
SIO_000300: 4.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.29e0

VQSLOD
type: SiteQuality
SIO_000300: -1.508e0

GenotypeQuality
all individuals: 188
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4316
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 144
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3012
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5052
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 6.614381555324578e-4
allele num: 21166
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.584e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

FS
type: SiteQuality
SIO_000300: 6.03e-1

QD
type: SiteQuality
SIO_000300: 1.266e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.23e-2

DP
type: SiteQuality
SIO_000300: 9.82949e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.05e0

MQRankSum
type: SiteQuality
SIO_000300: -1.94e-1

GenotypeQuality
all individuals: 288
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 538
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variant carriers: 0

GenotypeQuality
all individuals: 4302
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 607
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 148
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GenotypeQuality
all individuals: 735
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1944
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3176
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.390972161236498e-5
allele num: 22774
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e0

QD
type: SiteQuality
SIO_000300: 2.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

DP
type: SiteQuality
SIO_000300: 1.014743e6

VQSLOD
type: SiteQuality
SIO_000300: -3.185e0

MQRankSum
type: SiteQuality
SIO_000300: 6.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.92e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1460
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GenotypeQuality
all individuals: 11210
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2036
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.539709649871905e-5
allele num: 23420
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.599999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.397e1

VQSLOD
type: SiteQuality
SIO_000300: -2.434e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

FS
type: SiteQuality
SIO_000300: 6.082e0

DP
type: SiteQuality
SIO_000300: 1.024679e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.67e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.73e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3742
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 6.086427267194157e-4
allele num: 3286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4584
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 29162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.11148e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.73e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.495e0

QD
type: SiteQuality
SIO_000300: 8.83e0

VQSLOD
type: SiteQuality
SIO_000300: 5.7e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4056
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6814
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4012
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10494
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European (Non-Finnish)
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allele count: 1
allele frequency: 3.078438615933998e-5
allele num: 32484
num of homozygotes: 0

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.0e-1

DP
type: SiteQuality
SIO_000300: 1.160076e6

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6918
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 9.442870632672332e-5
allele num: 10590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4252
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4104
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MQ
type: SiteQuality
SIO_000300: 5.983e1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.88e0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

FS
type: SiteQuality
SIO_000300: 6.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.489e0

DP
type: SiteQuality
SIO_000300: 1.170223e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 859
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.337540906965872e-4
allele num: 4278
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5152
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

DP
type: SiteQuality
SIO_000300: 1.173075e6

VQSLOD
type: SiteQuality
SIO_000300: -1.149e0

QD
type: SiteQuality
SIO_000300: 6.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.898e0

GenotypeQuality
all individuals: 593
bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 3.786113699906803e-4
allele num: 34336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.106e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

FS
type: SiteQuality
SIO_000300: 5.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.545e0

VQSLOD
type: SiteQuality
SIO_000300: 2.2e0

DP
type: SiteQuality
SIO_000300: 1.181703e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.44e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 450
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variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 2.225189141076991e-4
allele num: 4494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4218
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.88e0

MQ
type: SiteQuality
SIO_000300: 5.854e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.157e0

FS
type: SiteQuality
SIO_000300: 1.496e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

DP
type: SiteQuality
SIO_000300: 1.183493e6

QD
type: SiteQuality
SIO_000300: 8.15e0

GenotypeQuality
all individuals: 583
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4302
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 450
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variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5200
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34446
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.86219739292365e-4
allele num: 10740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.171194e6

FS
type: SiteQuality
SIO_000300: 1.922e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.738e0

MQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.221e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.68e-1

QD
type: SiteQuality
SIO_000300: 1.216e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 135
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4299
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 292
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variant carriers: 0

GenotypeQuality
all individuals: 1575
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4000
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3968
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4866
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

DP
type: SiteQuality
SIO_000300: 1.112799e6

QD
type: SiteQuality
SIO_000300: 1.358e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.93e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 276
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 771
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GenotypeQuality
all individuals: 1560
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variant carriers: 0

GenotypeQuality
all individuals: 447
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variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.177831447820008e-5
allele num: 31468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10408
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.167e0

VQSLOD
type: SiteQuality
SIO_000300: 5.600000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.099045e6

QD
type: SiteQuality
SIO_000300: 9.69e0

MQRankSum
type: SiteQuality
SIO_000300: -3.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.317e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.42e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.27894257064722e-4
allele num: 4388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 29414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6222
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.08e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.051149e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.147e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.093e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4300
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 1.89753320683112e-4
allele num: 5270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9546
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.415e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.031e0

DP
type: SiteQuality
SIO_000300: 9.47359e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

QD
type: SiteQuality
SIO_000300: 8.73e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

MQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.05e-2

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23100
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3092
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2318
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.12630236019562e-4
allele num: 9406
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.93e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.42e-2

FS
type: SiteQuality
SIO_000300: 2.083e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.62e-1

DP
type: SiteQuality
SIO_000300: 9.19281e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 1.356e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2998
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22072
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.537e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.69e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.762e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.88e-1

MQ
type: SiteQuality
SIO_000300: 4.596e1

QD
type: SiteQuality
SIO_000300: 5.87e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 9.00609e5

GenotypeQuality
all individuals: 1276
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4303
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 446
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21220
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 1.683501683501683e-3
allele num: 4752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2978
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1972
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.98e-2

QD
type: SiteQuality
SIO_000300: 1.475e1

VQSLOD
type: SiteQuality
SIO_000300: 5.26e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.84721e5

GenotypeQuality
all individuals: 1399
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4296
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16434
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.169864295741694e-4
allele num: 8548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15976
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1068
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

MQ
type: SiteQuality
SIO_000300: 5.766e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.688e0

DP
type: SiteQuality
SIO_000300: 7.90872e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-2

GenotypeQuality
all individuals: 1208
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1136
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 9.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14952
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 918
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3554
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.7335e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 6.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1